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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal anchor |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-22_001970.1 |
| Exons | 2 |
| Model size | 580 |
| Cds size | 366 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4876.12012.1 >prot_H-paniculata_contig4876.12012.1 ID=prot_H-paniculata_contig4876.12012.1|Name=mRNA_H-paniculata_contig4876.12012.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
MKLRLQNFFMNANPQRNQQQEKGQLRQQQLEQPQPREIWYLAIIVDLAYI
SGILPPAYARVVRFVALIVLIHSGILALLITAALPLSVPLTFVCFARRCL
RQFNDMAEKGVANLSKATESSS back to topmRNA from alignment at H-paniculata_contig4876:3900..6763- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4876.12012.1 ID=mRNA_H-paniculata_contig4876.12012.1|Name=mRNA_H-paniculata_contig4876.12012.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2864bp|location=Sequence derived from alignment at H-paniculata_contig4876:3900..6763- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAAAGGTCGAATTCTTAGAGTATCTTCCATTGACCTACATAAAATGACAA
GTCTTGACGATCCCTCAATGCTGAATTCCTGGACCGACGGATCTCGATGA
ATAAACGAACTAATATAAGAATACAAAACAAACCCTACAAAGTTTCGTTG
AACCGTCCCGTACTGCCTCTGGAGATCGTCTCTCTAGTCCCTGGAAGTTC
TGTAGTTTCGTCATGAAGCTCCGTTTACAAAATTTTTTCATGAACGCGAA
TCCACAACGAAATCAACAACAGGAGAAGGGGCAACTGCGACAGCAGCAGC
TGGAGCAGCCCCAACCGAGAGAAATATGGTATTTGGCTATTATCGTTGAT
CTCGCCTACATCTCTGGCATCTTACCACCTGCCTACGCCAGGGTCGTGCG
ATTTGTTGCGCTTATCGTTCTGATTCATAGCGGGATTCTGGCCCTGCTTA
TCACTGCTGCGCTTCCGCTATCGGTGCCGCTTACTTTCGTATGTTTCGCC
AGGCGGTGTTTAAGGGTGAGTACTGTCTGCATTGCATTGTAATTCAAAAG
AAGGTACATTCTTGCACTATTATACCTGCTGCTGGTTGATGCGTAGGTAT
GATATACACAGGAGTTCCGCTGGGGTATCAAGTGCTAAGTGTACAAGTAT
GTTTAGTGTTTTACTACACTGTCTATCTGTACCTCAATGTAGTGTACTCT
ACTAAAGTTTTGTAGCGGCACCTTCATGCCTTGTCTTCCTAGAGAACGGT
AGCCCGAAACCTGCGACAGCAAACACAGTACCTCACTAACCTTGCTTATA
GGCATCAAGATCGGGTACGCTGGGAACCATCCTATCATGTACAGACGGAC
AGTTTTCCAGCCGTTTGTTATACCGTACTGACTGTCCATCTGTATCCAAT
ATCCAGAGTACTACCTCTAAATGTATTCGCGAAGCGGAGAGCGGAATGCT
CGGATTTTGTGTGCAATTATATGCTAAATGCTTCGTGTATGGCGGGTACT
GACTGTGGCTCTATAGACAGTAATTCCCACCAGCAGTAAATATCTGCAAA
TTTCAGACGGTACGGATATCGTAAAACCCACGCAGAAAAACAACGCCTCG
AAAGCGCATAGTTTGCTGGTCGAGTGTTCCTGTGATAACCGCGACTACGA
TTGTTGCATTTGTGGGCAATACAGTACCTGCCACACGTAAAATGTGCAAA
TCTCGAACTTGGCTGAAATTTTCAGTTTACAGAATTAGCTTGCATTTGCA
CCCCAGAAACAACGGTGTGTCTGTTTCTTTGTTGGAACATTCCTGCAGGA
AGCCTGCCTACGCATAAGAAAACAACCCTGAGATCCACGGACCGACGCCC
GAACGGGTAGGGTAGCTCGTGAACTGAGCATCGCTGGAAGTCTAGTCAGA
GGTCTTTTAGTGGGTGCAACCCCCACACTACCTACTTGGTTCGGCCGAAC
CGGGGTGGCGCCTACCCCGCAGAGGAACAAATAACTCTGTTCTGTTAATG
TAAAAATACTTCGATATGGAAGCTTCGGGTAAAGGTTTTTGCCTTAGCCT
TCCGGGGGGTTAAAAAAAAAAATGAGATTTTTGGAAAGTTACCGACCGCC
CCAAGCCTGCGAGCCGGCTGCAACTGGAACGAAAAGAGGGGAAAAGGTTC
TTCCTCACTGCCCGCCGAAGCAAGAAGCGCAACCTGAGCATTGACTTTTG
AGTTTCTTATGAGCGGGGAGCGTTGGAAGTATAGTCAACCAGGAAAGAGC
CACCATTCCGTTCCGTTATCATGTGTGAAGTCCCGGGGTATGATTTGCTA
GTACGTATGTAGAGGGTTTTGTATTACAAAGGCATGGGGCTACGGCAGGA
GGGGGGGGCGGGGGGTGTTTGTCAAGCTCCGCTCCCAAGGCGGCTCAAAA
GAAAACTTATATCAAAACCTGGTCAATGGCAAGCGTTTAGGCATCCTTAA
AGGTGCACAATGTACCGTTAGGAGTGAACTTACTGTTTGAAAGGGAAATA
TAGATTTTGGCTACTGCAGCCGCTCCGCAAGCGGCTCAAATATTGAAATA
AAGTTGGCTCAAATTACCTCCCGCCCTTCCGTAGTCCGACCCAAAAAAAC
GTCTGCGCGCCGTGCGGATGACCAACAAGGCCGTTTCACTGCAATGATGA
ATGTATTTCGTAGAACAGTCAATAGTTGGAAACGGCGGATGACACTGCAA
TAGGGTATAAGAGCCCGTACATTATGTACCGATCCACGCAACAGGCTATA
CACTACCGCACAGCAGGAGCATGCGCTTTTCTCCCTCCTTTTTTTCAGGC
ACCTTGAAACCACGCACTTTGTATATGTTTTCCCGCCGTTGGGCTTTTCT
GTTCACACCTATATATATATATAATGCCTCAGGGAGAGAGCATTGGCTAG
AGGTTGTGCTCGATATCTTGGGTATGGGGAGTTGCAAAAAAGGGTCTACT
ATGTTCAACAGCCTTGGTCATTCGTTGGGGATAAGCGTGCGGCCTACACA
GGCCCAGTCGGCGTTGCAGGCAGTTCGTTTCTCCACTTGTTCCTGCCGAT
GCTTTCATCTCTTTCATTCAACCATGTCGTTGCGGCTCCGTTGACTGCCG
ACGTCTGCTCCACGCTCTCACCGATGTCACCAAAGCAGCGACGAGATACA
TTGCGTGGTGTTTGACGGTGTTTGACGGTGAAGCCACGTTCCTTCGTTCC
TTTCGATTCGAGCTTCTTGCCGCTTACCAGTAAAGAATGTTTGCCTTGCC
TTGCCCGGTTCTTGCGTGCGTATGCCTTTCCACTGTCCACTGTGAGATCA
GCAATTTAATGACATGGCGGAAAAAGGAGTAGCGAACCTAAGCAAAGCTA
CAGAAAGTTCTTCT back to topCoding sequence (CDS) from alignment at H-paniculata_contig4876:3900..6763- >mRNA_H-paniculata_contig4876.12012.1 ID=mRNA_H-paniculata_contig4876.12012.1|Name=mRNA_H-paniculata_contig4876.12012.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at H-paniculata_contig4876:3900..6763- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCTCCGTTTACAAAATTTTTTCATGAACGCGAATCCACAACGAAA
TCAACAACAGGAGAAGGGGCAACTGCGACAGCAGCAGCTGGAGCAGCCCC
AACCGAGAGAAATATGGTATTTGGCTATTATCGTTGATCTCGCCTACATC
TCTGGCATCTTACCACCTGCCTACGCCAGGGTCGTGCGATTTGTTGCGCT
TATCGTTCTGATTCATAGCGGGATTCTGGCCCTGCTTATCACTGCTGCGC
TTCCGCTATCGGTGCCGCTTACTTTCGTATGTTTCGCCAGGCGGTGTTTA
AGGATGAAGCTCCGTTTACAAAATTTTTTCATGAACGCGAATCCACAACG
AAATCAACAACAGGAGAAGGGGCAACTGCGACAGCAGCAGCTGGAGCAGC
CCCAACCGAGAGAAATATGGTATTTGGCTATTATCGTTGATCTCGCCTAC
ATCTCTGGCATCTTACCACCTGCCTACGCCAGGGTCGTGCGATTTGTTGC
GCTTATCGTTCTGATTCATAGCGGGATTCTGGCCCTGCTTATCACTGCTG
CGCTTCCGCTATCGGTGCCGCTTACTTTCGTATGTTTCGCCAGGCGGTGT
TTAAGGCAATTTAATGACATGGCGGAAAAAGGAGTAGCGAACCTAAGCAA
AGCTACAGAAAGTTCTTCTCAATTTAATGACATGGCGGAAAAAGGAGTAG
CGAACCTAAGCAAAGCTACAGAAAGTTCTTCT back to top
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