mRNA_H-paniculata_contig53.12690.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig53.12690.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 448 bits (1153), Expect = 4.170e-135 Identity = 301/815 (36.93%), Postives = 407/815 (49.94%), Query Frame = 1
Query: 2443 RAKSRMYDFGRKVQTMVDGEKKVGFACLATDFCRERSAGGAFISIGVGSSTNATDHLRRKHGCGKSEKSTLAEGTVVSRERRVFQARQSELYKTNKMRFLGLYWVRTNVIDQFAPLSSGESFDQQVLWSLTCHPEFPVTGLHRKAVKHKVIELYDATTRVVKERLREHVGSNCVSHVSFDLWADKGSTLKYRGIRLTEVTPDWELESRLLAVRPFNPKPEILNNNHLSGVLETYLKSVLEEFNLDISNVSSSTTDG--EVKRLGKELLPGQWEWCICHMLNCAVVEATGMHINPYKCKNQTARNLIATIKKTVEYIRKSPKTEGNFLAEQSELYSGFTRTKLKNAVPHRWSYLADVLGFVILNSEAIGATFAREGNKCPLAEWDNEIRELYSLVKPVAEIIANAQGTHVPTAPDIVLQLCALKMTTLNTTAPLKIRRPERSLAM----GASAAAEPSTPVMRAHTDLTEAARETRALFCRAIDWRWWDKRYGSLSGRDTDHQFDMQMMMHPATASLAHVDILCDDKERAAGIKEAITERVIKLAVELAEKEKEMEDLASNGKRCAPSGTGGDNETGRRGGMGADGSGGGGSSWSRDRRRYSDPSVVRGSRSGNDGRAGGSARGRGGRRVGPGVSEEEGNAGSGGAVSVRLSLGGKRDKAMLSAYTDLGLVRVA-ETRNTVPIVKTHEETVREELSDFLRIENCSL-DRVPLRHTLVFWKAHAGCFPYMARVARVVLGAPASAAVIERDFSAAGRMMTSCKRSTDTAWVELILFLHGNKELIPDNVPALTEEQALGAIPGRLRNPASDLQHLDGLF 4863
R+ S +Y +G KV+ G K FAC + FCR A G FI+IG ++NA DH++ +H G+ + + RFL + WV+ N+I+ F PLS GE + LT FP+TG+H KAVK + +G + H + DLW DK S+LKY GIRL W L SRL+AVR FNP E+L +N LS +L+ YL+SVLEE+ LD+S + S+T+D +VKRL LLPG WEWC+CHM+NCA+VEA G H++P K N AR +I T+KK VE+IRKSP+ + F EQ + Y+ KL NA P RWS + +VL VI+N AI + EG PL EI ELYS++KP A++I Q T VPT VL L ALK+ TLN +PL+I P R LA G P+T R H+ T A+ TR C ++DW W+DKRY S +DTD+ + P T + +T CA TG D T G AD +P+ R ++ A G + + KR++A + Y LGL + +N P + E+T R EL++ ++ SL + L +WK A +P +ARVARVV GAPASAAV+ERDFS AGRMMTS + + D+ +VE+I+FLHGN +LIP+++ LTE A IPGRL NP L+ LDG+F
Sbjct: 31 RSSSNIYKYGVKVKHKTSG--KWSFACFGSAFCRANVAKGIFIAIGEKPASNANDHIKAQHNAGEPCRLPCT--------------------PQDHARFLAMNWVKCNIIEGFCPLSHGEKEWVRASLKLTALKNFPITGIHNKAVK-------------------QMIGGMRLLHHNLDLWVDKFSSLKYIGIRLFYADRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDPAKSGNPGARKVITTVKKVVEHIRKSPRAKAIFEEEQVQQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAIDGVYTAEGKDSPLTSLTEEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQAETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRYKSAESQDTDY---VSTCRWPCT-------------------RPRLT--------------------------CAALHTG-DVSTTPAGSAAAD-----------------EPAAKRARQA----------------------------AAPGSVHPLFKAPVNKREEATTNMYASLGLFGPGGDEQNEEP--PSFEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAARTKIPGRLANPVERLEQLDGVF 708
BLAST of mRNA_H-paniculata_contig53.12690.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 433 bits (1113), Expect = 5.560e-129 Identity = 299/849 (35.22%), Postives = 426/849 (50.18%), Query Frame = 1
Query: 2392 LKRYLPVDGYDILAVPARAKSRMYDFGRKVQTMVDGEKKVGFACLATDFCRERSAGGAFISIGVGSSTNATDHLRRKHGCGKSEKSTLAEGTV---VSRERRVFQARQSELYKTNKMRFLGLYWVRTNVIDQFAPLSSGESFDQQVLWSLTCHPEFPVTGLHRKAVKHKVIELYDATTRVVKERLREHVGSNCVSHVSFDLWADKGSTLKYRGIRLTEVTPDWELESRLLAVRPFNPKPEILNNNHLSGVLETYLKSVLEEFNLDISNVSSSTTD--GEVKRLGKELLPGQWEWCICHMLNCAVVEATGMHINPYKCKNQTARNLIATIKKTVEYIRKSPKTEGNFLAEQSELYSGFTRTKLKNAVPHRWSYLADVLGFVILNSEAIGATFAREGNKCPLAEWDNEIRELYSLVKPVAEIIANAQGTHVPTAPDIVLQLCALKMTTLNTTAPLKIRRPERSLAMGAS--AAAEPSTPVMRAHTDLTEAARETRALFCRAIDWRWWDKRYGSLSGRDTDHQFDMQMMMHPATASLAHVDILCDDKERAAGIKEAITERVIKLAVELAEKEKEMEDLASNGKRCAPSGTGGDNETGRRGGMGADGSGGGGSSWSRDRRRYSDPSVVRGSRSGNDGRAGGSARGRGGRRVGPGVSEEEGNAGSGGAVSVRLSLGGKRDKAMLSAYTDLGLVRVA-ETRNTVPIVKTHEE--TVREELSDFLRIENCSLDRVPLRHTLVFWKAHAGCFPYMARVARVVLGAPASAAVIERDFSAAGRMMTSCKRSTDTAWVELILFLHGNKELIPDNVPALTEEQALGA---IPGRLRNPASDLQHLDGLFHTILDCGNGEDE 4899
+K + ++++ PARA S ++++G K++ G K FAC + CR RS G FI+I + +NA DH++ KHG G S A+ V + + +EL + L WV+ +VI+ +PL+ GE+ + L+ F + + ++ VK V+E Y AT KE + V H+S +LW DK S+LKY G+R V W+L+S LLAVR FNP PE L N LS +LE Y+ +VLEEF +D S + S+T+D G+VKRL LLPG EWC+CHML+ ++ EA G + P + + ARN++ +KK VE +RKSP ++ F EQ +S + K+ NA P RWS + L + N AI +A EG PL+ +EI ELYSL++PVAE+IA Q TH PT VL L ALK++TLN APL I P GA+ A E T RAH DLT RE R A+ WR +DKRY S + T FDMQM +HP TA L +V L + AA +K+ IT+++I LA +LA+K+ E + + + +P+ R ++ + G + S ++ + LGL+ E + PI + E T+R D L + S + V L +WK +P +ARVARVV APAS V ERD +AGRMMTS + + D +VE++LFLHGN +L+P+ +P L + G IPGRL NP +L LDG F + + E E
Sbjct: 1 MKEFEAPASHELVPKPARASSPIWNYGVKLKDRSRG--KWAFACFGSTVCRARSKNGVFIAISKRTGSNALDHVKHKHGAGASTNVISAQAMADLCVQKPSPFTRFFDNELSRA-------LEWVQRHVIECCSPLTLGETEGVKTSVLLSAR-SFAPSRIRKQEVKRMVVECYAATAAQFKEEMATEVAGVPCLHLSLELWVDKSSSLKYMGVRFFYVNSVWQLKSYLLAVRQFNPTPETLKNERLSELLEKYVFAVLEEFGIDASLLFSATSDAGGDVKRLCSVLLPGLREWCVCHMLSDSLAEAVGTCVGPQQPGGRAARNVVMAVKKAVERVRKSPASKDIFTEEQVIQFSQCSNRKVVNAAPQRWSGVTGALEATVTNRAAINGVYAEEGEDSPLSPHVHEIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGGEQRTTA-RAHKDLTRVGREAREHLASALHWRDFDKRYKSTVAKSTGLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADKKAERKGIEAE---------------------------------------QGEPAAKRAPQA----------------------------SAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASPIERARAELETLRSASDDAL-FGDTSCEGV-----LNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSNPMLELHALDGEFGPVDLTNDDESE 765
BLAST of mRNA_H-paniculata_contig53.12690.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 417 bits (1073), Expect = 1.200e-124 Identity = 280/723 (38.73%), Postives = 374/723 (51.73%), Query Frame = 1
Query: 2752 WVRTNVIDQFAPLSSGESFDQQVLWSLTCHPEFPVTGLHRKAVKHKVIELYDATTRVVKERLREHVGSNCVSHVSFDLWADKGSTLKYRGIRLTEVTPDWELESRLLAVRPFNPKPEILNNNHLSGVLETYLKSVLEEFNLDISNVSSSTTDG--EVK-RLGKELLPGQWEWCICHMLNCAVVEATGMHINPYKCKNQTARNLIATIKKTVEYIR--KSPKTEGNFLAEQSELYSGFTRTKLKNAVPHRWSYLADVLGFVILNSEAIGATFAREGNKCPLAEWDNEIRELYSLVKPVAEIIANAQGTHVPTAPDIVLQLCALKMTTLNTTAPLKIRRPERSLAM--GASAAAEPSTPVMRAHTDLTEAARETRALFCRAIDWRWWDKRYGSL-SGRDTDHQFDMQMMMHPATASLAHVDILCDDKERAAGIKEAITERVIKLAVELAEKEKEMEDLASNGKRCAPSGTGGDNETGRRGGMGADGSGGGGSSWSRDRRRYSDPSVVRGSRSGNDGRAGGSARGRGGRRVGPGVSEEEGNAGSGGAVSVRLSLGGKRDKAMLSAYTDLGLVRVAETRNTVPIVKTHEETVREELSDFLRIENCSL-DRVPLRHTLVFWKAHAGCFPYMARVARVVLGAPASAAVIERDFSAAGRMMTSCKRSTDTAWVELILFLHGNKELIPDNVPALTEEQALGAIPGRLRNPASDLQHLDGLFHTILDCGNGE 4893
WV+ +VI+ F PLS GE + + FP+ LH++AV V+E Y ATT + + VG H+ DLW DK STL + G+RL + +W L+SRLLAVR FNP E+ N LS VLE YL VLEEF LD+S + S+T+D +VK RL L+P W+ C+CHMLNC++VEA G ++ K N AR ++ +KK VE+IR KSP + F EQ YS KL N P RWS ++ VL I+N I +AREG+ PLA +NEI ELYSL+KPVAE+I Q THVPT VL L LK++T N A L + P R+ G +T V R H LT+ R+ R A+D R++D+ Y S S + TD FDMQM +HP TA L +VD L + AA +K++IT+++I LAVELAEKE E K+ P D SV + +R PG + AV+ + K+D A + + LGL + T E R EL +E +L D + L +WK +P +AR ARVV GAPASAAV+ERDF+ A MM S + + D +VE++LFLHGN +LIP+ +P L +E IPGRL NP +L LDG ++D N E
Sbjct: 3 WVKWHVIEGFCPLSYGEKRWVRESLNQIAAKGFPLGRLHKEAVAKMVVEYYAATTAQFQAEITAEVGGVPRLHLDLDLWVDKSSTLMFMGVRLFYIDREWRLKSRLLAVRQFNPTLEMFENERLSAVLEKYLTDVLEEFGLDVSMLFSATSDAGSDVKHRLCHTLIPRLWKSCVCHMLNCSLVEAIGTRVDSRKPGNPAARKVVLAVKKVVEHIRRSKSPGAKAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVGIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVRAQGWPEGTGGGERKATSVPRLHNHLTQVGRDAREHLASALDRRYFDRCYKSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEKEMER-------KQAGPE---------------------------------QDESVAKRARP----------------AAAPGSLQT--------AVAKARN---KKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQAKIPGRLSNPIPELHGLDGTLG-LVDLTNDE 657
BLAST of mRNA_H-paniculata_contig53.12690.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 348 bits (892), Expect = 2.870e-102 Identity = 230/618 (37.22%), Postives = 306/618 (49.51%), Query Frame = 1
Query: 3019 GIRLTEVTPDWELESRLLAVRPFNPKPEILNNNHLSGVLETYLKSVLEEFNLDISNVSSSTTDG--EVKRLGKELLPGQWEWCICHMLNCAVVEATGMHINPYKCKNQTARNLIATIKKTVEYIRKSPKTEGNFLAEQSELYSGFTRTKLKNAVPHRWSYLADVLGFVILNSEAIGATFAREGNKCPLAEWDNEIRELYSLVKPVAEIIANAQGTHVPTAPDIVLQLCALKMTTLNTTAPLKIRRPERSLAMGASAAAEPSTPVMRAHTDLTEAARETRALFCRAIDWRWWDKRYGSLSGRDTDHQFDMQMMMHPATASLAHVDILCDDKERAAGIKEAITERVIKLAVELAEKEKEMEDLASNGKRCAPSGTGGDNETGRRGGMGADGSGGGGSSWSRDRRRYSDPSVVRGSRSGNDGRAGGSARGRGGRRVGPGVSEEEGNAGSGGAVSVRLSLGGKRDKAMLSAYTDLGLVRVAETRNTVPIVKTHEETVREELSDFLRIENCSLDR-VPLRHTLVFWKAHAGCFPYMARVARVVLGAPASAAVIERDFSAAGRMMTSCKRSTDTAWVELILFLHGNKELIPDNVPALTEEQALGAIPGRLRNPASDLQHLDGLF 4863
GIRL V W L SRL+AVR FNP E+L +N LS +L+ YL+ VL E+ LD+S + S+T+D +VKRL LLPG WEWC+CHM+NCAVV+A GMH++P K +N AR +I T+K VE+IRKSP+ + F EQ Y+ KL NA P RWS + +VL VI+N AI +A EG PL +EI EL+ ++KP A++I + + P+T R H+ LT AR TR C ++DWRW+DKRY S +DTD+ FDMQM +HP TA L +VD L A +K IT++VI LAV+LAE A TG + T +WS +D + +R + PG EE + E+T R EL+ ++ SL + L +WK A +P +ARVARVV+GA ASAAV+E DFS AGRMMTS + + D+ +VE+ILFLHGN +LIP+++ LTE A IPGRL NP L+ LDG F
Sbjct: 3 GIRLYYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSTLLQKYLERVLAEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMMNCAVVKAFGMHVDPAKSRNPGARKVITTVKTIVEHIRKSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRPAIDGVYAAEGKHSPLTSLTDEIDELHYIIKPAAQVIVSGE---------------------------------------------RPATSTPREHSLLTGVARGTRQHMCESVDWRWFDKRYKSAKSQDTDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAE--------------AAALHTGDGSTT---------------PAWS----AAADKPAAKRAR----------------QAAAPGSKEEP---------------------------------------------PSFEQTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAF 481
BLAST of mRNA_H-paniculata_contig53.12690.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE) HSP 1 Score: 298 bits (763), Expect = 1.660e-85 Identity = 175/428 (40.89%), Postives = 242/428 (56.54%), Query Frame = 1
Query: 2374 EVIAGYLKRYLPVDGYDILAVPARAKSRMYDFGRKVQTMVDGEKKVGFACLATDFCRERSAGGAFISIGVGSSTNATDHLRRKHGCGKSEKSTL--------------AEGTVVSR-ERRVFQARQSELYKTNKMRFLGLYWVRTNVIDQFAPLSSGESFDQQVLWSLTCHPEFPVTGLHRKAVKHKVIELYDATTRVVKERLREHVGSNCVSHVSFDLWADKGSTLKYRGIRLTEVTPDWELESRLLAVRPFNPKPEILNNNHLSGVLETYLKSVLEEFNLDISNVSSSTTDG--EVKRLGKELLPGQWEWCICHMLNCAVVEATGMHINPYKCKNQTARNLIATIKKTVEYIRKSPKTEGNFLAEQSELYSGFTRTKLKNAVPHRWSYLADVLGFVILNSEAIGATFAREGNKCPLAEWDNEIREL 3606
E + ++ ++P D ++I+ R+ S +Y +G KV+ G K FAC + CR A G FI+IG S +NA DH++ S+L EG +R + RV +A S +Y RFL + WV+ N+I+ F P+S GE + LT FP+TG+H +AVK V+E+Y AT K + +G + H+S DLW DK S+LKY GI L V W L SRL+AVR FNP E+L +N LS +++ +L+SVLEE+ LD+S V S+T+D +VKRL LLPG WEWC+CHM+NCA+VEA G H++ K +N AR +I KK VE+I KSP+ + F EQ Y+ KL NA P RWS + +VL VI+N A+ A + EG PL NEI EL
Sbjct: 28 EQVTTAIEDFVPPDSHEIVPKSDRSISNIYKYGVKVKHNPSG--KWFFACFGSACCRANLAAGIFIAIGEKSVSNANDHIKEARRRRVMLPSSLDFCCHWFDFQEDCSREGEDKNRLDLRVSKAVSSAMYTRAHPRFLAMKWVKCNMIEGFCPVSHGEKEWVRASLKLTALKNFPITGIHNEAVKQMVVEMYAATASQFKMEMAAQIGGMRLLHLSLDLWVDKFSSLKYVGIPLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALVQKHLESVLEEYGLDVSLVFSATSDSGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDSAKSRNPGARKVITMGKKVVEHIPKSPRAKAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 453
BLAST of mRNA_H-paniculata_contig53.12690.1 vs. uniprot
Match: A0A6H5KEC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC8_9PHAE) HSP 1 Score: 241 bits (615), Expect = 9.800e-68 Identity = 132/302 (43.71%), Postives = 177/302 (58.61%), Query Frame = 1
Query: 2713 LYKTNKMRFLGLYWVRTNVIDQFAPLSSGESFDQQVLWSLTCHPEFPVTGLHRKAVKHKVIELYDATTRVVKERLREHVGSNCVSHVSFDLWADKGSTLKYRGIRLTEVTPDWELESRLLAVRPFNPKPEILNNNHLSGVLETYLKSVLEEFNLDISNVSSSTTDG--EVKRLGKELLPGQWEWCICHMLNCAVVEATGMHINPYKCKNQTARNLIATIKKTVEYIRKSPKTEGNFLAEQSEL--YSGFTRTKLKNAVPHRWSYLADVLGFVILNSEAIGATFAREGNKCPLAEWDNEIREL 3606
+Y + R L + WV+ N+I F PLS GE + LT FP+TG+H KAVK V+E+Y AT K + +G + H++ DLW DK S+LKY GIRL V W L SRL+AVR FNP E+L +N LS +L+ YL+SVLEE+ LD+S + S+T+D +VKRL LLPG WEWC+CHM+NCA+VEA G H+NP K N +K + ++E + EQ ++ Y+ KL NA P RWS + +VL VI+N A+ A + EG PL NEI EL
Sbjct: 1 MYTQDHPRCLAMNWVKCNIIQGFCPLSHGEKEWVRASLQLTALKNFPITGIHNKAVKQMVVEMYAATASQFKMEMAAQIGGMRLLHLNLDLWVDKFSSLKYIGIRLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVNPAKSINPRCTQSDHDGEKGCGVHPQISQSEVGAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 302
BLAST of mRNA_H-paniculata_contig53.12690.1 vs. uniprot
Match: A0A6H5JM59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM59_9PHAE) HSP 1 Score: 198 bits (503), Expect = 8.610e-53 Identity = 128/338 (37.87%), Postives = 180/338 (53.25%), Query Frame = 1
Query: 2752 WVRTNVIDQFAPLSSGESFDQQVLWSLTCHPEFPVTGLHRKAVKHKVIELYDATTRVVKERLREHVGSNCVSHVSFDLWADKGSTLKYRGIRLTEVTPDWELESRLLAVRPFNPKPEILNNNHLSGVLETYLKSVLEEFNLDISNVSSSTTDGEVKRLGKELLPGQWEWCICHMLNCAVVEATGMHINPYKCKNQTARNLIATIKKTVEYIRKSPKTEGNFLAEQSELYSGFTRTKLKNAVPHRWSYLADVLGFVILNSEAIGATFAREGNKCPLAEWDNEIRELYSLVKPVAEIIANAQGTHVPTAPDIVLQLCALKMTTLNTTAPLKIRRPERSLA 3765
WV+ N+I+ F PLS G + V SL +T L+ KAVK V+++Y AT K + +G + H++ DLW DK S+LK GIRL + W L SRL+AVR FNP E+L +N L +L+ YL+SVLEE+ LD+S + S+T+D A +A G H++P K ++ R +IAT+K +E+IRKSP+ + +F + G T +VL VI+N AI + EG PL +EI EL+S++KP A++I Q T VPT VL L ALK+TTLN +PL+I P R LA
Sbjct: 3 WVKCNIIEGFCPLSHGGK--EWVRASLK------LTALNNKAVKQVVVDMYAATASQYKMEMAAQIGGMRLLHLNRDLWVDKFSSLKCIGIRLFYIDRTWVLRSRLIAVRQFNPTKELLEDNRLLALLQKYLESVLEEYGLDVSLLFSATSD-------------------------AGSDAFGTHVDPAKSRSPVVRKVIATVKMVMEHIRKSPRAKVSFAVV---IGCGVT----------------NVLEAVIVNRAAIDGVYTTEGKDSPLTSLTDEIDELFSIIKPAAQVIVKCQQTSVPTVQLAVLALAALKLTTLNVDSPLEILTPARKLA 288
BLAST of mRNA_H-paniculata_contig53.12690.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.040e-39 Identity = 213/829 (25.69%), Postives = 352/829 (42.46%), Query Frame = 1
Query: 2428 LAVPARAKSRMYDFGRKVQ---TMVDGEKKVGFACLATDFCRERS-AGGAFISIGVGSSTNATDHLRRKHGCGKSEKSTLAEGTVVSRERRVFQARQSELYKTNKMRFLGLYWVRTNVIDQFAPLSSGESFDQQVLWSLTCHPEFPVTGLHRKAVKHKVIELYDATTRVVKERLREHV--GSNCVSHVSFDLWADKGSTLKYRGIRLTEVTPDWELESRLLAVRPFNPKPEILNNNHLSGVLETYLKSVLEEFNLDISNVSSSTTDGEVKRLGKELLPGQWEWCICHMLNCAVVEATGMHINPYKCKNQTARNLIATIKKTVEYIRK-----SPKTEGNFLAEQSELYSGFTRTKLKNAVPHRWSYLADVLGFVILNSEAIGATFAREGNKCPLAEWDNEIRELYSLVKPVAEIIANAQGTHVPTAPD--IVLQLCALKMTTLNTTAPLKIRRPERSLAMGASAAAEPSTPVMRAHT-DLTEAARETRALFCRAIDWRWWDKRYGSLSGRDTDHQFDMQMMMHPATASL--AHVDILCDDKERAAGIKEAITERVIKLAVELAEKEKEMEDLASNGKRCAP---SGTGGDNETGRRGGMGADGSGGGGSSWSRDRRRYSDPSVVRGSRSGNDGRAGGSARGRGGRRVGPGVSEEEGNAGSGGAVSVRLSLGGKRDKAMLSAYTDLGLVRVAETRNTVPIVKTHEETVREELSDFL-RIENCSLDRVPLRHTLVFWKAHA-GCFPYMARVARVVLGAPASAAVIERDFSAAGRMMTSCKRSTDTAWVELILFLHGNKELIPDNVPALTEEQALGAIPGRLRNPASDLQHL 4851
L P+ +S ++D G + D +KK + C+ +D CRE S AG +I+ + NAT HLR HG S+K+ A+ T +R V + +++ + ++ R + L +V+ +I S +S D + + + C FP + L+ + +KH V+ELYDAT +R+ + V H +FDLW K S KY G+RL T + L+S L+AV+ F P ++ ++ LS +L +++ VL+EF LD +++ + TD L W C V N + +NL A ++ ++ ++K + T + ++ KL NAVPHRW +VL ++ + +A+ + + N QG P A ++ +L +L + + + E+ L G S A + ++RA T D+T+ T DW +L+ + D + T ++ A +D K A + +AV ++ EM S P S D E GR + VV +G + G G S S G ++V S +R K +L + G + + +R+ P T +E ++E F+ R + ++ P+ L FW +P MAR ARV+L PAS+AV+ERDFS AGR++T + A+VE++LFL+GN+E IP VP L++ Q A+P RL NP + + L
