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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 1362 |
| Cds size | 1293 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5172.12504.1 >prot_H-paniculata_contig5172.12504.1 ID=prot_H-paniculata_contig5172.12504.1|Name=mRNA_H-paniculata_contig5172.12504.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=431bp
MSLEAAAKELEKLEIRMQKNVDNKSYNGAEDEKSSNWWEGKDDGREALSQ
QHCQHDRKTAQGGPGGDNLRRQPQYQHLGAGGTGSTDTGGGTGMSRSDFE
LSFSGPGPGRRRQQQDEGSGRQTISGAGCATREGSPTRVPSSFFSSLSSF
HPLQNQGSVEIEHGGGGAGGGGSGASGGGGGIYLNPISRPASTGLPSHGN
DQHGVGATAAADGDHIPPRMNRFDHDSTNTSRDAAIAAGDGQNWSRGSSW
RMSGLGGSSGGRSLRNTWGSSAVGGAGPAAGSVVAAAVRDGARLREWRTE
ADADLSDIKATMQRIDGGTSISASAFTGGPAYSAAGGNGGGMFGLEPTTG
SYTSSSAAAAASDIVRSAVDTTTTTDFRDGIRSSNPTISGFRDRIRSSAP
VAATGLSGGDVSSANGLYSSAGGDSARAMGW back to topmRNA from alignment at H-paniculata_contig5172:3801..8795+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5172.12504.1 ID=mRNA_H-paniculata_contig5172.12504.1|Name=mRNA_H-paniculata_contig5172.12504.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4995bp|location=Sequence derived from alignment at H-paniculata_contig5172:3801..8795+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGAGACCATGCCCTAATGCTGCAACGAGGAGGGCTACGGGAGCAATAGGA
CAAAACGAAATGCAAGGATGTCATTAGAGGCAGCCGCGAAAGAACTGGAG
AAGCTGGAGATACGGATGCAAAAAAACGTCGACAACAAAAGCTATGTGAG
AGGGTCAACTAGTGCAAGCATAGCCCCCCCAGGAGATTGATCTGTGTCGG
ATGTTTGCAAAATACGTCAAATCAAACCTAACGGCTACTTGTCGAAGGCC
CTCAGGATCCTTGCACCATCTGCGCTGCTTGACTTCTGTGGGGCTAGTTG
TGCGGGGTATCAATAAACCATAATGTTCTCGGGAGTCGTGGTTCAATTGC
AGTTCACTCCGCTCGCTGCAGCTAAGAGTTCCGCACTTTGAAAAAATGTG
ACTCTGGGCTTGCAGGATGTTCAAACAGAGAACTGTACTGTCCGTACTGC
AAAATACATTCTGAAAGTGTAGCTCCAACTGCCAGAGTATCGTCAGTAGT
GTTGTCGCGTAGCCTGAACGGTAGTGTATATAGTAGCACAGTACAACAGT
ACCGTACAATCCGTACTGACGGTCAGCATTTTTTAGGGTTGTGGCCACGT
AAGGTGTACTCGGGAGTTTTAAGGCAACACGCAGGGTCGTTGCTGCTTTG
CTCGCGTGGGCTCTGTCAACGTCATTAGGGCCCTCACACAGACATAGGCG
CTCTGCTAAGGCAGCTGAATTTAGGTCAAACGTACGCTCTGCCAGTCCAC
AATACACAGGATCGACCGCGTGAGGTTAGGGATAAGGTTAGTGTTAGAAT
TGGTGGGTTTCGGGGTGCTGCACACACCCTCTGCTAGCGCAATTAGATTA
CATGTCAGATCTAAGCTCTGCCAACGAACACACACACGCCGCAGTATGAC
AGTTTGATAGTGGACATTTTTGGTTCTCTCGATGGGACGATAAGTAGAAC
CTCCTCTGCAGCAGTTATTCAAATCGTCCGTTTCAAAACGCCGGGAAAAA
GTCCCGGGTTGACCTGAAAAAGATATGGCACCCAAATAAGTGACAGCCCC
AGGCAAAATAGTGGGAAGCCAAACGTTTTCGAAAAAGGAAAGGCTCAACA
CTGGTGCATTGATGGTGCAGTCCCCATCCCCGTCGCTCACTTCCCTTCAG
AAGCTTGAAGCTTTAGCCACTTGTGTGTTGGCGGTCCTCTACTTCGTCAT
TACGTGATCGTTGTATTTCTGCATTTACTGCGTGGTGTTTCCACAGTACG
AGTATAATGCGGTGCAGAGGAATAGGCCAAGTGCGTAAATTATGAGCTGT
AACAGCAACCCTTGCCACGCTCGTAGAAATTTCCGATGGCTAAATGTCTT
GTTAAGAAAGAGACAAGTATGTCTATGTAGTCAATGCTCCGTAGCATGGA
GTGTGTTAAGCTTTACGCAGCAGTAGCAAAACAGTGTATTTGAAATAGAG
TCTTAGGATGACCTGTCCGTCGATGATCACTAGTGTAGCACTGTATACAT
GATTGCCTAGCATAGAAAGTAAGTGTTGTCGCGACTTAGTATACGAGGAT
GGATAGGAATTACATACTCTAACGAGTAATGACAGCATAGCGGTGCAATT
CGCGACGTTTCATAGTAATTTTTCTACCACAAATTGGGAAATCTAGAAGA
CGTTGATCTGACAGTTCTTCGAGAAGTTCCTGTAAATCACGGGACAGTAG
AAACGATGCGCTTGTGCGCGGAGAATGCGTGTACGTAGCTTAGGAGAGAG
CGGACTCACCATGGGGTGCGCCCCACCATTTCTCATTCCTTGTAAGATAT
CGTTTTTCTTCTCTAGCCCACTAGCGGCACTTTTCAACCATCATGAACTG
TTTGTATCCTCGGCACAGCGTGCCTGCTCTGTCAGCTTAACAGCTACCAG
CGCCAGCCTTTGCAGCTGCATGCGGGTGTATCATCAGATATTCTCAGTAG
TTGAATAACCGCAGCAGGATACAGTGGTAAGAACATAACGTTGACTGCGG
CAACGGCTTTCCCACCAGGGATCTGGAATCTCGGCGCTTTTCTCAGTTTC
GAATAAGTGTATACACTAGTTTACCGGGTGTAAACGCCTCCCTATCGACT
ACCATCCGCAATGATTCCAACCCTTGGTAGGGCCATTTCACTCTCTTATC
ACTTACCTCCGACCCAGCCAGGCAACACGGGCATATAGCAACAATGCTTG
CGCAAATGCTGTTAGCATCCTTCCTGTTAGCATCCTTCCTGTTAATACTC
TCCCCTCCCTACTGCCTGCATGGGCTTCGTGGTAGCATGTCGCATAGCTT
GCAATCACCCGCCCATATTGACCCCACCCCCCTACTGCCTGCCCAGGTGG
GATAATAGCGTGATCACCAGGGGAGAAGTCGAATACCATCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCATGAATATCACCGGAGGCTGATATTGT
TTTGGCGGAAAATGTAAAAACTAGGGGGGGCTCACATCCTGTAAAAAGGT
GATCGTGTAGACTTGATTAATTCTGGGATCAGCTATTGACACTGTTTGAC
CGTGGTTTCACGGGTTTCGCCACGTCTTCTGATCACTGCCTGTGCTGTTC
TGCACATGTATGTATGTACAAAACCGTCAAGCAGAACGGAGCAGAGGATG
AAAAGTCCAGCAATTGGTGGGAAGGCAAGGATGACGGTCGAGAAGCGTTA
TCCCAGCAACACTGTCAGCACGACCGAAAAACTGCTCAAGGCGGACCGGG
GGGTGACAATCTGCGTCGCCAGCCCCAGTATCAGCATCTTGGAGCGGGAG
GAACCGGTTCAACGGACACAGGCGGCGGAACCGGGATGAGCAGGTCTGAC
TTTGAGCTCTCCTTTTCTGGGCCTGGCCCTGGTCGCCGAAGGCAGCAGCA
GGATGAAGGTTCGGGACGGCAGACGATCAGTGGGGCGGGGTGTGCCACGC
GGGAAGGGTCCCCTACTCGAGTGCACTTAAGACGGACAGGTGACAATCTT
GTGACTTTTTTGTGTGTATGGTATGTAGCGTATGTAACACGACCTATAAA
GTATAGCGTGTAGAAGGATGTGGAGTCTGCTGCTGTGGTTTGTACAGTAT
ACGTAAGAGATGCAACGAATGAAGTATAAGCTTCTAGCAGATTAAGAATC
GCAGTTCTTGGAGAGTTGAAGACGAAATATATTGATGCGTTTTGTGTGGT
GCTGTTTCAGCTAACGTTTTGGGAGGTGACACAGTCCAACCCCAGGGGGG
GGGGGAAAGATGAGCAAGAGCGATATCATTCGGTCCTCCTAGGCGCAGGC
TGGGAAACGATTCTCCCTGTCCTGCATTATGTCCAATGCGCAAATCTCCC
TTGCTCCTTACATCAAAATACGTGCTGCTGTACGTTGTTTTCATGTCTAA
AATTCGATCTCATTTTTTCAAGAACACTAAGTTATTTCTCCCCTTTCTTG
TCACCTCTCTTTCGCGATCGCGATGGCGTTGCAGAAGAAAAGTACAGTTA
AACGTTATCTTGGTACGCCCTGCGTGCACATCATCATATATCGCCTCCTC
CCTCTCTCTCCTCCTCTTTTTTCTCTTCTCTTTCTTCCTTCCACCCGTTA
CAAAACCAAGGGAGTGTCGAGATCGAACACGGAGGAGGCGGGGCAGGTGG
CGGTGGCAGTGGCGCTAGCGGCGGCGGCGGCGGCATTTACCTCAATCCGA
TATCACGCCCTGCAAGCACCGGTCTTCCAAGCCACGGCAACGACCAACAC
GGAGTTGGCGCCACCGCCGCTGCCGACGGTGATCACATCCCCCCGCGTAT
GAATCGCTTCGACCACGACAGCACCAACACTAGCAGAGATGCAGCGATCG
CAGCAGGTGACGGGCAAAATTGGAGTCGAGGATCTAGCTGGAGAATGTCA
GGGTTGGGTGGCAGCAGCGGCGGTAGATCACTGAGGAACACGTGGGGTAG
CTCTGCTGTCGGCGGAGCAGGGCCAGCTGCCGGGTCCGTGGTGGCGGCGG
CGGTGCGGGATGGAGCTAGGCTAAGAGAGTGGCGAACAGAAGCAGATGCC
GACCTGTCCGATATCAAGGCCACGATGCAGCGGATTGATGGTGGGGATGA
GAAAGAGTGGTCACCGCTGAGACATGCTCTTCTGTTTTTGTGCCATTTTT
TTGGTGGCGACTTTATGGGAGAAGGGACGGGGGCGGGATCTTGAACACAA
AGCTCGGTAAATAGTTGTTACACTTTTTGCAATGTTCTCGAGTATTATAC
TTTTTGCAATATTTTTGCGGTTAGGGTAGCACCGATCAGCATAGTCCGCA
GTTCGTACCGCTTACTTTGCACCGATATATCGTAATATTGGTACCAGTAG
ACTGTTTTGTCCCCCCCCCCCCCCTCTGATCTGTACCCTGCCGATCGTGA
GCAACACCATTGTCCACGGCTAACGCTTACGACCCGACTCGTACCCATAG
TGATCGGTCTAATGTGGGAATACTTTATAGGTGTACGTACAAACTAGGTA
GGCTAATTGTTTCTGTGTCTGCACGCACTGTCTTGACCTGTAGTATTTCG
AGTAGGTCGAAGTACATATACAAGATAGAGTTCCACATTTAGAATGTAAT
GGTCTTGATAACCCACCTGGTCAGTACCTGCCTATAACATCGTTTCGGCA
GGTGGTACCTCCATCTCTGCAAGCGCGTTCACGGGCGGGCCGGCCTACAG
TGCCGCCGGCGGCAATGGCGGTGGCATGTTCGGCTTGGAACCCACTACTG
GCTCGTATACGTCATCCTCCGCGGCCGCCGCCGCTTCTGATATCGTCCGG
TCAGCAGTAGATACTACGACCACAACGGATTTTCGAGACGGGATCCGCTC
GAGTAACCCGACAATTTCCGGATTCCGAGATAGAATCCGTAGCAGTGCTC
CGGTGGCGGCGACGGGTCTCTCTGGCGGTGATGTTTCGAGCGCCAACGGT
TTATACTCGTCAGCCGGGGGAGACTCGGCGAGGGCTATGGGGTGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5172:3801..8795+ >mRNA_H-paniculata_contig5172.12504.1 ID=mRNA_H-paniculata_contig5172.12504.1|Name=mRNA_H-paniculata_contig5172.12504.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2586bp|location=Sequence derived from alignment at H-paniculata_contig5172:3801..8795+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCATTAGAGGCAGCCGCGAAAGAACTGGAGAAGCTGGAGATACGGAT
GCAAAAAAACGTCGACAACAAAAGCTATATGTCATTAGAGGCAGCCGCGA
AAGAACTGGAGAAGCTGGAGATACGGATGCAAAAAAACGTCGACAACAAA
AGCTATAACGGAGCAGAGGATGAAAAGTCCAGCAATTGGTGGGAAGGCAA
GGATGACGGTCGAGAAGCGTTATCCCAGCAACACTGTCAGCACGACCGAA
AAACTGCTCAAGGCGGACCGGGGGGTGACAATCTGCGTCGCCAGCCCCAG
TATCAGCATCTTGGAGCGGGAGGAACCGGTTCAACGGACACAGGCGGCGG
AACCGGGATGAGCAGGTCTGACTTTGAGCTCTCCTTTTCTGGGCCTGGCC
CTGGTCGCCGAAGGCAGCAGCAGGATGAAGGTTCGGGACGGCAGACGATC
AGTGGGGCGGGGTGTGCCACGCGGGAAGGGTCCCCTACTCGAGTGCAACG
GAGCAGAGGATGAAAAGTCCAGCAATTGGTGGGAAGGCAAGGATGACGGT
CGAGAAGCGTTATCCCAGCAACACTGTCAGCACGACCGAAAAACTGCTCA
AGGCGGACCGGGGGGTGACAATCTGCGTCGCCAGCCCCAGTATCAGCATC
TTGGAGCGGGAGGAACCGGTTCAACGGACACAGGCGGCGGAACCGGGATG
AGCAGGTCTGACTTTGAGCTCTCCTTTTCTGGGCCTGGCCCTGGTCGCCG
AAGGCAGCAGCAGGATGAAGGTTCGGGACGGCAGACGATCAGTGGGGCGG
GGTGTGCCACGCGGGAAGGGTCCCCTACTCGAGTGCCCTCCTCTTTTTTC
TCTTCTCTTTCTTCCTTCCACCCGTTACAAAACCAAGGGAGTGTCGAGAT
CGAACACGGAGGAGGCGGGGCAGGTGGCGGTGGCAGTGGCGCTAGCGGCG
GCGGCGGCGGCATTTACCTCAATCCGATATCACGCCCTGCAAGCACCGGT
CTTCCAAGCCACGGCAACGACCAACACGGAGTTGGCGCCACCGCCGCTGC
CGACGGTGATCACATCCCCCCGCGTATGAATCGCTTCGACCACGACAGCA
CCAACACTAGCAGAGATGCAGCGATCGCAGCAGGTGACGGGCAAAATTGG
AGTCGAGGATCTAGCTGGAGAATGTCAGGGTTGGGTGGCAGCAGCGGCGG
TAGATCACTGAGGAACACGTGGGGTAGCTCTGCTGTCGGCGGAGCAGGGC
CAGCTGCCGGGTCCGTGGTGGCGGCGGCGGTGCGGGATGGAGCTAGGCTA
AGAGAGTGGCGAACAGAAGCAGATGCCGACCTGTCCGATATCAAGGCCAC
GATGCAGCGGATTGATGCCTCCTCTTTTTTCTCTTCTCTTTCTTCCTTCC
ACCCGTTACAAAACCAAGGGAGTGTCGAGATCGAACACGGAGGAGGCGGG
GCAGGTGGCGGTGGCAGTGGCGCTAGCGGCGGCGGCGGCGGCATTTACCT
CAATCCGATATCACGCCCTGCAAGCACCGGTCTTCCAAGCCACGGCAACG
ACCAACACGGAGTTGGCGCCACCGCCGCTGCCGACGGTGATCACATCCCC
CCGCGTATGAATCGCTTCGACCACGACAGCACCAACACTAGCAGAGATGC
AGCGATCGCAGCAGGTGACGGGCAAAATTGGAGTCGAGGATCTAGCTGGA
GAATGTCAGGGTTGGGTGGCAGCAGCGGCGGTAGATCACTGAGGAACACG
TGGGGTAGCTCTGCTGTCGGCGGAGCAGGGCCAGCTGCCGGGTCCGTGGT
GGCGGCGGCGGTGCGGGATGGAGCTAGGCTAAGAGAGTGGCGAACAGAAG
CAGATGCCGACCTGTCCGATATCAAGGCCACGATGCAGCGGATTGATGGT
GGTACCTCCATCTCTGCAAGCGCGTTCACGGGCGGGCCGGCCTACAGTGC
CGCCGGCGGCAATGGCGGTGGCATGTTCGGCTTGGAACCCACTACTGGCT
CGTATACGTCATCCTCCGCGGCCGCCGCCGCTTCTGATATCGTCCGGTCA
GCAGTAGATACTACGACCACAACGGATTTTCGAGACGGGATCCGCTCGAG
TAACCCGACAATTTCCGGATTCCGAGATAGAATCCGTAGCAGTGCTCCGG
TGGCGGCGACGGGTCTCTCTGGCGGTGATGTTTCGAGCGCCAACGGTTTA
TACTCGTCAGCCGGGGGAGACTCGGCGAGGGCTATGGGGTGGGTGGTACC
TCCATCTCTGCAAGCGCGTTCACGGGCGGGCCGGCCTACAGTGCCGCCGG
CGGCAATGGCGGTGGCATGTTCGGCTTGGAACCCACTACTGGCTCGTATA
CGTCATCCTCCGCGGCCGCCGCCGCTTCTGATATCGTCCGGTCAGCAGTA
GATACTACGACCACAACGGATTTTCGAGACGGGATCCGCTCGAGTAACCC
GACAATTTCCGGATTCCGAGATAGAATCCGTAGCAGTGCTCCGGTGGCGG
CGACGGGTCTCTCTGGCGGTGATGTTTCGAGCGCCAACGGTTTATACTCG
TCAGCCGGGGGAGACTCGGCGAGGGCTATGGGGTGG back to top
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