mRNA_H-paniculata_contig4887.12028.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4887.12028.1 vs. uniprot
Match: D7FI09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI09_ECTSI) HSP 1 Score: 435 bits (1118), Expect = 3.360e-151 Identity = 209/314 (66.56%), Postives = 255/314 (81.21%), Query Frame = 1
Query: 1 MGSGVAYKKNLMQAPATMTTCSSEAFSNVARGDYRVPDRRGVSAKHHSAPPQERSKPFLHCTVYENDFRDCSKEADKLD---------KQGESAFKREFDTLESGTGNVDIRDVPRLIEGVLGRDARPWIKDRILKALEENRNGKITWLELKEGMSKVLASTKRDLVHGEKQVPEWLVSSRKVNPSVSQGQAVESCYQIDIGREGDIPGNRRIWYKTGMSSTTLDLFNGTTKETYQVPGYGGFMPASTMNARARQHGEMREPRVKALDLRLSYRHNTPGYTGHAPASACNDSGPARCGANSLTTSGAAALGLIL 915
MG GVAY+ + AP TMTTCSSEAFSNV RGDY+VPDRRGVSAKH SA PQ+RSKPFLH ++YE+DFR+ S E D LD + GE+AFKREFD L++G G V IRD+P+LI+GVLGRD RPWI DRILK E R+GK+TWL+L++G+ KV S + D+ + E+++PEWLV++RKV P+V+ GQ ESCYQ+D+G++G+IP +RRIWYKTGMSSTTLDLF GTTK TYQVPGYGGF+PAS MN RAR+HG+M+ R LDLRL YRHN PGYTGHAPA+ACND GP+RCG++ LTTSGAAALG+IL
Sbjct: 1 MGRGVAYENGVALAPPTMTTCSSEAFSNVTRGDYQVPDRRGVSAKHFSAKPQDRSKPFLHDSLYEHDFRNFSDEVDGLDGGEGPRGGERDGENAFKREFDRLDAGNGVVHIRDMPKLIQGVLGRDVRPWILDRILKMFEAKRDGKVTWLDLQDGLRKVAESARSDVSYKEREMPEWLVANRKVMPAVTHGQVTESCYQMDMGKDGEIPRDRRIWYKTGMSSTTLDLFEGTTKATYQVPGYGGFIPASKMNLRAREHGDMKNSRRPRLDLRLFYRHNNPGYTGHAPAAACNDPGPSRCGSDPLTTSGAAALGIIL 314
BLAST of mRNA_H-paniculata_contig4887.12028.1 vs. uniprot
Match: A0A835ZLH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLH4_9STRA) HSP 1 Score: 219 bits (559), Expect = 1.130e-65 Identity = 128/342 (37.43%), Postives = 194/342 (56.73%), Query Frame = 1
Query: 1 MGSGVAYKKNL-MQAPATMTTCSSEAFSNVARGDYRVPDRRGVSAKHHSAPPQERSKPFLHCTVYENDFRDCSKEADKLDKQGESAFKREF-----------DTLESGTG----------------------NVDIRDVPRLIEGVLGRDARPWIKDRILKALEENRNGKITWLELKEGMSKVLASTKRD---LVHGEKQVPEWLVSSRKVNPSVSQGQAVESCYQIDIGREGDIPGNRRIWYKTGMSSTTLDLFNGTTKETYQVPGYGGFMPASTMNARARQHGEMREPRVKALDLRLSYRHNTPGYTGHAPASACNDSGPARCGANSLTTSGAAALGLIL 915
+G GV Y + + AT+ T S+E+ S+V + D+R P +RG A +A R+KPFLH T+++ +RD ++E + A++ F +L +G +D+ +P L+ V + R W+ DR+ KA E +R+G++ W +++VL++ +D LV +PEW++ SRK +P++ G+ + SCYQ D+G G P R++ +K GM TT DLF GTTK+T+ VPGYGGF+PAS +NARA QHG+M++ R + +LRL ++HN GYTGH +ACND G CG + TTSGAAALGL+L
Sbjct: 46 VGHGVQYNEGPPIDEHATIKTVSAESTSHVTKQDFRPPGKRGCQAAT-AAAAVARTKPFLHSTLHKESYRDINQEIEGFAAASVEAYRCAFLAAARDVQATSISLCGSSGXXXXXXXXXXXXXXSEGPMASPTIDVNQIPGLLVAVHSKPPR-WLADRLRKACEGDRSGQVRWDTFVAALARVLSTASKDGSLLVRTA--MPEWVLISRKAHPTIQHGKRITSCYQHDVG--GAAPAQRQLTFKRGMRGTTQDLFEGTTKDTFHVPGYGGFIPASKVNARAMQHGDMQDARAYSANLRLFHKHNMAGYTGHQGHAACNDRGELLCGTHPATTSGAAALGLLL 381
BLAST of mRNA_H-paniculata_contig4887.12028.1 vs. uniprot
Match: A0A7R9UFG0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFG0_9STRA) HSP 1 Score: 176 bits (446), Expect = 2.520e-49 Identity = 107/302 (35.43%), Postives = 158/302 (52.32%), Query Frame = 1
Query: 1 MGSGVAYKKNLMQAPATMTTCSSEAFSNVARGDYRVPDRRGVSAKHHSAPPQERSKPFLHCTVYENDFRDCSKEADKLDK--QGESAFKREFDTLESGTGNVDIRDVPRLIEGVLGRDARPWIKDRILKALEENRNGKITWLELKEGMSKVLASTKRDLVHGEKQVPEWLVSSRKVNPSVSQGQAVESCYQIDIGREGDIPGNRRIWYKTGMSSTTLDLFNGTTKETYQVPGYGGFMPASTMNARARQHGEMREPRVKALDLRLSYRHNTPGYTGHAPASACNDSGPARCGANSLTTSGAAA 900
+G+G+ Y L P T + A + V Y PDRRGVSA + + K F+ TVY +DF D + KL + +AF++ F G G +D +P++++ LG A IK + A ++R G ++W + ++ + ++L + ++ G VPEWLV S K P V G A++SCYQ D+G + P + YK GM ST+ DL GTTK+TY +PGY GF+P S N+ A + R + + + GYTGH P++ ND GP CG N LTT+GA A
Sbjct: 34 VGTGLVYSAPLPTRPKWGETITKAATTLVRPRLYSAPDRRGVSALFEESN-KALPKRFMGSTVYRSDFIDLRADLVKLQDACRSPAAFQKAFFHYSRG-GELDTMLLPKVLDMALGERASEGIKSKFAAAFSKSRAGFVSWDDFRQKLGQILEAAVKEGSSGGVSVPEWLVLSSKPIPKVIVGPALKSCYQCDMGLRNENPQTKPYTYKAGMYSTSYDLLRGTTKDTYHLPGYDGFIPESRRNSFAITQVNAKRTRASRERIAENVKPAVSGYTGHIPSNLINDRGPPLCGLNPLTTTGAGA 333
BLAST of mRNA_H-paniculata_contig4887.12028.1 vs. uniprot
Match: A0A1V9ZS18_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS18_9STRA) HSP 1 Score: 125 bits (315), Expect = 3.850e-30 Identity = 100/306 (32.68%), Postives = 140/306 (45.75%), Query Frame = 1
Query: 16 AYKKNLMQAPATMTTC-SSEAFSNVARGDYRVPDR-----RGVSAKHHSAPPQERSKPFLHCTVYENDFRDCSKEADKLDKQGESAFKREFDTLESGTGNVD--IRD-VPRLIEGVLGRDARPWIKDRILKALEENRNGKITWLELKEGMSKV--LASTKRDLVHGEKQVPEWL--VSSRKVNPSVSQGQAVESCYQIDIGREGDIPGNRRIWYKT-GMSSTTLDLFNGTTKETYQVPGYGGFMPASTMNARARQHGEMREPRVKALDLRLSYRHNTPGYTGHAPASACNDSGPARCGANSLTTSG 891
A K + M T C + F +V R D+ + + RG H+ K FL ++YE DF + L + +KR FD L G RD V L+ V G + D + +G ITW +E + ++ S +HG+ P W+ +S R++ P G S +QID G G P R +T GM+STT DL +GTTK T+ +P YGGFMP + N A G+ +PR K DLRL + +N PGYTGH P + N G A G + TT+G
Sbjct: 31 ATKFSAMGQSIMNTMCVQNPTFGSVYRADFGLVTKADYVSRGPKESHNDVVA---GKKFLGQSLYETDFVHFQNQGKALLEMPREEYKRAFDALAEAGGQEPRLSRDLVKELLTAVYGTPPSARMLDIYAHMFDPIADGYITWPVFEEALERLTLFVSNATSKLHGK---PSWMEYLSLRRLLP----GTMPSSSHQIDYGTYGSDPLARPYLGRTKGMASTTSDLADGTTKNTFHIPRYGGFMPEAPHNPTAVAQGDCPQPRSKGADLRLYHLNNIPGYTGHKPVDSKNVRGEAATGTDQRTTNG 326
BLAST of mRNA_H-paniculata_contig4887.12028.1 vs. uniprot
Match: A0A485KW59_9STRA (Aste57867_12656 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW59_9STRA) HSP 1 Score: 120 bits (301), Expect = 4.400e-28 Identity = 92/304 (30.26%), Postives = 143/304 (47.04%), Query Frame = 1
Query: 28 NLMQAPATMTTCSSEAFSNVARGDYRVPDRRGVSAKHHSAPPQERSKP---------FLHCTVYENDFRDCSKEADKLDKQGESAFKREFDTLESGT----GNVDIR--DVPRLIEGVLGRDARPWIKDRILKALEENRNGKITWLELKEGMSKVLASTKRDLVHGEKQVPEWLVSSRKVNPSVSQGQAVESCYQIDIGREGDIPGNRRIWYKT-GMSSTTLDLFNGTTKETYQVPGYGGFMPASTMNARARQHGEMREPRVKALDLRLSYRHNTPGYTGHAPASACNDSGPARCGANSLTTSG 891
+++Q+ T + AF V RGD+ G+ AK P SK FL ++Y++DF + + ++ + A++ FD L GT G+ I DV L+ V G+ + D + +G ++W +E + ++ + + V WL + V P+ + S +Q+D G G P R +T GM+STT DLF+GTTK T+ +P Y GF+P + N A G+ R KA DLRL + +N PGYTGH P + N G A+ G + TT+G
Sbjct: 38 SIVQSQVTSVRVVNPAFEPVTRGDF------GLVAKQDYLHPTRSSKDAVEIAGSRTFLGQSLYQSDFLNFQDQGRRIAEIPLEAYEAAFDDLAQGTNQEGGSKKIARDDVKHLLRKVYGKAPTSRVLDIYTHMFDTCPDGFVSWEIFQEAVLRLSSFLLHETVKTTPGQAGWLDFVQHVIPNGTPS----SSHQVDFGVYGSEPIGRPYVSRTHGMASTTSDLFDGTTKATFHIPRYQGFIPQTKFNPTAVVQGDAERGRTKAEDLRLYHLNNVPGYTGHKPVDSKNVRGEAKTGTDIRTTNG 331
BLAST of mRNA_H-paniculata_contig4887.12028.1 vs. uniprot
Match: A0A6G0XRS2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRS2_9STRA) HSP 1 Score: 117 bits (293), Expect = 6.280e-27 Identity = 78/252 (30.95%), Postives = 124/252 (49.21%), Query Frame = 1
Query: 163 SKPFLHCTVYENDFRDCSKEADKLDKQGESAFKREFDTLES--------GTGNVDIRDVPRLIEGVLGRDARPWIKDRILKALEENRNGKITWLELKEGMSKVLASTKRDLVHGEKQVPEWLVSSRKVNPSVSQGQAVESCYQIDIGREGDIPGNRRIWYKT-GMSSTTLDLFNGTTKETYQVPGYGGFMPASTMNARARQHGEMREPRVKALDLRLSYRHNTPGYTGHAPASACNDSGPARCGANSLTTSG 891
S+ FL ++Y+ DF + +E ++ + AF+ FD+L ++ DV L++ V G+ I + + +G +TW +E ++ + + W+ +KV P+ + S +QID G G P R ++ GM+STT DLF+G+TK +Y +P Y GF+P + N A GE +PR KA DLRL + +N PGYTGH P + N G A+ G + TT+G
Sbjct: 85 SRTFLGQSLYQRDFANFHEEGKRIAELSMEAFQAAFDSLAEEPNQESPDAVKKINRDDVGELLQAVYGKPPATRILEIYAHMFDVCPDGFVTWEVFQEATLRLSSFLLHQTIKPSSHSIGWVDFVKKVLPNGTPS----SSHQIDYGTYGSDPLARPYMNRSHGMASTTSDLFDGSTKASYHIPRYQGFIPHTKCNPTAVSQGECEKPRPKAEDLRLYHSNNIPGYTGHKPVDSKNVRGEAKTGCDVRTTNG 332
BLAST of mRNA_H-paniculata_contig4887.12028.1 vs. uniprot
Match: A0A7S1C2K7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2K7_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.020e-26 Identity = 89/281 (31.67%), Postives = 140/281 (49.82%), Query Frame = 1
Query: 37 QAPATMTTCSSEAFSNVARGDYRVPDRRGVSA-KHHSAPPQERSKPFLHCTVYENDFRDCSKEADKL----DKQGESAFKREFDTLESGTGNVDIRDVPRLIEGVLGRDARPWIKDRILKA-LEENRNGKITWLELKEGMSKVLAST------KRDLVHGEKQVPEWLVSSRKVNPSVSQGQAVESCYQIDIGREGDIPGNRRIWYKTGMSSTTLDLFNGTTKETYQVPGYGGFMPASTMNAR-------ARQHGEMREPRVKALDLRLSYRHNTPGYTGH 822
+ PA T ++E V Y+VPD+ GV A K H P R F+ + F D + +A +L D++ E+ FKR FD +G +D+R+VP L+ + G P R+ A ++NR+GK++W E + G+++V + K + G P W+ + V + G+ +S +G +G+ P R + +GM+STT DLF GT+K T Q+PGYGGF+P + M ++ Q R+ +L L+ TPGYTGH
Sbjct: 61 RGPAVPGTLTAETQRYVKPKHYKVPDKLGVMAGKSHQLPKPAR---FVAQSASAATFVDFAAQAGRLAKMSDEEVEAYFKR-FDR--DNSGYLDLREVPALLGDLYGAPEAPERVRRLFDAYFDDNRDGKVSWEEFRNGVARVRKAMEVESRPKGPRLRG----PAWV--GKPVPAVIGPGER-KSAAMAYVGEDGEDPAARPLAEGSGMASTTKDLFEGTSKRTLQLPGYGGFIPIAAMGSKFAGEAMEQAQGSAERDTFHAKTNLTLTITGGTPGYTGH 328
BLAST of mRNA_H-paniculata_contig4887.12028.1 vs. uniprot
Match: A0A7S2S8A6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8A6_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.440e-25 Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = 1
Query: 493 PEWLVSSRKVNPSVSQGQAVESCYQIDIGREGDIPGNRRIWYKTGMSSTTLDLFNGTTKETYQVPGYGGFMPASTMNARARQHGEMREPRVKALDLRLSYRHNTPGYTGHAPASACNDSGPARCGANSLTTSGAAALGLIL 915
PEWL +S++ V S YQ D G D ++ +K GM++TTLDL GT K+T+ +PGY G +P + N + + EPR A +LRL ++HN GYTGH P A ND G G ++LT SGA+A+G++L
Sbjct: 116 PEWLTASKQTLVEPMARYPVRSSYQKDFGISVDSMKDKPYLHKNGMATTTLDLNEGTAKQTHHIPGYSGTIPVNRRNEDIVRQSDAAEPRKVASELRLYHKHNMTGYTGHNPTHASNDYGVRLSGCSTLTMSGASAVGMML 256
BLAST of mRNA_H-paniculata_contig4887.12028.1 vs. uniprot
Match: A0A024U6R1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6R1_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.340e-23 Identity = 94/314 (29.94%), Postives = 143/314 (45.54%), Query Frame = 1
Query: 28 NLMQAPATMTTCS--SEAFSNVARGDYRVPDRRGVSAKHHSAPPQE---------RSKPFLHCTVYENDFRDCSKEADKLDKQGESAFKREFDTL-----ESGTGNVDIR-------DVPRLIEGVLGRDARPWIKDRILKALEENRNGKITWLELKEGMSKVLASTKRDLVHGEKQVPEWL--VSSRKVNPSVSQGQAVESCYQIDIGREGDIPGNRRIWYKT-GMSSTTLDLFNGTTKETYQVPGYGGFMPASTMNARARQHGEMREPRVKALDLRLSYRHNTPGYTGHAPASACNDSGPARCGANSLTTSG 891
N++Q AT T + +F V RG Y G KH P S+ FL T+Y++DF + +E ++ +A+ FD L + T + D + DV ++ V G+ I D + +G I+W +E + ++ + V Q WL V+++ V G S +QID G G P R +T GM+STT D+F+GT+K T+ +P Y GF+P + N A G+ R K+ DLRL + +N PGYTGH P + N G A+ G + TT+G
Sbjct: 38 NIVQNQATNTAIRIVNPSFEAVTRGHY------GQVTKHDFETPTRPVSRGAEIANSRTFLGQTLYQHDFLNFHEEGRRIAALPMAAYAAAFDELTHVPNQDSTSDADPKQKKIARDDVKAVLCAVYGKPPTARILDIYAHMFDACPDGFISWEIFQEAVCRLSSLLLHQTVKVSGQAG-WLEFVAAKHV----LHGGTPASSHQIDFGTYGGNPLARPYVGRTNGMASTTADMFDGTSKATFHIPRYQGFIPHTKYNPTAVAQGDCEHVRGKSEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKTGTDGRTTNG 340
BLAST of mRNA_H-paniculata_contig4887.12028.1 vs. uniprot
Match: W4FY68_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FY68_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.150e-22 Identity = 93/315 (29.52%), Postives = 145/315 (46.03%), Query Frame = 1
Query: 28 NLMQAPATMTTC-----SSEA-----FSNVARGDYRVPDRRGVSAKHHSAPPQERSKPFLHCTVYENDFRDCSKEADKLDKQGESAFKREFDTL------ESGTGNVDI--------RDVPRLIEGVLGRDARPWIKDRILKALEENRNGKITWLELKEGMSKVLASTKRDLVHGEKQVPEWL--VSSRKVNPSVSQGQAVESCYQIDIGREGDIPGNRRIWYKT-GMSSTTLDLFNGTTKETYQVPGYGGFMPASTMNARARQHGEMREPRVKALDLRLSYRHNTPGYTGHAPASACNDSGPARCGANSLTTSG 891
N++Q AT T S EA F +V + DY P R + + S+ FL T+Y+NDF + E ++ + + FD L + + D+ DV L+ V G+ I + + +G I+W +E ++++ + + Q W V+++++ P G S +Q+D G G P R +T GM+STT DLF+GTTK T+ +P Y GF+P + N A G+ + R K DLRL + +N PGYTGH P + N G A+ G +S TT+G
Sbjct: 38 NIVQNQATNTAIRIVNPSFEAVTRSHFGHVTKHDYENPARPASRGREIA-----NSRTFLGQTLYQNDFLNFQDEGRRIAALPAAVYAASFDQLATVPNQDPTPSDSDLFKLKRLARDDVKTLLRQVYGKPPTSRILEIYAHMFDACPDGFISWDVFQEAVARLASFLLHQTIKISGQAG-WFDFVAAKQMLP----GGTPASSHQLDFGTYGSEPLARPYIGRTNGMASTTTDLFDGTTKATFHIPRYQGFIPQTKYNPTAVAQGDGEQTRGKEEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKTGTDSRTTNG 342 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4887.12028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4887.12028.1 >prot_H-paniculata_contig4887.12028.1 ID=prot_H-paniculata_contig4887.12028.1|Name=mRNA_H-paniculata_contig4887.12028.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=306bp MGSGVAYKKNLMQAPATMTTCSSEAFSNVARGDYRVPDRRGVSAKHHSAPback to top mRNA from alignment at H-paniculata_contig4887:5802..10461- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4887.12028.1 ID=mRNA_H-paniculata_contig4887.12028.1|Name=mRNA_H-paniculata_contig4887.12028.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4660bp|location=Sequence derived from alignment at H-paniculata_contig4887:5802..10461- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4887:5802..10461- >mRNA_H-paniculata_contig4887.12028.1 ID=mRNA_H-paniculata_contig4887.12028.1|Name=mRNA_H-paniculata_contig4887.12028.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1836bp|location=Sequence derived from alignment at H-paniculata_contig4887:5802..10461- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |