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Homology
BLAST of mRNA_H-paniculata_contig5053.12318.1 vs. uniprot
Match: A0A6H5K6N9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N9_9PHAE) HSP 1 Score: 150 bits (380), Expect = 4.570e-37 Identity = 74/160 (46.25%), Postives = 99/160 (61.88%), Query Frame = 3
Query: 1107 YEVREDGTERFVVAGRPLHRGDVIFDRVFGRVLKEPVQHSIQVTNGVHVDTDGDLRFVNHSCAPNCRMEVSPAAGGEDPFLRITVVAPTIEPGEELTVDYNAFELEMVNPFDCVCGVPSCRKRITGFTRLPVALRRQYLDHGHNAEQPSLLTPFVKAWGE 1586
Y V +DGTE+FVVA R L V+F RV G V +HS+Q++ H++T DL +NHSC PNC++EV A E P+LR+TV AP ++P E L +DYNA E++M PFDC CG CR ++GF+ L A + +Y+D G P LT VK W E
Sbjct: 103 YTVVQDGTEKFVVAARVLEANQVLFSRVEGLVTGVKTRHSVQLSKERHLETGSDLALMNHSCEPNCQLEVVDTA--EQPYLRVTVRAPRVQPNEALEIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEQEEYIDGGATGSPP--LTGAVKTWAE 258
BLAST of mRNA_H-paniculata_contig5053.12318.1 vs. uniprot
Match: A0A6H5JKC4_9PHAE (Post-SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKC4_9PHAE) HSP 1 Score: 130 bits (327), Expect = 3.570e-29 Identity = 76/210 (36.19%), Postives = 101/210 (48.10%), Query Frame = 3
Query: 1107 YEVREDGTERFVVAGRPLHRGDVIFDRVFGRVLKEPVQHSIQVTNGVHVDTDGDLRFVNHSCAPNCRMEVSPAAGG------------------------------------------------EDPFLRITVVAPTIEPGEELTVDYNAFELEMVNPFDCVCGVPSCRKRITGFTRLPVALRRQYLDHGHNAEQPSLLTPFVKAWGEAN 1592
+ V +DGTE+F+VA R L IF RV G V +HS+QV+ H++ DL F+NHSC PNC++EV AA E P+LR+TV AP I P E LT+DYNA E++M PFDC CG CR ++GF+ L A +++Y+D G P LT VK W + N
Sbjct: 146 FTVVKDGTEKFLVAARVLEANQAIFARVEGLVTGVSTRHSVQVSKERHLEARCDLMFLNHSCEPNCQLEVVDAADHWVGWKSWANPNPIGIRKGVIEILKCSTLEKYCSNNRRAHAMNTFCNPQEQPYLRVTVRAPRIRPNELLTIDYNAMEIDMSCPFDCQCGAVRCRGWVSGFSNLSRAEQKEYIDGGATKSPP--LTGAVKTWAQEN 353
BLAST of mRNA_H-paniculata_contig5053.12318.1 vs. uniprot
Match: D8LGU6_ECTSI (Post-SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU6_ECTSI) HSP 1 Score: 105 bits (262), Expect = 2.670e-23 Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 3
Query: 1278 VNHSCAPNCRMEVSPAAGGEDPFLRITVVAPTIEPGEELTVDYNAFELEMVNPFDCVCGVPSCRKRITGFTRLPVALRRQYLDHGHNAEQPSLLTPFVKAWGE 1586
+NHSC PNC++EV A E P+LR+TV AP ++P E LT+DYNA E++M PFDC CG CR ++GF+ L A + +Y+D G P LT VK W E
Sbjct: 1 MNHSCEPNCQLEVVDTA--EQPYLRVTVRAPRVQPSELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEQEEYIDGGATGSPP--LTGAVKTWAE 99
BLAST of mRNA_H-paniculata_contig5053.12318.1 vs. uniprot
Match: G4ZNZ4_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZNZ4_PHYSP) HSP 1 Score: 85.9 bits (211), Expect = 3.250e-15 Identity = 46/117 (39.32%), Postives = 65/117 (55.56%), Query Frame = 3
Query: 1134 RFVVAGRPLHRGDVIFDRVFGRVLKEPVQHSIQVTNGVHVDTDGDLRFVNHSCAPNCRMEVSPAAGGEDPFLRITVVAPTIEPGEELTVDYNAFELEMVNPFDCVCGVPSCRKRITG 1484
R VAG+ + DVI G + +P + ++Q+T H+D G L FVNHSC PN R+++S + + + + P IE GE LT DY+ E +M FDC CG P+CR I G
Sbjct: 69 RSAVAGQNFKKDDVIGSAP-GNLYSKPTRFTVQITPDKHMDFTGGLEFVNHSCNPNTRIDMSES----EAMVSFVAIKP-IEKGEHLTFDYSTSEWDMDEKFDCGCGAPNCRGHIGG 179
BLAST of mRNA_H-paniculata_contig5053.12318.1 vs. uniprot
Match: A0A328B7D7_9CAUL (SET domain-containing protein n=1 Tax=Phenylobacterium kunshanense TaxID=1445034 RepID=A0A328B7D7_9CAUL) HSP 1 Score: 80.1 bits (196), Expect = 8.290e-14 Identity = 43/116 (37.07%), Postives = 61/116 (52.59%), Query Frame = 3
Query: 1155 PLHRGDVIFDRVFGRVLKEPVQHSIQVTNGVHVDTDGDLRFVNHSCAPNCRMEVSPAAGGEDPFLRITVVA-PTIEPGEELTVDYNAFELEMVNPFDCVCGVPSCRKRITGFTRLP 1499
P H G+ F R G + E QHS+QVT +H+ + +++HSC PNCR+++ +R + A I PGE LT+DY E + F C CG P CR+ +TG LP
Sbjct: 33 PRHAGET-FHRFTGVISPELRQHSLQVTEDLHISETRFIGYLSHSCEPNCRLDM----------VRFELSALRDIAPGERLTIDYAETEDRLYRQFACECGAPDCRRWVTGRRELP 137
BLAST of mRNA_H-paniculata_contig5053.12318.1 vs. uniprot
Match: A0A0P1ACW5_PLAHL (Zinc-binding region-containing partial n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACW5_PLAHL) HSP 1 Score: 79.0 bits (193), Expect = 6.990e-13 Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 3
Query: 1134 RFVVAGRPLHRGDVIFDRVFGRVLKEPVQHSIQVTNGVHVDTDGDLRFVNHSCAPNCRMEVSPAAGGEDPFLRITVVAPTIEPGEELTVDYNAFELEMVNPFDCVCGVPSCRKRITG 1484
R +AG+ H D+I G V EP + ++QVT H+ G L FVNHSC PN R+++S + + + + P I GE LT DY+ E +M F C CG SCR I G
Sbjct: 63 RSTIAGQKFHPNDII-GSALGSVYSEPTRFTVQVTPDKHMYFTGGLEFVNHSCDPNTRIDISES----EAKVSFIAIKP-INQGEPLTFDYSTSEWDMDEKFKCSCGSFSCRGDIKG 173
BLAST of mRNA_H-paniculata_contig5053.12318.1 vs. uniprot
Match: A0A521PS19_9CAUL (SET domain-containing protein-lysine N-methyltransferase n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A521PS19_9CAUL) HSP 1 Score: 75.1 bits (183), Expect = 4.720e-12 Identity = 47/123 (38.21%), Postives = 64/123 (52.03%), Query Frame = 3
Query: 1155 PLHRGDVIFDRVFGRVLKEPVQHSIQVTNGVHVDTDGDLRFVNHSCAPNCRMEVSPAAGGEDPFLRITVVAPTIEPGEELTVDYNAFELEMVNPFDCVCGVPSCRKRITGFTRLPVALRRQYL 1523
P +G VI G + E +QHS+QV+ G+H+ + F++HSC P+CR+++ A E LR I PG+ LT+DY E + F C CG CR ITG T P A R YL
Sbjct: 37 PRRKGQVIH-HFTGVLTPELLQHSLQVSPGMHITQTEIIGFLSHSCEPDCRLDM---ARSELVALR------DIRPGDLLTIDYAETEDVLYRQFACHCGAARCRHWITGRTEQPNAEGRAYL 149
BLAST of mRNA_H-paniculata_contig5053.12318.1 vs. uniprot
Match: D0MR16_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MR16_PHYIT) HSP 1 Score: 76.6 bits (187), Expect = 1.410e-11 Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = 3
Query: 1134 RFVVAGRPLHRGDVIFDRVFGRVLKEPVQHSIQVTNGVHVDTDGDLRFVNHSCAPNCRMEVSPAAGGEDPFLRITVVAPTIEPGEELTVDYNAFELEMVNPFDCVCGVPSCRKRITG 1484
R VAG+ + DVI G V P + ++Q+T H+D G L FVNHSC PN R+++S + + + + P I+ GE LT DY+ E +M FDC CG +C I G
Sbjct: 127 RSAVAGQTFKKDDVIGSAP-GTVYPTPTRFTVQITPDKHMDFVGGLEFVNHSCNPNTRIDMSES----EAKVSFIAIKP-IKEGEHLTFDYSTSEWDMNEKFDCRCGASTCSGHIGG 237
BLAST of mRNA_H-paniculata_contig5053.12318.1 vs. uniprot
Match: A0A0L0NJD4_TOLOC (Histone-lysine N-methyltransferase ash1 n=2 Tax=Tolypocladium TaxID=29909 RepID=A0A0L0NJD4_TOLOC) HSP 1 Score: 73.9 bits (180), Expect = 8.500e-11 Identity = 40/135 (29.63%), Postives = 65/135 (48.15%), Query Frame = 3
Query: 1200 VLKEPVQHSIQVTNGVHVDTDGDLRFVNHSCAPNCRMEVSPAAGGEDPFLRITVVAPTIEPGEELTVDYNAFELEMVNPFDCVCGVPSCRKRITGFTRLPVALRRQYLDHGH-----NAEQPSLLTPFVKAWGEA 1589
V +EP ++Q H++ + DL F+NHSC P+ + L + V + PG+ELT Y + E +M PFDC+CG P+CR I G + +GH + ++P+ + P +A +A
Sbjct: 52 VAEEPTYATVQTGKNSHLNLNSDLLFINHSCEPSLIFDTG--------NLNVLVGPKGLRPGDELTFFYPSTEWDMAQPFDCLCGTPTCRGTIGGARNMTSKQLEGTWLNGHIRALLDEQKPNGIDPTARALSDA 178
BLAST of mRNA_H-paniculata_contig5053.12318.1 vs. uniprot
Match: UPI002008E60C (uncharacterized protein n=1 Tax=Daldinia caldariorum TaxID=326644 RepID=UPI002008E60C) HSP 1 Score: 74.3 bits (181), Expect = 1.220e-10 Identity = 51/185 (27.57%), Postives = 78/185 (42.16%), Query Frame = 3
Query: 1212 PVQHSIQVTNGVHVDTDGDLRFVNHSCAPNCRMEVSPAAGGEDPFLRITVVAPTIEPGEELTVDYNAFELEMVNPFDCVCGVPSCRKRITGFTRLPVALRRQYLDHGHNAE-----QPSLLTPFVKAWGEANLETAPRS*VVSSEPHNSENMHTEGLGLM*APHHQDGFVYNKRSCIEYVGLLCQ 1751
P ++Q H+D + DL ++NHSC P+ + + + + + PGEELT Y + E M PFDC+CG PSCR RI G + A +GH E + ++ G N E AP + SS + T G GL P +D R+ + + + +
Sbjct: 56 PSYATVQCGRDAHLDLNSDLLYINHSCEPSLIFDTA--------NMNVRAGPNGLSPGEELTFFYPSTEWSMAQPFDCLCGAPSCRGRIAGAKDMSEAQLAGLWLNGHILELLEEREREREGNDLRDMGTRNKEPAPENGTSSS------STLTAGGGLTEIPPPEDLTAQALRNALAHAEKVVE 226
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 87.0 |
| Seed ortholog evalue | 1.6e-14 |
| Seed eggNOG ortholog | 67593.Physo158570 |
| KEGG rclass | RC00003,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K06101,ko:K07117,ko:K11423,ko:K11424,ko:K14437 |
| KEGG Reaction | R03875,R03938,R04866,R04867 |
| KEGG Pathway | ko00310,ko05202,map00310,map05202 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0000003,GO:0000228,GO:0000803,GO:0000805,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0007275,GO:0007530,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009892,GO:0009987,GO:0010452,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016278,GO:0016279,GO:0016458,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018022,GO:0018024,GO:0018193,GO:0018205,GO:0018992,GO:0019222,GO:0019538,GO:0022414,GO:0030849,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0034968,GO:0036211,GO:0040029,GO:0042054,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046975,GO:0048519,GO:0048856,GO:0050789,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0140096,GO:1901564 |
| EggNOG free text desc. | SET domain |
| EggNOG OGs | COG2940@1,KOG1081@2759 |
| EC | 2.1.1.43,3.6.4.12 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03036 |
| Exons | 4 |
| Model size | 2806 |
| Cds size | 897 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5053.12318.1 >prot_H-paniculata_contig5053.12318.1 ID=prot_H-paniculata_contig5053.12318.1|Name=mRNA_H-paniculata_contig5053.12318.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=299bp
MSLLSSKNACAKLPIRARNAVQCELGRRGMRLHSPTMLQAKNCEYSPIKD
IDCGSGLTRVLPHSSVGPSFKGAMHASCSAPVWQTTDIFTRSQDKPPGLL
LAACDRMRAPRQLRGYSTAQYSTVRVTEIYEVREDGTERFVVAGRPLHRG
DVIFDRVFGRVLKEPVQHSIQVTNGVHVDTDGDLRFVNHSCAPNCRMEVS
PAAGGEDPFLRITVVAPTIEPGEELTVDYNAFELEMVNPFDCVCGVPSCR
KRITGFTRLPVALRRQYLDHGHNAEQPSLLTPFVKAWGEANLETAPRS* back to topmRNA from alignment at H-paniculata_contig5053:1210..11381+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5053.12318.1 ID=mRNA_H-paniculata_contig5053.12318.1|Name=mRNA_H-paniculata_contig5053.12318.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10172bp|location=Sequence derived from alignment at H-paniculata_contig5053:1210..11381+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGCACAGCAACCGAACACGATACAGTTGGCGTTTGTGAAGAAGATGAAGC
GACGGTTCCAACGATGATGCAGTGCAGTCATGGCGTACTACACATAGCAG
TAACTCGGCGGGATGAACCTTCTTTTGGGTTGCTTGCTGCCTCTACTGCC
CAAGATGCCATTGCGTAAAGTACGCAAAACAGATATCAAAGTACACAAGA
CATCCAAGAGGAGAGCACCGCATGAGTGCTCGCTAAATTGTTGCAGAAGC
AGGGTTCAGTTCAGCTCGCACAACATGTTTGAATCATTGCCCACACCAAG
CACCAGCGAGATCAACTGCGCACAGCTCCAGCTGTCACCGAATTACGCCG
CATTCCCGCGGTTGATAGTGTTACCCTTGCGAGTTAACACGCCTCGTCGT
GCGGACGAGGGGCTGGGGACGCGGTGGACCGACCAAAACCCCTACGAAAA
TGTCTTACTCCTGTTGTCTGAATTGATATAGGCTTTTTCGGGCCACCCGG
ATCGCCTTGGACTAGTCCACGTATATAAATAACAACTAAACTTTCCCCTT
GTTTACGATCCGAATGAACCGCGGGTCTGAGCGATCGAGCTGCTATCGAA
AATATCTTGTACAAGAGTAACCATAGGTGGAAACCACACCCAGTGCCAGC
CACCATTGACCCCAGAATACCATCGACACGAAGATCCAACACAGGAAATT
CCCGGACGTGCGGTACACTATGAGTCTCCTGTCGAGTAAAAATGCGTGTG
CAAAATTGCCTATACGAGCACGAAACGCAGTTCAATGTGAATTGGGACGG
CGCGGGATGCGGCTGCACAGTCCCACCATGCTGCAGGCAAAGAATTGCGA
ATATTCTCCCATCAAAGATATCGACTGTGGCAGTGGGCTTACCCGTGTTC
TACCTCATTCGTCCGTGGGGCCTTCCTTCAAGGGTGCCATGCATGCGTCT
TGCTCCGCCCCAGTATGGCAGACGACAGATATTTTCACAAGGAGCCAAGA
CAAGCCGCCCGGACTGCTGCTTGCAGCTTGCGATCGGATGCGAGCTCCTA
GACAGGTATTTACATGTGCAAAAGCGTTCTCGTGATGGCGAATGCTGGCG
AATCTTTGATCTTGGATTCTGGTGGCGCACAAAAAAACAGAATGTTTCGA
TTATTTCAATGCAACATGTAACCTCTTCTGTGTCCAGTAGAATTGTCGAT
CAGGACCGCACGCTGATGGTTGGTGCAACCGAAGTCGACGAAATCCAACT
TCAGCGCCGGGCCGTCACAGTTATCTATTTTTGTATGAAAACCATACCAG
GCGGTCGGACAAAAGGGAATCTTCGTTTCTTTGCTGATGCATGTATATGA
TGAAATCCTGTTCTTTCCTTGTTAGTGAAGTAGGACTGGTTATTTATGTC
CGCCTATATTAACTTGCTCTATATTAACTTGCTGCCCATTCAGTGTCGTG
ACTACTATACTGTATTGACCATGATGTGCTGCACTGTACTGCAATATAGA
ACCGTACTGTGGACCAAGTTCAGATCAACTCAAAAATAGTACCTGCCGAA
CAGAAGTCTATTTTGTCCGTGTCGGCATCATATGTTGGCCCTTGGGGGTA
CTGCTCTTGGCAATAATCGATCGTGGCGCCGTCAACTTTTGGTGTCGAGT
CTCTTTGTGGTTGTCTTGCCTGTTGTCTTTCTCTTGATCTTTATTGGCGT
GAGTAAGTTGACTGTTTTTTGCTAGTGCCACCTGCTCGGTGTAGTTGTCC
GGAAGGTGCGGGTGTGTCCTTGTGGGGTTGCTCTTGGTTGGAGTATTATG
AGCTGTTCGTACTTTGCAGCATTGTGCAGTATTACAAGTGCACAGCGATG
ATTGTTTTCACCGCTTTTGGCTTCGCCGCTTTTTGTTTTTTTGTGCAAGG
AGTCGGAGCCTTTGAGCCCCTCCACGTCCTGTACACCAGTGTACAGTCAG
TCGCGGGCTTTTCGTCGTCTGTGTGCATGCGTGTGTCTGTTTGGTGTATT
AGCACTGCTGCTGTGTGCTTAGTGTGAATTGTCTGTTGGCTACAGTCGCC
TGAACGCCGGTGTTCGCTGCCATGTCCTCGCGTACATTAAAGTCTTTTTT
CCACGAACGGCGACATTTGCTCATACAATGGCCGCCCCTCTTGGCTCCAG
TCGGCCTTTTAATTATTTTCGGTGTGTGTCTGTGTCTGTTCATGCGTATG
GTTGTCCACGTCATCGGCATTACTGAATTTTGCAATCTGTTTGCTGTGTT
TCTATCGTCAAGATGGTTTGTATGTCTTTTGGCCCTCTCGCTCGTGTCTT
TTGATTTTTAATGGTGCACCACTGTTGATCACCCACCTGACTCTTTTAGC
CTGTTTTTTGTTTCACCTTGAGCTAGCTACCCATTTTGACTCCTGCCATG
CTCCTCCTTCGTGTTGTATGCACATCCCCTACCATCCTTTCTTCCCTGCT
CTCTTGCCGCTTTTTCTGCGCCTGCGCACTTCGTATGTCTTTTACCCTGC
TACTCACCCTTTCGTCCACAAACGTTTCATGGTCGCTCGATCTTCCGCAG
ACGGCCGAATGGCCGGCTGCGGTCTTCGGCTACAGGAAGATGCAACAGTG
ACAGATAGAAAAAAGTGAGCTATCGAATGCCTTCGTTGCAACAGCCGAAG
GAAGCGCATCGATCGTCGCTAGTTTTGGCCTCGACCTGCCCAGAGGGGAA
CTCGGGGATCTAACGCGGCCTATGCCCTCTTGGCTGTAGCACCGCCGATG
AACCTACTACAGTGAGTTTTGACCTGCTAAAAATAAATCGATTCGATGAT
GGATCTGACGATATATCATGCATGTTCCACCCCGAGGTGTCAAGGTACCC
CCCCCCCACCCTGTCAGCGCTCCTCACCGCACTTCTGTGCGTCTAGGTCC
TGCTGAGTCTTATAGTAGATATTTAGGCTTCTTTGTACGCCATGCAAGTA
TTTCTCATGTGTGTAGAACATGCAACAGCGGAAGGCAGGCAACCAATGCT
GCAGCACTACCTTGTCTTTTCATGATTTGATCGTACAACCGACAGGTGTA
CTTGTTTTACGTGATTAATTTCGAGGTTGCGCAGACCCGTAGATCGAAAA
AATGGAGACAGAAACTAGACTGTCAAAGCTCACAGGGGTGTTCATGTGCT
AGCTGCTTCAAACAATTAATATAAATTGGAGAGCAGGGAGAACCTGCAGC
ACGTCACATTTTGCTACAGATTATAATTTATCGTTGATTGTGTAAAGAAC
ACAATGCTCAGTCATATTCGAACGACCGAGTTTGTGCTTGAATTGGGCGT
ATGCAAGTGATGTTTTTACTTGTATTCCATTTATTCCCTCTTGCAAAATA
CTTGGTCCCATAGGTATTATATTGCTATACTCTCCCGCAGACGTCGCACG
ACTGTCAACCCCTTCCTACGATCTTCTAACGATCTACCCCCCATCCCCAA
AACTGTACTGGAGGCTCAGTATGATAGATTCTTTCGCCACCCTTTAGTCC
AGTTGCTCAGACCCACTGGTGACAACTGGTACCCCACGAAGTGCTGAATA
ATAACATTGTGTACAAGAAATCGCCCCCCTTCCCCCCCCCGAGAGCCTTT
ATCGCACTTCTTGGGGTGTGGCCCAAGCACTGCCTTTCGTGTAACCCGTT
TGGGGGCTGGAAGTATGCTCAGCATCTAGAAGCTGCTGAATTACTTATCC
ACAAATTGAACAGACGTAAGGGCAGGAAGGGAATCTGGGCTTTCTTTAAT
ATACCTGTCACCTTCATGTAGTGAACTGAGTCCCGCACGTGCATATGCTG
GATAGTATTCAAAACAATACTTCGGTTTTCCCCGTCGAGGCGGTTTGGAG
TGTATATGCACTTCAATTTGCTACCCGCCATACTACTTGTTTTAATCGCG
ACCGTTCGTTATCGTTTTTGATTCCTTTCGAGAAATTTGGTCGGCGGAGT
TAGTGAGCTGCTGAGTGATAACATAGCGACACTCAACATCTACAGATGCC
AACTTCCAAGAAGTTGGGGTCAATTATGTGCACGTCATCGCACTGGAGGC
TCTTGCCTACGGGTGAAAGTTGGGGCATCTAAAGTCATTTTCTAATCTGG
CATAAAATGAGATCGAGAAGATCTCGGGTCACGCCAGTCTCGTGTAACGC
TACTACACACACAAACACACGTTGTCAGTGGGATATGATTGACAGTGAGA
TACGGACACCTAGCTTCTGGATAGAGGCGGTTCGGGATGTCTTTCTGGTC
GACTTTAGATCCACCGTTGACCCTCTCAGGACCATTCTAAACGGGGATAA
TTTTTCCTTTTATCTGTGAGACGATGAGATCGTGTAAGAAATAATTAAAT
ATGGAACTAGAGTTACGGAACGCTGTAGATAGAAATCATCAGTTTTTCGT
TTTCGAAAATTCGATAGTTCCAGAAGATCAAAGAAAACAGGAGAAAGAGG
AAAAATCGGGAATGTTTAGGATGGCCTTACATGCCAGTTCCTGTCGACTT
TATCCCACCCTTGAGCAAGAACTCGTGGAATCTCCTCGAAACGTTTATTC
ACACTCTCATGTGATTTCTTGTTTGTTGTTGTTTCATCAACGTCATTCAC
AATAAAAATAATTCCAAATAAACAAAAGGAATCTTCGTGAAAAGCAGTGG
AGTATGATGACACTACCTATGAATATTCCAACCTCCCTAATTTACCCTCC
ACTCCCCCCCCAAGATTGGAATATTGCTGAACTTGAACGAAACGGCGTGA
GATTCAATATTTTTTTCGCGACATTCCTGCCCTGAGTGCCAGAACAGGGA
AGGATGATGTCTGTGATACAGTCACGGTGATATGCAGCCGCCACTGTTTA
GGCAAACCATCCATTGCAAACAGTAGCCGAGCCCTGCAGCTGTTATAGAA
CCACGCCAACTGCCAAGTGACAAATGACAAAAGAAAAATGGGCTCTCTCG
CACACATCCTGCAATGTTCAATTTTAACCTGGGCTGTGCGGTGAATCGGA
CATGGTGACACCGTAAGATCGGTCCCACCAGGGGGCCGCGTCTCCCGGTT
GTGAAGTTAGATTAGCGCTGAAGCCGGTACCTCTCTCTCTCGGTTCTTCG
TACGTTCGTATGTGGTGGAGGCTCTGTCCTACAGTATAATGGCAGTATGT
TATATTGCAATTGATTGTATCATGTATTTGCATGGCGACCTACTGCACTG
TCTTGAACATTTCTGGCCAATCGTCCATGCTTTGACTTTTGACAAACACC
TGCTCTTGCTTTTCATTATGACCTCTGCCCAACACTTTGAAGAGGATGCT
CTTCGCCAATTGCCCATGCGTGTGTTCCGTCGAGCCTGTCATAAATTTGT
ACGTTATGGCAGTTCCGCGGTGTTGGCTCCTCTCTGAGCTCTACCGAAAT
CAGCACCGTCAGGCAAATATGCCTTGATTGTTCGCAGCACATTATCCTTG
ATGGCCAAAACCGGGCCCTATGTCCTCAGTGCAATTGCACCCAGAGCTGT
GTTGTGGTGGGGACCACTGTGCGAGGAAAAATTGAATTATGACATTGCGC
CGTTGGGGAATGGACGTTTGTATGCGTCACTCGCAAGTTTTGTTTTGTTT
TTTTTTCTCTCGTTTGGAGATGAAAAATGGCCCACTCCAGATGCCATTCA
AAAGCTAATGTCACAGAGTCTCGAATCTTCCCCTACTGTGACACGCTCAT
TCTTGGTACCTCATACAAATAGAAAATACATTTTTTTACATTTTTTTCCC
CAAGTATGGAAATCGATAGTTGGGAAGCAAACAGTAAACACTGTGTACCA
AATTTTGTAGGCGCATTGGAGGGCTGATGATGAGATCTTTCATTCAGTAC
AGTTTTCAACTCAGCTGGCCCCCCTTGAGATGAAATCATAACCAAAGCAT
CCCCCACGACAGAGGTAACTTCCTCTACTTGACGATGCCCGGACGAAGCA
TGCCGGGTTTTCGCCTGCCAGGCTGCGTCTCATTATACCGCATATTAGCC
GTTGATCATGAATAAATATTGCGTATCTAGCAACGGGATTCTGCCATGGG
ATTTGGGACATCTAGGTAACCTAATTTTTAACAACCGGCATGATACCCCA
AGTACCGCACGGTACTCTATAACCTTTGCACGCACATATAAAAAACGTTG
CGCTATATACGGTGAACACAAGCGCCATGTGTAATACACGTGGGAGTATA
ATCTGCTCATGTGATCCTAATGGAACCTGATGGGAGCATAGCAATGAGCA
TACTTTCTCAAGGGCATTCCAACTACCAGTTCAATTGACATCCTATAGGG
TGTAGACGTTTTGACCAAGGTCAAGAAGGTGAAAAGGTATACCACCTGAA
CTCCCCCATGCTCTATTAACAGCAGTTTCACAACCGTATACCGCAAGAGC
CAACCTCAAATGCGTTCGCCTGGGTACTCCTACTGTATCTGCGTCAGCCT
CAATATCGCAAGAAGCAGTTGCCAGAGAGTTTCGTGCGGTACCTCCGAGG
CTAAGCACTGAGCGTATAGTTGACAACTGACAGCTTTCTGGTGTTTGCGA
TATCGCAGTAATCTCGAAACCTATCGACCGAGCACGGTCATACAGGCAAT
TATGTAACCCTGCTGATCGGGTGGCCTCCGAATGAAGTGCACGGCTGAGG
GGGGCTTGCGTTTGCGACCACATGTATTGGCTCCTGAAGAAAATAAGCAA
AGTGTACAAAATATTCCAATAACTGCGCGCGTTGCAATACCTTCCCCATA
ATTGAACTGTTACGTTCGCCCGCGCCGCAACTGTCACATTGTCGCTGTGA
TCTACCGTGACCAGTTGCGCGGATACTCAACGGCTCAGTACTCCACGGTG
AGAGTCACTGAGATATACGAAGTGAGGGAGGACGGGACCGAGCGGTGAGT
CACATTACGGTATTGAGGTGGCTTAGGCGTGATGCCTACGCTAATGTCTC
AGGTTCCAAATGCAACAAAACACGGGAGATCGGTCAAAGTGTAGAACATT
ACTGATGGGCGAGAGGCCTCGTTTCTCCGAGTCCAACACCCATCCCCTTG
TCCGACCGTTCGTTTGTCCATGAACCAAAAACGGTTTTGTTTGTATATTC
GTCACAGCATGCAGTCATTGGTAAACCCCATCGGTCTAGAGTCTAAATCT
TGTTTGAGTTTCCACAGGAACGAGACTTAGCTTTCTTGGGTTTCTACATG
AATGGTATTTGTAGACCGGCGGCGTACGTTGTGGACTGCCTCATGTGGAC
ATCTTAGACCCGCGCTCATATTGACTAGAAAGATTAACATAATATAGTGA
CCTACCCGTTGCAGGGCTCAATTCGGTGACTAATGAACATGTTGTATGCG
GCATAGGGTTCTAGTGAGGCCGCACGTCAGAAATCGGGGAAACTGGCGAT
TCGCCTTCTCATTGCTTTTTGGGCTTTAGCTGTGCTCGGGGGCTTACTGT
TGTAGGTGTCTGTGCCAAGAGATACAGCTGGCCCTACTACGAACAATTTC
TGTGTTTGGTACTTGTTCAAGTCCGCTGACTACGCTTGTCTTCCATGATC
TGACGTTCAGTTCAACGCGGGAGGTTCTTTTAGATTGATTGTGCTCACAT
GCACCGGTCTGAACCGGTGTGTTTCTAGATACGTGGCCATGGTGTCCGGT
CCCTTTGCAAGCTGGCCTGCAGCAGGACACGATACCATGGTCACAAGATA
TAACAGGAAAACGGTAGAGTCGATAAAAATGCTATTTGTAGAACAGACCC
GGTGCAGAAACATATACTTTCGCGATCAACGAGCGCAGGATAAATTTGCT
TGGTTGAACTCATGCCGCGTGTGAATTTCCATTCAGGTTCACTTGGTATG
CTCTCCGCGGTTGCCTCCCCATGTAGAAGCACGGCGCTTTTTCTTTTGTC
AAATATTTTCGCACCTGCGCTCGTCGGATGAACGTGCCTCAGATTTGTTG
TCGCAGGTCGTCCGTTGCACCGAGGAGATGTCATATTTGACCGAGTATTT
GGGCGAGTGCTCAAGGAGCCCGTGCAGCACAGCATTCAGGTGACGAACGG
TGTTCATGTAGACACCGATGGTGACCTGCGGTTCGTGAACCATAGTTGCG
CGCCCAACTGCAGAATGGAGGTATCCCCGGCTGCCGGGGGAGAGGTGAGT
TTGATTCCCGCAAGATCTGTAACGGAAGTATCAGGCGGATAAAGGCGCAC
GTGTGCGCTGCGGGGATCCATGATGTGCATAGGTAGTGTACATTAGAACA
TATTGGGACAGTTTTGCACGTGATTTGTAAGTTTTGCAAGAGTGGACAGG
TGAACGAAAAGTTGTCCTCCACGTGTCGTATTTGCACGGGGAAAGTGTTC
ACCGTGATACTATTTGGTACGATTAGGTGAATAAATTGACAATATAAACC
TTCGTCAATCGCCTTGCACTTGAATGCTGAACAAGCGGTATGTATCTTGG
AGCAGCAATGAGTCGTTCTAGTATTCTTTCAGCACGGGCGATATTGTAGC
CGGCGGCAGTTGTCCGTCTACTTGGGCATCTCTCCTGATGTTGGTCGGAA
ACTTAGCTTCTCCGCCCGTGAGCAGTACCACCAGCCCAAGTGATATTTCC
TTGTGGTCTGCATCATACGCCACATATTCCCTTCTTTTTGTCTACAAGCA
CCACATTATTACTCCCTTCTGCGTCCCATCGTGTCCCGTTTGCAAACTCG
CAGGACCCCTTCTTGCGCATCACAGTTGTGGCACCGACAATCGAGCCCGG
GGAAGAACTTACCGTCGATTACAACGCGTTCGAACTCGAGATGGTGAACC
CCTTCGACTGCGTCTGCGGCGTCCCCAGTTGTCGCAAGCGCATCACGGGC
TTTACGCGACTGCCTGTCGCTTTGCGCCGCCAATATCTGGACCATGGTCA
CAACGCTGAACAACCCTCCCTGTTGACTCCTTTCGTGAAAGCATGGGGGG
AAGCCAATCTCGAGACGGCTCCCAGATCGTGAGTTGTGTCGTCGGAACCA
CATAACAGTGAAAACATGCACACCGAGGGGCTGGGCTTGATGTAGGCGCC
ACACCATCAGGATGGTTTTGTTTACAACAAACGGTCGTGTATAGAGTATG
TAGGTTTACTTTGCCAGGAATGATAAAGATAACAGGGCATACCGTAGGCC
AGGAGGCACACATGACGGAGTTATCTACTACGAGCTGAGCCAAAGCAAGA
GACACCCATATTCTTCTACAGACCGAAGCATCACGATCCGTTGTGATGGG
TACCACACACGTGTGGGATTCGCTACACTCCCCGTAGGCACCACGACGCG
CGCCGCGCTCTCTGATCGGCCATTCGGGTGCTTTTTAGTATTTTCGCGTC
GTTTTTCGAAAGTAATCAGCAAAGCGAAGTTCTTTAAAAAAGTTTTAATC
TGCAGCTTGTAGCGTAAATATTTGACGAGATGCCGCCTGCGGGGGTGGTT
ATGTTTCCATGTGAGGAGCTGACGTTTTCAGAGCAATATTCGGTAGGCGT
GCCCTCGGGCGTAGGATCTGTGGGGTCGTTCTGAGTGATTTGTTTTTTTA
ATACTATGTATATCGGGAAGAGAATCTACATGAACGGTTATAATAGGATG
GGCTGGTAGGCCTGCTGCATGATGCAAATATTGAAAAGCTTGTTTTGCCG
TCACGAGGAAGATTCCCATATGTTTCTCTGTGTCTTGTCTTGGGGAGGAA
AACACGGATTTTACGGAATAATAACCCTGGACGGCGAGTAGTCGTGAGGG
TCTAAAAGCATTGTAATCGTTGGTCAGGCACATCGATTGTTGGGTATAGC
TATGGAACGGGACATGTGCCCGTGGATGTTGCCCGTTTGAGTGTGGTTTC
GTTGGATACGGGGTCAAACCAGCTGATTGTTCAAGGCATCGGTGTCACTT
CGGGGGGGTGTGAGGGGGTGACCATAAAAAAATAAGAATCGGAACCCTCC
CAATTTTGAAGGAAAAAAGTGAGGAGAGTAGAATGGGAGTTGGGGATTGA
GGACTGGCGAAAGGGGGATTCCCGGTCACACTTTACTAAAATTAAGTCAT
GTAGTGGAGGACGACCCTTTGCTGAGAGTATGGTATCACACTAATATCAA
TTCATTTATCATAAAACAATCTTGTCAGTCTCCACCGCTTGGGATATACC
CCCTCTGGCAACACAAAGCTGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5053:1210..11381+ >mRNA_H-paniculata_contig5053.12318.1 ID=mRNA_H-paniculata_contig5053.12318.1|Name=mRNA_H-paniculata_contig5053.12318.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1794bp|location=Sequence derived from alignment at H-paniculata_contig5053:1210..11381+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTCTCCTGTCGAGTAAAAATGCGTGTGCAAAATTGCCTATACGAGC
ACGAAACGCAGTTCAATGTGAATTGGGACGGCGCGGGATGCGGCTGCACA
GTCCCACCATGCTGCAGGCAAAGAATTGCGAATATTCTCCCATCAAAGAT
ATCGACTGTGGCAGTGGGCTTACCCGTGTTCTACCTCATTCGTCCGTGGG
GCCTTCCTTCAAGGGTGCCATGCATGCGTCTTGCTCCGCCCCAGTATGGC
AGACGACAGATATTTTCACAAGGAGCCAAGACAAGCCGCCCGGACTGCTG
CTTGCAGCTTGCGATCGGATGCGAGCTCCTAGACAGATGAGTCTCCTGTC
GAGTAAAAATGCGTGTGCAAAATTGCCTATACGAGCACGAAACGCAGTTC
AATGTGAATTGGGACGGCGCGGGATGCGGCTGCACAGTCCCACCATGCTG
CAGGCAAAGAATTGCGAATATTCTCCCATCAAAGATATCGACTGTGGCAG
TGGGCTTACCCGTGTTCTACCTCATTCGTCCGTGGGGCCTTCCTTCAAGG
GTGCCATGCATGCGTCTTGCTCCGCCCCAGTATGGCAGACGACAGATATT
TTCACAAGGAGCCAAGACAAGCCGCCCGGACTGCTGCTTGCAGCTTGCGA
TCGGATGCGAGCTCCTAGACAGTTGCGCGGATACTCAACGGCTCAGTACT
CCACGGTGAGAGTCACTGAGATATACGAAGTGAGGGAGGACGGGACCGAG
CGTTGCGCGGATACTCAACGGCTCAGTACTCCACGGTGAGAGTCACTGAG
ATATACGAAGTGAGGGAGGACGGGACCGAGCGATTTGTTGTCGCAGGTCG
TCCGTTGCACCGAGGAGATGTCATATTTGACCGAGTATTTGGGCGAGTGC
TCAAGGAGCCCGTGCAGCACAGCATTCAGGTGACGAACGGTGTTCATGTA
GACACCGATGGTGACCTGCGGTTCGTGAACCATAGTTGCGCGCCCAACTG
CAGAATGGAGGTATCCCCGGCTGCCGGGGGAGAGATTTGTTGTCGCAGGT
CGTCCGTTGCACCGAGGAGATGTCATATTTGACCGAGTATTTGGGCGAGT
GCTCAAGGAGCCCGTGCAGCACAGCATTCAGGTGACGAACGGTGTTCATG
TAGACACCGATGGTGACCTGCGGTTCGTGAACCATAGTTGCGCGCCCAAC
TGCAGAATGGAGGTATCCCCGGCTGCCGGGGGAGAGGACCCCTTCTTGCG
CATCACAGTTGTGGCACCGACAATCGAGCCCGGGGAAGAACTTACCGTCG
ATTACAACGCGTTCGAACTCGAGATGGTGAACCCCTTCGACTGCGTCTGC
GGCGTCCCCAGTTGTCGCAAGCGCATCACGGGCTTTACGCGACTGCCTGT
CGCTTTGCGCCGCCAATATCTGGACCATGGTCACAACGCTGAACAACCCT
CCCTGTTGACTCCTTTCGTGAAAGCATGGGGGGAAGCCAATCTCGAGACG
GCTCCCAGATCGTGAGACCCCTTCTTGCGCATCACAGTTGTGGCACCGAC
AATCGAGCCCGGGGAAGAACTTACCGTCGATTACAACGCGTTCGAACTCG
AGATGGTGAACCCCTTCGACTGCGTCTGCGGCGTCCCCAGTTGTCGCAAG
CGCATCACGGGCTTTACGCGACTGCCTGTCGCTTTGCGCCGCCAATATCT
GGACCATGGTCACAACGCTGAACAACCCTCCCTGTTGACTCCTTTCGTGA
AAGCATGGGGGGAAGCCAATCTCGAGACGGCTCCCAGATCGTGA back to top
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