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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-02_002080.1 |
| Exons | 2 |
| Model size | 928 |
| Cds size | 927 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5239.12604.1 >prot_H-paniculata_contig5239.12604.1 ID=prot_H-paniculata_contig5239.12604.1|Name=mRNA_H-paniculata_contig5239.12604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=309bp
LPTGTGSVTVATETPSMDQRRKHSPPSTPPRSCSPSFWLLSITVAVVVSS
NNNYAAVAFKSQWSPSLLLPPRLHPAAVQTTWPAAATSTAPSSPCYSLKY
NQHAWNVRNAHRCSQCRTPRATQQHRFSARSAPTAATTTITSTPGMSIFV
GNLKVTVTEHVSYTGNDLRVEAWRMDVRTGKSRTWSSRRSEEDFTRLGLA
LRGVLGPDNVPAPPLPSSSPAVLEGYLGRLLQVPGAVNAVYEFLEEKEPV
LQGEIVSADFLRNQRFRSADPDAQRTIPGQTSSAAETAGGRPRTAGDKAG
ATVAGAVMG back to topmRNA from alignment at H-paniculata_contig5239:6752..13146+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5239.12604.1 ID=mRNA_H-paniculata_contig5239.12604.1|Name=mRNA_H-paniculata_contig5239.12604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6395bp|location=Sequence derived from alignment at H-paniculata_contig5239:6752..13146+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGCCCACCGGTACTGGGTCGGTGACTGTGGCGACAGAGACACCAAGCAT
GGACCAGCGGCGAAAACATTCACCACCTTCTACCCCCCCTCGCTCTTGTT
CGCCGTCTTTCTGGCTTCTGTCCATAACCGTCGCGGTGGTCGTCAGCAGC
AACAACAACTATGCTGCTGTCGCTTTCAAGTCCCAGTGGAGTCCGTCTTT
ATTGTTGCCCCCTCGCCTACACCCTGCAGCCGTGCAGACGACATGGCCTG
CTGCAGCGACCTCTACCGCACCGTCCTCCCCCTGCTACAGCCTGAAGTAC
AACCAGCACGCCTGGAACGTACGTAATGCCCACCGCTGTTCTCAGTGCCG
CACCCCACGAGCCACGCAGCAGCATCGCTTCTCTGCCAGGTCCGCACCAA
CAGCAGCTACTACTACTATTACTTCCACTCCAGGGATGTCTATTTTTGTC
GGAAACCTCAAAGTCACGGTGACGGAACATGTCTCCTACACGGGGAACGA
TTTGCGGGTCGAAGCATGGAGGATGGACGTGAGGACTGGAAAGAGCCGCA
CGTGGTCCTCTCGGCGCTCGGAAGAAGACTTTACGCGACTGGGCTTAGCA
TTGCGGGGTGTGCTGGGTCCCGACAACGTGCCGGCGCCGCCCTTACCCTC
GTCCTCTCCAGCGGTGCTGGAGGGGTACCTGGGGAGACTGCTGCAAGTGC
CTGGCGCTGTCAATGCTGTGTACGAGTTTCTTGAAGAAAAGGAGCCTGTC
CTGCAAGGAGAGGTGGGTACATGTGCATGGGATGGACGGGCGGGGGGGCT
CATGGCGTTAGTACACATGGGGGTAACGCTGGTCCTTGTAGCGCGCGTCG
AGTCGTGGCCGGCGTGATGGCTGTTATGGCACATGTGATGGAAATCTGGA
CACAAGTTCATGGTTGAGGACTCGGGACACGTCTTCTTGCAAGTTGCGTA
CCGTAACCGTTTTTCGTTATTCAGCCCATCTCTTATAGGGTAAAAAAAAA
ATCTCCAATCATAAATATAAAATGCTATTTTTCGATCTGCAAAAATCTAA
TAATGAAAAATTGATTTATCTCATCTTATATGGTAAAAAAATCAGGAAGC
AGTTTATTGGAGGTTTGGTGGCGTTTTGTAGCTGGCGCAATTTCGCGAGA
GAATTTCAAATATTCCAGGCCTCGTCCAGCAGCACACAGCACATCTTCAT
CCTTTGAAAGCGGACCACCATGAATGTACCATCCACCTCAATGCACATCA
AGACGAACCCATACGTTGAATGGGTGTGGAAGGAACTGAGGGCTCAAGGG
CTCATCACGGTCGTCTTCGCGCTCAGCCTTCTCAACCGCCGCAAGGGTGG
GAAGAGAAAGCGCCTCTGCACCCAGCAATTGAATGCGCCTGTCCTCTTCG
TCCATGTATTCGACAGCCTCCACTACAGCGCCAACGTAATAAACGTATGC
AATTCCTCCAGATTTGCCATAGGGCGGCCGGGCTCACACGTTGGATATGT
ATGTGTCCTCGTGGCCTCTGCGACCAGCGTAAGGGTCCCACTGTCTGCTG
TGAAAGATCAATAATCTGAGAGGAAATACGAGTATAGCCTGCGTATCTCG
TTGAATTCCCTGAAAATTGATTCTGTTGATCGACTGCCAGGGCATTAAAA
AAATTGCCAGATTTTTGTAGCTGGAGGCTGTCGGTCCTCCCCAAACGTTT
TTCTCTCGACAATTTTTCGAGTTTATTTACCCTATATAATGAGGAATAAA
AAATCTCTCAAACGAAAAATTCAAATTTATGTTTTTGAGTGTGTTTTTTT
TACCCTGTAAGAGATGGCCTCATGTTATTTTTTAAGGTTGTATCGCGCTG
ACTACTGACTGCACGTGCCCTTTTTGTCGTGCGGTGTGATGTGATTTCAA
AGATTCAAATTATCAAAAGGTTCAAATGCAAGCGTTGTGTCGGACCCGTG
TATCCCCGTTATTTTTAGTATAGGAGCGTCAAAGCCCCAAGCTCGGAAGC
GCGGTTGGTTGCCCCTTTCAAAGTTTTCTCACCTGAAATTTTCTTCTTTG
AAACCTGACAAGCGGCGCAGCGCAGAGTGCAGCATGTGGCGGGTGAACTG
TCAGCAGTATTTAGATGCGCTTCGTTTGTTTTTTTTAGGAGAATTTTCGA
GGAGGCAAATTAGTCGGGCTCTTTATTGGTTCGTTGAACGCACATAATTC
GAGAATTGAATATTGGAGGAAGCAATACACCAATACATTTTCACATATAT
ATCGATGCCGATATATTTTTAAGGGTATTGGTGCGAGCGAAGCGAGCATG
CCGCGCAAAGCGCCAAGCCAATGCGTTAGTACAAGTAGCCGAGCGACTTG
CCGCATGTCCCAACGGCCCCTCCTGGCCGGTGGGGAAACCTCGCTGGAGG
CACCGCCAGAGGCAGAAAGATCAGCGTTTTGGCTTCATCTCTCTCTTCAA
ATCGAAAAGTGTAAGTTCCTCCAGAGCTGTAAAATTTCCCGCGGTGTTCT
CGGTATCTCGCAGTACTTTTTCGGGATTTGTGGAATCGCCCACGAACGGC
GCACTATTAAGAAAAACATGGTTCTAGAAGCACCGCAATAAAGGCTGCAC
TCCGTGGGATTAAAGTCTTGGCGATACTTGCTCCGATGTCTAAGTGAATA
CTCTGCTATGACCACGGTAAAATTTTAACAGTGTTTAGAAATTGGTTTAC
CGCGGTAAAGTACCGTGCACTGTATTTCGAGGATAATATGATCCGTACGT
GGACTTCGAAAAAAAACTAACGTCGAGATATTTATTCTCGCAGGGTGTAT
CTTTATCATAGTACTTCTAGAACCATATTTTCCCTCATTTGTGCTCCTTC
ATACTGTACCCGGTTTCATATATTCCGAAAATGTACTGGCAACACCCCTA
GAAATTTGTTTAAATGGCCGGGGTTTTGTTTAGAAATGAGAGTAGAAGAT
TGTGGGTTCAAAATCAGACTCCGAATGAGGGGGTTCGTCGGCGTCTCCAG
CGGGGATGCTGATAAAAGGCCGTGGTGGTGTTTCTTGAGATTTTTGGGGA
GCTCTTGCTGCTGGCTGCGCATCTCGCGTATCGATGTGTGAAGTGCAGAT
GTTGGATGCAGTTGTTGGATTATGACTTGCATATATACATTCAATGAAAA
ATGATCAAAGCATATGGGAAAAGCAGCGATATACGAACAGGTTTTCTTGT
TATAGCAACAATCAATGTACATTGGTATTGCAATGTGCCAATATCTTATT
TTATGTATTGTTCCAATACAAAGCCCTACAAATCCGAGGATGCCTGGAAA
TTAGAACTAACGGGGTGAGGCGACCCGGTGCTTCTGCAAGGCCATCACAG
GGGGGGGGGGCAGCGGAATCCCTCCAAGGCATCAACACCAATGTAGGAAC
ATGTAGACGACAGCCTGGAAGTTACAGGCCAAACGGATGACAGCATCCTC
TCTCGCGAGCGTGCATGGACAAACCTTACAACATGAGAGTGAGCGATTGG
CGATCATCGGAAATCGCTCTGATAGGAACGAAGCTCCGTTCTCTCGAGGA
CGCGTGCTCAACGGTCTATATTGTAACTACTATGGCATGCAAAGCATGAG
CACCTCCCCCCCCCAACCTTCGTTTCTACGTTTCACCCCCTGGACGAACA
CGAACACTTGGAATAATTTAGACAACAGATTTGGAAAGGGTTTGTTATTA
TTTTTCTGAGTTTTTCAGGATGCGCAGGCGCATACATGGAAAAAACGTCT
TCACCCACCTGTTTATTCCTGATTAATAGTATTCGGAGCAGTCGTAAATG
GATGGTCCAGGGGCAAAAAGAACAAAACATGCTCGTGTCGAATGAAACTC
CGTTGCACCCATGTTGATTGAGGTCATCGGGCTTACTTGTCAACTTTAGC
TTTATACACTCGTCAACAAAATTACATCAATAGGGGGCACTTTTGGAGCA
TGACGCTCTTCTCAGAGTGGCTGCAGATCTCTATCGCGGCAGCTCTTTTG
TCCTAGCTTCTTGTTTGTTTTGTGATGCATGCGTACATGGGCCGTTTTCT
TGCTTTTGGAGCATGACAAGTATTTATCGGAACTATTAAGGAGTAAAATA
TCACCACGGCTATACTCCTGTGCAGTTCGTGCTTATCTTCGACCCACGGA
CTCATTGCGCTGGCATGGAGATTCGTTTTTAAAGATTTACTTGAGCACAG
GCTTGAAAATACGTTTCGAATATTCGATCACCAGGAGACCACCACCTTGT
TTATACGGCATTAAATAATAGGGAAAAACCCGAGAGAGGGGCAGGTATCC
TATCATTGGACGAGGAGAAACAGTCGTATCGTACAACTCTTGCTTTCCGC
CTTGTTTTATTTGCATGCGCCATGGCCCACCACTCAAAAAAATAGTAATA
TTAATAGTAATAATAATAGTAATAATAATAATATTAACTAAATCACGTAT
CTGCACGCCGAAGGTAAAAACTTTACAAGTTCAAACATGAATCAAATGTT
ATTTAGCAGAAAATTGTTGAATTTTTTGCCTCAACCCTTTGAATCCTGGG
GGGCTATTGGTGTGACATTCTCTGACATGTGAAATTTGGTAATCTCACGC
TTTACGTTGGGGGCGGGCTACACTTTGGGGGCGGGCTACACTTTGATGGG
GGGGCGGGGGCGAGTACCGATTTGGGATGGACGAAATTTGTTTCGGTAGG
GATGACATCACAGGACTGTCCCGCCAGATGAACATAACCATGGGACATAA
CAAGGAAAACGTACCACGAAATGAGTAGTACCTAGGGACACTAGGAGCGA
AAGGGGTCAAAGTTACTATTCTCGTTACAAGCATTGCTTGTCCACTGTTG
GTTTGCTGGAGCTACAACGTTATGTGCTTGACATTTTGACGTGATTGTAG
TACAGCAGACTGTAGTACGAGCTGTGGCAGGCAGCTGTACAGCGCGAGCG
GCATGATTCAGTCAGCAGAGTTGCTCGAGGCCACCGAAGGAAGAGACAGT
AAAGTAGAATGCATACAACAGTCGGTGTACTGCTACAGTTATCATGCGTA
TCTATCTGCTCGTTGACACTGGGATGACGATAAGATGGTGGAGAGAGAGA
GAGATAGGTCGTCAGGCATCGGCATCTTCCGAGAGTTCCCTCGCGCGTAA
TAGCCGCTGCGTGTATCGCGCTCTGTTATGCGCGATGGGACCCACAGACA
TAGCAAGTGTTAGCCCGCCACAGCAGTCATCGCAGTCGGAACATGACAGC
ACATGTGATGACAAGGTTGGTAATTCGGCGTTGGGTTTCCTGAAAGAAAA
ATGTTCTTGCCGTCGACATATATGTATATATTTCTAGGGTTTCAAAGGAT
TGAGAAAATATTCGAAATTCATTCAAAATTCATTCAAATTCACCAAGCTT
TCTGTCAGATCGAGGTACAAGAACAAAATAAGCAGCAAGGATTTCGGGTT
GGGCCGATTCAACCCCCGCTTAATATCGGGCAGCTGTTGTGCCCGCAGAT
GGGGGGAAGGCTTGGAGATCAGCTACATAGTCTTAGCATGGGTACAGTGA
AGGTTTTCTACTAGCCTTGTAGGCAAGTGGTTTCATTTGTGAATGCCCCC
CCCAGGTTTTTGTCATGTTGTGCATTAGTAAGTAACACAGCAGCTTTAAA
GATTATGACTGTGATTACCTCCACTTTTGGTTTTCACACGGTTGTTGACT
TGTCATCTTTTACTCCTTTTGTTTTTGCTCGCCTGACCTCTTCCCAAACA
GCATTCTCATATAGTGCAGATGGTGTCCTGGTGGTGAAGCTGTCCTCGAT
AATTGGCGCATGTGGTGATGTCGCAATGTTGTACCTACCCCCTCCCCAAC
CGCAGGACTACTCACTTTACCCCCCCCCCATCGTCCCATCGTCCCATACC
CTTACTCATCAATCCGTACACCCCACTCCACTATACCTCACAATAACCAT
TCACTACCAAACTTTAAAACATAAAAAGCCGGCCTGCGCGCGCTATCTGT
GACCCCTCCTCCTCCCCCCCTTTCAGGTATGTAAAAAATAGAAAGTGAAA
TGAAAGCAAACGAATTCTGTAATTATCGACATATTATGAAAAATGTTATT
GCTCAAAGAGGGATTTTGAACTTTCCATTGCTTACGTTCCCCTTTTCCCC
CCCCCCCCCCCCCCCCCCCCCCTGGCCTACTACTTCCTTTGTACTCACCA
CCTCTTTGCTCTCTACCTGATCGATTCAGATAGTGAGCGCCGACTTCCTC
CGCAACCAGCGCTTTAGAAGCGCCGATCCCGACGCGCAACGCACCATCCC
TGGACAAACGTCCTCGGCGGCAGAGACAGCAGGGGGACGGCCGCGCACGG
CGGGAGATAAGGCGGGGGCAACTGTCGCCGGGGCGGTGATGGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5239:6752..13146+ >mRNA_H-paniculata_contig5239.12604.1 ID=mRNA_H-paniculata_contig5239.12604.1|Name=mRNA_H-paniculata_contig5239.12604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1854bp|location=Sequence derived from alignment at H-paniculata_contig5239:6752..13146+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGCCCACCGGTACTGGGTCGGTGACTGTGGCGACAGAGACACCAAGCAT
GGACCAGCGGCGAAAACATTCACCACCTTCTACCCCCCCTCGCTCTTGTT
CGCCGTCTTTCTGGCTTCTGTCCATAACCGTCGCGGTGGTCGTCAGCAGC
AACAACAACTATGCTGCTGTCGCTTTCAAGTCCCAGTGGAGTCCGTCTTT
ATTGTTGCCCCCTCGCCTACACCCTGCAGCCGTGCAGACGACATGGCCTG
CTGCAGCGACCTCTACCGCACCGTCCTCCCCCTGCTACAGCCTGAAGTAC
AACCAGCACGCCTGGAACGTACGTAATGCCCACCGCTGTTCTCAGTGCCG
CACCCCACGAGCCACGCAGCAGCATCGCTTCTCTGCCAGGTCCGCACCAA
CAGCAGCTACTACTACTATTACTTCCACTCCAGGGATGTCTATTTTTGTC
GGAAACCTCAAAGTCACGGTGACGGAACATGTCTCCTACACGGGGAACGA
TTTGCGGGTCGAAGCATGGAGGATGGACGTGAGGACTGGAAAGAGCCGCA
CGTGGTCCTCTCGGCGCTCGGAAGAAGACTTTACGCGACTGGGCTTAGCA
TTGCGGGGTGTGCTGGGTCCCGACAACGTGCCGGCGCCGCCCTTACCCTC
GTCCTCTCCAGCGGTGCTGGAGGGGTACCTGGGGAGACTGCTGCAAGTGC
CTGGCGCTGTCAATGCTGTGTACGAGTTTCTTGAAGAAAAGGAGCCTGTC
CTGCAAGGAGAGTTGCCCACCGGTACTGGGTCGGTGACTGTGGCGACAGA
GACACCAAGCATGGACCAGCGGCGAAAACATTCACCACCTTCTACCCCCC
CTCGCTCTTGTTCGCCGTCTTTCTGGCTTCTGTCCATAACCGTCGCGGTG
GTCGTCAGCAGCAACAACAACTATGCTGCTGTCGCTTTCAAGTCCCAGTG
GAGTCCGTCTTTATTGTTGCCCCCTCGCCTACACCCTGCAGCCGTGCAGA
CGACATGGCCTGCTGCAGCGACCTCTACCGCACCGTCCTCCCCCTGCTAC
AGCCTGAAGTACAACCAGCACGCCTGGAACGTACGTAATGCCCACCGCTG
TTCTCAGTGCCGCACCCCACGAGCCACGCAGCAGCATCGCTTCTCTGCCA
GGTCCGCACCAACAGCAGCTACTACTACTATTACTTCCACTCCAGGGATG
TCTATTTTTGTCGGAAACCTCAAAGTCACGGTGACGGAACATGTCTCCTA
CACGGGGAACGATTTGCGGGTCGAAGCATGGAGGATGGACGTGAGGACTG
GAAAGAGCCGCACGTGGTCCTCTCGGCGCTCGGAAGAAGACTTTACGCGA
CTGGGCTTAGCATTGCGGGGTGTGCTGGGTCCCGACAACGTGCCGGCGCC
GCCCTTACCCTCGTCCTCTCCAGCGGTGCTGGAGGGGTACCTGGGGAGAC
TGCTGCAAGTGCCTGGCGCTGTCAATGCTGTGTACGAGTTTCTTGAAGAA
AAGGAGCCTGTCCTGCAAGGAGAGATAGTGAGCGCCGACTTCCTCCGCAA
CCAGCGCTTTAGAAGCGCCGATCCCGACGCGCAACGCACCATCCCTGGAC
AAACGTCCTCGGCGGCAGAGACAGCAGGGGGACGGCCGCGCACGGCGGGA
GATAAGGCGGGGGCAACTGTCGCCGGGGCGGTGATGGGGATAGTGAGCGC
CGACTTCCTCCGCAACCAGCGCTTTAGAAGCGCCGATCCCGACGCGCAAC
GCACCATCCCTGGACAAACGTCCTCGGCGGCAGAGACAGCAGGGGGACGG
CCGCGCACGGCGGGAGATAAGGCGGGGGCAACTGTCGCCGGGGCGGTGAT
GGGG back to top
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