mRNA_H-paniculata_contig5251.12625.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5251.12625.1
Unique NamemRNA_H-paniculata_contig5251.12625.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig5251.12625.1 vs. uniprot
Match: D7FKX1_ECTSI (MTS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKX1_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 1.870e-114
Identity = 173/215 (80.47%), Postives = 195/215 (90.70%), Query Frame = 2 
Query:   35 MKLKHLESALSSVTKYSDIGMDNVNIDLEQYSTSAHLAARMVYTAEFEFGDIEGHTVLDLGCGTGMLGIAACMLGAGTVVGVDIDSGALAAAAENASDMDVDLDLVCCDVARNSCVPERFDTVLMNPPFGTRRAGIDVVFLERALEAASTAVYSMHKSSTRKHLLKKAEQWDVDMSVIAQLRFDVPATYKFHKRDSVDIEVDLIRLQKRSSSADS 679
            MKLKHLES L SVT YS++G + VNI+LEQYSTSAHLAARMVYTAEFEFGDIE  +VLDLGCGTGMLGIAA +LGAG VVG+D+DSGAL+AAAENA  M++ +D VCCDVARN C+PERFDTVLMNPPFGTRRAGIDVVFLERALEAA T VYSMHK+STRKHLLKKAE+W VD++V+AQLRFD+PATYKFHKR S+D+EVDLIRLQKR S +DS
Sbjct:    1 MKLKHLESHLQSVTTYSELGAEKVNIELEQYSTSAHLAARMVYTAEFEFGDIEDRSVLDLGCGTGMLGIAAGILGAGAVVGLDVDSGALSAAAENAESMEIGMDFVCCDVARNPCIPERFDTVLMNPPFGTRRAGIDVVFLERALEAAPT-VYSMHKTSTRKHLLKKAEEWGVDITVLAQLRFDIPATYKFHKRRSMDVEVDLIRLQKRLSRSDS 214
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BLAST of mRNA_H-paniculata_contig5251.12625.1 vs. uniprot
Match: A0A835Z882_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z882_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.310e-64
Identity = 123/211 (58.29%), Postives = 143/211 (67.77%), Query Frame = 2 
Query:   35 MKLKHLESALSSVTKYS---DIGMDNVNIDLEQYSTSAHLAARMVYTAEFEFGDIEGHTVLDLGCGTGMLGIAACMLGAGTVVGVDIDSGALAAAAENASDMDVDLDLVCCDVARNSCVPER--FDTVLMNPPFGTRRAGIDVVFLERALEAASTAVYSMHKSSTRKHLLKKAEQWDVDMSVIAQLRFDVPATYKFHKRDSVDIEVDLIRL 652
            MKLKHLESAL  VT YS   ++      ++LEQYSTS HLAARMVYTA  E  DIE   VLD+GCGTG+LGIAA  LGAG V G+DID  ALA AA+NA           C+V     + E   FDTVL NPPFGTRRAG D+ FL  A+  A  AVY+MHK+STR H+LK A +   +  VIAQL FD+PATY  HKR SVD+EVDLIR+
Sbjct:    1 MKLKHLESALQEVTLYSQLQELTGTAPRLELEQYSTSPHLAARMVYTAHMEHDDIEDMNVLDMGCGTGILGIAAAFLGAGHVTGIDIDPAALAVAAQNAER---------CEVQETLDLAEAPPFDTVLTNPPFGTRRAGADIEFLRLAMSLARRAVYTMHKTSTRAHVLKCAREGGAEAEVIAQLCFDIPATYAHHKRKSVDVEVDLIRV 202
[Close]
BLAST of mRNA_H-paniculata_contig5251.12625.1 vs. uniprot
Match: A0A1X2GST0_9FUNG (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GST0_9FUNG)

HSP 1 Score: 211 bits (537), Expect = 1.660e-63
Identity = 111/212 (52.36%), Postives = 148/212 (69.81%), Query Frame = 2 
Query:   35 MKLKHLESALSSVTKYSDIGMDNVNIDLEQYSTSAHLAARMVYTAEFEFGDIEGHTVLDLGCGTGMLGIAACMLGAGTVVGVDIDSGALAAAAENASDMDVDLDLVCCDVARNSCVPERF----DTVLMNPPFGTRRAGIDVVFLERALEAASTAVYSMHKSSTRKHLLKKAEQWDVDMSVIAQLRFDVPATYKFHKRDSVDIEVDLIRLQK 658
            MKLK LES L     +SD       I  EQY T+AHLAARM+YTA+  + DIE   V DLG G G+L IAAC+LGAG  VG DID  A+A A EN  + + ++D V  D++ + C  +RF    DT++MNPPFGT+  G+D+V L++A+E A+ AVYS+HK+STR+H+LKKA++W V+  VIA+++FDVP  YKFHK+ SVDI VD +R  K
Sbjct:    1 MKLKELESILQDCEVFSD-----PKIQFEQYPTTAHLAARMLYTADTVYDDIEDKAVGDLGSGCGILSIAACILGAGYNVGFDIDPDAVAIARENCEEFETEVDFVLTDLSADVCALDRFKGRLDTIIMNPPFGTKNKGVDMVLLKKAVETANRAVYSLHKTSTREHILKKAKEWGVECEVIAEMKFDVPMMYKFHKKKSVDIAVDFLRFGK 207
[Close]
BLAST of mRNA_H-paniculata_contig5251.12625.1 vs. uniprot
Match: A0A851TX84_9PASS (METL5 protein (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A851TX84_9PASS)

HSP 1 Score: 210 bits (535), Expect = 4.020e-63
Identity = 113/209 (54.07%), Postives = 149/209 (71.29%), Query Frame = 2 
Query:   32 KMKLKHLESALSSVTKYSDIGMDNVNIDLEQYSTSAHLAARMVYTAEFEFGDIEGHTVLDLGCGTGMLGIAACMLGAGTVVGVDIDSGALAAAAENASDMDV-DLDLVCCDVARNS-CVPERFDTVLMNPPFGTRR-AGIDVVFLERALEAASTAVYSMHKSSTRKHLLKKAEQWDVDMSVIAQLRFDVPATYKFHKRDSVDIEVDLIR 649
            K+KLK LES L  V  +     +N  + LEQY T  H+AA M+YT    F DIE  T+ DLGCG GML I + MLGAG  VG+DID+ AL     N  D ++ ++++V CD+   S C+P+ FDTV+MNPPFGT+   GID++FL+ AL+ A TAVYS+HK+STR+H+ KKA +W+V M V+A+LRFD+PA+YKFHK+ SVDIEVD IR
Sbjct:    3 KLKLKELESCLQQVDTF-----ENPKLLLEQYPTRPHIAACMLYTIHNTFDDIENKTIADLGCGCGMLSIGSAMLGAGFCVGLDIDADALEIFNSNIEDFELTNVNMVQCDICSLSDCMPDTFDTVIMNPPFGTKHNKGIDMIFLKTALQMAKTAVYSLHKTSTRQHIEKKAAEWEVKMEVLAELRFDLPASYKFHKKKSVDIEVDFIR 206
[Close]
BLAST of mRNA_H-paniculata_contig5251.12625.1 vs. uniprot
Match: A0A7S2RN32_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RN32_9STRA)

HSP 1 Score: 209 bits (533), Expect = 1.250e-62
Identity = 116/217 (53.46%), Postives = 151/217 (69.59%), Query Frame = 2 
Query:   32 KMKLKHLESALSSVTKYSDIGMDNVNIDLEQYSTSAHLAARMVYTAEFEFGDIEGHTVLDLGCGTGMLGIAACMLGAGTVVGVDIDSGALAAAAENASDMDVDLDLVCCDVARNSCVP---ERFDTVLMNPPFGTRRAGIDVVFLERALEAASTAVYSMHKSSTRKHLLKKA-EQWDVDMSVIAQLRFDVPATYKFHKRDSVDIEVDLIRLQKRSSS 670
            +MKLK LE  LS V+ + +         LEQY TSAH+AAR+++ A+  + DIE  +VLDLGCGT ML IAA ++G+G  +GVDID+ ALA A EN  +++VD+D +  ++  +   P    +FDTV+MNPPFGTR AG DV FLE ALE ++ AVYS+HKSSTR  L KKA + W V+  V+AQLRFD+P  YKFHK+ S D+EVDLIRL K   S
Sbjct:   16 QMKLKQLECILSDVSAFRE-----PKYQLEQYPTSAHIAARILFAADSSYDDIEDKSVLDLGCGTAMLAIAAQVMGSGYTLGVDIDTDALAIAQENVDELEVDVDFINANLLEDGPFPLLARKFDTVVMNPPFGTRTAGADVRFLEVALEMSNHAVYSLHKSSTRDFLQKKATKDWGVEFEVVAQLRFDIPKMYKFHKKKSADVEVDLIRLWKGDES 227
[Close]
BLAST of mRNA_H-paniculata_contig5251.12625.1 vs. uniprot
Match: A0A8H7VJV9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VJV9_9FUNG)

HSP 1 Score: 208 bits (529), Expect = 2.630e-62
Identity = 110/211 (52.13%), Postives = 147/211 (69.67%), Query Frame = 2 
Query:   35 MKLKHLESALSSVTKYSDIGMDNVNIDLEQYSTSAHLAARMVYTAEFEFGDIEGHTVLDLGCGTGMLGIAACMLGAGTVVGVDIDSGALAAAAENASDMDVDLDLVCCDVARNSCVPERF--DTVLMNPPFGTRRAGIDVVFLERALEAASTAVYSMHKSSTRKHLLKKAEQWDVDMSVIAQLRFDVPATYKFHKRDSVDIEVDLIRLQKR 661
            MKLK LES L     +     DN  I  EQY T+AHLAARM+YTA+  + DIE   V D G G G+L IAA +LGAG  VG DID  A+  A ENA   +VD+D +  D+ +++   ++F  DT++MNPPFGT+  GID+VFL++A+E A TAVYS+HK+STR+H+ KKA++W VD  V+A+++FDVP  YKFHK+ SVDI VD +R  K+
Sbjct:    1 MKLKELESILQDCEVF-----DNPKIQYEQYPTTAHLAARMLYTADTVYDDIEDKVVADFGSGCGILSIAANILGAGYSVGFDIDPDAIRIARENAEGFEVDIDFILTDLGQDNNKFDKFHFDTIVMNPPFGTKTKGIDMVFLKKAVELAGTAVYSLHKTSTREHIRKKAKEWGVDFEVVAEMKFDVPMMYKFHKKKSVDIAVDFLRFSKK 206
[Close]
BLAST of mRNA_H-paniculata_contig5251.12625.1 vs. uniprot
Match: A0A4P9XQ30_9FUNG (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XQ30_9FUNG)

HSP 1 Score: 208 bits (529), Expect = 2.720e-62
Identity = 111/214 (51.87%), Postives = 157/214 (73.36%), Query Frame = 2 
Query:   35 MKLKHLESALSSVTKYSDIGMDNVNIDLEQYSTSAHLAARMVYTAEFEFGDIEGHTVLDLGCGTGMLGIAACMLGAGTVVGVDIDSGALAAAAENASDMDVDLDLVCCDVARNSCVPER---FDTVLMNPPFGTR-RAGIDVVFLERALEAASTAVYSMHKSSTRKHLLKKAEQWDVDMSVIAQLRFDVPATYKFHKRDSVDIEVDLIRLQKRS 664
            MKLK LES L SV  +++       I  EQY T  HLAA+++YTA   + DIE   V D+GCG G+LGIAA MLGAG ++G+DID  A+  A +NA + ++++D +  +VA +  +P R    DTVLMNPPFGT+ R G+D++FL++ +E A+ AVYS+HK+STR+H+LKKAE+W V+  V+A+++F+VPA YKFHK+ SVDIEVDL+R +KR+
Sbjct:    1 MKLKQLESHLQSVEVFAE-----PKIIYEQYPTRPHLAAQILYTAHTVYDDIEDKVVADIGCGCGVLGIAAGMLGAGHLIGLDIDQDAIDIAQQNAEEQEIEIDFIRTNVA-DDALPIRSGYVDTVLMNPPFGTKTRPGVDMLFLKKGIELANCAVYSLHKTSTREHILKKAEEWGVECKVLAEMKFEVPAMYKFHKKKSVDIEVDLLRFEKRA 208
[Close]
BLAST of mRNA_H-paniculata_contig5251.12625.1 vs. uniprot
Match: UPI000522A59C (methyltransferase-like protein 5 n=2 Tax=Aves TaxID=8782 RepID=UPI000522A59C)

HSP 1 Score: 207 bits (528), Expect = 4.510e-62
Identity = 114/209 (54.55%), Postives = 149/209 (71.29%), Query Frame = 2 
Query:   32 KMKLKHLESALSSVTKYSDIGMDNVNIDLEQYSTSAHLAARMVYTAEFEFGDIEGHTVLDLGCGTGMLGIAACMLGAGTVVGVDIDSGALAAAAENASDMDV-DLDLVCCDVARNS-CVPERFDTVLMNPPFGTRR-AGIDVVFLERALEAASTAVYSMHKSSTRKHLLKKAEQWDVDMSVIAQLRFDVPATYKFHKRDSVDIEVDLIR 649
            K+KL+ LES L  V  +     D+  + LEQY TS H+AA M+YT    F DIE  TV DLGCG GML I + MLGAG  VG DID+ AL     N  D ++ ++++V CDV   S  + E FDTV+MNPPFGT+R  G+D++FL+ AL+ A TAVYS+HK+STR+H+ KKA++W+V M VIA+LR+D+PA+YKFHK+ SVDIEVD IR
Sbjct:    3 KLKLRELESCLQRVDAF-----DSPKLLLEQYPTSPHIAACMLYTIHNTFDDIENKTVADLGCGCGMLSIGSAMLGAGLCVGFDIDADALEIFNSNTEDFELTNINMVQCDVCSLSDSMSETFDTVIMNPPFGTKRNKGMDMIFLKTALQMAKTAVYSLHKTSTRQHIQKKADEWEVKMEVIAELRYDLPASYKFHKKKSVDIEVDFIR 206
[Close]
BLAST of mRNA_H-paniculata_contig5251.12625.1 vs. uniprot
Match: A0A0H5QLC6_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QLC6_9EUKA)

HSP 1 Score: 206 bits (525), Expect = 9.820e-62
Identity = 114/210 (54.29%), Postives = 150/210 (71.43%), Query Frame = 2 
Query:   35 MKLKHLESALSSVTKYSDIGMDNVNIDLEQYSTSAHLAARMVYTAEFEFGDIEGHTVLDLGCGTGMLGIAACMLGAGTVVGVDIDSGALAAAAENASDMDVD--LDLVCCDVARNSCVPERFDTVLMNPPFGTRRAGIDVVFLERALEAASTAVYSMHKSSTRKHLLKKAEQWDVDMSVIAQLRFDVPATYKFHKRDSVDIEVDLIRLQK 658
            MKLKHLESAL  V+++     D+ NI+LEQY TSAHLAARM++T    +GDI G  VLDLGCG GML IA+ ++G   VVGVD+DS AL  A EN  + ++D  +DL+  +V  N    + FDTV+MNPPFGTR  GID+ F++  ++ A TAVYS+HK+STR+H+ KK+ +W V M+V+A +RFD+P TY FHK  S DI+VD IR  K
Sbjct:    2 MKLKHLESALQDVSEF-----DDPNIELEQYQTSAHLAARMIHTMA-GYGDITGRQVLDLGCGCGMLSIASALMGCSYVVGVDLDSHALDRAKENVEEFELDSNIDLIQANV--NGLQLKLFDTVVMNPPFGTRCKGIDMAFVKAGIDHALTAVYSLHKTSTRQHIQKKSLEWGVKMTVVATMRFDLPQTYCFHKSASKDIDVDFIRFAK 203
[Close]
BLAST of mRNA_H-paniculata_contig5251.12625.1 vs. uniprot
Match: A0A7L1Z0D8_9PASS (METL5 protein (Fragment) n=1 Tax=Scytalopus superciliaris TaxID=312124 RepID=A0A7L1Z0D8_9PASS)

HSP 1 Score: 206 bits (525), Expect = 1.270e-61
Identity = 113/209 (54.07%), Postives = 148/209 (70.81%), Query Frame = 2 
Query:   32 KMKLKHLESALSSVTKYSDIGMDNVNIDLEQYSTSAHLAARMVYTAEFEFGDIEGHTVLDLGCGTGMLGIAACMLGAGTVVGVDIDSGALAAAAENASDMDV-DLDLVCCDVARNS-CVPERFDTVLMNPPFGTRR-AGIDVVFLERALEAASTAVYSMHKSSTRKHLLKKAEQWDVDMSVIAQLRFDVPATYKFHKRDSVDIEVDLIR 649
            K+KLK LES L  V  +     ++  + LEQY T  H+AA M+YT    F DIE  TV DLGCG GML I + MLGAG  VG DID+ AL     N  D ++ ++D+V CD+   S  + + FDTV+MNPPFGT+   GID++FL+ AL+ A TAVYS+HK+STR+H+ KKA++W+V+M VIA+LRFD+PA+YKFHK+ SVDIEVD IR
Sbjct:    3 KLKLKELESCLQQVDTF-----ESPKLLLEQYPTRPHIAACMLYTIHNTFDDIENKTVADLGCGCGMLSIGSAMLGAGFCVGFDIDADALEIFNSNIEDFELTNIDMVQCDICSLSDSMSDAFDTVIMNPPFGTKHNKGIDMIFLKTALQMAKTAVYSLHKTSTRQHIQKKADEWEVNMEVIAELRFDLPASYKFHKKKSVDIEVDFIR 206
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5251.12625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKX1_ECTSI1.870e-11480.47MTS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z882_9STRA2.310e-6458.29S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A1X2GST0_9FUNG1.660e-6352.36S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A851TX84_9PASS4.020e-6354.07METL5 protein (Fragment) n=2 Tax=Passeriformes Tax... [more]
A0A7S2RN32_9STRA1.250e-6253.46Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A8H7VJV9_9FUNG2.630e-6252.13Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A4P9XQ30_9FUNG2.720e-6251.87S-adenosyl-L-methionine-dependent methyltransferas... [more]
UPI000522A59C4.510e-6254.55methyltransferase-like protein 5 n=2 Tax=Aves TaxI... [more]
A0A0H5QLC6_9EUKA9.820e-6254.29Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A7L1Z0D8_9PASS1.270e-6154.07METL5 protein (Fragment) n=1 Tax=Scytalopus superc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5251contigH-paniculata_contig5251:661..5181 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.1
Seed ortholog evalue2.3e-92
Seed eggNOG ortholog2880.D7FKX1
Preferred nameMETTL5
KEGG koko:K07579
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DNA repair
EggNOG OGsCOG2263@1,KOG3420@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons5
Model size1170
Cds size654
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930524.776107-UTR-H-paniculata_contig5251:660..6941622930524.776107-UTR-H-paniculata_contig5251:660..694Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5251 661..694 +
1691481331.4674695-UTR-H-paniculata_contig5251:660..6941691481331.4674695-UTR-H-paniculata_contig5251:660..694Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5251 661..694 +
1622930524.8838346-UTR-H-paniculata_contig5251:4699..51811622930524.8838346-UTR-H-paniculata_contig5251:4699..5181Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5251 4700..5181 +
1691481331.5387683-UTR-H-paniculata_contig5251:4699..51811691481331.5387683-UTR-H-paniculata_contig5251:4699..5181Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5251 4700..5181 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930524.7972436-CDS-H-paniculata_contig5251:694..7891622930524.7972436-CDS-H-paniculata_contig5251:694..789Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5251 695..789 +
1691481331.4837058-CDS-H-paniculata_contig5251:694..7891691481331.4837058-CDS-H-paniculata_contig5251:694..789Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5251 695..789 +
1622930524.8133733-CDS-H-paniculata_contig5251:1977..22341622930524.8133733-CDS-H-paniculata_contig5251:1977..2234Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5251 1978..2234 +
1691481331.4999275-CDS-H-paniculata_contig5251:1977..22341691481331.4999275-CDS-H-paniculata_contig5251:1977..2234Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5251 1978..2234 +
1622930524.8289304-CDS-H-paniculata_contig5251:2826..29121622930524.8289304-CDS-H-paniculata_contig5251:2826..2912Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5251 2827..2912 +
1691481331.5093963-CDS-H-paniculata_contig5251:2826..29121691481331.5093963-CDS-H-paniculata_contig5251:2826..2912Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5251 2827..2912 +
1622930524.8514488-CDS-H-paniculata_contig5251:4072..41201622930524.8514488-CDS-H-paniculata_contig5251:4072..4120Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5251 4073..4120 +
1691481331.5191588-CDS-H-paniculata_contig5251:4072..41201691481331.5191588-CDS-H-paniculata_contig5251:4072..4120Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5251 4073..4120 +
1622930524.8671715-CDS-H-paniculata_contig5251:4531..46991622930524.8671715-CDS-H-paniculata_contig5251:4531..4699Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5251 4532..4699 +
1691481331.5292737-CDS-H-paniculata_contig5251:4531..46991691481331.5292737-CDS-H-paniculata_contig5251:4531..4699Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5251 4532..4699 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5251.12625.1prot_H-paniculata_contig5251.12625.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5251 695..4699 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5251.12625.1

>prot_H-paniculata_contig5251.12625.1 ID=prot_H-paniculata_contig5251.12625.1|Name=mRNA_H-paniculata_contig5251.12625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp
MKLKHLESALSSVTKYSDIGMDNVNIDLEQYSTSAHLAARMVYTAEFEFG
DIEGHTVLDLGCGTGMLGIAACMLGAGTVVGVDIDSGALAAAAENASDMD
VDLDLVCCDVARNSCVPERFDTVLMNPPFGTRRAGIDVVFLERALEAAST
AVYSMHKSSTRKHLLKKAEQWDVDMSVIAQLRFDVPATYKFHKRDSVDIE
VDLIRLQKRSSSADSDR*
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mRNA from alignment at H-paniculata_contig5251:661..5181+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5251.12625.1 ID=mRNA_H-paniculata_contig5251.12625.1|Name=mRNA_H-paniculata_contig5251.12625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4521bp|location=Sequence derived from alignment at H-paniculata_contig5251:661..5181+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTCTGGGGTGCACTTGTTGCGTAGCCTGGAAAGATGAAGCTTAAACACC
TGGAATCTGCACTATCATCAGTGACCAAGTACAGTGATATAGGGATGGAC
AATGTCAACATAGACCTGGAGCAGTACAGGTTTGTAATATGTTTCACCTA
TAATAATACTGGCGAGGAAGCTGCTTCCAATGTCTATGCCTCTCGTCGTG
AGCATGTATCTTGAAATCACCAAGCCTTCGCGAGATCTGTATGAAATTCC
TCCGATAGACTGTTACTCTGAGGTGCTATCCGTGTTGGGCGTAACATTAA
TCAACGCTTATATTTTTGTGTTTTCTGCGTGTCAACAGCCTCAGCTAGCT
TTGACTTTCAAACAGACACAAACAGTGTAATTTTGCTGGTATTGGCATGG
AGAAACAGACAGATAGACAAAAGGCAGGCAGGGTGCGGGTGGTTACTCAA
GGACGATACAGTACTGAACCTTTTAGCCGGACGGTGTTTTAGAACAAAAC
AAACATATAGACACTTTGGCTGCAGAAGGGCAGGGGGGCTCATTTTTCGT
TAAGGGGGCGAGGGTTTGGGCCTTATAGTACTGGACTACGAAGAAATACG
ACCGCGATTTTCCTGTCGTGTGATTGGTTTTGGCCAACCACAAGACATTT
TTTCACCTACACAGACAATCCAAATCGGCAATTGATATATACACCAGTCG
ACTTGGTTTGGGCATAACCTCCAACTATCCCTCACCCGCTCTTAACCAGG
GGTGACTACACGATCGACTGAGGATATTTCTCACAACAAAAGTATCGTAT
GGGCTGGATGCATGGTCCATATGCGTGTGGCAACTACTGTGACATTTATC
GTTGACTATATTCATGGTTGTGGTGCATGGATACCGCTTCGTGAGGACGT
GCTTCGTTTGATTTCATGCCCTGGTGTGTGTCTTCGTATGGCACACATAC
TGCTGCATTATTAGTCAATCAGCGTGTGGCTTGTGTTTTGCGTTCTTATC
GAGGGTTGCAGTTGTGCTGCGCGAACCGTGACAAATTCTGTCTTTGCTGT
TTGCACTGGGTGTAGGAATCTAAATGGCAACAGCTACCTCCCATCTGCGT
GATCATGTCATGGCCGTTGCGTCAGAAAGAATCTGACCTGATTTCTCTTG
CTTTTCAAACTGAGGATTATTTTTGCACATTACCTTCGAACCGGCGCCCC
AACGGCTGCATATTGCAGTAGCCGCTTCCCCACAAGGTAGCGTACATGGT
CCACTGCTCCATTCCCTCGCGTTTTATCTCGCGTGTTATTCTTTACGACT
ATAATCTGTGCGTGTAGTACGTCAGCCCACCTAGCGGCACGAATGGTGTA
CACAGCGGAATTTGAATTCGGGGACATCGAAGGTCATACGGTGCTCGATC
TAGGCTGCGGCACAGGGATGCTTGGAATCGCAGCTTGCATGCTGGGCGCA
GGAACTGTGGTGGGAGTGGACATCGATTCGGGCGCACTAGCCGCTGCAGC
GGAGAACGCGTCCGATATGGACGTTGATTTGGATTTGGTGTGCTGTGATG
TTGCTCGAAACTCATGTGTGCCAGGTGATTCCAACTTCCGTGCTTAGCTT
TTTATCCCCGTAGGGAAGGAGGCTCATTTTGGAGGTGTTTATTCGTATGG
CTACGTAGTGAGTTCCTGTAGTTGTCAATGTAGGCCTTTTCGGAGTTCTG
CCTCCTCATGTTAGCGAAGCAATTGCCGCTGGCGATTTTCTCTTGGCTCT
TCAGTCAAGGCAAGAGAGGTAGGTACTCGTTTTGGCACGGGATATTTTTG
TGTACGCCATCCTTCGACTTGCTGTGCTTACACAGGAGGATACCATGGCT
AGATTCACCAGGTCATGCAACCATATCCCTGATCATAAAATTGCGTACCC
CGGAAGGGCGATCGCTTAAGTGGGGCGAAAAAAGGGTATGCTCTATCTTA
TGCTGTGGGGTCAAAGGAAAGCCTTGGGTAGAGTAAATCCACAATCCCGA
GTTGCTTCGTTCTTCTCTCTCTTTCATAGGATCACTCTATGGAACTCTGG
CACTGTCGGATGTTAGTACAGTAGTCTTCTGCCCCGGTGAGGCGCCAGTT
GACGCTATCTGTCTAATAGGCACCGACTCTGTACACCCGAACTCCCCCGT
CTCTCACTTCTGGCAGAACGATTTGACACGGTGCTCATGAATCCTCCATT
CGGAACTCGAAGAGCTGGCATCGATGTTGTATTCTTAGAGCGGGCTCTTG
AGGTACGCACCCGTGCTGTCTGATTTTTCAAACTCTTGACATAGGAATCT
CTTCTGTACCTGTTTATATTTATTCATGAAGTACTGCATAGGGTCGATCC
TTGGTTCACATGGGCGCAACGCAGAATTTCCAATAACTAGGATTTGTATT
GATACCGATATCTCGTATTTATCCGCAATGACACTTGCCGTTACCGTCTA
TAAAATACTACGTGTTTATCATTATCCATGAGGTAACGATGTATCGTCCG
GTATCCATGGACTACATGGTTTATCATTACCCAAGTTCCGAAGGAGAACT
GATCAGCAAAAAAGAAAATTAGAATCATAAATACATTTGAAAAAAAAAAC
TTGAAGCAAGGGGTAAGTAACATTTGCACAGTCCCGGAGTCTCTTCTTGC
CAGCATGTGTTTTTTTTTGCTTATTTTTTGGCATCAAATAGATGATACGA
AAACCATCCAGTTACCGTTAGATGTATCAGAATTGCCTGTTAATACTCGA
GTGTCACCTATCGGGTGCTCTGGACGTTTTTTTTGCCTATTTAAACTCCA
TGTGAACGTGGAAGCAACTCGGCCGGACAATTAAGGGTTCGCAAGCACCA
CTTTGTGATTCTTGGCTTGTATGTGTACGCCAATGTGTTGGTCGAAGTCT
TGTCTCTGCTGTTGGTGCTTTGCCCCCCTGCCACAAAATTGTTCGGCCTG
ATGGTGAACCGAGATAAGCTCGAATCGCCCGTCCCCCAAGGAATTAAAAG
CTTCGCCGCTCGCCTAGGGATGCGCGCAACAGCCGATATTTTCTCGATGT
ATGGACTGTATTTATCGTTTCGATTTTTCCCACTGATACACAACCTTAAT
GTTTTAGTAGTCGTATACCTTTACCACCTGACGACGAACTTTGCTCTTTC
AAAATCACACAACCGACTTCTCGTCATTTGGAGCCGTGCTGATCTTGCTC
TAACCGCAGTAAAAGACACTTTGCGGGAACGTTCGGTATCATACGGTATT
TGCCACAAGTTGTGTATCGGAGAAAACTGACGTCCCACGCACGTGGAGCC
TATCCCCGAAGGTCGCAACGCTGAACGAACATTATTTGGGGTTATCGATG
CCCCAAAGTGAGTACCTTCCTCGGCTCCCACAACTCGTTTGATTTGGCCG
TATCTACGCCAGGCGGCTTCGACGGCGGTGTACTCGATGCACAAGTCTTC
CACCAGAAAGGTGAGACTGACCATGACTTCTTGTAAGGGCTTCTGATCTC
TTCTGGCCTCTTTACTTTCCTTGGGGGGGGGCTTTTCGCTGATTCGCTCA
TTGTAGGGAATTCTGCCCTCTTTGATTGTTTTGCCCATACGTACGGAGTA
CATCGTGCGGAAGACATTATGCGAAGCCACATTCATTATTGACGAACTCA
TTTCAGTTGGGGAGTGATGTAGTGTAGCTGTGGTTCTAAGCTGTGCCATT
AAGGCCCGACTCAGCCCATATCCCCCTGAATCGCGGTCACTGTAGCAATG
CTACAACGATAACCCCGTATGGTGTAGCAGTAGTCAACCTATGTTTCCTG
ACTGGCTCTTCATCCTTCTCACGTATGTATTATGGCGCTCCTCCCTCCTG
TGCCTCATTTTGCCCTTGCAGCACTTACTCAAAAAGGCTGAGCAATGGGA
CGTCGATATGTCCGTGATAGCTCAGCTTCGCTTCGACGTTCCTGCCACAT
ACAAGTTTCACAAGCGCGACTCGGTGGATATTGAAGTGGACCTCATCAGG
CTTCAGAAACGATCGTCTAGTGCAGACTCCGATAGGTAGCTCTCTCTACT
CTATCGATTTTTGAGTAGGCGAGGGCAAGGGATGAAGCTCGCGGCACTTC
ATCTACATGATGCACTTTTATCGAGGTTTTATCGCTTTGGAGGCATGTTG
TACATGAAAGGGGAGAATAAAAGCATGCCCGCAATGAAGTGATCGGTCAC
TTCTTATAAAAGGGACGATCTGATTGGTCTAAAAACACGTTGACAAGTGA
CATCACTCATGGCAATGATGACTCTTTGGGGAAGTGGACTTGGAAAGGTG
CATCTCGTGTTTTTTTAAACATTTTAGGGTACAGTACGCAGTGACGTTTT
CGTAGGGTGCCTCAGGCCAAATTAGTCGCTGTTTTGGTCATGTCATCGCA
GGCGCCGCAATGATGTATGCTCTGATGCTCTGTCAACGCCAACTCCGTCT
TTGTCTTTGTCTCTCTGTCTCTCTCTCGCTGCAAATGCCGTTAGCTCGGG
CGTAATCTCTACCAACGAACA
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Coding sequence (CDS) from alignment at H-paniculata_contig5251:661..5181+

>mRNA_H-paniculata_contig5251.12625.1 ID=mRNA_H-paniculata_contig5251.12625.1|Name=mRNA_H-paniculata_contig5251.12625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1308bp|location=Sequence derived from alignment at H-paniculata_contig5251:661..5181+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCTTAAACACCTGGAATCTGCACTATCATCAGTGACCAAGTACAG
TGATATAGGGATGGACAATGTCAACATAGACCTGGAGCAGTACAGATGAA
GCTTAAACACCTGGAATCTGCACTATCATCAGTGACCAAGTACAGTGATA
TAGGGATGGACAATGTCAACATAGACCTGGAGCAGTACAGTACGTCAGCC
CACCTAGCGGCACGAATGGTGTACACAGCGGAATTTGAATTCGGGGACAT
CGAAGGTCATACGGTGCTCGATCTAGGCTGCGGCACAGGGATGCTTGGAA
TCGCAGCTTGCATGCTGGGCGCAGGAACTGTGGTGGGAGTGGACATCGAT
TCGGGCGCACTAGCCGCTGCAGCGGAGAACGCGTCCGATATGGACGTTGA
TTTGGATTTGGTGTGCTGTGATGTTGCTCGAAACTCATGTGTGCCAGTAC
GTCAGCCCACCTAGCGGCACGAATGGTGTACACAGCGGAATTTGAATTCG
GGGACATCGAAGGTCATACGGTGCTCGATCTAGGCTGCGGCACAGGGATG
CTTGGAATCGCAGCTTGCATGCTGGGCGCAGGAACTGTGGTGGGAGTGGA
CATCGATTCGGGCGCACTAGCCGCTGCAGCGGAGAACGCGTCCGATATGG
ACGTTGATTTGGATTTGGTGTGCTGTGATGTTGCTCGAAACTCATGTGTG
CCAGAACGATTTGACACGGTGCTCATGAATCCTCCATTCGGAACTCGAAG
AGCTGGCATCGATGTTGTATTCTTAGAGCGGGCTCTTGAGAACGATTTGA
CACGGTGCTCATGAATCCTCCATTCGGAACTCGAAGAGCTGGCATCGATG
TTGTATTCTTAGAGCGGGCTCTTGAGGCGGCTTCGACGGCGGTGTACTCG
ATGCACAAGTCTTCCACCAGAAAGGCGGCTTCGACGGCGGTGTACTCGAT
GCACAAGTCTTCCACCAGAAAGCACTTACTCAAAAAGGCTGAGCAATGGG
ACGTCGATATGTCCGTGATAGCTCAGCTTCGCTTCGACGTTCCTGCCACA
TACAAGTTTCACAAGCGCGACTCGGTGGATATTGAAGTGGACCTCATCAG
GCTTCAGAAACGATCGTCTAGTGCAGACTCCGATAGGTAGCACTTACTCA
AAAAGGCTGAGCAATGGGACGTCGATATGTCCGTGATAGCTCAGCTTCGC
TTCGACGTTCCTGCCACATACAAGTTTCACAAGCGCGACTCGGTGGATAT
TGAAGTGGACCTCATCAGGCTTCAGAAACGATCGTCTAGTGCAGACTCCG
ATAGGTAG
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