mRNA_H-paniculata_contig4892.12037.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4892.12037.1 vs. uniprot
Match: D8LN02_ECTSI (Dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN02_ECTSI) HSP 1 Score: 161 bits (408), Expect = 4.840e-44 Identity = 83/98 (84.69%), Postives = 93/98 (94.90%), Query Frame = 1
Query: 1 RLTRCEEELATIDQKAGQLKDEFSQRTREAETLRAGLETAQEILSKAQRLISQLGGEQERWQDQAMSLSDGLATLPLKMLLASGFATYLVRHPESTRK 294
RLT+CEEELA ID+KA QLK+EF+QRTREAETLRAGLE AQ IL+KAQRL+SQLGGEQ+RWQDQAMSL+D LATLPLKMLLA+GFATYLVRHPE+TRK
Sbjct: 2655 RLTQCEEELAAIDRKAAQLKEEFAQRTREAETLRAGLERAQGILTKAQRLVSQLGGEQQRWQDQAMSLADALATLPLKMLLAAGFATYLVRHPENTRK 2752
BLAST of mRNA_H-paniculata_contig4892.12037.1 vs. uniprot
Match: A0A836CKQ4_9STRA (Dynein heavy chain, N-terminal region 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKQ4_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.270e-26 Identity = 63/97 (64.95%), Postives = 70/97 (72.16%), Query Frame = 1
Query: 1 RLTRCEEELATIDQKAGQLKDEFSQRTREAETLRAGLETAQEILSKAQRLISQLGGEQERWQDQAMSLSDGLATLPLKMLLASGFATYLVRHPESTR 291
RLT CE+ELA +D + LK+EF RTREAETLRAGLE AQ L KAQ L+ QLGGEQERW+ QA SLS L TLPL LL +GFA YL R ES R
Sbjct: 2021 RLTECEDELAGLDGRVRALKEEFGARTREAETLRAGLEKAQATLDKAQSLLGQLGGEQERWKCQAKSLSLELRTLPLHTLLCAGFAAYLPRASESVR 2117
BLAST of mRNA_H-paniculata_contig4892.12037.1 vs. uniprot
Match: A0A812RCH9_SYMMI (DYNC2H1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RCH9_SYMMI) HSP 1 Score: 101 bits (251), Expect = 7.270e-23 Identity = 53/97 (54.64%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 1 RLTRCEEELATIDQKAGQLKDEFSQRTREAETLRAGLETAQEILSKAQRLISQLGGEQERWQDQAMSLSDGLATLPLKMLLASGFATYLVRHPESTR 291
RL RCEEEL +D K LK EF+ +T EAE L+ L+ A L KA+ LI QLGGEQ+RW+ QA L +A +PL+MLLA+GF TYL + PE TR
Sbjct: 548 RLQRCEEELNELDDKVAALKAEFASKTAEAERLKRNLQIAGSTLDKAEGLIGQLGGEQKRWKSQAKQLHGDIAKIPLRMLLAAGFTTYLAKSPEDTR 644
BLAST of mRNA_H-paniculata_contig4892.12037.1 vs. uniprot
Match: A0A7S3HEK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEK4_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.030e-20 Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 1 RLTRCEEELATIDQKAGQLKDEFSQRTREAETLRAGLETAQEILSKAQRLISQLGGEQERWQDQAMSLSDGLATLPLKMLLASGFATYLVRHPESTR 291
+L RCE+EL+ ID+K LK E+ RT EAE L+ L A L KA++LI QL GEQ RW+ QA L +A LP+KMLLA+GF TYL + PE R
Sbjct: 396 KLKRCEDELSEIDEKVAGLKKEYGARTAEAERLKNNLSIAGTTLDKAEKLIGQLSGEQARWKTQAAQLRMDVAKLPMKMLLAAGFTTYLAKAPEDVR 492
BLAST of mRNA_H-paniculata_contig4892.12037.1 vs. uniprot
Match: A0A5D6XL42_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL42_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.740e-20 Identity = 47/97 (48.45%), Postives = 68/97 (70.10%), Query Frame = 1
Query: 1 RLTRCEEELATIDQKAGQLKDEFSQRTREAETLRAGLETAQEILSKAQRLISQLGGEQERWQDQAMSLSDGLATLPLKMLLASGFATYLVRHPESTR 291
RL +CE+ELA+ID +++DEF ++TREA+ L GLE AQ L+KAQ L+ +LGGE++RW +Q L + L LP++MLLA+ F T+L + E R
Sbjct: 2825 RLAQCEKELASIDVVVARMRDEFGEKTREAQILTMGLEAAQSTLNKAQGLLGKLGGEKQRWSEQVKELDERLQDLPIRMLLAAAFTTFLGKCSEDAR 2921
BLAST of mRNA_H-paniculata_contig4892.12037.1 vs. uniprot
Match: A0A024G2Q7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2Q7_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.740e-20 Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = 1
Query: 1 RLTRCEEELATIDQKAGQLKDEFSQRTREAETLRAGLETAQEILSKAQRLISQLGGEQERWQDQAMSLSDGLATLPLKMLLASGFATYLVRHPESTR 291
RL +CE EL TID+K +K++F+++T+EAE LR GLE A+ L+KAQ L+ +LGGE++RW Q L L LP++MLLA+G+ T+L + E TR
Sbjct: 3271 RLLQCETELQTIDRKVDLMKNQFAEKTKEAEILRVGLERAENTLNKAQGLLGKLGGEKQRWSVQVKELKHRLQILPVRMLLAAGYTTFLGKCSEDTR 3367
BLAST of mRNA_H-paniculata_contig4892.12037.1 vs. uniprot
Match: A0A2D4BK54_PYTIN (Dynein heavy chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK54_PYTIN) HSP 1 Score: 92.0 bits (227), Expect = 1.000e-19 Identity = 47/94 (50.00%), Postives = 67/94 (71.28%), Query Frame = 1
Query: 1 RLTRCEEELATIDQKAGQLKDEFSQRTREAETLRAGLETAQEILSKAQRLISQLGGEQERWQDQAMSLSDGLATLPLKMLLASGFATYLVRHPE 282
RL +CE EL ID+K Q+K +F+++T+EAE LR GLE A+ L+KAQ L+S+LGGEQ+RW +Q L L LP++M+LA+ F T+L + E
Sbjct: 367 RLQQCEGELKKIDKKVEQMKAQFAEKTKEAEILRVGLERAESTLNKAQGLLSKLGGEQKRWSEQVKELDARLLDLPMRMMLAAAFTTFLGKSSE 460
BLAST of mRNA_H-paniculata_contig4892.12037.1 vs. uniprot
Match: D0NN79_PHYIT (Dynein heavy chain n=9 Tax=Phytophthora TaxID=4783 RepID=D0NN79_PHYIT) HSP 1 Score: 90.9 bits (224), Expect = 3.300e-19 Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 1
Query: 1 RLTRCEEELATIDQKAGQLKDEFSQRTREAETLRAGLETAQEILSKAQRLISQLGGEQERWQDQAMSLSDGLATLPLKMLLASGFATYLVRHPESTRK 294
RL +CE EL ID Q+K +F ++T+EAE LR LE AQ L+KAQ L+S+LGGE+ RW +Q L + L LP++MLLA+ F T+L + E RK
Sbjct: 3177 RLLQCESELKKIDLTVDQMKVQFGEKTKEAEILRVNLEQAQSTLNKAQGLLSKLGGEKHRWSEQVKELENRLTDLPVRMLLAAAFTTFLGKCSEDARK 3274
BLAST of mRNA_H-paniculata_contig4892.12037.1 vs. uniprot
Match: A0A3F2RUL8_9STRA (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RUL8_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 3.300e-19 Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 1
Query: 1 RLTRCEEELATIDQKAGQLKDEFSQRTREAETLRAGLETAQEILSKAQRLISQLGGEQERWQDQAMSLSDGLATLPLKMLLASGFATYLVRHPESTRK 294
RL +CE EL ID ++K +F ++T+EAE LR GLE AQ L+KAQ L+S+LGGE+ RW +Q L L LP++MLLA+ F T+L + E RK
Sbjct: 3233 RLQQCESELKKIDITVDEMKVQFGEKTKEAEILRVGLEQAQSTLNKAQGLLSKLGGEKHRWSEQVKELEHRLTDLPVRMLLAAAFTTFLGKCSEDARK 3330
BLAST of mRNA_H-paniculata_contig4892.12037.1 vs. uniprot
Match: A0A0W8DB10_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DB10_PHYNI) HSP 1 Score: 90.1 bits (222), Expect = 6.090e-19 Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 1 RLTRCEEELATIDQKAGQLKDEFSQRTREAETLRAGLETAQEILSKAQRLISQLGGEQERWQDQAMSLSDGLATLPLKMLLASGFATYLVRHPESTRK 294
RL +CE EL ID Q+K +F ++T+EAE LR LE AQ L+KAQ L+ +LGGE+ RW +Q L + L LP++MLLAS F T+L + E RK
Sbjct: 1814 RLLQCESELKKIDITVDQMKVQFGEKTKEAEILRVNLEQAQSTLNKAQGLLGKLGGEKHRWSEQVKELENRLTDLPVRMLLASAFTTFLGKCSEDARK 1911 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4892.12037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4892.12037.1 >prot_H-paniculata_contig4892.12037.1 ID=prot_H-paniculata_contig4892.12037.1|Name=mRNA_H-paniculata_contig4892.12037.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp RLTRCEEELATIDQKAGQLKDEFSQRTREAETLRAGLETAQEILSKAQRLback to top mRNA from alignment at H-paniculata_contig4892:948..1900+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4892.12037.1 ID=mRNA_H-paniculata_contig4892.12037.1|Name=mRNA_H-paniculata_contig4892.12037.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=953bp|location=Sequence derived from alignment at H-paniculata_contig4892:948..1900+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4892:948..1900+ >mRNA_H-paniculata_contig4892.12037.1 ID=mRNA_H-paniculata_contig4892.12037.1|Name=mRNA_H-paniculata_contig4892.12037.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=588bp|location=Sequence derived from alignment at H-paniculata_contig4892:948..1900+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |