mRNA_H-paniculata_contig5067.12338.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5067.12338.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 508 bits (1307), Expect = 9.290e-169 Identity = 276/499 (55.31%), Postives = 332/499 (66.53%), Query Frame = 3
Query: 216 IAVLGAFA-LAPAAVAK----NRPIPQPACDGTKSVDIRYSGASKRLYVEGAGG-VRGGCVTLSQIYETRVGKPPLYPVNPVSGARTTNVTGTWLLTESLHVEDGITLNVHGGSTG-DADELRLLSNADGFIEFRAHGASLSFRDTKVVSWDETAGDYDRNVTDGRSFITVISEVMTD-NRTCVGMAMKSMGEARMDIVKSEMGFLGYYDSESYGLTWKVRGFCADKSNPEVFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMHHNIQYGFDPHDDSDYLNIHDNEVWRNGNHGIIASKRCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALLESFNADVSDNVFQDNTYGIRMSVGSANNMFSYNDILDSVKYNCYTYMGTDLPYVAATGRVLNNKFVGNTLSGGRETIKLKESSGTLFENNSF----TDATVIRLDDA-DAIMKNNTGLR--GVEMKTVAGGCFDLNSDPGFRPTC 1661
+A+LG A PAA A N PI +P CD V IRY+G +KRLY+E A G RGGC TL QI+E+R GK PLY V+P SG + TGTWLLTE L+VEDGITL V+G G DADELRLLS ++ +I RAHG SL F TKV SWD + D + TDGRS+I+ +SE++TD + TC G A +MGEARMDI SE+G+LG+ DSESYGLTWKVRGFC DKSNPE+FDDVNVYGN+YDSDIHH FG+YTYGHQQGDWRRNKMH N YGFDPHDDSD+L IHDNEV+ NG HGIIASKRCN A+LESFNADVS+N F++N YG+RMSVG A+N+FS N I ++ KYN YTY+G+D P V ++GR NN F N+ SG ETIK+KE+ GT F +N F D V+R DDA +++M+ NTGL E+K CFD SD G+ P C
Sbjct: 14 LALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512
BLAST of mRNA_H-paniculata_contig5067.12338.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 498 bits (1281), Expect = 4.760e-165 Identity = 271/473 (57.29%), Postives = 322/473 (68.08%), Query Frame = 3
Query: 261 KNRPIPQPACDGTKSVDIRYSGASKRLYVEGA-GGVRGGCVTLSQIYETRVGKPPLYPVNPVSGARTTNVTGTWLLTESLHVEDGITLNVHGGSTGD-ADELRLLSNADGFIEFRAHGASLSFRDTKVVSWDETAGDYDRNVTDGRSFITVISEVMTDNRT-CVGMAMKSMGEARMDIVKSEMGFLGYYDSESYGLTWKVRGFCADKSNPEVFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMHHNIQYGFDPHDDSDYLNIHDNEVWRNGNHGIIASKRCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALLESFNADVSDNVFQDNTYGIRMSVGSANNMFSYNDILDSVKYNCYTYMGTDLPYVAATGRVLNNKFVGNTLSGGRETIKLKESSGTLFENNSFTDATVIRLDDADA-IMKNNTGLRGVEMKTVAGGCFDLNSDPGFRPTC 1661
+N+ I +P+C + V IRYS SKRLY+E A G RGGCVTL I+ G PLY V P SG ++++TGTWLLTESL+VEDGITL VHG S G ADELRLLS + FI RAHG SL F TKV +WD + + + GRS+I+ +SEV+TD++ C G A K+MGEARMDI SEM +LGY+ SESYGLTWKVRG C D SN EVFD VNVYGNIYDSDIHHNYFGVYTYGH+QGDWRRNKMHHN +YGFDPHDDSD+L IHDNEV+ NGNHGIIASKRCN XXXXXXXXXX AL+E+FNADVS+N F+DN YGIRMSVG A+N+FS NDI S KYN YTY G+D P+V +GR + SGG+ET+KL + GT F +N+F A IR +D +M N+GL G +K G CFD SD ++P C
Sbjct: 27 RNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSDSAYKPVC 499
BLAST of mRNA_H-paniculata_contig5067.12338.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 497 bits (1279), Expect = 1.290e-164 Identity = 263/466 (56.44%), Postives = 316/466 (67.81%), Query Frame = 3
Query: 303 SVDIRYSGASKRLYVEGA--GGVRGGCVTLSQIYETRVGKPPLYPVNPVSGARTTNVTGTWLLTESLHVEDGITLNVHGGSTG-DADELRLLSNADGFIEFRAHGASLSFRDTKVVSWDETAGDYDRNVTDGRSFITVISEVMTD-NRTCVGMAMKSMGEARMDIVKSEMGFLGYYDSESYGLTWKVRGFCADKSNPEVFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMHHNIQYGFDPHDDSDYLNIHDNEVWRNGNHGIIASKRCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALLESFNADVSDNVFQDNTYGIRMSVGSANNMFSYNDILDSVKYNCYTYMGTDLPYVAATGRVLNNKFVGNTLSGGRETIKLKESSGTLFENNSF----TDATVIRLDDA-DAIMKNNTGLRG--VEMKTVAGGCFDLNSDPGFRPTC 1661
+V IRY+G + RLY+E A G RGGCVTL QI+E+R GK PLY V+P SG +T+ TGTWLLTE L+VEDGITL V+G G DADELRLLS + FI RAHG SL F TKV SWD + D + TDGRS+I+ ISE++TD + TC G A +MGEARMDI SE+G+LGY+DSESYGLTWKVRGFC DKSNPEVFDDVNVYGN+YDSDIHH FG+YTYGHQQGDWRRNKMH N YGFDPHDDSD+L IHDNEV+ NG HGIIASKRCN A+LESFNADVS+N F++N YG+R SVG A+N+FS N I ++ +YN Y+Y+GTD P V ++GR NN F N+ SG ETIK+KE+ GT F +N F D V+R D+A + +M+ NTGL E+K CFD +D G+ P C
Sbjct: 43 AVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508
BLAST of mRNA_H-paniculata_contig5067.12338.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 495 bits (1274), Expect = 2.200e-164 Identity = 259/466 (55.58%), Postives = 313/466 (67.17%), Query Frame = 3
Query: 276 PQPACDGTKSVDIRYSGASKRLYVEGAGG-VRGGCVTLSQIYETRVGKPPLYPVNPVSGARTTNVTGTWLLTESLHVEDGITLNVHGGSTG-DADELRLLSNADGFIEFRAHGASLSFRDTKVVSWDETAGDYDRNVTDGRSFITVISEVMTDNR-TCVGMAMKSMGEARMDIVKSEMGFLGYYDSESYGLTWKVRGFCADKSNPEVFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMHHNIQYGFDPHDDSDYLNIHDNEVWRNGNHGIIASKRCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALLESFNADVSDNVFQDNTYGIRMSVGSANNMFSYNDILDSVKYNCYTYMGTDLPYVAATGRVLNNKFVGNTLSGGRETIKLKESSGTLFENNSFTDATVIRLDDAD-AIMKNNTGLRGVEMKTVAGGCFDLNSDPGFRP 1655
P+P CD + +V +RY+ S RLY+E A G RGGCVTL QI+E +V PLY V+P SG + + TGTWLLTE ++VEDGITL VHG S G DADELRLLS +D FI RA+G SL F TKV +WD + D++ +DGRS+I+ +SEV+TD+R TC G A +MGEARMDI SEM +LGY+ +E+YGLTWKVRGFC DK NPE+FDDVNVYGNIYDSDIHHN FGVYTYGHQQGDWRRNKMH N YGFDPHDDSD+L IHDNEVW NG HGIIASKRCN A+LESFNADVSDN F++N YG+R+SVG N+FS N I S ++N ++Y+G D P V +GR +N F+ N + GG E+I LKE+ GT F +N+F DA IR DA +M NTGL +K G FD +SD GF P
Sbjct: 6 PKPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLKVDRGATFDESSDHGFEP 471
BLAST of mRNA_H-paniculata_contig5067.12338.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 496 bits (1276), Expect = 2.680e-164 Identity = 279/470 (59.36%), Postives = 333/470 (70.85%), Query Frame = 3
Query: 264 NRPIPQPACDGTKSVDIRYSGASKRLYVEGAGG-VRGGCVTLSQIYETRVGKPPLYPVNPVSGARTTNVTGTWLLTESLHVEDGITLNVHGGSTG-DADELRLLSNADGFIEFRAHGASLSFRDTKVVSWDETAGDYDRNVTDGRSFITVISEVMTDN-RTCVGMAMKSMGEARMDIVKSEMGFLGYYDSESYGLTWKVRGFCADKSNPEVFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMHHNIQYGFDPHDDSDYLNIHDNEVWRNGNHGIIASKRCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALLESFNADVSDNVFQDNTYGIRMSVGSANNMFSYNDILDSVKYNCYTYMGTDLPYVAATGRVLNNKFVGNTLSGGRETIKLKESSGTLFENNSFTDATVIRLDDAD-AIMKNNTGLRGVEMKTVAGGCFDLNSDPGFRP 1655
N PIP+P CD + +V IRYS +RLY+E A RGGCVTL QI+E + G+ PLY V+ SG + + TGTWLLTE L VEDGITL VHG S G DADELRLLS +D FI RAHG SL F TKV +WD + DR+ DGRS+++ +SEV+TD+ +TC G A +MGEARMDI SEMG+LGY+ SESYGLTWKVRGFC DKSN ++F+DVNVYGNIYDSDIHHN FGVYTYGHQQGDWRRNKMH N YGFDPHDDSD+L IHDNEV+ NG HGIIASKRCN XXXXXXXXXXXXXXXX A++ESFNADVSDN+F++N YGIR SVGS N+F N I S +Y+ Y+Y+G+D P V +GR +N F N + GG E+IKL ++ GT F +N+F DAT IR +DA +M N GL ++K V G FD +SD GF P
Sbjct: 28 NEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSKLKVVNGASFDASSDYGFEP 497
BLAST of mRNA_H-paniculata_contig5067.12338.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 463 bits (1192), Expect = 1.140e-151 Identity = 262/473 (55.39%), Postives = 320/473 (67.65%), Query Frame = 3
Query: 261 KNRPIPQPACDGTKSVDIRYSGASKRLYVEGAGG-VRGGCVTLSQIYETRVGKPPLYPVNPVSGARTTNVTGTWLLTESLHVEDGITLNVHGGSTG-DADELRLLSNADGFIEFRAHGASLSFRDTKVVSWDETAGDYDRNVTDGRSFITVISEVMTDNRT-CVGMAMKSMGEARMDIVKSEMGFLGYYDSESYGLTWKVRGFCADKSNPEVFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMHHNIQYGFDPHDDSDYLNIHDNEVWRNGNHGIIASKRCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALLESFNADVSDNVFQDNTYGIRMSVGSANNMFSYNDILDSVKYNCYTYMGTDLPYVAATGRVLNNKFVGNTLSGGRETIKLKESSGTLFENNSFTDATVIRLDDADA-IMKNNTGLRGVEMKTVAGGCFDLNSDPGFRPTC 1661
KN+ I +P+C + V IRYS +SKRLY+E A G RGGCVTL +I++ G PLY V P SG +++ TGTWLLTE L+VEDGITL VHG S G +A+ELRLLS + FI RAHG SL F TKV +WD + + + RS+I+ +SE++TD++ C G A K+MGEARMDI SEM +LGY SESYGLTWKVRGFC D SNPEVFD+VNVYGNIYDSDIHHN+FGVYTYGH+QGDWRRNKMHHN +YGFDPHDDSD+L IHDN+V XXXXXXXXXXX XXXX AL+ESFNADVS+N F+DN YG+R+SVG A+N+FS N I DS KYN YTY G+D P+V +GR +N F NT++GG E+IKL + GT F +N+F A R +DA+ +M NTGL +K G CFD SD ++P C
Sbjct: 30 KNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSDYKPVC 502
BLAST of mRNA_H-paniculata_contig5067.12338.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 438 bits (1127), Expect = 1.090e-140 Identity = 244/474 (51.48%), Postives = 298/474 (62.87%), Query Frame = 3
Query: 264 NRPIPQPACDGTKSVDIRYSGASKRLYVE-GAGGVRGGCVTLSQIYETRVG------KPPLYPVNPVSGARTTNVTGTWLLTESLHVEDGITLNVHG-GSTGDADELRLLSNA---DG----FIEFRAHGASLSFRDTKVVSWDETAGDYDRNVTDGRSFITVISEVMTD-NRTCVGMAMKSMGEARMDIVKSEMGFLGYYDSESYGLTWKVRGFCADKSNPEVFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMHHNIQYGFDPHDDSDYLNIHDNEVWRNGNHGIIASKRCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALLESFNADVSDNVFQDNTYGIRMSVGSANNMFSYNDILDSVKYNCYTYMGTDLPYVAATGRVLNNKFVGNTLSGGRETIKLKESSGTLFENNSFTDATVIRLDDA-DAIMKNNTGLR-GVEMKTVAGGCF 1625
N PIP+P C+ T++V IRYS + RLY+E G G RGGCVT+ QI+E R G K PLY V+PVSG + +TGTWLL E L+VEDGITL V G GS G ADELRL S DG +I RAHG SL F TKV WD T YD + TDGRS+I+ +SE++ D +TC G A +MGEARMDIV SEMG++G++DSESYGLTWKVRGFC DKSNPEVFD VNVYGNIYDS++HH F VYTYGHQQGDWRRN +H N YG+DPHDDSD+L IHDN V+ N HGIIASKRCN A+LES NA++S N+F+ N YGIRMSVG +N S N + ++ +Y YTY G+D V TGR +N F NT+ GG + IKLKES GT NN F + ++ + + ++ N GL E++ V CF
Sbjct: 107 NTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACF 580
BLAST of mRNA_H-paniculata_contig5067.12338.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 412 bits (1060), Expect = 2.130e-133 Identity = 215/361 (59.56%), Postives = 253/361 (70.08%), Query Frame = 3
Query: 303 SVDIRYSGASKRLYVEGA--GGVRGGCVTLSQIYETRVGKPPLYPVNPVSGARTTNVTGTWLLTESLHVEDGITLNVHGGSTG-DADELRLLSNADGFIEFRAHGASLSFRDTKVVSWDETAGDYDRNVTDGRSFITVISEVMTD-NRTCVGMAMKSMGEARMDIVKSEMGFLGYYDSESYGLTWKVRGFCADKSNPEVFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMHHNIQYGFDPHDDSDYLNIHDNEVWRNGNHGIIASKRCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALLESFNADVSDNVFQDNTYGIRMSVGSANNMFSYNDILDSVK 1367
+V IRY+ ++ RLY+E A G RGGCVTL QI+E+R GK PLY V+P SG +T+ TGTWLLTE L+VEDGITL V+G G DADELRLLS + FI RAHG SL F TKV SWD + D + TDGRS+I+ ISE++TD + TC G A +MGEARMDI SE+G+LGY+DSESYGLTWKVRGFC DKSNPEVFDDVNVYGN+YDSDIHH FG+YTYGHQQGDWRRNKMH N YGFDPHDDSD+L IHDNEV+ NG HGIIASKRCN A+LESFNADVS+N F++N YG+R SVG A+N+FS N I ++ +
Sbjct: 43 AVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403
BLAST of mRNA_H-paniculata_contig5067.12338.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE) HSP 1 Score: 380 bits (975), Expect = 1.220e-121 Identity = 197/312 (63.14%), Postives = 229/312 (73.40%), Query Frame = 3
Query: 198 MAFKRS------IAVLGAFALAPAAVAK-----NRPIPQPACDGTKSVDIRYSGASKRLYVEGAGG-VRGGCVTLSQIYETRVGKPPLYPVNPVSGARTTNVTGTWLLTESLHVEDGITLNVHG-GSTGDADELRLLSNADGFIEFRAHGASLSFRDTKVVSWDETAGDYDRNVTDGRSFITVISEVMTD-NRTCVGMAMKSMGEARMDIVKSEMGFLGYYDSESYGLTWKVRGFCADKSNPEVFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMHHNIQYGFDPHDDSDYLNIHDNEVWRNGNHG 1091
M F+RS +A+LG A A A N PI +P CD +V IRY+ ++KRLY+E A G RGGCVTL QI+E R GK PLY V+P SG + N TGTWLLTE L+VEDGITL V+G G GDADELRLLS D +I RAHG SL F TKV SWD + D + TDGRS+I+ ISE++TD + TC G A +MGEARMDI SE+G+LG+ DSESYGLTWKVRGFC DKSNP +FD+VNVYGN+YDSDIHH FG+YTYGHQQGDWRRNKMH N YGFDPHDDSD+L IHDNEV+ NGNHG
Sbjct: 1 MEFRRSATSSFCLALLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312
BLAST of mRNA_H-paniculata_contig5067.12338.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE) HSP 1 Score: 357 bits (916), Expect = 3.940e-113 Identity = 195/320 (60.94%), Postives = 229/320 (71.56%), Query Frame = 3
Query: 714 EVMTDNRT-CVGMAMKSMGEARMDIVKSEMGFLGYYDSESYGLTWKVRGFCADKSNPEVFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMHHNIQYGFDPHDDSDYLNIHDNEVWRNGNHGIIASKRCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALLESFNADVSDNVFQDNTYGIRMSVGSANNMFSYNDILDSVKYNCYTYMGTDLPYVAATGRVLNNKFVGNTLSGGRETIKLKESSGTLFENNSFTDATVIRLDDA-DAIMKNNTGLRGVEMKTVAGGCFDLNSDPGFRPTC 1661
E++TD++ C G A K+MGEARMDI SEM +LGY SESYGLTWKVRGFC D SNPEVFD+VNVYGNIYDSDIHHN+FGVYTYGH+QGDWRRNKMHHN +YGFDPHDDSD+L IHDNEV+ NGNHGIIASKRCN XXXXXXXXXX XX AL+ESFNADVS+N F+DN YG+RMSVG A+N+FS N I DS +YN YTY G+D P+V +GR +N F NT++GG E+IKL + GT F +N+F A +R +DA D IM NTGL +K G CFD SD ++P C
Sbjct: 6 EIITDSKEKCNGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLGSATLKVSKGACFDKKSDSDYKPVC 325 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5067.12338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5067.12338.1 >prot_H-paniculata_contig5067.12338.1 ID=prot_H-paniculata_contig5067.12338.1|Name=mRNA_H-paniculata_contig5067.12338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=494bp MAFKRSIAVLGAFALAPAAVAKNRPIPQPACDGTKSVDIRYSGASKRLYVback to top mRNA from alignment at H-paniculata_contig5067:8546..13957+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5067.12338.1 ID=mRNA_H-paniculata_contig5067.12338.1|Name=mRNA_H-paniculata_contig5067.12338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5412bp|location=Sequence derived from alignment at H-paniculata_contig5067:8546..13957+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5067:8546..13957+ >mRNA_H-paniculata_contig5067.12338.1 ID=mRNA_H-paniculata_contig5067.12338.1|Name=mRNA_H-paniculata_contig5067.12338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2964bp|location=Sequence derived from alignment at H-paniculata_contig5067:8546..13957+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |