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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1551 |
| Cds size | 1524 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig488.12017.1 >prot_H-paniculata_contig488.12017.1 ID=prot_H-paniculata_contig488.12017.1|Name=mRNA_H-paniculata_contig488.12017.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=508bp
MGGSVLMRADSSADDESSTRSSGSSTDSWRQKVALSRGDRSPMRGGISPA
RAGGSPGRDAVTLVMGAVGSEAGRGGTHVVTRGTGAQAQRDCSACESVDD
MNVAQLKARAMKVGVATTGRKSALLARVKEKMAADIVLLKVTAGDPVPSA
SPVGNEDVGSLTVTLEAKESEGGGGTEEAPPELSPAAAATAAKLEIGING
YGGAVVEEAREPSNQLLNGDVEEAGSKNEYVAPGTAMAVAVVVEPSPTNA
AQNCGRRAAGSPPDNAVDLDVPSLDATEAVESIAPEQENGAMDAQEGLLP
LPPDADDPSTVEDNALVAVERSHPPSSATDTEERGRVQEPESNDIGAAVP
VFASDANDAAEVMGAQKAIAEVQGDGGGVRDEAAVGGPSVAEDSAMEENP
EVVGRETITTATMDSGESNEAMATVVSSDGPSILPSLSASSRDGGKVPSD
RVNVGDTSVEGLMSSSLACGDDVVGLSSSEATTVLDPGTLEEKLGLLKKT
YAVGVGGR back to topmRNA from alignment at H-paniculata_contig488:17778..23707- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig488.12017.1 ID=mRNA_H-paniculata_contig488.12017.1|Name=mRNA_H-paniculata_contig488.12017.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5930bp|location=Sequence derived from alignment at H-paniculata_contig488:17778..23707- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGCAGGAGAGGCGAGGACGGAATAGGATGGTGAGAATACATGTTGAAATA
CTGTCGAGGTAGTGATGGATTTTTCGGAATAGTTTTCATTTATGCAAGTC
AAGTTATATGTCAGAAACGAATCTTGATAGCGCACTGCATAACCATACCA
TCGCACGTAACTTGATATGTGGTTGATTTTTTGTGTCGCCCTCTTGGCCC
GTTGGGCCTCGCTCTGGACAGAATCTTCCAAGGGTGTGTTCTGTAGGGTA
CTGGTACTCTCGGTAGGGTATTGGAAATGGTACAGAACCCACAAAAGCAC
CGGTAGGGTATTGGAAGTGTTATAGAACCTACCGAAGTGTAGGGTATTGT
AGCTGATGCGTCACAGAACCTACAGAAAGTGATTGAGTATGTTTTCGATC
TCAGTACCGGGTACCCCGGGTACACTACAGAACACACCCTTGGAATCTTC
TGACCTAGTCCCTACCTGGGAAATGCAAACCAACGCCAATGTAACCACTT
GATTAGGGGCATAGGAAATCCCGTTATTGAGACAAGCAGTCTTTCAACAG
ACTGACTGACTATACACAAGGAAAATGAGGGACTTGGCATGGTTTTGCCC
AAAATAAACTGGGGGAGGATAAGTCTTACTGGCTTCGACACTCGTTCACT
CGCTAGCTTAGTATGATCCTGATGGCCATCCATTGCCTCAGTAAAAATAT
TGCCTCAAAATCTCCTTCCCTATTCACGTCTAATTTCGGATCATGGATGG
TGTACCGTGCAACCGATTACTCCGGAACTGACGGTACAAACATGGACACA
GGGCGGATCGGTGCTGATGCGGGCCGACAGTAGCGCTGATGATGAGAGTT
CCACGAGGAGCTCCGGGTCGTCCACGGATTCTTGGCGGCAAAAAGTGGCT
CTATCGCGGGGAGATAGATCCCCCATGCGGGGAGGTATATCACCCGCTCG
GGCAGGTGGCTCACCCGGGCGAGACGCGGTCACGTTAGTTATGGGGGCGG
TCGGAAGCGAGGCGGGTAGGGGAGGAACTCACGTTGTGACCAGGGGAACG
GGAGCACAGGCACAGAGAGACTGTTCGGCGTGCGAAAGCGTTGACGACAT
GAACGTGGCCCAGCTTAAAGCCCGCGCTATGAAGGTGAGGAGAGAGGGGG
TGGGGGGGGGTTATAATATATATCTCGGTTGTGTACACTTATCAGCATAA
TTAGATTAAATGAGGGGGGTTACTGTGGGGGATCGAATTGCGGAGTTATG
CGGTCAGTGACATTATTTTTGTGTGTCATGCAATGACTGGTGACTGAGGT
TAGGCAGCCTGAAGTAATTCTGGGATGAGTACTATGATGAGCACAATTGG
AACGAGTAAGAGGTATGATTGTGTCATTCGCATGTGCAGGTGGTGATGTT
CGTCTCAATTTCGTGAGGTAGATGACACACTTGGAGGCAGCGAAATGACC
GGATATCAGAATTTAAATCGGTTCCGATTAAAAATATAGATATATATTCT
CGGTTTGAACTGGTGTCACGCCGACGCCCACTTATAATTAGTTTACTTGA
TATTAGTATCGTTTCTGGATATGTATTCATCTTTTGACGGGTCACTTCAT
ACCACAGGATCAATACCAGCAAATTCGTGTACACATTTTTTTTTAATTCG
TGTAGAATTATGCGTCTGTGTAATATTCACTTTCATGTCGAGGCCAAGCA
GCCTTGGCTTTGAAGCTGCTGTACCACCCTGAACTGTTGTCACCCTACAC
TATCTACACTATGCCGTAGTGATAAGATCATCATAAGCACCGGTGGATAT
GGAAAGGAGGGTGGTGTTTACGTTTGTTTGATGCGATCCTAAAGGCGAGA
CCGTGCACTCCATATTGATAATATTCCGCTGGATAATTCTGTGACTACAA
CTGTTTGTCCGAAGACACAGCAATTCTCCCATGTGTCGCTTACAAAGACC
GTTGTTTTCCAGAAAATGTAGTTCCCAAAATGATTTTGTCGCCGGAAAAT
AACGACGTTCCGAGATATGTGGTATGTTTGCGCCGCAGCGTGTGCTGTAA
ATCGCCGGGCTAAGCCCCAAAAATGACGCACTGTAACACCCTTCCACCCC
CTGGACATATCCGAATACTTACAAATGGTTTGCACAAAAACTGAGAGTAT
TCGCCTTGGTGTTGTGATGAGTGGACACACGAAATCAAGTACCCCTGTCT
ATTCGATTTATGAATATTATTAGCAGTACACGAGCTCATTATGAAACTTT
GGCGAATACTTTTAGTTTTTTATGAAACCAATTTGCAAGTATTCGTGTTT
GTCCGGGGGATGTAACCTTCAATATGCCCCCCCCCCCCCCCTGATATTTT
TTTAGCCACATTTTGGCAACGTAGGAACGGGCGATTGGCCATCGGAAATT
GCTCTGATAGGAATAAAGATCCGTCTCTCCTAGAATGCGTGGTCAATGCA
ACAACTACGACATACAAAACATGAGAACCCCCCCCCCCTCCCCGCTGATA
TTATTGTTACACTTGTAACGGTATCCTTGGAAGGATGTCGTTAAAACATC
CCGATAGACCTGGTGTTTTGGCAGGCAGGCTCTTGCTTCTCGAGAATCTA
GGTTCGGAAAGTAACGTAAGGGAATGCGATTTTAAAGGATGTTATGGTAT
TGGTATTGGCGACCACAACAACACAAAATTGCCGAGACATGGTGGTGACC
TCTGTAGTCATATCTGGCGACTGCTTCAAGAGTCCCAGGGAGGCTGATGT
CTTGAGCAGATCAACAAAGGTCCAACGCTGTGCGCATCTGTCTGCATGTG
CGCACGGCTGCCATGTGTCGGTTGTTAACAAGTCGTCTCTCGCTGAAATT
AACGACTTGATCCGGTCACCTAGTTGACGACCTACTCTTGAACAGTTTTA
CTCTCACTCCTTCTGATTCGTCGATGCGAAGCAAGCGTGACCCCTTCGTT
TTGGTTATTCTACAGGTTGCGTAACAATGGTTCTGGTGTTGAAACGCTAA
TTCTGTTTGCGTCTATTTTATTGTCTACCTTTTAGTGGAGTGTCACACAG
TCATCGTGGCATCTTGGAGAAACGGGCTGTTGTGGCGCTCTCGCTACATG
CATTTATCGTGATCGATTTGCCCAGGACCCCCTCACGCTACCTATTACCT
CTCCTGGTGTGTTCAATATTACAATGTCTCTTCCAGCGCTTTCAACACTT
GATCCACGTCTCGAAGAGACTCCGGACCAATTGTTTGCAATTCAAGCCGA
CACTTTCAGCGCTACAATGAATTGGTGGATCGAGGGAGAGGGATGTGATT
AGTAGTAAATATGGCATAGGAGATACCAGCGAATACGATGGTACAAACCG
TTTTTCGGGAGCTTCGTGGAGAGAGTATTACCGACCAACGATCATGTCGG
CCGTCTTTTTTTGTCGTTGTTTTCCTGATTTTTGATTTTTTTTCGCTGTT
CCTGATAAAAACAAGAGGGTGTTGAAACTGTTTGACATGGAGGTGATTCT
CTCCCATCTTGAATATATATATGTATAGTTTGCTTCTCTGAGATACTAAT
GCAAAAGTTGTTGGCGTTTGAACGGTGTATTCGCTTTTTGACTCATATCA
CATTTGCGAAATATTTGAACAAGTGACGAAAATGATACAGGCTTGTGAGA
TAGAGGAAGTATACGGGTAGGATGCGTCTTGCGCATGTACTGTGTACGAT
ATTATGTTTTGTGCGTATGCTCGTGAGCCGGCCTGTGCAATTGGGATATG
GCCGAAATAGGCGACCCGGAAATAATCAGAACCTTGTTACATCCTTGGTG
TCTTTTACGGTGGCGCATTGTAATGAGGACGAAAAACAATCGTGCAAAAA
ACAAAACTGAGAAACTGGGGGGAAAAATGAAAAATAACATTTGGTGCTTT
TCTTGTGCGCTACTCGAGACTTCAAAGCCAGCTACAGACACCATCACAAA
AACACACACCATCACAAAAACACGAGATGTCCATGGCGCAGTTGGGTAGA
TGAAATTGAACTTGACGACTTTGACGAATTTAGTCTTCATCACAACGCGC
CACCGTAATAGAGGGTGGAAAACTGGGTTTATGAGCACAAGAACATTCGC
CTTTTTTTTTGGTTGAAATGTTGGTCGTGAAAACTGAGTTCATCTTATCA
TTTTATCATTTTATCATTTTATCGTTCTAAATTGATCTTTGTACAATAGG
CAGTGCTCACGAATCTCGCCAAGTTCAGGTCCGAGCCTCTACCAACATTG
CATTTTTTTTTTTTTAATGTTAGAACCCCTGCTTCATTGCACAGCAGCCT
TGGCGAGGGCCAGGTGTAACCAAGGCTAACTGTAAAAAAAATGTTTTGAA
AGTACCGTATTGAACGGGATAATACCTGCAATTGTCTAGTTATAAAACCT
CGCTTCACAGCATTGTCGCGGGTGGATTCCCGACGGCGACATGACAGGGT
CGAGATATCGAATCCAACCTCGATAAGCTAAAAAAGAAAGTATGCGAGTT
GAAGACGACCGTGGAAATAGTGGGGAGTAAATACGGAGCAAATACTTCTG
TTGAAACTTTCGAATTGTTTGGGTTCGCCACTTCGCCCAGCCCCCGGTTG
ATTGATGGGGGCAAGTCTGATATCTATTTTGAAGTATCATGACATACCTC
GAAATTGCCTTGTACGGTAAACATTATCTCATCATCAAGTAGAACCTACC
ATCATCCCTGCTCGACCCCCCCGCGAATTTGTTGCATTGCAGGTGGGCGT
TGCCACTACGGGACGGAAGTCAGCACTACTGGCCAGGGTCAAGGAAAAGA
TGGCTGCGGACATTGTGCTATTGAAGGTCACCGCGGGTGATCCAGTTCCC
TCGGCGTCGCCGGTTGGAAATGAGGACGTGGGCTCCTTGACGGTAACATT
GGAGGCGAAAGAGAGTGAAGGGGGAGGGGGTACAGAAGAGGCTCCTCCCG
AGTTGTCGCCGGCGGCAGCAGCGACGGCGGCGAAGTTGGAGATTGGGATC
AACGGATACGGCGGAGCGGTGGTTGAGGAAGCGCGGGAACCATCGAATCA
GCTGCTGAATGGTGATGTCGAGGAGGCTGGTTCAAAAAATGAATATGTGG
CGCCAGGAACTGCGATGGCGGTAGCGGTGGTTGTGGAACCGTCCCCGACT
AACGCTGCTCAGAACTGTGGGAGGCGTGCCGCTGGATCGCCTCCAGACAA
TGCGGTTGACCTAGACGTACCCAGCCTCGACGCTACGGAAGCTGTGGAAA
GCATCGCGCCGGAACAGGAGAACGGCGCGATGGACGCACAGGAAGGACTG
CTACCCTTACCCCCTGATGCTGACGACCCTTCGACCGTGGAGGATAATGC
TTTGGTCGCGGTGGAGCGTTCTCACCCACCGAGTAGTGCTACGGATACCG
AAGAGCGAGGCCGGGTCCAGGAGCCAGAGAGTAACGACATCGGTGCTGCT
GTCCCTGTCTTCGCTTCAGATGCAAACGATGCCGCTGAGGTCATGGGTGC
TCAAAAGGCGATAGCAGAGGTGCAGGGTGACGGTGGCGGCGTGAGAGACG
AGGCGGCGGTCGGCGGCCCGAGTGTCGCGGAGGATAGCGCGATGGAAGAA
AATCCCGAGGTTGTGGGTCGGGAAACGATAACAACGGCAACAATGGACAG
CGGCGAAAGCAACGAGGCAATGGCGACGGTTGTTTCCAGCGATGGGCCTA
GTATCTTGCCGTCGTTGTCGGCTTCGTCGCGAGACGGTGGCAAAGTGCCG
TCGGACAGGGTCAACGTTGGTGATACATCTGTCGAGGGTTTGATGAGCTC
GTCCTTAGCTTGTGGGGACGATGTTGTTGGCCTCTCTTCTTCAGAGGCTA
CTACCGTGTTGGATCCGGGTACGCTAGAGGAGAAGCTTGGTTTGCTGAAA
AAAACGTATGCCGTTGGGGTTGGTGGTCGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig488:17778..23707- >mRNA_H-paniculata_contig488.12017.1 ID=mRNA_H-paniculata_contig488.12017.1|Name=mRNA_H-paniculata_contig488.12017.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3048bp|location=Sequence derived from alignment at H-paniculata_contig488:17778..23707- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGGGCGGATCGGTGCTGATGCGGGCCGACAGTAGCGCTGATGATGA
GAGTTCCACGAGGAGCTCCGGGTCGTCCACGGATTCTTGGCGGCAAAAAG
TGGCTCTATCGCGGGGAGATAGATCCCCCATGCGGGGAGGTATATCACCC
GCTCGGGCAGGTGGCTCACCCGGGCGAGACGCGGTCACGTTAGTTATGGG
GGCGGTCGGAAGCGAGGCGGGTAGGGGAGGAACTCACGTTGTGACCAGGG
GAACGGGAGCACAGGCACAGAGAGACTGTTCGGCGTGCGAAAGCGTTGAC
GACATGAACGTGGCCCAGCTTAAAGCCCGCGCTATGAAGGGCGGATCGGT
GCTGATGCGGGCCGACAGTAGCGCTGATGATGAGAGTTCCACGAGGAGCT
CCGGGTCGTCCACGGATTCTTGGCGGCAAAAAGTGGCTCTATCGCGGGGA
GATAGATCCCCCATGCGGGGAGGTATATCACCCGCTCGGGCAGGTGGCTC
ACCCGGGCGAGACGCGGTCACGTTAGTTATGGGGGCGGTCGGAAGCGAGG
CGGGTAGGGGAGGAACTCACGTTGTGACCAGGGGAACGGGAGCACAGGCA
CAGAGAGACTGTTCGGCGTGCGAAAGCGTTGACGACATGAACGTGGCCCA
GCTTAAAGCCCGCGCTATGAAGGTGGGCGTTGCCACTACGGGACGGAAGT
CAGCACTACTGGCCAGGGTCAAGGAAAAGATGGCTGCGGACATTGTGCTA
TTGAAGGTCACCGCGGGTGATCCAGTTCCCTCGGCGTCGCCGGTTGGAAA
TGAGGACGTGGGCTCCTTGACGGTAACATTGGAGGCGAAAGAGAGTGAAG
GGGGAGGGGGTACAGAAGAGGCTCCTCCCGAGTTGTCGCCGGCGGCAGCA
GCGACGGCGGCGAAGTTGGAGATTGGGATCAACGGATACGGCGGAGCGGT
GGTTGAGGAAGCGCGGGAACCATCGAATCAGCTGCTGAATGGTGATGTCG
AGGAGGCTGGTTCAAAAAATGAATATGTGGCGCCAGGAACTGCGATGGCG
GTAGCGGTGGTTGTGGAACCGTCCCCGACTAACGCTGCTCAGAACTGTGG
GAGGCGTGCCGCTGGATCGCCTCCAGACAATGCGGTTGACCTAGACGTAC
CCAGCCTCGACGCTACGGAAGCTGTGGAAAGCATCGCGCCGGAACAGGAG
AACGGCGCGATGGACGCACAGGAAGGACTGCTACCCTTACCCCCTGATGC
TGACGACCCTTCGACCGTGGAGGATAATGCTTTGGTCGCGGTGGAGCGTT
CTCACCCACCGAGTAGTGCTACGGATACCGAAGAGCGAGGCCGGGTCCAG
GAGCCAGAGAGTAACGACATCGGTGCTGCTGTCCCTGTCTTCGCTTCAGA
TGCAAACGATGCCGCTGAGGTCATGGGTGCTCAAAAGGCGATAGCAGAGG
TGCAGGGTGACGGTGGCGGCGTGAGAGACGAGGCGGCGGTCGGCGGCCCG
AGTGTCGCGGAGGATAGCGCGATGGAAGAAAATCCCGAGGTTGTGGGTCG
GGAAACGATAACAACGGCAACAATGGACAGCGGCGAAAGCAACGAGGCAA
TGGCGACGGTTGTTTCCAGCGATGGGCCTAGTATCTTGCCGTCGTTGTCG
GCTTCGTCGCGAGACGGTGGCAAAGTGCCGTCGGACAGGGTCAACGTTGG
TGATACATCTGTCGAGGGTTTGATGAGCTCGTCCTTAGCTTGTGGGGACG
ATGTTGTTGGCCTCTCTTCTTCAGAGGCTACTACCGTGTTGGATCCGGGT
ACGCTAGAGGAGAAGCTTGGTTTGCTGAAAAAAACGTATGCCGTTGGGGT
TGGTGGTCGGGTGGGCGTTGCCACTACGGGACGGAAGTCAGCACTACTGG
CCAGGGTCAAGGAAAAGATGGCTGCGGACATTGTGCTATTGAAGGTCACC
GCGGGTGATCCAGTTCCCTCGGCGTCGCCGGTTGGAAATGAGGACGTGGG
CTCCTTGACGGTAACATTGGAGGCGAAAGAGAGTGAAGGGGGAGGGGGTA
CAGAAGAGGCTCCTCCCGAGTTGTCGCCGGCGGCAGCAGCGACGGCGGCG
AAGTTGGAGATTGGGATCAACGGATACGGCGGAGCGGTGGTTGAGGAAGC
GCGGGAACCATCGAATCAGCTGCTGAATGGTGATGTCGAGGAGGCTGGTT
CAAAAAATGAATATGTGGCGCCAGGAACTGCGATGGCGGTAGCGGTGGTT
GTGGAACCGTCCCCGACTAACGCTGCTCAGAACTGTGGGAGGCGTGCCGC
TGGATCGCCTCCAGACAATGCGGTTGACCTAGACGTACCCAGCCTCGACG
CTACGGAAGCTGTGGAAAGCATCGCGCCGGAACAGGAGAACGGCGCGATG
GACGCACAGGAAGGACTGCTACCCTTACCCCCTGATGCTGACGACCCTTC
GACCGTGGAGGATAATGCTTTGGTCGCGGTGGAGCGTTCTCACCCACCGA
GTAGTGCTACGGATACCGAAGAGCGAGGCCGGGTCCAGGAGCCAGAGAGT
AACGACATCGGTGCTGCTGTCCCTGTCTTCGCTTCAGATGCAAACGATGC
CGCTGAGGTCATGGGTGCTCAAAAGGCGATAGCAGAGGTGCAGGGTGACG
GTGGCGGCGTGAGAGACGAGGCGGCGGTCGGCGGCCCGAGTGTCGCGGAG
GATAGCGCGATGGAAGAAAATCCCGAGGTTGTGGGTCGGGAAACGATAAC
AACGGCAACAATGGACAGCGGCGAAAGCAACGAGGCAATGGCGACGGTTG
TTTCCAGCGATGGGCCTAGTATCTTGCCGTCGTTGTCGGCTTCGTCGCGA
GACGGTGGCAAAGTGCCGTCGGACAGGGTCAACGTTGGTGATACATCTGT
CGAGGGTTTGATGAGCTCGTCCTTAGCTTGTGGGGACGATGTTGTTGGCC
TCTCTTCTTCAGAGGCTACTACCGTGTTGGATCCGGGTACGCTAGAGGAG
AAGCTTGGTTTGCTGAAAAAAACGTATGCCGTTGGGGTTGGTGGTCGG back to top
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