mRNA_H-paniculata_contig4999.12214.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4999.12214.1 vs. uniprot
Match: D7FII7_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII7_ECTSI) HSP 1 Score: 115 bits (287), Expect = 1.820e-29 Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 1
Query: 13 KTVVIVDTSNEIAGDGAIPHREAIGESRRLMVANKDHQHRVMIEALQNHTPQTIVVDEISNSLEAKACMDIKAR 234
+TVVIVDTSNEIAGDG IPH AIG+SRR+MV +K QH VM EALQNHTPQTIVVDE+SN EA+AC+DIKAR
Sbjct: 101 QTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKAR 174
BLAST of mRNA_H-paniculata_contig4999.12214.1 vs. uniprot
Match: A0A6H5L2P2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P2_9PHAE) HSP 1 Score: 114 bits (285), Expect = 8.430e-28 Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 1
Query: 13 KTVVIVDTSNEIAGDGAIPHREAIGESRRLMVANKDHQHRVMIEALQNHTPQTIVVDEISNSLEAKACMDIKAR 234
+TVVIVDTSNEIAGDG IPH AIG+SRR+MV NK QH VM EALQNHTPQTIVVDE+S+ EA+AC+DIKAR
Sbjct: 680 QTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKAGQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKAR 753
BLAST of mRNA_H-paniculata_contig4999.12214.1 vs. uniprot
Match: A0A0A9H0K5_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9H0K5_ARUDO) HSP 1 Score: 94.0 bits (232), Expect = 2.590e-23 Identity = 47/77 (61.04%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 4 HYTKTVVIVDTSNEIAGDGAIPHREAIGESRRLMVANKDHQHRVMIEALQNHTPQTIVVDEISNSLEAKACMDIKAR 234
HY K V+IVDTSNEI GDG IPH IG +RRL V N+D QH+V+IEA++NH PQ IV+DEI LEA A I R
Sbjct: 5 HYNKRVMIVDTSNEIGGDGDIPH-PGIGNARRLQVPNQDMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQR 80
BLAST of mRNA_H-paniculata_contig4999.12214.1 vs. uniprot
Match: X1PHJ1_9ZZZZ (AAA domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1PHJ1_9ZZZZ) HSP 1 Score: 87.0 bits (214), Expect = 1.910e-20 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 1
Query: 7 YTKTVVIVDTSNEIAGDGAIPHREAIGESRRLMVANKDHQHRVMIEALQNHTPQTIVVDEISNSLEAKACMDIKAR 234
+ K V+++DTSNEIAGDG IPH +IG +RR+ V D QH VMIEA++NH P+ I++DEI LEA+A I R
Sbjct: 37 FQKRVIVIDTSNEIAGDGDIPH-PSIGHARRMQVVTPDKQHAVMIEAVENHMPEVIIIDEIGTELEAQAARTIAER 111
BLAST of mRNA_H-paniculata_contig4999.12214.1 vs. uniprot
Match: UPI001D13F098 (AAA family ATPase n=2 Tax=Leptolyngbya ectocarpi TaxID=1202 RepID=UPI001D13F098) HSP 1 Score: 90.5 bits (223), Expect = 2.850e-20 Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 13 KTVVIVDTSNEIAGDGAIPHREAIGESRRLMVANKDHQHRVMIEALQNHTPQTIVVDEISNSLEAKACMDIKAR 234
K VVI+DTSNEIAGDG IPH AIG +RR+ VA + QH+VMIEA++NHTP+ IV+DEI LEA A I R
Sbjct: 174 KRVVIIDTSNEIAGDGDIPH-PAIGRARRMQVARPEQQHQVMIEAVENHTPEVIVIDEIGTELEALAARTIAER 246
BLAST of mRNA_H-paniculata_contig4999.12214.1 vs. uniprot
Match: A0A8B8NSC8_9MYRT (uncharacterized protein ycf45 n=2 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8NSC8_9MYRT) HSP 1 Score: 92.8 bits (229), Expect = 2.990e-20 Identity = 47/76 (61.84%), Postives = 55/76 (72.37%), Query Frame = 1
Query: 7 YTKTVVIVDTSNEIAGDGAIPHREAIGESRRLMVANKDHQHRVMIEALQNHTPQTIVVDEISNSLEAKACMDIKAR 234
Y K V+IVDTSNEI GDG IPH E IG +RR+ V N D QH+V+IEA++NH PQ IV+DEIS LEA A I R
Sbjct: 221 YGKRVMIVDTSNEIGGDGDIPH-EGIGNARRMQVPNSDMQHKVLIEAVENHMPQVIVIDEISTKLEAMAASTIAQR 295
BLAST of mRNA_H-paniculata_contig4999.12214.1 vs. uniprot
Match: F4Y2N6_9CYAN (R3H domain-containing protein n=29 Tax=Moorena TaxID=1155738 RepID=F4Y2N6_9CYAN) HSP 1 Score: 92.8 bits (229), Expect = 3.070e-20 Identity = 46/74 (62.16%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 13 KTVVIVDTSNEIAGDGAIPHREAIGESRRLMVANKDHQHRVMIEALQNHTPQTIVVDEISNSLEAKACMDIKAR 234
K VVI+DTSNEIAGDG IPH AIG +RR+ VA+ +HQH+VMIEA++NH P+ IV+DEI LEA+A I R
Sbjct: 223 KRVVIIDTSNEIAGDGDIPH-PAIGRARRMQVASPEHQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAER 295
BLAST of mRNA_H-paniculata_contig4999.12214.1 vs. uniprot
Match: A0A6G1CZP6_9ORYZ (AAA domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1CZP6_9ORYZ) HSP 1 Score: 89.7 bits (221), Expect = 3.470e-20 Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 1
Query: 7 YTKTVVIVDTSNEIAGDGAIPHREAIGESRRLMVANKDHQHRVMIEALQNHTPQTIVVDEISNSLEAKACMDIKAR 234
+ K VV+VDTSNEI GDG IPH AIG +RR+ VA QHRVMIEA++NH P+ ++VDEI EA+AC I R
Sbjct: 55 FQKRVVVVDTSNEIGGDGDIPHA-AIGGARRMQVAEPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAER 129
BLAST of mRNA_H-paniculata_contig4999.12214.1 vs. uniprot
Match: A0A0A8ZXC3_ARUDO (Uncharacterized protein n=2 Tax=Arundo donax TaxID=35708 RepID=A0A0A8ZXC3_ARUDO) HSP 1 Score: 90.1 bits (222), Expect = 3.630e-20 Identity = 46/76 (60.53%), Postives = 54/76 (71.05%), Query Frame = 1
Query: 7 YTKTVVIVDTSNEIAGDGAIPHREAIGESRRLMVANKDHQHRVMIEALQNHTPQTIVVDEISNSLEAKACMDIKAR 234
Y K V+IVDTSNEI GDG IPH IG +RRL V N+D QH+V+IEA++NH PQ IV+DEI LEA A I R
Sbjct: 6 YKKRVMIVDTSNEIGGDGDIPH-PGIGNARRLQVPNQDIQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQR 80
BLAST of mRNA_H-paniculata_contig4999.12214.1 vs. uniprot
Match: A0A1F4TW81_9BACT (R3H domain-containing protein n=1 Tax=candidate division WOR-1 bacterium RIFOXYB2_FULL_48_7 TaxID=1802583 RepID=A0A1F4TW81_9BACT) HSP 1 Score: 92.4 bits (228), Expect = 3.730e-20 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1
Query: 7 YTKTVVIVDTSNEIAGDGAIPHREAIGESRRLMVANKDHQHRVMIEALQNHTPQTIVVDEISNSLEAKACMDIKAR 234
+++ V++VDTSNEIAGDG IPH AIG++RR+ V + +HQH+VMIEA++NH P+ I+VDEI EA AC I R
Sbjct: 152 FSRRVIVVDTSNEIAGDGDIPH-PAIGKARRMQVPSPEHQHKVMIEAVENHMPEVIIVDEIGTEAEALACRTIAER 226 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4999.12214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4999.12214.1 >prot_H-paniculata_contig4999.12214.1 ID=prot_H-paniculata_contig4999.12214.1|Name=mRNA_H-paniculata_contig4999.12214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp MHYTKTVVIVDTSNEIAGDGAIPHREAIGESRRLMVANKDHQHRVMIEALback to top mRNA from alignment at H-paniculata_contig4999:8000..8524+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4999.12214.1 ID=mRNA_H-paniculata_contig4999.12214.1|Name=mRNA_H-paniculata_contig4999.12214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=525bp|location=Sequence derived from alignment at H-paniculata_contig4999:8000..8524+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4999:8000..8524+ >mRNA_H-paniculata_contig4999.12214.1 ID=mRNA_H-paniculata_contig4999.12214.1|Name=mRNA_H-paniculata_contig4999.12214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=474bp|location=Sequence derived from alignment at H-paniculata_contig4999:8000..8524+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |