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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1435 |
| Cds size | 1137 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig515.12469.1 >prot_H-paniculata_contig515.12469.1 ID=prot_H-paniculata_contig515.12469.1|Name=mRNA_H-paniculata_contig515.12469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=379bp
MSGHVSLVRNDTMCEHESSVVAGRPSSCQFSGKPIPKIEIPPCAESGNRP
GSLSEAPLRDHIMVFGDSCSPSWRISATLEGKKHSDASGGATSGVGGRLG
INPARLPKRAVAVLPTKFGSYLCRSGSTAVEAEATGGDVAVGDKPPILTT
RGGNLKEATSTEVETSVESMAVHAVVLLESKPTDPSGSGVENTTPTEGSA
TVESRATNGATPRRQESTKCASKNGGSRDRGTSTKDVLTSVCAATLRSVQ
PTAFGDGIVVTDDCTLDTQQQTEGRHEGNREKVKGTIATPDAICRLGFQH
FWMNNRESLLSTVEPVARNKLANEHRDGDGYNNSHESSNGTEKIVLQENP
LVPRRPSSTPLHRNAPGRRRTSVVFSVK* back to topmRNA from alignment at H-paniculata_contig515:14493..16115- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig515.12469.1 ID=mRNA_H-paniculata_contig515.12469.1|Name=mRNA_H-paniculata_contig515.12469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1623bp|location=Sequence derived from alignment at H-paniculata_contig515:14493..16115- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCCATCCCTACCCACCGCGCTACAGTCGGAAGGTCCATCGAGGTAGGCC
AATGCCAATATTGTTGTTTGAAGGTTTGAAGGGTAAATTCACGCTGGTGT
AATCCGACGATACCAGCAGGAGTTGAGGACGGGGGTGGTGCACGTAGCGT
CAAAAGTACCCGCATATAGTTTAGGTCTGTATCTGATACCTTCCATACCC
CCTCCTGCTCTCGCGTACCCTCTCTTCAAAGGGCGATCAAGATAACAATG
GCGACGACAACGTCACCAATAAGACCATTCTCGATTCGGTGCACAATGCG
TTGCATACGAAAGTCGGTGACGGTGATACTTGTGTCGACAATACCGTGCT
GCCAGATCAGCATAGCAGCATATCTCGAACTCGCCATAAACGTGATCGAG
AAAGAGTAAACTTGATGAGTGGGCATGTTTCTCTAGTAAGAAATGATACA
ATGTGCGAGCACGAGTCTTCCGTTGTTGCAGGCCGACCTTCGTCTTGTCA
GTTTTCGGGTAAGCCTATTCCAAAGATCGAAATACCACCTTGTGCTGAAA
GCGGCAATCGCCCTGGATCACTGAGCGAAGCTCCTCTGCGGGATCACATC
ATGGTATTCGGTGACTCTTGTTCACCTAGTTGGAGGATTTCTGCTACGCT
CGAAGGTAAAAAGCATAGCGATGCAAGCGGGGGGGCTACCAGTGGTGTTG
GCGGGAGATTGGGCATAAACCCCGCACGACTACCCAAAAGAGCCGTGGCA
GTATTGCCCACGAAGTTTGGTTCGTACTTGTGCCGTTCGGGTTCAACCGC
CGTCGAGGCAGAAGCAACAGGCGGGGACGTAGCCGTTGGAGATAAGCCAC
CGATTCTTACAACGCGAGGTGGAAACTTGAAAGAGGCGACGTCAACGGAG
GTCGAAACCTCCGTTGAGTCGATGGCAGTACATGCTGTCGTACTCTTGGA
GTCGAAGCCGACTGATCCTTCCGGCAGTGGTGTTGAAAATACGACACCGA
CAGAAGGATCGGCGACGGTTGAATCGAGGGCGACAAATGGGGCTACGCCC
AGGAGACAAGAGTCAACAAAATGTGCTTCCAAAAATGGTGGTTCAAGGGA
CAGAGGGACGTCTACGAAGGACGTGCTAACCTCGGTGTGCGCCGCGACTC
TCCGTTCCGTACAACCAACTGCTTTTGGCGACGGCATAGTAGTCACCGAT
GATTGTACTTTGGATACGCAGCAGCAGACAGAGGGGCGACACGAAGGGAA
CAGGGAGAAGGTAAAGGGTACGATCGCTACGCCAGACGCTATTTGTAGAT
TGGGCTTCCAACACTTCTGGATGAACAACAGAGAGTCGTTGTTGTCAACG
GTAGAGCCCGTCGCTAGAAACAAGTTGGCCAACGAGCATCGCGATGGTGA
TGGGTACAACAACAGCCACGAATCCTCTAATGGCACAGAGAAAATTGTCC
TCCAAGAAAATCCTCTCGTACCTCGACGGCCGTCGTCTACACCGCTACAC
CGAAACGCTCCGGGGAGGCGACGAACGAGTGTTGTATTCAGCGTCAAGTG
AAACAGATCGACGCCGCGCAGGCCCAGCTTTTTCAGGAATCTTCATGGGA
CCCGGTTACCAAGACAAACCGAT back to topCoding sequence (CDS) from alignment at H-paniculata_contig515:14493..16115- >mRNA_H-paniculata_contig515.12469.1 ID=mRNA_H-paniculata_contig515.12469.1|Name=mRNA_H-paniculata_contig515.12469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2274bp|location=Sequence derived from alignment at H-paniculata_contig515:14493..16115- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTGGGCATGTTTCTCTAGTAAGAAATGATACAATGTGCGAGCACGA
GTCTTCCGTTGTTGCAGGCCGACCTTCGTCTTGTCAGTTTTCGGGTAAGC
CTATTCCAAAGATCGAAATACCACCTTGTGCTGAAAGCGGCAATCGCCCT
GGATCACTGAGCGAAGCTCCTCTGCGGGATCACATCATGGTATTCGGTGA
CTCTTGTTCACCTAGTTGGAGGATTTCTGCTACGCTCGAAGGTAAAAAGC
ATAGCGATGCAAGCGGGGGGGCTACCAGTGGTGTTGGCGGGAGATTGGGC
ATAAACCCCGCACGACTACCCAAAAGAGCCGTGGCAGTATTGCCCACGAA
GTTTGGTTCGTACTTGTGCCGTTCGGGTTCAACCGCCGTCGAGGCAGAAG
CAACAGGCGGGGACGTAGCCGTTGGAGATAAGCCACCGATTCTTACAACG
CGAGGTGGAAACTTGAAAGAGGCGACGTCAACGGAGGTCGAAACCTCCGT
TGAGTCGATGGCAGTACATGCTGTCGTACTCTTGGAGTCGAAGCCGACTG
ATCCTTCCGGCAGTGGTGTTGAAAATACGACACCGACAGAAGGATCGGCG
ACGGTTGAATCGAGGGCGACAAATGGGGCTACGCCCAGGAGACAAGAGTC
AACAAAATGTGCTTCCAAAAATGGTGGTTCAAGGGACAGAGGGACGTCTA
CGAAGGACGTGCTAACCTCGGTGTGCGCCGCGACTCTCCGTTCCGTACAA
CCAACTGCTTTTGGCGACGGCATAGTAGTCACCGATGATTGTACTTTGGA
TACGCAGCAGCAGACAGAGGGGCGACACGAAGGGAACAGGGAGAAGGTAA
AGGGTACGATCGCTACGCCAGACGCTATTTGTAGATTGGGCTTCCAACAC
TTCTGGATGAACAACAGAGAGTCGTTGTTGTCAACGGTAGAGCCCGTCGC
TAGAAACAAGTTGGCCAACGAGCATCGCGATGGTGATGGGTACAACAACA
GCCACGAATCCTCTAATGGCACAGAGAAAATTGTCCTCCAAGAAAATCCT
CTCGTACCTCGACGGCCGTCGTCTACACCGCTACACCGAAACGCTCCGGG
GAGGCGACGAACGAGTGTTGTATTCAGCGTCAAGTGAATGAGTGGGCATG
TTTCTCTAGTAAGAAATGATACAATGTGCGAGCACGAGTCTTCCGTTGTT
GCAGGCCGACCTTCGTCTTGTCAGTTTTCGGGTAAGCCTATTCCAAAGAT
CGAAATACCACCTTGTGCTGAAAGCGGCAATCGCCCTGGATCACTGAGCG
AAGCTCCTCTGCGGGATCACATCATGGTATTCGGTGACTCTTGTTCACCT
AGTTGGAGGATTTCTGCTACGCTCGAAGGTAAAAAGCATAGCGATGCAAG
CGGGGGGGCTACCAGTGGTGTTGGCGGGAGATTGGGCATAAACCCCGCAC
GACTACCCAAAAGAGCCGTGGCAGTATTGCCCACGAAGTTTGGTTCGTAC
TTGTGCCGTTCGGGTTCAACCGCCGTCGAGGCAGAAGCAACAGGCGGGGA
CGTAGCCGTTGGAGATAAGCCACCGATTCTTACAACGCGAGGTGGAAACT
TGAAAGAGGCGACGTCAACGGAGGTCGAAACCTCCGTTGAGTCGATGGCA
GTACATGCTGTCGTACTCTTGGAGTCGAAGCCGACTGATCCTTCCGGCAG
TGGTGTTGAAAATACGACACCGACAGAAGGATCGGCGACGGTTGAATCGA
GGGCGACAAATGGGGCTACGCCCAGGAGACAAGAGTCAACAAAATGTGCT
TCCAAAAATGGTGGTTCAAGGGACAGAGGGACGTCTACGAAGGACGTGCT
AACCTCGGTGTGCGCCGCGACTCTCCGTTCCGTACAACCAACTGCTTTTG
GCGACGGCATAGTAGTCACCGATGATTGTACTTTGGATACGCAGCAGCAG
ACAGAGGGGCGACACGAAGGGAACAGGGAGAAGGTAAAGGGTACGATCGC
TACGCCAGACGCTATTTGTAGATTGGGCTTCCAACACTTCTGGATGAACA
ACAGAGAGTCGTTGTTGTCAACGGTAGAGCCCGTCGCTAGAAACAAGTTG
GCCAACGAGCATCGCGATGGTGATGGGTACAACAACAGCCACGAATCCTC
TAATGGCACAGAGAAAATTGTCCTCCAAGAAAATCCTCTCGTACCTCGAC
GGCCGTCGTCTACACCGCTACACCGAAACGCTCCGGGGAGGCGACGAACG
AGTGTTGTATTCAGCGTCAAGTGA back to top
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