mRNA_H-paniculata_contig4868.11999.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4868.11999.1 vs. uniprot
Match: A0A6H5JAJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ8_9PHAE) HSP 1 Score: 209 bits (532), Expect = 6.750e-66 Identity = 98/130 (75.38%), Postives = 113/130 (86.92%), Query Frame = 1
Query: 1 MRGSPFRKGEDGKVRDRSGTVIDLFPGVREILLSVHRDERFQESTLAIASRTEHERWAREVMALLELEPGVLMRDVFTPRLSEIYRGTKVRHLGELRKNSGVPYEDMIFFDDWDQNCKDVGKLGVTCIEC 390
MRG+PF K +DGKVRDRSG VIDLFPGVRE LL VHR RF+++ LAIASRT HERWAR+VM L+ELEPG+LMR VF+ +EIY G+KVRH GE+R+NS VPYE+MIFFDDWDQNCKDVGKLGVTC+EC
Sbjct: 110 MRGAPFTKEKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFS--FTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVEC 237
BLAST of mRNA_H-paniculata_contig4868.11999.1 vs. uniprot
Match: D7G270_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G270_ECTSI) HSP 1 Score: 206 bits (524), Expect = 1.100e-64 Identity = 97/130 (74.62%), Postives = 112/130 (86.15%), Query Frame = 1
Query: 1 MRGSPFRKGEDGKVRDRSGTVIDLFPGVREILLSVHRDERFQESTLAIASRTEHERWAREVMALLELEPGVLMRDVFTPRLSEIYRGTKVRHLGELRKNSGVPYEDMIFFDDWDQNCKDVGKLGVTCIEC 390
MRG+PF K +DGKVRDRSG VIDLFPGVRE LL VHR RF+++ LAIASRT HERWAR+VM L+ELEPG+LMR VF+ +EIY G+KVRH GE+R+NS V YE+MIFFDDWDQNCKDVGKLGVTC+EC
Sbjct: 116 MRGAPFTKKKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFS--FTEIYSGSKVRHFGEIRRNSKVSYEEMIFFDDWDQNCKDVGKLGVTCVEC 243
BLAST of mRNA_H-paniculata_contig4868.11999.1 vs. uniprot
Match: A0A7S2V3W0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3W0_9STRA) HSP 1 Score: 129 bits (324), Expect = 9.200e-35 Identity = 63/129 (48.84%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 7 GSPFRKGEDGKVRDRSGTVIDLFPGVREILLSVHRDERFQESTLAIASRTEHERWAREVMALLELEPGVLMRDVFTPRLSEIYRGTKVRHLGELRKNSGVPYEDMIFFDDWDQNCKDVGKLGVTCIECP 393
G+PF K GKV DRSGT + LF VR IL + E F + +A ASRTE+ WA EVM+L+ ++ + M DVF +EIY GTK H L ++S + ++DM+FFDDW+ NC+DV +LGVT +ECP
Sbjct: 87 GAPFEK-RGGKVYDRSGTEVKLFRDVRSILRRIRTSEEFSSTKIASASRTEYPEWAYEVMSLMPVDDNLTMADVF--EFNEIYPGTKTAHFRRLHQDSQIAFKDMVFFDDWNGNCRDVARLGVTTMECP 212
BLAST of mRNA_H-paniculata_contig4868.11999.1 vs. uniprot
Match: A0A5J4YXB8_PORPP (Magnesium-dependent phosphatase 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXB8_PORPP) HSP 1 Score: 116 bits (290), Expect = 1.720e-29 Identity = 56/129 (43.41%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 7 GSPFRKGEDGKVRDRSGTVIDLFPGVREILLSVHRDERFQESTLAIASRTEHERWAREVMALLELEPGVLMRDVFTPRLSEIYRGTKVRHLGELRKNSGVPYEDMIFFDDWDQNCKDVGKLGVTCIECP 393
G+PF+ +DG V DRSGT + L R +LL + DER++++ +A+ASRT+ WA E M + + G+ M+ T + EIY+G KV H L + +G+PY+ MIF+D+ NC DVG LGV CI P
Sbjct: 106 GAPFKPNKDGNVVDRSGTEVRLLGNSRSLLLELRTDERWKDTQVAVASRTDEPTWAEECMQKIMIADGMNMKS--TIDIEEIYKGNKVHHFRALHEKTGIPYDQMIFYDNETANCHDVGTLGVLCIFTP 232
BLAST of mRNA_H-paniculata_contig4868.11999.1 vs. uniprot
Match: A0A836CCC3_9STRA (Acid phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC3_9STRA) HSP 1 Score: 112 bits (281), Expect = 9.050e-28 Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 1
Query: 1 MRGSPFRKGEDGKVRDRSGTVIDLFPGVREILLSVHRDERFQESTLAIASRTEHERWAREVMALLELEPGVLMRDVFTPRLSEIYRGTKVRHLGELRKNSGVPYEDMIFFDDWDQNCKDVGKLGVTCIECP 393
++G+PFR G+V DR GT + L P VR +L ++ + +A ASRT W+R+VM L + G+LM ++F EI G K H EL S VPY++M+FFDDW++N KDV LGVTCI CP
Sbjct: 150 LKGAPFRVAA-GRVLDREGTEVALRPDVRNVLEELYTHPGLSSTRIACASRTNRGNWSRQVMELFVVFDGLLMSELFD--FVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCP 277
BLAST of mRNA_H-paniculata_contig4868.11999.1 vs. uniprot
Match: A0A7S0KS31_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KS31_MICPS) HSP 1 Score: 102 bits (254), Expect = 1.080e-24 Identity = 60/136 (44.12%), Postives = 79/136 (58.09%), Query Frame = 1
Query: 1 MRGSPFRKGEDGKVRDRSGTVIDLFPGVRE-ILLSVHRDERFQES----TLAIASRTEHERWAREVMALLELEPGVLMRDVFTPRLSEIYRGTKVRHLGELRKNSGVPYEDMIFFDDWDQNCKDVGKLGVTCIECP 393
M G+P+ K E G+V D GT + ++P E I L + D FQ S +A ASRT +WA E + LL L+ G +RD L EI+ GTK +H LR SGVPY M+FFD+ N ++VG+LGVT I CP
Sbjct: 54 MCGAPWSKDELGRVTDTCGTELRVYPAASESIRLMLDPDGPFQSSGVGAKVAFASRTNRGKWAMEALDLLRLDEGTSLRDAVGD-LVEIFPGTKRKHFASLRNKSGVPYSQMLFFDNERINVEEVGQLGVTSIYCP 188
BLAST of mRNA_H-paniculata_contig4868.11999.1 vs. uniprot
Match: UPI000C76388E (magnesium-dependent phosphatase 1-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C76388E) HSP 1 Score: 103 bits (256), Expect = 1.120e-24 Identity = 46/129 (35.66%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 7 GSPFRKGEDGKVRDRSGTVIDLFPGVREILLSVHRDERFQESTLAIASRTEHERWAREVMALLELEPGVLMRDVFTPRLSEIYRGTKVRHLGELRKNSGVPYEDMIFFDDWDQNCKDVGKLGVTCIECP 393
G+PF++ +DG + D++GT + L V+ ++ D ++Q+S + +AS + WARE ++ ++ G+ + DVF EIY+ +K HL E+ + +GVP E+MIFFD+ NC+ V ++GVT + P
Sbjct: 71 GAPFKQNKDGTLIDKAGTKVKLLGDVKNLMHEFATDPKWQQSKICVASSCDEPDWARECISKFDIGAGLKLSDVFDKNNIEIYKRSKDHHLREIARKTGVPLEEMIFFDNQTNNCQTVSRIGVTVVYTP 199
BLAST of mRNA_H-paniculata_contig4868.11999.1 vs. uniprot
Match: L1IT04_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IT04_GUITC) HSP 1 Score: 101 bits (251), Expect = 2.010e-24 Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = 1
Query: 7 GSPFRKGEDGKVRDRSGTVIDLFPGVREILLSVHRDERFQESTLAIASRTEHERWAREVMALLELEPGVLMRDVFTPRLSEIYRGTKVRHLGELRKNSGVPYEDMIFFDDWDQNCKDVGKLGVTCIECP 393
GSPF+K D + DRSGT L EIL + R++ + +A S T+ WA E M L E+ G+ + V + EI++ +K H + K +G+PYEDMIFFD+ NC V LGVTCI P
Sbjct: 33 GSPFKKNNDKTLTDRSGTRCYLMGNTAEILREIKTSPRWKGAKIAYCSCTDEPTWADECMRLFEIGDGMTLESVVD--IKEIFKSSKSTHFRNIHKKTGIPYEDMIFFDNEAHNCHTVAPLGVTCIHTP 159
BLAST of mRNA_H-paniculata_contig4868.11999.1 vs. uniprot
Match: C1DZW3_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1DZW3_MICCC) HSP 1 Score: 100 bits (250), Expect = 4.310e-24 Identity = 59/136 (43.38%), Postives = 80/136 (58.82%), Query Frame = 1
Query: 1 MRGSPFRKGEDGKVRDRSGTVIDLFPG-VREILLSVHRDERFQES----TLAIASRTEHERWAREVMALLELEPGVLMRDVFTPRLSEIYRGTKVRHLGELRKNSGVPYEDMIFFDDWDQNCKDVGKLGVTCIECP 393
M G+P+ K E G+V D GT + ++P + I L + D FQ S +A ASRT +WA E + LL L+ G +R+ L EI+ GTK +H LRK SGVPY M+FFD+ N ++VG+LGVT I CP
Sbjct: 36 MCGAPWSKDELGRVTDTCGTELRVYPAAIESIRLILDPDGPFQSSGVGAEVAFASRTNRGKWAMEALDLLRLDEGTSLREAVGD-LVEIFPGTKRKHFEALRKKSGVPYSQMLFFDNERINVEEVGQLGVTSIYCP 170
BLAST of mRNA_H-paniculata_contig4868.11999.1 vs. uniprot
Match: A0A6T6SH26_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A6T6SH26_9CRYP) HSP 1 Score: 100 bits (249), Expect = 1.160e-23 Identity = 48/129 (37.21%), Postives = 74/129 (57.36%), Query Frame = 1
Query: 7 GSPFRKGEDGKVRDRSGTVIDLFPGVREILLSVHRDERFQESTLAIASRTEHERWAREVMALLELEPGVLMRDVFTPRLSEIYRGTKVRHLGELRKNSGVPYEDMIFFDDWDQNCKDVGKLGVTCIECP 393
G+PF+K DG + D GT + EIL ++ D ++++S +A S T+ WA E M L E+ G+ M + +I++ K H + K++G+PYE MIFFD+ + NC+ V +LGVTCI P
Sbjct: 79 GAPFKKNSDGSLTDCKGTRCTMMGNSAEILHELNTDPKWKDSKVAYCSCTDEPSWAAECMKLFEVGGGITMEKAAP--IKQIFKANKTEHFKRIHKDTGIPYEQMIFFDNEEHNCRSVKQLGVTCIYTP 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4868.11999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4868.11999.1 >prot_H-paniculata_contig4868.11999.1 ID=prot_H-paniculata_contig4868.11999.1|Name=mRNA_H-paniculata_contig4868.11999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp MRGSPFRKGEDGKVRDRSGTVIDLFPGVREILLSVHRDERFQESTLAIASback to top mRNA from alignment at H-paniculata_contig4868:776..2047+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4868.11999.1 ID=mRNA_H-paniculata_contig4868.11999.1|Name=mRNA_H-paniculata_contig4868.11999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1272bp|location=Sequence derived from alignment at H-paniculata_contig4868:776..2047+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4868:776..2047+ >mRNA_H-paniculata_contig4868.11999.1 ID=mRNA_H-paniculata_contig4868.11999.1|Name=mRNA_H-paniculata_contig4868.11999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=786bp|location=Sequence derived from alignment at H-paniculata_contig4868:776..2047+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |