mRNA_H-paniculata_contig51650.12495.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig51650.12495.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI) HSP 1 Score: 71.2 bits (173), Expect = 9.320e-13 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 13 PVCFSDIKKLAHKTLWTEAVKAEFEGLENLKAWTYVDSVRDGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFSQ 240
PV + + K W EA+ E + +E WT V ++ G +SA+W+F K+DE+GNV + KARLVARG+SQ
Sbjct: 174 PVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQ 249
BLAST of mRNA_H-paniculata_contig51650.12495.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI) HSP 1 Score: 71.2 bits (173), Expect = 1.220e-12 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 13 PVCFSDIKKLAHKTLWTEAVKAEFEGLENLKAWTYVDSVRDGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFSQ 240
PV + + K W EA+ E + +E WT V ++ G +SA+W+F K+DE+GNV + KARLVARG+SQ
Sbjct: 549 PVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQ 624
BLAST of mRNA_H-paniculata_contig51650.12495.1 vs. uniprot
Match: A0A5C3EBA0_9BASI (Related to Retrotransposon protein n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3EBA0_9BASI) HSP 1 Score: 66.6 bits (161), Expect = 5.270e-11 Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 1 TEEPPVCFSDIKKLAHKTLWTEAVKAEFEGLENLKAWTYVDSVRDGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFSQ 240
++E P + + + W EA+K E + L+N WT VD + ++A+WVF K D GNV+K KARLVARGF+Q
Sbjct: 859 SQEDPQMLAQARASPNWPKWEEAIKVELDSLDNTGTWTIVD-LPAARKAITAKWVFKTKQDADGNVSKYKARLVARGFTQ 937
BLAST of mRNA_H-paniculata_contig51650.12495.1 vs. uniprot
Match: A0A2S2NPY8_SCHGA (Copia protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NPY8_SCHGA) HSP 1 Score: 65.9 bits (159), Expect = 9.540e-11 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 13 PVCFSDIKKLAHKTLWTEAVKAEFEGLENLKAWTYVDSVRDGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFSQ 240
P + + + +K W A+K+E E L K WT V ++ N++S +W+F K D +G +TK KARLVARGFSQ
Sbjct: 63 PTTYDEAQSHPNKKEWNLAMKSEIESLYKNKTWTLVKKPQN-RNIISTKWIFKIKKDGEGQITKYKARLVARGFSQ 137
BLAST of mRNA_H-paniculata_contig51650.12495.1 vs. uniprot
Match: UPI001E2759C6 (uncharacterized protein LOC123684598 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2759C6) HSP 1 Score: 65.9 bits (159), Expect = 9.670e-11 Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 4 EEPPVCFSDIKKLAHKTLWTEAVKAEFEGLENLKAWTYVDSVRDGSNVVSARWVFAWKIDEQGNVTKPKARLVARGF 234
E+ PV + + +K WTEAV++ + LE W V+ + + V+ ++WVF K DE GN++K KARLVARGF
Sbjct: 12 EDDPVSYDEAMSSENKAKWTEAVESAIKALEENDTWI-VEKNPNNAEVIDSKWVFKGKKDEAGNISKFKARLVARGF 87
BLAST of mRNA_H-paniculata_contig51650.12495.1 vs. uniprot
Match: A0A2P6P7L4_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6P7L4_ROSCH) HSP 1 Score: 63.2 bits (152), Expect = 8.500e-10 Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 25 SDIKKLAHKTLWTEAVKAEFEGLENLKAWTYVDSVRDGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFSQ 240
S KK +W +A++ EF+ L N W+ V D NVVS +W+F K + G++++ KARLVARGFSQ
Sbjct: 29 SSYKKAMEIPVWKQAMQEEFDALTNQGTWSLVPPQAD-KNVVSCKWIFKVKKNSDGSISRQKARLVARGFSQ 99
BLAST of mRNA_H-paniculata_contig51650.12495.1 vs. uniprot
Match: A0A2G8SUK6_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SUK6_9APHY) HSP 1 Score: 63.2 bits (152), Expect = 8.770e-10 Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 13 PVCFSDIKKLAHKTLWTEAVKAEFEGLENLKAWTYVDSVRDGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFSQ 240
P ++ K+ W EA+K E E L W ++ G+N+VS RWVF K D GN+++ +ARLVARGFSQ
Sbjct: 1001 PASLAEAKRRPEWPRWEEAMKEEMEALSKHGTWR-LEHPPPGTNIVSCRWVFHAKKDASGNISRYRARLVARGFSQ 1075
BLAST of mRNA_H-paniculata_contig51650.12495.1 vs. uniprot
Match: A0A182GGE6_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GGE6_AEDAL) HSP 1 Score: 62.8 bits (151), Expect = 1.190e-9 Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 1
Query: 4 EEPPVCFSDIKKLAHKTLWTEAVKAEFEGLENLKAWTYVDSVRDGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFSQ 240
E+ P SD++ + LW +A+K E + LE WT + + G + +S +W+F K E G T+ KARLVARGFSQ
Sbjct: 650 EDLPESLSDLQIRDDRNLWQQAMKEEMDSLERNGTWT-LTKLPAGRSAISCKWIFKIKPGEDGQPTRYKARLVARGFSQ 727
BLAST of mRNA_H-paniculata_contig51650.12495.1 vs. uniprot
Match: A0A2G8SLM4_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SLM4_9APHY) HSP 1 Score: 62.8 bits (151), Expect = 1.190e-9 Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 13 PVCFSDIKKLAHKTLWTEAVKAEFEGLENLKAWTYVDSVRDGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFSQ 240
P ++ K+ W EA+K E E L W V+ G+N+VS RWVF K D GN+++ +ARLVARGFSQ
Sbjct: 998 PASLAEAKRRPEWPRWEEAMKEEMEALAKHGTWR-VERPPLGTNIVSCRWVFHAKKDASGNISRYRARLVARGFSQ 1072
BLAST of mRNA_H-paniculata_contig51650.12495.1 vs. uniprot
Match: A0A2G8S3F3_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8S3F3_9APHY) HSP 1 Score: 62.8 bits (151), Expect = 1.200e-9 Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 13 PVCFSDIKKLAHKTLWTEAVKAEFEGLENLKAWTYVDSVRDGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFSQ 240
P ++ K+ W EA+K E E L W V+ G+N+VS RWVF K D GN+++ +ARLVARGFSQ
Sbjct: 1014 PASLAEAKRRPEWPRWEEAMKEEMEALAKHGTWR-VERPPLGTNIVSCRWVFHAKKDASGNISRYRARLVARGFSQ 1088 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51650.12495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig51650.12495.1 >prot_H-paniculata_contig51650.12495.1 ID=prot_H-paniculata_contig51650.12495.1|Name=mRNA_H-paniculata_contig51650.12495.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp TEEPPVCFSDIKKLAHKTLWTEAVKAEFEGLENLKAWTYVDSVRDGSNVVback to top mRNA from alignment at H-paniculata_contig51650:1010..1249+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig51650.12495.1 ID=mRNA_H-paniculata_contig51650.12495.1|Name=mRNA_H-paniculata_contig51650.12495.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=240bp|location=Sequence derived from alignment at H-paniculata_contig51650:1010..1249+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig51650:1010..1249+ >mRNA_H-paniculata_contig51650.12495.1 ID=mRNA_H-paniculata_contig51650.12495.1|Name=mRNA_H-paniculata_contig51650.12495.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=480bp|location=Sequence derived from alignment at H-paniculata_contig51650:1010..1249+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |