mRNA_H-paniculata_contig506.12327.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig506.12327.1 vs. uniprot
Match: D7FYU7_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYU7_ECTSI) HSP 1 Score: 290 bits (742), Expect = 5.020e-88 Identity = 130/152 (85.53%), Postives = 141/152 (92.76%), Query Frame = 1
Query: 1 VYSNFLINQVPGEWRRRGFASLKPLGSWMKELRWRVRFFELWLQRGNPYAYSLPAFFFPQGFLTAVLQNHARKHAVPVNLLGFKYQFPDIKQPEDATSHPSNGVLVYGMHIEGASWDHASKRLCDPRPDQMRAPAPIVHFLPEVNHHSNPGE 456
VYS FL+NQVP EWRRRGFASLKPLGSWMK+LRWRVRFFELWL+RGNPYA+SLPAFFFPQGFLTAVLQNHARKHAVPVNLLGFK+ PDI QPE+A +HPS+GV VYGMHIEGASWDHA+KRLCDPRPDQMRAPAPIVHFLPE +H NP +
Sbjct: 3987 VYSQFLVNQVPAEWRRRGFASLKPLGSWMKDLRWRVRFFELWLERGNPYAFSLPAFFFPQGFLTAVLQNHARKHAVPVNLLGFKFDIPDIMQPEEAKNHPSDGVFVYGMHIEGASWDHATKRLCDPRPDQMRAPAPIVHFLPETDHEPNPAD 4138
BLAST of mRNA_H-paniculata_contig506.12327.1 vs. uniprot
Match: A0A7S2V192_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V192_9STRA) HSP 1 Score: 148 bits (374), Expect = 4.860e-42 Identity = 71/150 (47.33%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 1 VYSNFLINQVPGEWRRRGFASLKPLGSWMKELRWRVRFFELWLQRGNPYAYSLPAFFFPQGFLTAVLQNHARKHAVPVNLLGFKYQFPDIKQPEDATSHPSNGVLVYGMHIEGASWDHASKRLCDPRPDQMRAPAPIVHFLPEVNHHSNP 450
+Y +FL NQVP W GF SLK LGSW+++L RV F WL G P A+ LP FFFPQGF+T LQ +ARK+ V ++ L FKY + +PED P +GV YG+ +EGA WDH + L P +M P +HF P VNH + P
Sbjct: 26 MYGSFLTNQVPALWSTVGFESLKTLGSWVQDLAHRVTFMRKWLVNGQPPAFDLPVFFFPQGFMTGTLQTYARKYMVAIDTLQFKYNVLNDCEPEDIVEGPEDGVFCYGLWLEGARWDHDEQLLQVSVPGEMYMQLPPIHFQPAVNHKTAP 175
BLAST of mRNA_H-paniculata_contig506.12327.1 vs. uniprot
Match: A0A7S4D9T6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9T6_HETAK) HSP 1 Score: 157 bits (398), Expect = 9.610e-42 Identity = 71/150 (47.33%), Postives = 99/150 (66.00%), Query Frame = 1
Query: 1 VYSNFLINQVPGEWRRRGFASLKPLGSWMKELRWRVRFFELWLQRGNPYAYSLPAFFFPQGFLTAVLQNHARKHAVPVNLLGFKYQFPDIKQPEDATSHPSNGVLVYGMHIEGASWDHASKRLCDPRPDQMRAPAPIVHFLPEVNHHSNP 450
+Y +FL NQVPG W GF SLK LGSW+K+ RV FF WL+ G P A+ LP FFFPQGF+T LQ ARK+ V ++ L FK++ D ++ T P +G++VYG+ +EGA WD ++++ RP +M P P++HF+PEV+H P
Sbjct: 1389 MYMSFLNNQVPGLWSAVGFESLKTLGSWVKDTLGRVAFFRKWLREGQPAAFELPVFFFPQGFMTGTLQTFARKYEVAIDTLSFKFEVLD-REANTITEAPDDGIIVYGLWMEGARWDADARQMAISRPGEMYTPLPVIHFIPEVDHKQKP 1537
BLAST of mRNA_H-paniculata_contig506.12327.1 vs. uniprot
Match: A0A7S3XZW7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZW7_HETAK) HSP 1 Score: 157 bits (398), Expect = 9.620e-42 Identity = 71/150 (47.33%), Postives = 99/150 (66.00%), Query Frame = 1
Query: 1 VYSNFLINQVPGEWRRRGFASLKPLGSWMKELRWRVRFFELWLQRGNPYAYSLPAFFFPQGFLTAVLQNHARKHAVPVNLLGFKYQFPDIKQPEDATSHPSNGVLVYGMHIEGASWDHASKRLCDPRPDQMRAPAPIVHFLPEVNHHSNP 450
+Y +FL NQVPG W GF SLK LGSW+K+ RV FF WL+ G P A+ LP FFFPQGF+T LQ ARK+ V ++ L FK++ D ++ T P +G++VYG+ +EGA WD ++++ RP +M P P++HF+PEV+H P
Sbjct: 1396 MYMSFLNNQVPGLWSAVGFESLKTLGSWVKDTLGRVAFFRKWLREGQPAAFELPVFFFPQGFMTGTLQTFARKYEVAIDTLSFKFEVLD-REANTITEAPDDGIIVYGLWMEGARWDADARQMAISRPGEMYTPLPVIHFIPEVDHKQKP 1544
BLAST of mRNA_H-paniculata_contig506.12327.1 vs. uniprot
Match: C1MTS7_MICPC (Dynein heavy chain n=3 Tax=Micromonas pusilla TaxID=38833 RepID=C1MTS7_MICPC) HSP 1 Score: 156 bits (394), Expect = 3.440e-41 Identity = 71/151 (47.02%), Postives = 100/151 (66.23%), Query Frame = 1
Query: 1 VYSNFLINQVPGEWRRRGFASLKPLGSWMKELRWRVRFFELWLQRGNPYAYSLPAFFFPQGFLTAVLQNHARKHAVPVNLLGFKYQFPD-IKQPEDATSHPSNGVLVYGMHIEGASWDHASKRLCDPRPDQMRAPAPIVHFLPEVNHHSNP 450
+Y+NFL NQVPG W + + SLKPLG W+ + R+ F WL++GNP Y LP FFFPQGF+T VLQ HARK+A P++ L F ++ D ++ PED + P +GVL+ G+ ++ A W+ A K L + P M + P+VHF+P V HH+ P
Sbjct: 3991 MYTNFLNNQVPGVWEKAAYPSLKPLGGWIADYHRRIEFVHTWLRQGNPKTYWLPGFFFPQGFMTGVLQTHARKYAQPIDSLNFTFEVLDGVETPEDVVAAPEDGVLIDGLFVDNARWNRAEKYLDESEPGIMCSDLPVVHFIP-VQHHNPP 4140
BLAST of mRNA_H-paniculata_contig506.12327.1 vs. uniprot
Match: A0A7S1U3A9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3A9_9STRA) HSP 1 Score: 152 bits (384), Expect = 7.220e-40 Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = 1
Query: 1 VYSNFLINQVPGEWRRRGFASLKPLGSWMKELRWRVRFFELWLQRGNPYAYSLPAFFFPQGFLTAVLQNHARKHAVPVNLLGFKYQFPDIKQPEDATSHPSNGVLVYGMHIEGASWDHASKRLCDPRPDQMRAPAPIVHFLPEVNH 438
+Y+ F+ N VPG W FASLK LGSW+K+L +RV F WL+ G P A+ +P FFFPQGF+T LQ +ARK+ V ++ L FKY + ED T P +GV VYG+ +EGA WD +K++ RP +M P P VHF PEV+H
Sbjct: 985 MYTAFMSNAVPGIWSSVSFASLKTLGSWVKDLIFRVEFMCNWLKNGQPVAFPMPVFFFPQGFMTGTLQTYARKYQVAIDTLNFKYDVLETPA-EDITEAPDDGVFVYGLWMEGARWDAEAKKMAISRPGEMYTPIPTVHFQPEVDH 1129
BLAST of mRNA_H-paniculata_contig506.12327.1 vs. uniprot
Match: A0A7S0S9E2_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0S9E2_9CHLO) HSP 1 Score: 145 bits (365), Expect = 8.770e-39 Identity = 68/151 (45.03%), Postives = 97/151 (64.24%), Query Frame = 1
Query: 1 VYSNFLINQVPGEWRRRGFASLKPLGSWMKELRWRVRFFELWLQRGNPYAYSLPAFFFPQGFLTAVLQNHARKHAVPVNLLGFKYQFPDIKQ-PEDATSHPSNGVLVYGMHIEGASWDHASKRLCDPRPDQMRAPAPIVHFLPEVNHHSNP 450
+Y+NFL NQVPG W R + SLKPLG WM++ R+ F WLQ GNP Y LP FFFPQGF+T VLQ HARK+A P++ L F ++ + K+ ED ++GVL+ G+ ++ A W+ + L + P M + P+VHF+P + H++ P
Sbjct: 208 MYTNFLNNQVPGIWERAAYPSLKPLGGWMEDYHKRIAFMRNWLQHGNPKTYWLPGFFFPQGFMTGVLQTHARKYAQPIDSLNFTFEVLEGKEVAEDVAEAVADGVLIDGLFVDNARWNREERFLDESEPGVMCSNLPVVHFVP-IQHYNPP 357
BLAST of mRNA_H-paniculata_contig506.12327.1 vs. uniprot
Match: A0A024U1Z6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1Z6_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.310e-38 Identity = 72/144 (50.00%), Postives = 92/144 (63.89%), Query Frame = 1
Query: 1 VYSNFLINQVPGEWRRRGFASLKPLGSWMKELRWRVRFFELWLQRGNPYAYSLPAFFFPQGFLTAVLQNHARKHAVPVNLLGFKYQFPDIKQPEDATSHPSNGVLVYGMHIEGASWDHASKRLCDPRPDQMRAPAPIVHFLPEV 432
Y + L+ QVP EW + GFASLKPL SW+ +L RV+FF WL+ G P + LP+FFFPQGFLT VLQNHARKH VP+N L F + P D ++G +V G+ +EG WD K L D RP++M + P +HFLP V
Sbjct: 4011 TYKSLLLKQVPPEWHKVGFASLKPLSSWLVDLVERVQFFREWLEHGQPTTFPLPSFFFPQGFLTGVLQNHARKHLVPINTLEFSFAI----DPPDLVV--ADGAIVTGLFLEGGRWDGDRKVLTDARPNEMLSVLPPIHFLPNV 4148
BLAST of mRNA_H-paniculata_contig506.12327.1 vs. uniprot
Match: A0A5J4V563_9EUKA (Putative dynein heavy chain (Fragment) n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4V563_9EUKA) HSP 1 Score: 141 bits (356), Expect = 8.160e-38 Identity = 67/150 (44.67%), Postives = 98/150 (65.33%), Query Frame = 1
Query: 1 VYSNFLINQVPGEWRRRGFASLKPLGSWMKELRWRVRFFELWLQRGNPYAYSLPAFFFPQGFLTAVLQNHARKHAVPVNLLGFKYQFPDIKQPEDATSHPSNGVLVYGMHIEGASWDHASKRLCDPRPDQMRAPAPIVHFLPEVNHHSNP 450
VY LI++VP +W + SLKPLG+W+ +L R+ FF WL +G P ++ FFFPQGFLTAVLQ +ARK+ +P++ L FKYQ K+ T+ P +GV +YG+ +E ASWD S ++ + RP +M A P++HFLP+ ++ P
Sbjct: 217 VYDAILISKVPNQWADAAYPSLKPLGAWVADLIERILFFRQWLTQGMPSSFWFSGFFFPQGFLTAVLQTYARKYKLPIDTLRFKYQALKDKKDTIQTA-PPDGVYIYGLFMEAASWDDRSMKMSESRPGEMYAVMPVLHFLPQKDYQPPP 365
BLAST of mRNA_H-paniculata_contig506.12327.1 vs. uniprot
Match: A0A5J4UEY2_9EUKA (Putative dynein heavy chain n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4UEY2_9EUKA) HSP 1 Score: 136 bits (342), Expect = 1.920e-37 Identity = 65/150 (43.33%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 1 VYSNFLINQVPGEWRRRGFASLKPLGSWMKELRWRVRFFELWLQRGNPYAYSLPAFFFPQGFLTAVLQNHARKHAVPVNLLGFKYQFPDIKQPEDATSHPSNGVLVYGMHIEGASWDHASKRLCDPRPDQMRAPAPIVHFLPEVNHHSNP 450
VY L VP W + SLKPLG+W+ +LR RV FF+ WL +G P + FFFPQGFLTAVLQ ARK+ P++ L F+YQ + ++ T P +GV VYG+ +E ASWD + ++ + +P +M A P++HFLP+ ++ + P
Sbjct: 8 VYDAILRGAVPTAWADAAYPSLKPLGAWVVDLRARVEFFQDWLTKGMPSTFWFSGFFFPQGFLTAVLQTFARKYKCPIDTLRFRYQAQK-ETKDEITEAPQDGVYVYGLFMEAASWDDKNMKMAESKPGEMYAVMPVLHFLPQRDYIAPP 156 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig506.12327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig506.12327.1 >prot_H-paniculata_contig506.12327.1 ID=prot_H-paniculata_contig506.12327.1|Name=mRNA_H-paniculata_contig506.12327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=153bp VYSNFLINQVPGEWRRRGFASLKPLGSWMKELRWRVRFFELWLQRGNPYAback to top mRNA from alignment at H-paniculata_contig506:7267..8153+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig506.12327.1 ID=mRNA_H-paniculata_contig506.12327.1|Name=mRNA_H-paniculata_contig506.12327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=887bp|location=Sequence derived from alignment at H-paniculata_contig506:7267..8153+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig506:7267..8153+ >mRNA_H-paniculata_contig506.12327.1 ID=mRNA_H-paniculata_contig506.12327.1|Name=mRNA_H-paniculata_contig506.12327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=918bp|location=Sequence derived from alignment at H-paniculata_contig506:7267..8153+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |