mRNA_H-paniculata_contig5258.12633.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5258.12633.1 vs. uniprot
Match: A0A6H5LB76_9PHAE (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LB76_9PHAE) HSP 1 Score: 1035 bits (2677), Expect = 0.000e+0 Identity = 512/767 (66.75%), Postives = 601/767 (78.36%), Query Frame = 1
Query: 1 WLQEMSSDICDKVRDTTLGLPLDVDYAALKKKALAGSVDWVPPAFTYRSDTVDEEYPDMCANTQASVSAVHFYEANHLPERYKNTLFVGDYSKNCVFYFDTNEKTGHVDWTTPHVLFESRAIVDFNTDPKTGILYAIDAKFSILIRISAVGGEISSQAPDAVLEADVTMGALPLEVTLDASESSDPNGIVSLQWDCDGDGVYEELSAWSVVAARQHSCNYALDGVYEATVEVTNAANVSSTDSVSITAGVAVPVTPGPTPAPSXXXXXXXXXXXXXLAPPLGEALASPPELEWEFDAETGVLSGALEFGVVTMKNFWGETKTRGFNGMIPGPTIRIEACETYHLKVTNVLEMPNPSGMWNTMKDPNTTNIHTHGLHLSGEQPADDVMFTKILPGETYTYEYTIPCDHTGGTFWYHPHHHGSTSVQMGGGAMGVLIVEDRPDVHGVPSQIVDMPERVLAIQELSPEETTADSEASGDTLYTSTATGRHYLVNGEVLPFIELTRGHWVRFRMAFAGHGNSHAITIMDPNGHCEMNVLAKDGVYLSEVPREEAKLFFTAASRVDVAVRCSATGSYDLRIESTRTVGKTSALAMLSVLPTTKEEDAALDSWKPCRPYYLQDLTEYDFIQEDTVGLLVRETIGGEPFMGPDDVLLNMTVGEVQQWNLEGSEQHPFHMHVNHMQFVEVDGPLLVPGWNHVGDWIDTVSTGLAVVRFRTERFGGHVMMHCHVNTHSDTGVMALAMIQGGQEANEDPIALAAGTCGSEGVQGFGY 2301
WL + SD CD VRDTTLGLPL++DY ALK KALAG VDWVPPA+ Y T+DEEYP+ CANTQ+SVSA+H YE HLPERY N LFVGDYSK+C FYFD +E TG VDW TPHVLFE+RAIVDF TDPKTGI+YAIDAKFSILI+I A+ G ++S P VLEAD G LPL+VT+DAS SSD GIV L+WDC+GDGV+E S W+V +AR H+C Y +DG YE +V TN + ++ S+ + AG P PT XXXXXXXXXXXXX APP+G+AL SP ELEWE + TGV G +E G VT+ NFWG T TR FNG IPGPTIR+EAC+TY L TN L NP G WNTMKDPNTTN+HTHGLH+SGE PADDV++ +I PGE++T+ YTIPCDH GGTFWYHPHHHGSTS+QMGGGAMG L+VEDR DVHG+P QI +MPE V+ IQE++PE +TADS+ASGD LY++TA HYLVNG+V+P I++T G WVR RMAFAGHG++HAI+I P CEM VLAKDGVYL EVPR E KLFFT +SRVD AVRCS G ++ RIESTR++ T+ LA L V + D LD+W PCRPYYLQDL + +T+GLLVRETIG E + GP++ ++NMTV E+Q+W LEGSEQHPFHMHVNHMQF VDGP LVPGWNHVGDW+DTVST +AVVRFRTER+GGHV MHCHVN+HSDTGVMA+A I GG+ NEDPIALAAGTCG EGV G+GY
Sbjct: 353 WLADNESDACDDVRDTTLGLPLEIDYDALKTKALAGQVDWVPPAYVYLDGTIDEEYPEFCANTQSSVSALHVYEGGHLPERYHNRLFVGDYSKDCAFYFDIDETTGVVDWATPHVLFENRAIVDFATDPKTGIMYAIDAKFSILIKIMAIDGPLTSGGPTIVLEADALEGPLPLDVTIDASGSSDAEGIVLLEWDCEGDGVFEAESDWTVASARNHTCTYTVDGTYEPSVRATNGLDETAVKSLEVLAGEVA--APAPTXXXXXXXXXXXXXXXXXXAPPVGDALESPVELEWELNDATGVFMGEIEMGAVTIDNFWGVTTTRAFNGQIPGPTIRMEACQTYELTYTNNLGPLNPGGAWNTMKDPNTTNLHTHGLHISGESPADDVLYVEITPGESHTFVYTIPCDHAGGTFWYHPHHHGSTSLQMGGGAMGALVVEDRVDVHGIPDQIANMPELVMVIQEMNPELSTADSDASGDELYSTTAAQTHYLVNGQVMPTIQMTTGEWVRLRMAFAGHGDNHAISIEAPEDSCEMAVLAKDGVYLGEVPRMEPKLFFTPSSRVDTAVRCSVAGDFEFRIESTRSINSTTPLAALYVEGGSSSPDDDLDTWTPCRPYYLQDLVNAT-LGGETLGLLVRETIGDEFYSGPENFVVNMTVDEIQEWMLEGSEQHPFHMHVNHMQFAIVDGPSLVPGWNHVGDWVDTVSTTVAVVRFRTERYGGHVAMHCHVNSHSDTGVMAVADIDGGEGPNEDPIALAAGTCGIEGVAGYGY 1116
BLAST of mRNA_H-paniculata_contig5258.12633.1 vs. uniprot
Match: A0A835ZH56_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH56_9STRA) HSP 1 Score: 330 bits (845), Expect = 1.730e-94 Identity = 195/499 (39.08%), Postives = 274/499 (54.91%), Query Frame = 1
Query: 865 PELEWEFDAETGVLSGALEFGVVTMKNFWGETKTRGFNGMIPGPTIRIEACETYHLKVTNVLE-MPN---PSGMWNTMKDPNTTNIHTHGLHLSGEQPADDVMFTKILPGETYTYEYTIPCDHTGGTFWYHPHHHGSTSVQMGGGAMGVLIVEDRP-DVHGVPSQIVDMPERVLAIQELSPEETTADSEASGDTLYTSTATGRHYLVNGEVLPFIELT--RGHWVRFRMAFAGHGNSHAITIM----------DPNGHCEMNVLAKDGVYLSEVPRE--EAKLFFTAASRVDVAVRCSATGSYD----LRIESTRTVGKTSALAMLSVLPTTKEEDAALDSWKPCRPYYLQ-DLTEYDFIQEDTVGLLVRETIGGEPFMGPDDVLLNMTVGEVQQWNLEGSEQHPFHMHVNHMQFVEVDGPLL----VPGWNHVGDWIDTVST-GLAVVRFRTERFGGHVMMHCHVNTHSDTGVMALAMIQG-GQEANEDPIALAAGTC 2271
PE +W A+ G +G LEFG V + G +T G+NG+ PGP +R++AC YHL + N LE P P N DP TNIH HG+H+SG P DDV F I GE Y YT+PCDHTGGT WYHPHHHG ++Q G GAMG+LIVE P + +P +I MPE+ + IQE+ P ++A+ D L+ + LVNG +E+T G WVR + + + A+TI C++ +L KDGV++++ PR + +F + +SR+D+A+RC G + I L ++V+P+ ++ L +W PCRP YL D++ + T+ L VRE +GG+ F D+ + + +G QQW ++GS+ HPFH+HVNHMQ GP VPGW GD+IDT+S G V R ERF G ++MHCH+ HSD GV+ +A I G G + P + GTC
Sbjct: 266 PEFQWARQAD-GSYAGVLEFGAVEIATATGTMRTVGYNGLQPGPIMRMQACGVYHLTLKNTLEGWPEGIGPEAGVNGEHDPTVTNIHLHGMHISGMAPGDDV-FAAIAAGEEQEYVYTVPCDHTGGTNWYHPHHHGIVALQSGTGAMGMLIVESNPREAQDMPPEIQMMPEQFIVIQEIDPIALQTYADAAKDQLFQTDIAQAFTLVNGCDAGDVEMTVEAGQWVRVHILNHANAFNSALTIKAAVAGAAPAAPAAAQCDVLLLGKDGVWVADAPRAVPDNNMFVSISSRLDIALRCPTAGKAHTLAMMHINDPAAPEAPVPLVTITVVPSLRDAADDLPAWGPCRPAYLPADISALPEVVPKTLALEVREGVGGQVFSSVDNYVTEIGLGFAQQWTIQGSDLHPFHIHVNHMQLGPTIGPANNWPDVPGWFQPGDYIDTISALGNLPVFMRPERFVGPMVMHCHIAQHSDNGVIGIANILGNGADGEAPPTVVDFGTC 762
BLAST of mRNA_H-paniculata_contig5258.12633.1 vs. uniprot
Match: A0A835ZCB5_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB5_9STRA) HSP 1 Score: 327 bits (837), Expect = 1.170e-92 Identity = 199/505 (39.41%), Postives = 274/505 (54.26%), Query Frame = 1
Query: 865 PELEWEFDAETGVLSGALEFGVVTMKNFWGET-KTRGFNGMIPGPTIRIEACETYHLKVTNVL----EMPNPSGMWNTMKDPNTTNIHTHGLHLSGEQPADDVMFTKILPGETYTYEYTIPCDHTGGTFWYHPHHHGSTSVQMGGGAMGVLIVEDRPDVHGV-PSQIVDMPERVLAIQELSPEETTADSEASGDTLYTSTATGRHYLVNG---------------EVLPFIELTRGHWVRFRMAFAGHGNSHAITIMDP--NG-HCEMNVLAKDGVYLSEVPREEA--KLFFTAASRVDVAVRCSATGS-YDLRIESTRTVGKTSA----LAMLSVLPTTKEEDAALDSWKPCRPYYLQDLTEYDF-IQEDTVGLLVRETIGGEPFMGPDDVLLNMTVGEVQQWNLEGSEQHPFHMHVNHMQFVEVDGPLLVPG---WNHVGDWIDTVST-GLAVVRFRTERFGGHVMMHCHVNTHSDTGVMALAMIQGGQEANEDPIALAAGTC 2271
PEL W A+ G + L GVVT+ G T +TR +NG+IPGP IR++AC+ Y+L V N L E +G+ N P TNIHTHGLH+SGE PAD+ F ILPG+ YTY+Y IPCDH GG WYHPH HG+ ++Q GGA G++++E V P+ I MPE+ L IQE+ P A + SGD ++ S T LVNG L I + G W R R+ GH + ITI NG C++ +LAKDGV L++ PR A LF + ++R+DVA++C G +++ VG A +A ++V P + L W PCRP YL D + ++ L VR+ + G+ F PD + M+ ++ W + GS++HP H+HV+HMQ V PG WN GDW+D++S G V R ER+GGH +MHCH+ HSD G+MA+ ++ G A P GTC
Sbjct: 388 PELGWTHQAD-GTFTADLTLGVVTLTTADGGTLRTRAWNGLIPGPIIRMKACQVYYLTVRNDLGAWPEGKPETGVMNGFHGPTVTNIHTHGLHISGESPADNP-FVSILPGQEYTYQYRIPCDHIGGLHWYHPHKHGAVALQTHGGAAGLIVIEPMAREASVTPAAIQTMPEQYLMIQEIDPPGLQAFATQSGDRIFDSDITAAFTLVNGCSAPGAGVVVKPAMTTALANINVEAGQWTRLRLLNVGHQYNSIITIEPKVLNGVPCQLGLLAKDGVPLADAPRAVAGNALFVSLSTRLDVAIKCFVAGVVHNVAYAHVGDVGAEVAAAPTIATITVTPFLRPPADPLPLWAPCRPGYLTDARKVPRRLRGPPFDLTVRDALNGQKFTSPDTYIRTMSNRNLEAWQITGSDKHPLHIHVDHMQLGAVGVTNQWPGAPNWNMPGDWVDSISAPGAVPVYMRPERYGGHRVMHCHIAEHSDMGIMAVMYVRYGSTAKPFPYVKNWGTC 890
BLAST of mRNA_H-paniculata_contig5258.12633.1 vs. uniprot
Match: A0A835Z3E9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E9_9STRA) HSP 1 Score: 327 bits (839), Expect = 1.720e-92 Identity = 188/466 (40.34%), Postives = 264/466 (56.65%), Query Frame = 1
Query: 871 LEWEFDAETGVLSGALEFGVVTMKNFWGETKTRGFNGMIPGPTIRIEACETYHLKVTNVLE-MPNP-SGMWNTMKDPNTTNIHTHGLHLSGEQPADDVMFTKILPGETYTYEYTIPCDHTGGTFWYHPHHHGSTSVQMGGGAMGVLIVEDRPDVHGVPSQIV---DMPERVLAIQELSPEETTADSEASGDTLYTSTATGRHYLVNGEVLPFIELTRGHWVRFRMAFAGHGNSHAITIMDPNGH--CEMNVLAKDGVYLSEVPREEAKLFFTAASRVDVAVRCSATGSYDLRIESTRTVGKTSAL--AMLSVLPTTKEEDAALDSWKPCRPYYLQDLTEYDFIQEDTVGL-LVRETIGGEPFMGPDDVLLN---MTVGEVQQWNLEGSEQHPFHMHVNHMQFVEVDGPLLVPGWNHVGDWIDT-VSTGLAVVRFRTERFGGHVMMHCHVNTHSDTGVMALAMIQGG 2226
L W +A+ G LS LEFG + N +G T+TRG+NG IPGP +R++AC+ Y L + N L +P S N +P+TTN+HTHGLH+SG AD+V+ ++ GE+ Y Y IPCDH GGT +YH HHHG ++Q GGGA+G+L V+D P + S+ MP R + +Q + P+ + A GD L+ +TAT +HYL NG + +T G W R RM G ++ ++I + G C M +LAKDGVY S LFF+ +SRVD+A+ C G+Y + + TV T+ L A L+V T + A L +WKPCRP+YL DL +++ + L+ I + + G LN G Q ++ G+ QH FHMHVNH Q V W GDW+DT S +V+FR +R+GG ++ HCHV HSDTG+MA + GG
Sbjct: 684 LAWTTNAD-GTLSATLEFGAIQFTNKYGTTRTRGYNGGIPGPLMRLQACKVYKLTLKNTLSGWADPTSPTLNQFTNPSTTNLHTHGLHVSGMGNADNVL-REVARGESAVYTYAIPCDHAGGTHFYHAHHHGGVTLQAGGGAVGLLRVDDNPTFEAIASRPAIYGSMPTRYVVLQYVDPDTLQTTAAAMGDDLFYTTATAKHYLTNGCDDYTMSITLGKWTRLRMLHVGRLDNALVSIQNQGGGDPCIMALLAKDGVYDSAPGTVYTNLFFSISSRVDIALYCKTAGTYSVLLS---TVSFTTKLKVATLTVAAGTAVDAATLPAWKPCRPFYLSDLRPVTVAAANSLAITLINGAINDQSWKGAATPYLNKDPFAEGVAAQASIAGTSQHQFHMHVNHFQLQAAYEAGGVANWYKAGDWLDTFASADTGIVKFRVDRYGGDMICHCHVFEHSDTGMMARIALSGG 1144
BLAST of mRNA_H-paniculata_contig5258.12633.1 vs. uniprot
Match: A0A835Z524_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z524_9STRA) HSP 1 Score: 325 bits (832), Expect = 5.010e-92 Identity = 199/496 (40.12%), Postives = 265/496 (53.43%), Query Frame = 1
Query: 871 LEWEFDAETGVLSGALEFGVVTMKNFWGETKTRG---------------------------FNGMIPGPTIRIEACETYHLKVTNVLE-MPNPSGMWNTMKDPNTTNIHTHGLHLSGEQPADDVMFTKILPGETYTYEYTIPCDHTGGTFWYHPHHHGSTSVQMGGGAMGVLIVEDRPDVH---GVPSQIVDMPERVLAIQELSPEETTADSEASGDTLYTSTATGRHYLVNGEVLPFIELTRGHWVRFRMAFAGHGNSH--AITIMDPN-GHCEMNVLAKDGVYLSEVPR--EEAKLFFTAASRVDVAVRCSATGSYDLRIESTRTVGKTSALAMLSVLPTTKEEDAALDSWKPCRPYYLQDLTEYDFIQEDTVGLLVRETIGGEPFMGPDDV-LLNMTVGEVQQWNLEGSEQHPFHMHVNHMQF-VEVDGPLLVPGWNHVGDWIDTVSTG-LAVVRFRTERFGGHVMMHCHVNTHSDTGVMALAMIQGGQEANE 2241
L W A+ GVL L+F + N G T+TRG +NG IPGP IR++AC+TY + + N L N G NTM P TTN+HTHGLH+SG AD+V ++LPG Y IPCDH GGT +YHPHHHGS ++Q GGA G+L ++D P P+ MP + L Q + P + A D L+ STAT RHYL NG +T G W R RM G ++ +IT D G C++ ++AKDGVY +E R + ++FF+ +SRVD AV C G YD+ + +T + +A LSV T A L W+PCRP+YLQDL L I G+ + GPDD L + G+ + L G+ HPFHMHVNH Q + + P L PGW GDW+DT++ G AVVRFR +R+GG+++ HCH+ HSDTG+M I GG +E
Sbjct: 572 LAWTQGAD-GVLRARLDFEPIQFTNKQGTTRTRGRRRTXXXXXXXXXXXXXXXXXXXXXXXYNGHIPGPIIRMQACKTYQITLRNGLAGWANVPGAENTMHSPQTTNLHTHGLHISGMGTADNVA-REMLPGSDTVITYAIPCDHAGGTHFYHPHHHGSVTLQAFGGAAGILQIDDNPAFEIGDHRPAIYGQMPNKYLIFQYVHPAFLNERASAMKDDLFASTATERHYLTNGCADYTTGVTLGKWTRLRMLHIGRKDNAIASITARDGGKGACKVALIAKDGVYDNEAGRILADGRVFFSISSRVDAAVYCDTAGLYDV-VLTTGGMDAPVTVATLSVTGATPVHPAELPIWRPCRPHYLQDLRPLPVPATKLDITLANGAIDGKLYGGPDDAPLTTLAEGDAAEVTLSGTSAHPFHMHVNHFQLQADQELPGLAPGWYRAGDWLDTLAVGGTAVVRFRADRYGGNMIAHCHIFEHSDTGMMTKIAITGGAAVDE 1064
BLAST of mRNA_H-paniculata_contig5258.12633.1 vs. uniprot
Match: A0A835YZ52_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ52_9STRA) HSP 1 Score: 321 bits (823), Expect = 2.670e-90 Identity = 247/787 (31.39%), Postives = 343/787 (43.58%), Query Frame = 1
Query: 127 PAFTYRSDTVDEEYPDMCANTQASVSAVHFYEANHLPERYKNTLFVGDYSKNCVFY--FDTNEKTGHVDWTTPHVLFESR--AIVDFNTDPKTGILYAIDAKFSILIRISAVGGEISSQAPDAVLEADVTMGALPLEVTLDASESSDPNGIVSLQWDCDGDGVYEELSAWSVVAARQHSCNYALDGVYEATVEVTNAANVSSTDSVSITAGVAVPVTPGPTPAPSXXXXXXXXXXXXXLAPPLGEALASPPELEWEFDAETGVLSGALEFGVVTMKNFWGETKTRGFNGMIPGPTIRIEACETYHLKVTNVLEM-PNPSGMWNTMKDPNTTNIHTHGLHLSGEQPADDVMFTKILPGETYTYEYTIPCDHTGGTFWYHPHHHGSTSVQMGGGAMGVLIVEDRPDVHGV---PSQIVDMPERVLAIQELSPEETTADSEASGDT----------------LYTSTATGRHYLVNGEVLPFIELTRGHWVRFRMAFAGHGNSHAITIMDPNGH--CEMNVLAKDGVYLSEVPRE-EAKLFFTAASRVDVAVRCSATGSYDLRIESTRTVGKTSALAMLSVLPTTKEEDAALDSWKPCR-----------------------------------------------------PYYLQDLTEYDFIQEDTVGLLVRETIGGEPFMGP-DDVLLNMTVGEVQQWNLEGSEQHPFHMHVNHMQF-VEVDGPLLVPGWNHVGDWIDTVSTGLAV-VRFRTERFGGHVMMHCHVNTHSDTGVMALAMIQGGQEAN 2238
PAF +R D VD ++ D C ++A+VS V++ + L R++N +F D+ K C+FY D N K +V L E I T P TG L +D + S +I I+ T G P E+ P+G G +VVA + C AL G E N PEL+W + GV L G V N WG T+TRG+NG +P P +R+ AC Y L + N + NP G N ++P TTN+HTHGLH+SG ADD + ++LPG+ Y Y IPCDH GGT +YHPHHHGS + G GA+G+L V+D P + P+ MP+R LA Q P A ++ GD L+ +TA +HYL NG +T G W R RM GHG ++++ G C++ +LAKDG+Y V R A+ +F+ +SRVDVA+ C+ G+Y L +++ K LA +V P+ A L WKPCR PYYL DL I G+ + G L + G + W++ G+++HPFH+HVN MQ V P GW GDW+DT+S+ V VRFRT+RFGG+++ HCH+ HSD+G+M A+I GGQ+AN
Sbjct: 427 PAFEFR-DVVDPDF-DGCRGSRAAVSGVYYNMGDKLGGRFQNKIFFADHEKQCLFYGSVDDNGKIVNV-----RSLMEKGDVGISQITTHPTTGALLLMDYQRSRIISITTK-----------------TDGPAP--------ETPPPDG---------GGKPSLRPPKGAVVAKFKPQC--ALQG------EERNF-----------------------------------------------------PELKWT-QGKDGVFRATLTLGAVQFANKWGTTRTRGYNGGVPAPLMRLRACGVYKLTLRNAQQKWGNPGGALNDFREPATTNLHTHGLHVSGIGNADDT-YREVLPGKETVYTYAIPCDHAGGTHFYHPHHHGSVFLSAGAGAVGMLRVDDNPTLEANARRPAIYGRMPQRYLAFQFFDPSRLKALADGMGDQARHPAAPLRLNALAKGLFYTTAKRKHYLTNGCTGYTNSITIGKWTRLRMLHIGHGADAVVSLVREGGGKTCKVAMLAKDGIYSDTVGRVVPAQFYFSVSSRVDVAIYCAQPGTYSLALKNAH-FPKPVRLARFTVAPSKAVNSAKLPLWKPCRCAXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPPSCAHRRKLHALCGGAALAPVPYYLSDLRGLPAPPRTVAVSFANGAINGQLWAGARTPPLATVAEGALNAWSVTGTDEHPFHLHVNPMQLQAAVARPGAPAGWFRAGDWLDTLSSPNTVNVRFRTDRFGGNMIFHCHIYEHSDSGMMGHAVITGGQQAN 1108
BLAST of mRNA_H-paniculata_contig5258.12633.1 vs. uniprot
Match: A0A836CIZ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ3_9STRA) HSP 1 Score: 319 bits (818), Expect = 3.660e-90 Identity = 186/458 (40.61%), Postives = 256/458 (55.90%), Query Frame = 1
Query: 916 LEFGVVTMKNFWGETKTRGFNGMIPGPTIRIEACETYHLKVTNVLEMP--NPSGMWNTMKDPNTTNIHTHGLHLSGEQPADDVMFTKILPGETYTYEYTIPCDHTGGTFWYHPHHHGSTSVQMGGGAMGVLIVEDRPDVHG-VPSQIVDMPERVLAIQELSPEETTADSEASGDTLYTSTATGRHYLVNGEVLPFIELTRGHWVRFRMAFAGHGNSHAITIMDPNGH---CEMNVLAKDGVYLSEVPREEA--KLFFTAASRVDVAVRCSATGSYDLRIESTRTVGKTSALAMLSVLPTTKEED-------AALDSWKPCRPYYLQDLTEYDFIQEDTVGLLVRETIGGEPFMGPDDVLLNMTVGEVQQWNLEGSEQHPFHMHVNHMQFVEVDGPLL-------VPGWNHVGDWIDTVSTGLAVVRFRTERFGGHVMMHCHVNTHSDTGVMALAMIQG 2223
L F VV N +G T+TR FN + PTIR++AC Y + +TN L +P+G NT++DP TN+H HGLH+SG D+V+ ++ PG + Y+Y IPCDH G +YH HHHGS SVQ GGGA+G++++ED P G +P + MPER L I+ + PE ++ DT+YTSTAT HYL+N + G W R RM G + + I C + ++AKDGVY+S VPR A ++FF+ ASR DV VRCS G+Y L+I G A + L TK + A L +W+PCRP YLQ L + +L++ + G + VL + +G+ +W LE + HP+HMHVNHMQ V G PGW+ GDW+DT S VRFR ER+ G++++HCHV H+D G+MAL I G
Sbjct: 583 LSFDVVEYTNSYGTTRTRAFN--LYNPTIRMKACGKYLITLTNDLAAGWGDPTGAINTLRDPQRTNLHVHGLHISGNGAVDNVVDVQLSPGGGHLYKYEIPCDHASGLHFYHTHHHGSASVQAGGGAVGLIVIEDNPQFEGTLPGWLNGMPERHLLIEVVEPEAVRGYAKDMSDTVYTSTATKDHYLINKCTSVSVTAPAGRWTRLRMLHVGGALNAKMRIGGGGSSAAACAVGLVAKDGVYVSHVPRALATREVFFSVASRADVVVRCSTPGTYPLQILRLDPSGG-GAWTDIGSLAITKADAVPGPYGIAPLPTWRPCRPAYLQSLLLEPVPTANQYSVLMQTGVNGALY-SEGTVLKQVHLGQTYEWQLENTITHPWHMHVNHMQ-ASVAGESCGMNCCREYPGWHVAGDWVDTYSGPDGKVRFRPERYAGYMIVHCHVYVHADKGMMALVTING 1035
BLAST of mRNA_H-paniculata_contig5258.12633.1 vs. uniprot
Match: A0A835ZAX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX7_9STRA) HSP 1 Score: 308 bits (789), Expect = 5.730e-87 Identity = 188/494 (38.06%), Postives = 268/494 (54.25%), Query Frame = 1
Query: 865 PELEWEFDAETGVLSGALEFGVVTMKNFWGETKTRGFNGMIPGPTIRIEA---CETYHLKVTNVL-EMPNPSG-MWNTMKDPNTTNIHTHGLHLSGEQPADDVMFTKILPGETYTYEYTIPCDHTGGTFWYHPHHHGSTSVQMGGGAMGVLIVEDRP-DVHGVPSQIVDMPERVLAIQELSPEETTADSEASGDTLYTSTATGRHYLVNGEVLPFIELTRGHWVRFRMAFAGHGNSHAITIMDPNGH---CEMNVLAKDGVYLSEVPR-----EEAKLFFTAASRVDVAVRCSATG-----SYDLRIESTRTVGKTSALAMLSVLPTTKEEDAALDSWKPCRPYYLQDLTEY-DFIQEDTVGLLVRETIGGEPFMGPDDVLLNMTVGEVQQWNLEGSEQHPFHMHVNHMQFVEVDGPLL---VPGWNHVGDWIDTVSTGLAV-VRFRTERFGGHVMMHCHVNTHSDTGVMALAMIQG-GQEANEDPIALAAGTC 2271
PE EW + + G G L G V + G + +NGM+PGP +R++A C Y L V N L P P G M NT+ DP TN+H HGLH+SG P DDV I PG+T Y YT+PCDH+ GT WYHPH+HGS+++Q GGA G+L++E ++ +P+ +P + L Q+ +P +T + S SGD ++ + G LVNG + + G W R M +GH + ++ C + +L KDG +L++VPR KLFF+ ASRVD + C G +Y ++ T T + + V+P+ + AL W+PCRP YL DL + D D L VR + G+ F GP+D L MTV + QQW + G++QHP H+HVNHMQ ++ PGW+ GD+IDT+S V VR ERF G + +HCHV +H+D GV+ + I+G G + P G+C
Sbjct: 254 PEFEWHQNGD-GTYEGTLTLGAVELHTSKGFMRMFAYNGMLPGPIMRMKASGTCGKYTLNVINDLARWPAPEGGMINTLHDPTVTNLHLHGLHVSGMAPGDDVSI-MIEPGQTNKYTYTLPCDHSSGTNWYHPHNHGSSALQTTGGAYGLLVIESSARELADMPAAYAALPAQHLVFQDFNPPDTASFSAQSGDGVFATDIDGPLILVNGCEQVELVVEEGQWTRLNMLNSGHIYNSLVSFCPQATDAEDCTVGLLQKDGAWLAQVPRMLEKKRANKLFFSLASRVDAVIMCPTAGVPHTITYSHIVDPTWEGPVT--VGTIRVVPSLRPAAKALPVWEPCRPAYLMDLNDMPDKKLGDAFALEVRTQLNGQLFTGPEDYLATMTVNKPQQWLVIGTDQHPLHIHVNHMQLGDITKANQWDEAPGWHVTGDFIDTLSAKAQVPVRVNPERFIGPMFLHCHVPSHADLGVLGVIDIRGKGDDGEASPEIEDYGSC 743
BLAST of mRNA_H-paniculata_contig5258.12633.1 vs. uniprot
Match: A0A835YVH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH6_9STRA) HSP 1 Score: 314 bits (804), Expect = 8.850e-87 Identity = 198/499 (39.68%), Postives = 268/499 (53.71%), Query Frame = 1
Query: 856 ASPPELEWEFDAETGVLSGALEFGVVTMKNFWGETKTRGFNGMIPGPTIRIEACETYHLKVTN-VLEMPNPSGMW--NTMKDPNTTNIHTHGLHLSGEQPADDVMFTKILPGETYTYEYTIPCDHTGGTFWYHPHHHGSTSVQMGGGAMGVLIVEDRP-DVHGVPSQIVDMPERVLAIQELSPEETTADSEASGDTLYTSTATGRHYLVNGEVLPF-IELTRGHWVRFRMAFAGHGNSHAITIMDPNGHCEMN----VLAKDGVYLSEVPR--EEAKLFFTAASRVDVAVRCSATGS----YDL---RIESTRTVGKTSALAMLSVLPTTKEEDAALDSWKPCRPYYLQDLTEYDFIQEDT---VGLLVRETIGGEPFMGPDDVLLNMTVGEVQQWNLEGSEQHPFHMHVNHMQF---VEVDGPLL-VPGWNHVGDWIDTVST-GLAVVRFRTERFGGHVMMHCHVNTHSDTGVMALAMIQG-GQEANEDPIALAAGTC 2271
A+PPEL W A+ G G L GVV + G +TR +NGMIPGP +R+E C YH+ V N E P+ + + NTM P TN+H HGLH+SGE P DD F I PG T Y +PCDH+ G+ WYHPHHHGS ++Q GGA G+L+V P + G P+ I +PE+ +A+QE+ P + T + A+ DT++ + T LVNG P I L G W R + N E N + KDGV +S+ PR + +F + ASR+DVAVRC A + Y L +I + LA +SV+ + + L +W PCRP YL D Y+ +T V L VR + G F GP D + +T+G VQ W++ G++ HP H+HVNHMQ V D L VP W+ GDW+D +S A+V R F G ++MHCH+ HSD GV+ +A I G GQ + P GTC
Sbjct: 574 ATPPELGWRRRAD-GSYEGDLTLGVVNVATAAGTMRTRAWNGMIPGPLMRMEPCGVYHINVFNDQAEFPDTARDYALNTMGAPTHTNLHVHGLHVSGESPGDD-SFVTIEPGATQQYTIAVPCDHSSGSNWYHPHHHGSVAIQTEGGAAGLLVVGPSPTEASGTPNDIQALPEQFIAVQEIVPAKLTQYAGAAHDTVFATNITDPFLLVNGCAAPAPITLEAGQWTRLHLL---------------NVALEFNSVFALTTKDGVPVSDAPRAVDNNLMFMSIASRLDVAVRCPAAAAAGPAYALTYAQIGNAAAPAAPQVLAAISVVVSARAAAPDLPAWNPCRPAYLMDA--YNAAPGNTDRLVPLDVRNNLNGYVFKGPGDYFMQLTLGRVQPWSVSGADVHPLHIHVNHMQIGAEVTDDNQWLEVPNWSRAGDWVDVLSQRNGAIVYVRPVTFSGPMVMHCHIAEHSDLGVIGVAKINGQGQGPVDSPAVTNHGTC 1053
BLAST of mRNA_H-paniculata_contig5258.12633.1 vs. uniprot
Match: A0A835YUJ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ5_9STRA) HSP 1 Score: 303 bits (777), Expect = 2.410e-86 Identity = 246/779 (31.58%), Postives = 351/779 (45.06%), Query Frame = 1
Query: 118 WVPPAFTYRSDTVDEEYPDMC-ANTQASVSAVHFYEANHLPERYKNTLFVGDYSKNCVFYFDTNEKTGHVDWTTPHVLFESRAIVDFNTDPKTGILYAI--DAKFSILIRISAVGGEISSQAPDAVLEADVTMGALPLEVTLDASESSDPNGIVSLQWDCDGDGVYEELSAWSVVAARQHSCNYALDGVYEATVEVTNAANVSSTDSVSITAGVAVPVTPGPTPAPSXXXXXXXXXXXXXLAPPLGEALASP---PELEWEFDAETGVLSGALEFGVVTMKNFWGETKTRGFNGMIPGPTIRIEACETYHLKVTNVLEMPNPSGM-------WNTMKDPNTTNIHTHGLHLSGEQPADDVMFTKILPGETYTYEYTIPCDHTGGTFWYHPHHHGSTSVQMGGGAMGVLIVEDRP-DVHGVPSQIVDMPERVLAIQELSPEETTADSEASGDTLYTSTATGRHY-LVNG----EVLPFIELTRGHWVRFRMAFAGHGNSHAITIM------DPNGHCEMNVLAKDGVYLSEVPR---------------EEAKLFFTAASRVDVAVRCSATGSYDL---RIEST-------RTVGKTSALAMLSVLPTTKEEDAALDSWKPCRPYYLQDLTEYDFIQEDTVGLLVR------ETIGGEPFMGPDDV--LLNMTVGEVQQWNLEGSEQHPFHMHVNHMQFVEVDGPL--LVPGWNHVGDWIDTVST-GLAVVRFRTERFGGHVMMHCHVNTHSDTGVMALAMIQGGQEANEDPIALAAGTC 2271
W PP F YR+ +D + +C +T A+V++VH Y+ LPE + L D C++YFDT++ + +PH L + I+D P G LY + D + + + R+ A G MG GV TP PT A XXXXXX P+ E +P PELEW A+ G SG LE V M G TRGFNGM+PGP IR++AC TY L++ N + P+G+ N DP TN+H HGLH+SG P D M T + GE Y YTIPC+H GTFWYHPH HGST++Q GGA G+LIVE P + P MPE++L +Q+++ + + SGD+L++ + + + +VNG + + L G W + RM G + ++I+ DP C++ +LAKDGV+LS+ PR LFF+ +SRVDVA+RC A G + + RI + + +A ++V AL KPCRP YL D+ ++ V L +R + G + G D + MT+G+ QW ++GS HPFH HVNHM P + W+ GDW+D++S G A V R + F G ++MHCH+ H+D G+M + I+G +D +A GTC
Sbjct: 146 WKPPIFEYRTGALDPNHSGVCMGDTSAAVTSVHVYDGLDLPEALQGKLIFSDKIIGCMWYFDTDKDGQPTNLNSPHALMTASNIIDMQEGPD-GALYLVHFDDQINRITRMYAAG-----------------MGPAK--------------------------GVD----------------------------------------------------TPPPTNAXXXXXXXXPEV-------PVAETCFAPDNMPELEWTEQAD-GSFSGTLELSAVEMVKGGGTIVTRGFNGMVPGPVIRMQACNTYKLRLVND-QAGWPAGLNADQIGGVNGFHDPTVTNLHLHGLHISGMAPGDS-MDTLLEAGEMNVYTYTIPCEHASGTFWYHPHGHGSTALQADGGAAGMLIVEGAPRESAKFPPAYNAMPEQLLVVQDINTDLLGRLAGYSGDSLFSKSPMMKPFTMVNGCDPADAPADVALAAGQWTKLRMLNVGTQYNSVLSIVPAVPAADP---CDVQLLAKDGVWLSDAPRVITPLDNAINFKLPANALSLFFSLSSRVDVAIRCPAAGMHKIVQQRINDPSCLPGCLKDTYQHPTIATITVGAAAGAPAPALPKLKPCRPGYLMDIVPTAATEQ--VDLTIRVDGFSVNNLPGALYTGVADAAPMTTMTLGQPYQWVIDGSANHPFHAHVNHMMLSVDIQPWDQVQANWHMPGDWLDSISVQGQAPVLIRPDHFSGPMVMHCHIAAHADMGLMGFSTIEG-----KDVVAEDWGTC 808 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5258.12633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5258.12633.1 >prot_H-paniculata_contig5258.12633.1 ID=prot_H-paniculata_contig5258.12633.1|Name=mRNA_H-paniculata_contig5258.12633.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=896bp MSSDICDKVRDTTLGLPLDVDYAALKKKALAGSVDWVPPAFTYRSDTVDEback to top mRNA from alignment at H-paniculata_contig5258:3250..13918- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5258.12633.1 ID=mRNA_H-paniculata_contig5258.12633.1|Name=mRNA_H-paniculata_contig5258.12633.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10669bp|location=Sequence derived from alignment at H-paniculata_contig5258:3250..13918- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5258:3250..13918- >mRNA_H-paniculata_contig5258.12633.1 ID=mRNA_H-paniculata_contig5258.12633.1|Name=mRNA_H-paniculata_contig5258.12633.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5376bp|location=Sequence derived from alignment at H-paniculata_contig5258:3250..13918- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |