mRNA_H-paniculata_contig4896.12051.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig4896.12051.1 vs. uniprot
Match: D7G6A6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A6_ECTSI) HSP 1 Score: 684 bits (1765), Expect = 5.220e-247 Identity = 331/377 (87.80%), Postives = 359/377 (95.23%), Query Frame = 1
Query: 19 KSVNKPNEPSSAVLRFTGSKHFRQRVVCSLLSRRAIRIDNIRPFPTSTDLQTDIHMGLMEHEAAFLRLVDKLTNGTKVEINETGTTLRFKPGYVTGGKATHDCGTTRSLGWFLEALMPLALFSKNPFNLVLSGITNDNVDLSVDALKAVTLPLLKQFGAGEDGGLELKVKRRGAPPGGGGIVEFRCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWIHTDHNSGRTGGESPGFALSLVAESTTGVMLVAETAAEKGTLPEDLGNLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGTYFRLKPDPQTSTVLVSCKGIGFKNLSRGAT 1149
K ++PNEP +AVLR+ GSKHFRQRVVCS+LS RAIRID+IRPFPT+TD Q ++ MG+M HEAAFLRLVDKLTNGT+VEINETGTTLRFKPGYVTGG+ +HDCGT+RSLGWF+E L+PLALFSK PFNL LSGITND+VDLSVDALKAVTLPLLK FG E+GGLELKVKRRGAPPGGGG+VEFRCPIVRELKPIDFT+PGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVW+HTDH++GRTGGESPGFALSLVAESTTGV+LVAETAA+KGTLPEDLGN GSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLT+YS+TYLRHLRDFFG YFRLKPDPQTSTVLVSC+GIGFKNLSRGAT
Sbjct: 24 KRSSQPNEPGAAVLRYKGSKHFRQRVVCSVLSGRAIRIDDIRPFPTTTDYQEEVQMGIMGHEAAFLRLVDKLTNGTQVEINETGTTLRFKPGYVTGGRESHDCGTSRSLGWFIEGLLPLALFSKTPFNLTLSGITNDDVDLSVDALKAVTLPLLKHFGVAEEGGLELKVKRRGAPPGGGGLVEFRCPIVRELKPIDFTEPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWVHTDHHAGRTGGESPGFALSLVAESTTGVLLVAETAADKGTLPEDLGNFGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTRYSVTYLRHLRDFFGAYFRLKPDPQTSTVLVSCQGIGFKNLSRGAT 400
BLAST of mRNA_H-paniculata_contig4896.12051.1 vs. uniprot
Match: A0A835YR39_9STRA (RNA 3'-terminal phosphate cyclase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR39_9STRA) HSP 1 Score: 543 bits (1400), Expect = 1.330e-191 Identity = 260/378 (68.78%), Postives = 316/378 (83.60%), Query Frame = 1
Query: 19 KSVNKPNEPSSAVLRFTGSKHFRQRVVCSLLSRRAIRIDNIRPFPTST-DLQTDIHMGLMEHEAAFLRLVDKLTNGTKVEINETGTTLRFKPGYVTGGKATHDCGTTRSLGWFLEALMPLALFSKNPFNLVLSGITNDNVDLSVDALKAVTLPLLKQFGAGEDGGLELKVKRRGAPPGGGGIVEFRCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWIHTDHNSGRTGGESPGFALSLVAESTTGVMLVAETAAEKGTLPEDLGNLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGTYFRLKPDPQTSTVLVSCKGIGFKNLSRGAT 1149
K ++ S VLRF G HFRQRVVC++LS + IRID+IRP P L +I +GL+++EA+FLRL+DKLTNGTK+EINETGT+L KPG+VT G+ HDCGT+R +GWF+E ++PLALFSK P +L L+GITNDN DLSVDA++AVTLPLLK+FG ++GGL+LKVK RG PP GGG VEF CPIVR+L P+D TD GLIKR+RGNA C KVSPQ+ANRVAES++G+LNRLLPDVW+HTDH++G GG SPGFA SLVAESTTGV+L+AETAAE+G LPEDLG +L+L+EI NGGCVDS+HQSLAMLLMVLCPEDVSRLR+GKLT YS+ YLRHLRDFFGT F++KPD +TS+V++SC G G+KNLSR AT
Sbjct: 13 KKSDRSTSKDSNVLRFKGCTHFRQRVVCAILSGKPIRIDSIRPSPLEAGSLNDNIEIGLVDYEASFLRLIDKLTNGTKIEINETGTSLFLKPGFVTSGRQEHDCGTSRCIGWFIEGVLPLALFSKRPLHLTLNGITNDNSDLSVDAMRAVTLPLLKRFGVADEGGLDLKVKCRGFPPLGGGSVEFTCPIVRQLTPVDMTDAGLIKRVRGNAACAKVSPQLANRVAESAKGVLNRLLPDVWVHTDHSAGANGGLSPGFACSLVAESTTGVLLMAETAAEQGMLPEDLGVTAGELLLDEISNGGCVDSTHQSLAMLLMVLCPEDVSRLRVGKLTAYSVQYLRHLRDFFGTVFKIKPDLETSSVMLSCLGTGYKNLSRSAT 390
BLAST of mRNA_H-paniculata_contig4896.12051.1 vs. uniprot
Match: A0A024U3U9_9STRA (18S rRNA biogenesis protein RCL1 n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U3U9_9STRA) HSP 1 Score: 445 bits (1144), Expect = 7.530e-153 Identity = 220/368 (59.78%), Postives = 275/368 (74.73%), Query Frame = 1
Query: 46 SSAVLRFTGSKHFRQRVVCSLLSRRAIRIDNIRPFPTSTDLQTDIHMGLMEHEAAFLRLVDKLTNGTKVEINETGTTLRFKPGYVTGGKATHDCGTTRSLGWFLEALMPLALFSKNPFNLVLSGITNDNVDLSVDALKAVTLPLLKQFGAGEDGGLELKVKRRGAPPGGGGIVEFRCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWIHTDHNSGRTGGESPGFALSLVAESTTGVMLVAETAAEKGTLPEDLGNLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGTYFRLKPDPQTSTVLVSCKGIGFKNLSRGAT 1149
S L+F G HFRQR++C+ LS R IRIDNIR G+ E EA FLRL+D +TNG+++EINETGT L++ PG++ GG HDCGT RS+GWFLEAL+ LA F+K P L GITND+VD SVD KAVT+PLLK FG E GL+ KVK+RGAPP GGG V FRCP VR+LK + + G IKRIRG AYCT+VSPQ +NR+ ++SRGL N+LLPDV+I++DH G G SPG+ALSLVAE+TTGV+L AETAA G+LPED+ ++ S L+ EEI+ GGCVD+S+Q LA+LLM L PEDVS++R GKLT YS+ YLRHLRDFFG F++K D ++ +VL+SC GIGFKNLS+ T
Sbjct: 23 SGGTLKFKGCAHFRQRLICATLSGRRIRIDNIRGDSEEP--------GISEFEANFLRLLDSITNGSQIEINETGTVLKYAPGFIVGGTIDHDCGTKRSIGWFLEALVALAPFAKRPLVATLKGITNDDVDASVDYFKAVTIPLLKHFGLDE--GLDFKVKKRGAPPLGGGEVLFRCPTVRQLKSVHLVEEGFIKRIRGVAYCTRVSPQTSNRIVDTSRGLFNKLLPDVYIYSDHYRGTDSGLSPGYALSLVAETTTGVLLGAETAATSGSLPEDVASMASHLLCEEIQRGGCVDTSNQCLALLLMTLSPEDVSKIRFGKLTPYSMQYLRHLRDFFGVTFKIKADHESKSVLLSCLGIGFKNLSKKVT 380
BLAST of mRNA_H-paniculata_contig4896.12051.1 vs. uniprot
Match: K3WKI0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKI0_GLOUD) HSP 1 Score: 441 bits (1133), Expect = 2.760e-151 Identity = 218/373 (58.45%), Postives = 270/373 (72.39%), Query Frame = 1
Query: 31 KPNEPSSAVLRFTGSKHFRQRVVCSLLSRRAIRIDNIRPFPTSTDLQTDIHMGLMEHEAAFLRLVDKLTNGTKVEINETGTTLRFKPGYVTGGKATHDCGTTRSLGWFLEALMPLALFSKNPFNLVLSGITNDNVDLSVDALKAVTLPLLKQFGAGEDGGLELKVKRRGAPPGGGGIVEFRCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWIHTDHNSGRTGGESPGFALSLVAESTTGVMLVAETAAEKGTLPEDLGNLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGTYFRLKPDPQTSTVLVSCKGIGFKNLSRGAT 1149
K ++ VLR G HFRQR+VC+ LS R I I+ IR D GL + EA FLRL+D++TNG+ +EINETGT L++ PG++ GG+ HDCG RS+GWFLEA+ LA F K P LVL GITNDNVD+SVDA K TLPL+K FG E GL+ KVK+RGAPP GGG V F CP+VR+L+ I + G IKRIRG AY T+VSPQ +NR+ E+SRGL N+LLPDV+I++DH G G+SPGFALSLVAE+TTG+ L AE AA G LPED+ +L S L+ EEI GGCVD+++Q+L +L M L PEDVS++R GKLT Y+I YLRHLRDFFG F++KPDP T TV +SC G GFKNLS+ T
Sbjct: 11 KKSQRQGTVLRMQGCSHFRQRLVCATLSGRPICIEEIR--------SEDEEPGLTDFEANFLRLLDRITNGSHIEINETGTKLKYSPGFIVGGRIEHDCGVKRSIGWFLEAVAALAPFGKQPLQLVLRGITNDNVDISVDAFKTTTLPLMKHFGIDE--GLDFKVKKRGAPPLGGGEVLFSCPLVRQLRSIHLIEEGFIKRIRGVAYSTRVSPQTSNRIVETSRGLFNKLLPDVYIYSDHYKGAESGQSPGFALSLVAETTTGIFLGAEAAATGGNLPEDVASLASSLLCEEISKGGCVDTTNQALVLLYMALSPEDVSKVRFGKLTPYTIQYLRHLRDFFGITFKIKPDPATKTVFLSCLGTGFKNLSKKVT 373
BLAST of mRNA_H-paniculata_contig4896.12051.1 vs. uniprot
Match: A0A2D4BYI5_PYTIN (RNA 3'-terminal phosphate cyclase, putative n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BYI5_PYTIN) HSP 1 Score: 438 bits (1127), Expect = 2.100e-150 Identity = 219/379 (57.78%), Postives = 272/379 (71.77%), Query Frame = 1
Query: 13 GVKSVNKPNEPSSAVLRFTGSKHFRQRVVCSLLSRRAIRIDNIRPFPTSTDLQTDIHMGLMEHEAAFLRLVDKLTNGTKVEINETGTTLRFKPGYVTGGKATHDCGTTRSLGWFLEALMPLALFSKNPFNLVLSGITNDNVDLSVDALKAVTLPLLKQFGAGEDGGLELKVKRRGAPPGGGGIVEFRCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWIHTDHNSGRTGGESPGFALSLVAESTTGVMLVAETAAEKGTLPEDLGNLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGTYFRLKPDPQTSTVLVSCKGIGFKNLSRGAT 1149
GV + + VLR G HFRQR+VC+ LS R I I+ IR D GL E EA FLRL+DKLTNG+ +EINETGT L++ PG++ GG+ HDCGT R++GWFLEA+ LA F P +L L GITNDNVD+SVDA K TLPL+K FG E GL+ KVK+RGAPP GGG V F CPIVR+L+ I + G IKRIRG AY T+VSPQ +NR+ ++SRG+ N+LLPDV+I++DH G G+SPGFALSLVAE+TTGV L AE AA G LPED+ L S L+ EEIK GGCVD+++Q+L +L M L PEDVS++R GKLT Y+I +LRHLRDFFG F++KPDP+T T+ +SC G GFKNLS+ T
Sbjct: 3 GVTKKAASTQRAGTVLRMQGCTHFRQRIVCATLSGRPICIEEIR--------SEDEEPGLTEFEANFLRLMDKLTNGSHIEINETGTKLKYSPGFIVGGRIEHDCGTKRAIGWFLEAVAALAPFGXLPLHLTLRGITNDNVDMSVDAFKTTTLPLMKHFGIDE--GLDFKVKKRGAPPLGGGEVIFSCPIVRQLQSIHLIEEGFIKRIRGIAYSTRVSPQTSNRIVDASRGIFNKLLPDVYIYSDHYKGAESGQSPGFALSLVAETTTGVFLGAEAAATGGNLPEDVATLASHLLCEEIKKGGCVDTTNQALVLLYMTLSPEDVSKVRFGKLTPYTIQFLRHLRDFFGITFKIKPDPETKTIYLSCLGTGFKNLSKKVT 371
BLAST of mRNA_H-paniculata_contig4896.12051.1 vs. uniprot
Match: A0A5D6Y6F9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6F9_9STRA) HSP 1 Score: 434 bits (1115), Expect = 1.490e-148 Identity = 215/364 (59.07%), Postives = 265/364 (72.80%), Query Frame = 1
Query: 58 LRFTGSKHFRQRVVCSLLSRRAIRIDNIRPFPTSTDLQTDIHMGLMEHEAAFLRLVDKLTNGTKVEINETGTTLRFKPGYVTGGKATHDCGTTRSLGWFLEALMPLALFSKNPFNLVLSGITNDNVDLSVDALKAVTLPLLKQFGAGEDGGLELKVKRRGAPPGGGGIVEFRCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWIHTDHNSGRTGGESPGFALSLVAESTTGVMLVAETAAEKGTLPEDLGNLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGTYFRLKPDPQTSTVLVSCKGIGFKNLSRGAT 1149
LR G HFRQR+VC+ LS R + I+ IR D GL + EA FLRL+D+LTNG+ +E+NETGT L++ PG++ GG+ HDCGT R++GWFLE L LA F K P VL G+TNDNVD SVDA KA TLPLLK FG E GL+ K+K+RGAPP GGG V F CP+VREL+ I + G IKRIRG AY T+VSPQ +NR+ E+SRGL N+LLPDV+I++DH G G+SPGFALSLVAE+TTGV L AE AA G LPED+ +L S L+ EEI GGCVD+++Q+L +L M L PEDVS++R GKLT Y+I +LRHLRDFFG F++KPDP T TV +SC G GFKNLS+ T
Sbjct: 20 LRLRGCAHFRQRLVCATLSGRQVVIEGIRA--------EDEAPGLTDFEANFLRLLDRLTNGSHIEVNETGTKLKYSPGFIVGGRVEHDCGTGRAIGWFLEPLAALAPFGKLPLRAVLRGVTNDNVDTSVDAFKATTLPLLKHFGLDE--GLDFKIKKRGAPPLGGGEVVFTCPLVRELRSIHLIEEGFIKRIRGVAYSTRVSPQTSNRIVETSRGLFNKLLPDVYIYSDHYKGAESGQSPGFALSLVAETTTGVFLGAEAAAAGGNLPEDVASLASSLLCEEISKGGCVDTANQALVLLFMALSPEDVSKVRFGKLTPYTIQHLRHLRDFFGITFKIKPDPATKTVFLSCLGTGFKNLSKKVT 373
BLAST of mRNA_H-paniculata_contig4896.12051.1 vs. uniprot
Match: A0A662WTB3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTB3_9STRA) HSP 1 Score: 428 bits (1101), Expect = 1.850e-146 Identity = 215/374 (57.49%), Postives = 268/374 (71.66%), Query Frame = 1
Query: 28 NKPNEPSSAVLRFTGSKHFRQRVVCSLLSRRAIRIDNIRPFPTSTDLQTDIHMGLMEHEAAFLRLVDKLTNGTKVEINETGTTLRFKPGYVTGGKATHDCGTTRSLGWFLEALMPLALFSKNPFNLVLSGITNDNVDLSVDALKAVTLPLLKQFGAGEDGGLELKVKRRGAPPGGGGIVEFRCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWIHTDHNSGRTGGESPGFALSLVAESTTGVMLVAETAAEKGTLPEDLGNLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGTYFRLKPDPQTSTVLVSCKGIGFKNLSRGAT 1149
N+ + + VL+ G HFRQR+VC+ LS R + I+ IR D GL EA LRL+D+LTNG+ +EINETGT L++ PG+V GG+ HDCG RS+GWFLE + LA F+K P ++ L GITNDN D SVDA KA TLPL++ FG E GL+LKVK+RGAPP GGG V F CP VR+L+ I + G IKRIRG AY T+VSPQ +NR+ E+SRGL N+LLPDV+I++DH G G+SPGFALSLVAE+TTGV L AE AA G LPED+ L S ++ EEI GGCVD+S+Q+L +L M L PEDVS++R GKLT YSI LRHLRDFFG F++KPDP+T TVL+SC G GFKNL++ T
Sbjct: 8 NQKPKRNGGVLKLQGCAHFRQRLVCATLSGRPVIIEEIR--------SEDDEPGLAAFEANLLRLLDRLTNGSHIEINETGTKLKYSPGFVVGGRIEHDCGVARSIGWFLEVIAALAPFAKLPLHVTLRGITNDNEDASVDAFKATTLPLMRHFGIDE--GLDLKVKKRGAPPLGGGEVVFSCPQVRQLRSIHLVEEGFIKRIRGVAYSTRVSPQTSNRIVETSRGLFNKLLPDVYIYSDHYKGAESGQSPGFALSLVAETTTGVFLGAEAAAAGGNLPEDVATLASHMLCEEISKGGCVDTSNQALVLLYMALSPEDVSKVRFGKLTPYSIQCLRHLRDFFGITFKIKPDPETKTVLLSCLGTGFKNLAKKVT 371
BLAST of mRNA_H-paniculata_contig4896.12051.1 vs. uniprot
Match: A0A067BV36_SAPPC (18S rRNA biogenesis protein RCL1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BV36_SAPPC) HSP 1 Score: 425 bits (1093), Expect = 3.610e-145 Identity = 209/361 (57.89%), Postives = 268/361 (74.24%), Query Frame = 1
Query: 46 SSAVLRFTGSKHFRQRVVCSLLSRRAIRIDNIRPFPTSTDLQTDIHMGLMEHEAAFLRLVDKLTNGTKVEINETGTTLRFKPGYVTGGKATHDCGTTRSLGWFLEALMPLALFSKNPFNLVLSGITNDNVDLSVDALKAVTLPLLKQFGAGEDGGLELKVKRRGAPPGGGGIVEFRCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWIHTDHNSGRTGGESPGFALSLVAESTTGVMLVAETAAEKGTLPEDLGNLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGTYFRLKPDPQTSTVLVSCKGIGFK 1128
S L+F G HFRQR+VC+ LS R I I NIR ++D G+ E EA FLRL+D LTNG+++EINETGT+L++ PG++ GG HDCGT R++GWFLE L+ LA F+K P L GITND+VD+SVD+ KA+TLPL+K FG E GL+ KVK+RGAPP GGG V FRCPIVR+L+ + D G IKRIRG AYCT+VSPQ ANR+ ++ RG+ N+LLPDV+I++DH G G SPGF LSLVAE+TTG++L AE AA G+LPED+ S L+ EEI+ GGCVD+++Q L +LLM L PEDVS++R GKLT +SI +LRHLRDFFG F++K + +T TVL+SC G+GFK
Sbjct: 20 SGGTLKFQGCAHFRQRLVCATLSGRRILIQNIRA-------ESD-EPGITEFEANFLRLLDNLTNGSQIEINETGTSLKYTPGFIVGGTIDHDCGTKRAIGWFLEPLVALAPFAKKPLVATLRGITNDDVDVSVDSFKAITLPLIKHFGLDE--GLDFKVKKRGAPPLGGGEVIFRCPIVRQLRSVHLVDDGFIKRIRGVAYCTRVSPQTANRIVDTGRGIFNKLLPDVYIYSDHYKGAESGLSPGFGLSLVAETTTGIVLGAEAAATSGSLPEDVAKTASHLLCEEIQKGGCVDTTNQCLTLLLMTLSPEDVSKVRFGKLTPHSIQFLRHLRDFFGVTFKIKAENETKTVLLSCLGLGFK 370
BLAST of mRNA_H-paniculata_contig4896.12051.1 vs. uniprot
Match: M4B9B6_HYAAE (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4B9B6_HYAAE) HSP 1 Score: 425 bits (1092), Expect = 3.620e-145 Identity = 211/367 (57.49%), Postives = 271/367 (73.84%), Query Frame = 1
Query: 49 SAVLRFTGSKHFRQRVVCSLLSRRAIRIDNIRPFPTSTDLQTDIHMGLMEHEAAFLRLVDKLTNGTKVEINETGTTLRFKPGYVTGGKATHDCGTTRSLGWFLEALMPLALFSKNPFNLVLSGITNDNVDLSVDALKAVTLPLLKQFGAGEDGGLELKVKRRGAPPGGGGIVEFRCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWIHTDHNSGRTGGESPGFALSLVAESTTGVMLVAETAAEKGTLPEDLGNLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGTYFRLKPDPQTSTVLVSCKGIGFKNLSRGAT 1149
S +LRF G HFRQR+VC+ LS R + I++IR D + GL EA+ LRL+D++T+G+ +EINETGT L+F+PG V GG+ HDCGT R++GWFLE L LA F+K P ++ L GITND+VD S+D KA TLPLL+ FG E GL+L VK+RGAPP GGG V FRCP VREL+ + D G IKR+RG AY T+VSPQ +NR+ E+SRGL N+LLPDV+I++DH G G+SPGFALSLVAE+TTG+ L AE+AAE G LPE + S + EEI GGCVDSS+Q+L ++LM L PEDV+++R GKLT +SI LRHLR+FFG F++KPDP+T TVL+SC G+GFKNL++ T
Sbjct: 10 SGLLRFQGCAHFRQRLVCAALSGRPLIIEDIR--------SEDENPGLAPFEASLLRLLDRVTSGSHLEINETGTKLKFQPGVVLGGRFVHDCGTGRAIGWFLEVLAALAPFAKLPLHVTLDGITNDHVDTSIDTFKATTLPLLRHFGLDE--GLDLVVKKRGAPPLGGGQVIFRCPQVRELRAVHLVDEGFIKRVRGVAYSTRVSPQTSNRIVETSRGLFNKLLPDVYIYSDHYKGAESGQSPGFALSLVAETTTGIFLGAESAAEPGDLPEGVATRASHALCEEISRGGCVDSSNQALVLMLMTLGPEDVAKVRFGKLTPHSIECLRHLREFFGITFKIKPDPETKTVLLSCLGVGFKNLAKKVT 366
BLAST of mRNA_H-paniculata_contig4896.12051.1 vs. uniprot
Match: A0A0N7L387_PLAHL (18s rrna biogenesis protein rcl1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L387_PLAHL) HSP 1 Score: 422 bits (1086), Expect = 2.840e-144 Identity = 210/365 (57.53%), Postives = 271/365 (74.25%), Query Frame = 1
Query: 55 VLRFTGSKHFRQRVVCSLLSRRAIRIDNIRPFPTSTDLQTDIHMGLMEHEAAFLRLVDKLTNGTKVEINETGTTLRFKPGYVTGGKATHDCGTTRSLGWFLEALMPLALFSKNPFNLVLSGITNDNVDLSVDALKAVTLPLLKQFGAGEDGGLELKVKRRGAPPGGGGIVEFRCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWIHTDHNSGRTGGESPGFALSLVAESTTGVMLVAETAAEKGTLPEDLGNLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGTYFRLKPDPQTSTVLVSCKGIGFKNLSRGAT 1149
VLRF G HFRQR++C++LS R + I+NIR D + GL EA LRL+D++T+G+++EINETGT L+ +PG V GG+ THDCGT R++GWFLE L LA F+K P + L G+TND++D SVD KA TLPLL+ FG D GL+ VK+RGA P GGG V FRCP++R+LK I T+ G IKRIRG AY T+VSPQ +NR+ ESSRGL N+LLPDV+I++DH G G SPGFALSLVAE+TTGV L +E AAE G LPED+ S + EEI+ GGCVDS++Q++ +LLM L PEDV+++RIGKLT +SI+ LR LR+FFG F++KPDP+T TVL+SC G+GFKNL++ T
Sbjct: 11 VLRFQGCAHFRQRLICAILSGRPLIIENIR--------SEDENPGLAAFEANLLRLLDRITSGSRLEINETGTKLKLQPGLVLGGQITHDCGTGRAIGWFLEVLAVLAPFAKQPLHATLDGVTNDHIDNSVDNFKATTLPLLRHFGL--DDGLDFVVKKRGAQPLGGGQVIFRCPLIRQLKAISLTEEGFIKRIRGVAYSTRVSPQTSNRIVESSRGLFNKLLPDVYIYSDHFKGVESGHSPGFALSLVAETTTGVFLGSEAAAEPGDLPEDVATRASHALCEEIQRGGCVDSTNQTIVLLLMALGPEDVAKVRIGKLTPHSISCLRLLREFFGVTFKIKPDPETKTVLLSCLGVGFKNLAKKVT 365 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4896.12051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4896.12051.1 >prot_H-paniculata_contig4896.12051.1 ID=prot_H-paniculata_contig4896.12051.1|Name=mRNA_H-paniculata_contig4896.12051.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=384bp MANSGVKSVNKPNEPSSAVLRFTGSKHFRQRVVCSLLSRRAIRIDNIRPFback to top mRNA from alignment at H-paniculata_contig4896:7552..14267+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4896.12051.1 ID=mRNA_H-paniculata_contig4896.12051.1|Name=mRNA_H-paniculata_contig4896.12051.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6716bp|location=Sequence derived from alignment at H-paniculata_contig4896:7552..14267+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4896:7552..14267+ >mRNA_H-paniculata_contig4896.12051.1 ID=mRNA_H-paniculata_contig4896.12051.1|Name=mRNA_H-paniculata_contig4896.12051.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2304bp|location=Sequence derived from alignment at H-paniculata_contig4896:7552..14267+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |