|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 668 |
| Cds size | 666 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5226.12593.1 >prot_H-paniculata_contig5226.12593.1 ID=prot_H-paniculata_contig5226.12593.1|Name=mRNA_H-paniculata_contig5226.12593.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp
ESRKERKGRRKKLLGRRKGRIAGGVQRAMVHEDSPGFKTTNRSPNRATET
DRLFSRGGRREDEADKSLWGVLTTTTGAFNRELQALAKDLLPTGVRPTCV
PSASGDSLNLTDIRLKTPVDARYVHGQGEGTAVSAGAGLSRDSPDGSEEL
SGKGGRPPPVTSAAGALFTGATPMAPSSTRVANGEPSLAVTFPSFSDRDN
VRSFPLTTESAAASLMRDNNNP back to topmRNA from alignment at H-paniculata_contig5226:6924..12468- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5226.12593.1 ID=mRNA_H-paniculata_contig5226.12593.1|Name=mRNA_H-paniculata_contig5226.12593.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5545bp|location=Sequence derived from alignment at H-paniculata_contig5226:6924..12468- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAAGCAGGAAAGAGAGAAAGGGAAGAAGGAAGAAGCTTCTTGGGAGAAG
GAAGGGTAGAATCGCGGGAGGAGTGCAGCGAGCAATGGTCCATGAAGACT
CCCCGGGTTTTAAGACGACGAACGTGAGTAACCTTTTTGTGTTTTCCATG
CTTTTAATCGGTGAATTCATGGATGCCCGCGAGCTAAAGCTGAGAATGTC
TTGCGTGGGTGCTTGTGTCGTAATATCGAGCGGTGGGAGCAATCGACATA
TAATCTCGTTCCCCCTCGTCCTCCCGAGGAGGCGTCGTCAACGGTGTAAC
AATTCTTGCGGAGAACCATTTGTAAACGAGTCTCAATTTCAGCATTTGTT
TTACACAACATACCACAGTTGCTTTTTCTCGTACACATTGATGAACATAA
TTGTCTTCAAACACAGAAATACTAAGTATGGAGTGATGCTGAGGGTATAA
GCTCTCTCATGGCGCCTTCTTACCTTCTACGAACTTGTGCAGCACGGACT
GCAAGGGCGTGCAAACAATCACTACAAGACGTCTTTTTTCGGAGTTTTGC
ACTTTTTTTCGTGGGGAGTTTTTAGAACCAAAATGTAGAACTGGTTTCTG
TAAGAACTTTGGAATATGGCGCGAATTTTTATCATTTCAAGATTGTGAAA
TTCGCTGCCGTTGACAAGATAAGAACACTCAATGACGGCGTTGTACGCTC
TGGGTGCACAGCGGGGGTTGAATTCAAGGCGAGCGGACAGTTCTGCAGCA
GACGTTGTGGTGTTGTTGTGTCCTCGTGTGTGCTCTTTTGCTTGGTATTT
AGAATTGCTTTGTCCCAGTGTTGATCGTGCACTGTCTGTACAGTACAAGA
CTGTTTTTGCTTGCGGCGAGCTACAGTTGGCGTACTAAACTCAAGTAAAT
ACAGTACAGCACGGTGCCGTGGGTTGCCTCTGGTTGGATCATGGCCGAGT
ATTGTGCTGCGTGTTGTCGCCGCGCTGTTGGTCTACTACGCTGCGCACGG
TGGGCTTCTGTTTGTACAGTAAAATATTGCCGTGACATTGCTTTATTGTA
TCGTGCTACAATTGTGCCGTGTGCTGTAGTATACGTCATTTGTAATACTT
TTTATTAATTGTACTGTAAACCACGGTCAGCCCGAGTGATGCAACTGTCT
GTACCGATCGGCATGCCCTTCTGTACGGCAGTGTGCTTTGTTCCGCTGCC
ATGGTCCGCCTTGCCTTGTGCTGTTATTGCGGCTCTCTACCATTTGGCAA
TATTGCACAAGCTCCTGCTGCTCAATGATCCACCGGACTCAGCTAGATAC
CCTCCCTTACCCCCCGAACGCCTGTTAATATGGAGGTGAGGCATCGACCT
CGAGGCGTCAGAGAGGGTGTAATTCAATCAAAACGTGTCTGAATCTTCTA
ATATTTTTTTGCACAATGTTGGCGTGAACGTTTCAGTTTGTATGAGATAC
ATGCTTTGGGATGAGTCCAAAAAAATGGTGAAGTTATGACCCCCAAAGCG
CACTTTGATGAAAAAAAAATGAGGATCTGACAAACCCCTCAAAATGTACA
TTATTGGTAATATCTCACTATGTTTTTTTCTTTTTTGGATTTGTTTTTTT
CCCATTATCAATTTGCGCCGTCGTTTCGTCTCTGGAACTCTACAGTTCGT
GAGATATACAAAGAAATCATTTAGTATGGTCCTCTGTAGTATGACGTGTA
AAAGACGATTACGCCCCCTCCCCCTTATTGGTCGTGATCTAATTGTGCTG
ACAACTGAACATATCTTGAGTTTGAGGTAAGCCGCATAAACCCAACATAG
GTACGATGAAGTCATTTTATGAGCGTTAGAGATGAAGTTCTACTACCGGT
GGCTGTAAGGTGGGGTTATTTTAGAGTGTTATCCTGCGGTTGGGCGGGGT
GAATTGTTTCAACGAAGGCCGCTTCGCAAAAGCGGTTTAAAAGTAACGCG
AATCAAAATCATGTCAATTGAATGTGGTTGTGTGCATCGAATGCTTTCAG
ATTTTTGTGAAAACCATTCGCGAAGTATTCGTATTTTTCCGCGTGGCGCA
ACGATGCCTCCTCCCCCTCCTTCCCTTCCCCCATGGACCTAGTTTTGTTG
AGCAGTGTATAACAACCGAGATGCTAGGTCAGGTGTATAAGTTCAACATG
AATACGATGCAGTCATCATTAGCGTTGTACTTGTATGAACTTTCGCACGT
GGGTCGAGTTGTGAAGCAGGCTTGCGGTCAGTAAGGAGGGTAGTTCATTT
CTGTCATGTTTTTCGATTAAACGCGATATTTTGTTTCACGTGCAGTACCT
TCCCACCCTCTGTGTTTCCTGTATTTCCCCCCTCTGCGTTAACGCCTCCA
GCGGTCGCCCAACCGCGCGACGGAGACCGATCGCCTCTTTTCTAGGGGGG
GTCGAAGAGAGGATGAGGCAGACAAGAGTCTTTGGGGAGTCCTAACAACT
ACGACTGGCGCGTTTAACAGGGAACTTCAGGCCCTCGCTAAGGTCTGGTG
CTCTGCTGTGTTAATATCCAGTACTGTGTCGCCATGTGTTGACTTGATTG
TCTTGATTTTTTTTTTCGGGTTAGCGTTAGGGGTCAGGTTTGTCTGCTGA
GTTTATTTCGATGTCGATATCGTATTGACATTTGGGTGGCATACCCTGGC
TGAACGAGCACGTATTGTCATGATGCTGCACGAGTGCGGCGTGATATATT
TCGTTGTGCACGAATGGTGGACACGAAGCATATCCCGAGTAGACCCGTTT
CAAGTGAAGAGCTATTGCATTAGTGATGAAAAGGTACTACGAGTTGATTA
TTACCGCGGCTAGTGTAACCCCTGCAGGTCGTGCTCGCCCTCCTCGCTCC
ATGAGCTCGCTGTGCTTGCGGTGGGGGCTCGTGTTTGACCGTTTTTTAGA
TGCAATGATCTCGAGAATAGAGACCTCATGTGCTCCGAAAAAACAGCCGT
CAGTTGACAGATAAATCTACGCAAAAATTTCAAATGTCACATTCTTGGAA
TATTGGTTGGTTGTATAATACAAGACGCGCCCTAGGTGTCGAGATAATCC
ATTATAGCGCTGTGGAGACTGTTTTCCCCCTCGCACAAGTACGAATACTT
GGAAATAGTATTCACAAATAACTGGAAGTATTCGCCTGAGTTGCACAGAG
GGGACAGAAATAATAATTTACCCACGAATGTTCGTTCGATTTTACGAGTA
TTATTAGCAATCGTGAATGGTCTGGGTCACATAGAATACTCGAGCTCATT
CTGAACCTCAGGCGAGTACCTTCAGTTTTTTGTGAAAGCCATTTACAAGT
ATTCGTAATGTCCCGGGGGTAAAAGTGTTCGCGCCCCGGTGATGTCGACA
CCTTGCTTCGAGGGGGTGATGACGCTTTTGATGATTTATCGGCATGTTAT
TTTACACCTGTGGTCTGTCCTCTCGTATGAAAAGTTTTGCGCTTGGTTTT
TTATCCCTCGTCTGCAGGACCTCTTGCCCACCGGTGTACGTCCCACCTGC
GTGCCCTCTGCTTCCGGGGATAGCTTAAACCTGACCGATATAAGACTGAA
GACGCCTGTGGACGCGCGATATGTGCATGGCCAAGGAGAGGGCACGGCGG
TGTCGGCGGGGGCGGGGTTGTCTAGGGATTCGGTGAGGAGCTGTATTCTT
TTGTTCTGGCTGAAAACAACGTTTTGGTGAACTTGTGAGTGAGCGTTAAA
ATGTATTTAGAACAGAGGAAATTCGGGCGTCTCTTCGAGTGCAAAGATGG
AGGATTTGACAAAAAAAAAATATATATATATATAGATATATATCCGCGCG
GGGCTGGCGGCCACAAATGATTTATGTTATGTTAAGAGTGGAAAAACTTT
GATATTTGATGTGGGATTAATAGCGAAAAATAGCCTTCTTCAAGTTCTTC
AACCGATGCCAGTATAACGAAAAAATAAGGGTTTGGGGGTGACAGCAGAG
CTTCAGAGCTATAGTTCAACTGACTTGTCCCCTAATGCTTACCTTTCTAA
TGGTCATAACCTAATTTTCCTGATGAATGTATACGAGTACAGATTGAAGT
CAGCTGCACAATCACAACGTGTGTAGAATGGATGTAATTATAGGAGAATT
CAGAGTTATAATTCAACTAACTGTAGTGGGGTTAGTGACTTGAAGGCCTG
TTTTGACCCCCTCCCCCCCCCCCCCACCCTCTCTCGCTTTTTCTGTTTTT
GTTTTTCGGACTCGAAGCCTGATGGATCTGAGGAATTGAGCGGCAAGGGA
GGCCGCCCGCCTCCTGTGACCAGCGCCGCAGGAGCGTTGTTCACTGGAGC
AACTCCGATGGCCCCGTCTTCAACACGAGTCGCGAATGGCGAGCCTTCTC
TTGCAGTGACGGTACGTGTATCTATCTGTGGTGTGTCATTTTTCGCAGAA
TAAGTCGAACAGTTTCAGCATACATAATTATGTGCCAATTTTACAGAAAT
GTGTGTAAAAAAAGGGTGGGGAAATATTTATTTATGTATGTAATCAATTT
TCGAGTGTTTTTTGCCCAATAGATTATCGAGTAGGTCGTTGAATTTCTTT
TTTTTCCGGTAGATCAAGCTGGTATTTTTTCCCATTACGTGTTCTCTGAA
TATGTAGGGTTTTTTTTTTTGTGAAGACGTTCCACTTTTCCGGAACAAGA
TTTTGAAGGGATATTTACAAGAGTGACTATAGCCTCGCACTTTCCCAGAT
ATATGCCATCACATCACCAGTGCTGTTGCTGTCATGTGGGTTCAGGGCCT
CTCTGTATTGTGGAGATCGATGAGTCGATATCCACAGGGAAGTGATTCTA
GTTGTACCATCTGTGTGTTATTATTTTTTTCATACCTCGGATGAAGGTTG
CCATTTTCCAATGAAATGGCCTTCACACAGCAATTCCATTTTTCTGGTAT
ATACGTATCACATCCACACCTGTAGGTCCGTGCTAGAAATGGTATCGTGA
CGTCTAGCTGGTTCCCTCTTGTCATACTCTTTACCTTGACTTTTCCAACT
TGTCCTTCACTCACCATTCCAAGGCGAACATTTTAAAACGAAGGTGTAGC
CAAATTCAATTACTGTATCACATCAATACAGTCTATATAGTGTGTTGGAG
TGTTGACAAGGTTCCGAAAGCACGTGTTGGATCGCAATATCCTTAATCTT
TAGCCAACCTTTATGCCCGAAGATGGAGAAAACCTGAGGATATTCGCTCG
TATTCTCGGATCGAATGATCCACGAAGGTGTATTGTATTCATCTACAGTT
CCCCTGGTATTGAACCGCATGTCCATGTTTGCGGAACTCCAGTTTAGTGA
TGTTATCCCGCATGTGCCTTTTCTATCCCAATATAGTTCCTGGAATGAAC
CCGTACAGCTTTTGCACTCAAGTACATTTCCTTAATTCCTCCCCATACCC
CCGCACTGACAACTTCCCATTGTCCATCGTAATTTCTCCAACAAACTATC
AGTTCCCGTCGTTCTCTGACCGCGACAACGTGAGGTCTTTCCCCTTGACC
ACCGAGTCGGCAGCAGCGTCGCTCATGCGGGACAATAACAACCCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5226:6924..12468- >mRNA_H-paniculata_contig5226.12593.1 ID=mRNA_H-paniculata_contig5226.12593.1|Name=mRNA_H-paniculata_contig5226.12593.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at H-paniculata_contig5226:6924..12468- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAAGCAGGAAAGAGAGAAAGGGAAGAAGGAAGAAGCTTCTTGGGAGAAG
GAAGGGTAGAATCGCGGGAGGAGTGCAGCGAGCAATGGTCCATGAAGACT
CCCCGGGTTTTAAGACGACGAACGAAAGCAGGAAAGAGAGAAAGGGAAGA
AGGAAGAAGCTTCTTGGGAGAAGGAAGGGTAGAATCGCGGGAGGAGTGCA
GCGAGCAATGGTCCATGAAGACTCCCCGGGTTTTAAGACGACGAACCGGT
CGCCCAACCGCGCGACGGAGACCGATCGCCTCTTTTCTAGGGGGGGTCGA
AGAGAGGATGAGGCAGACAAGAGTCTTTGGGGAGTCCTAACAACTACGAC
TGGCGCGTTTAACAGGGAACTTCAGGCCCTCGCTAAGCGGTCGCCCAACC
GCGCGACGGAGACCGATCGCCTCTTTTCTAGGGGGGGTCGAAGAGAGGAT
GAGGCAGACAAGAGTCTTTGGGGAGTCCTAACAACTACGACTGGCGCGTT
TAACAGGGAACTTCAGGCCCTCGCTAAGGACCTCTTGCCCACCGGTGTAC
GTCCCACCTGCGTGCCCTCTGCTTCCGGGGATAGCTTAAACCTGACCGAT
ATAAGACTGAAGACGCCTGTGGACGCGCGATATGTGCATGGCCAAGGAGA
GGGCACGGCGGTGTCGGCGGGGGCGGGGTTGTCTAGGGATTCGGACCTCT
TGCCCACCGGTGTACGTCCCACCTGCGTGCCCTCTGCTTCCGGGGATAGC
TTAAACCTGACCGATATAAGACTGAAGACGCCTGTGGACGCGCGATATGT
GCATGGCCAAGGAGAGGGCACGGCGGTGTCGGCGGGGGCGGGGTTGTCTA
GGGATTCGCCTGATGGATCTGAGGAATTGAGCGGCAAGGGAGGCCGCCCG
CCTCCTGTGACCAGCGCCGCAGGAGCGTTGTTCACTGGAGCAACTCCGAT
GGCCCCGTCTTCAACACGAGTCGCGAATGGCGAGCCTTCTCTTGCAGTGA
CGCCTGATGGATCTGAGGAATTGAGCGGCAAGGGAGGCCGCCCGCCTCCT
GTGACCAGCGCCGCAGGAGCGTTGTTCACTGGAGCAACTCCGATGGCCCC
GTCTTCAACACGAGTCGCGAATGGCGAGCCTTCTCTTGCAGTGACGTTCC
CGTCGTTCTCTGACCGCGACAACGTGAGGTCTTTCCCCTTGACCACCGAG
TCGGCAGCAGCGTCGCTCATGCGGGACAATAACAACCCGTTCCCGTCGTT
CTCTGACCGCGACAACGTGAGGTCTTTCCCCTTGACCACCGAGTCGGCAG
CAGCGTCGCTCATGCGGGACAATAACAACCCG back to top
|