Sbjct: 63 LPPPSGTRSIVFDHGVSFEQDCARPDPKKKRWY-CMGSDRCRELSMAGKTWINCQEKGTGNATRHLRDAHGI-VSKKTDTAKKTRGTRTANVSKHKEAVMKSSDPGRVMLLMYVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVELYDATVSKFSYSIRKAITGAGGAVLHANFDLWTSKWSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSSKQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRA---ACKNLGA--RQVIDTVKKVVEHLNKSTLMKARYDDIQVLLYGKSMKLVNAVPHRWISTCNVLEEILRSWQALEEHYQK-----------------------------NEQGGSFPLAQHKTVIEELYSL----MKPISVIMKESQEKGLPTGLSTFA--ALVMLRADTLDVTKPLEVTVPRKVTTTDWA------RTLATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDANV----------VAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRV-------------------HKLIKGKVVDLMVKLAEGAGAYPGKATEGDTSGASASAPPPFKRSRGPLTVGTS---ERTKRLLKSGV-FGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGQALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLSKSQGQEAVPRRLSNPNEETERL 810
BLAST of mRNA_H-paniculata_contig53.12690.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE) HSP 1 Score: 150 bits (379), Expect = 8.370e-35 Identity = 103/267 (38.58%), Postives = 135/267 (50.56%), Query Frame = 1
Query: 3295 ATGMHINPYKCKNQTARNLIATIKKTVEYIRKS--PKTEGNFLAEQSELYSGFTRTKLKNAVPHRWSYLADVLGFVILNSEAIGATFAREGNKCPLAEWDNEIRELYSLVKPVAEIIANAQGTHVPTAPDIVLQLCALKMTTLNTTAPLKIRRPERSLAM--GASAAAEPSTPVMRAHTDLTEAARETRALFCRAIDWRWWDKRYGSLSGRDTDHQFDMQMMMHPATASLAHVDILCDDKERAAGIKEAITERVIKLAVELAEKEKE 4083
A G ++ K N+ AR ++ +KK VE+IRKS P + F EQ YS KL N P RWS + VL I+N I +AREG+ PLA +++I ELYS++KPVAE+I Q THVPT L L ALK++T N A L + P R+ GA +T V R + A + TD FDMQM +HP TA L +VD L K AA + + IT+++I LAVELA KE E
Sbjct: 13 AIGTRVDSRKPGNRAARKMVLAVKKVVEHIRKSKSPGAQAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVGGVLEATIVNRVDIDGVYAREGSVNPLAPHEHDIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPARAQGRPEGAGGVEPKATSVPRCYKPADSA--------------------------KTTDFVFDMQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELATKEME 253
BLAST of mRNA_H-paniculata_contig53.12690.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 144 bits (363), Expect = 9.890e-32 Identity = 168/633 (26.54%), Postives = 275/633 (43.44%), Query Frame = 1
Query: 2962 VSHVSFDLWADKGSTLKYRGIRLTEVTPDWELESRLLAVRPFNPKPEILNNNHLSGVLETYLKSVLEEFNLDISNVSSSTTDG--EVKRLGKELLPGQ----WEWCICHMLNCAVVEATGMHINPYKCKNQTARNLIATIKKTVEYIRKSPKTEGNFLAEQSELYSGFTRTKLKNAVPHRWSYLADVLGFVILNSEAIGATFAREGNKCPLAEWDNE--IRELYSLVKPVAEIIANAQGTHVPTAPDIVLQLCALKMTTLNTTAPLKIRRPERSLAMGASAAAEPSTPV---MRAHTDLTEAARETRALFCRAIDWRWWDKRYGSLSGRDTDHQFDMQMMMHPATASLAHVDILCDDKERAAGIKEAITERVIKLAVELAEKEKEMEDLASNGKRCAPSGTGGDNETGRRGGMGADGSGGGGSSWSRDRRRYSDPSVVRGSRSGNDGRAGGSARGRGGRRVGPGVSEEEGNAGSGGAVSVRLSLGGKRDKAMLSAYTDLGLVRVAETRNTVPIVKTHEETVREELSDFLRIENCSLDRVPLRHTLVFW-KAHAGCFPYMARVARVVLGAPASAAVIERDFSAAGRMMTSCKRSTDTAWVELILFLHGNKELIPD--NVPALTEEQALGAIPGR 4818
+ H D+WADK S K+ G+ + VT ++EL+ LL+++ + P + L + VL L+++L EF S+++S TTD +VK + L + W WC CH++ A +A G H +P K KN A N++ + V + KS F Q +L K+ N P RW L + VI + ++ G L E DN+ I +LYSL++ ++ + + Q +P DI ++ LKM LN++A LK+ G E P+ M AH +L A++ R CRA+ R+ YG H +D S + CD A + +E A++L +E + +LA+ AP T ++ + G+ W+ ++R + V+ ++ G GG S+ A + GAV R K ++ G VA +++ V EE V E+ + + +D +P L +W K FP + VA+ G+ ASAA IERDFS G T + + W+E+++ L GN ELIPD ++P++ + +P +
Sbjct: 12 ILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVL--KIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDRKEQKKPLRHKMVAHDELHPVAQKARDKLCRALVSRF----YG--------HVWD---------DSCLDPSMFCD---AACLLTPPFSEGNYLSAMKLTAEEDD--NLAAVSTVVAP--TSDEDVREKLEGI-----------WAEIKKRA--VTAVKTEQNRVAGEGGGQG------------SDPFKRARTSGAVPSRR-------KNYEDDFSMFGCNEVAPSQSDGGDVDFVEEEVSGEIIRYKGVFMKPID-LPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAK 581 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53.12690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig53.12690.1 >prot_H-paniculata_contig53.12690.1 ID=prot_H-paniculata_contig53.12690.1|Name=mRNA_H-paniculata_contig53.12690.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=917bp MEECRTPAQGLKAIPSQAESVGGEVTRTLEVDGQSGSQQPPKRHKRAPALback to top mRNA from alignment at H-paniculata_contig53:895..10763+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig53.12690.1 ID=mRNA_H-paniculata_contig53.12690.1|Name=mRNA_H-paniculata_contig53.12690.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9869bp|location=Sequence derived from alignment at H-paniculata_contig53:895..10763+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig53:895..10763+ >mRNA_H-paniculata_contig53.12690.1 ID=mRNA_H-paniculata_contig53.12690.1|Name=mRNA_H-paniculata_contig53.12690.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5502bp|location=Sequence derived from alignment at H-paniculata_contig53:895..10763+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |