mRNA_H-paniculata_contig4854.11976.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A7S3NFY8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFY8_9STRA) HSP 1 Score: 299 bits (765), Expect = 3.080e-101 Identity = 150/192 (78.12%), Postives = 168/192 (87.50%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDL AGGRRVGHK RS P+S NVYL LLVKL+RFLARRTDS F KVVLKRLYMS+TNR PLS+SRLAR+M+ K+ TAVIVG VTDD RLLEVPK+SVCALRFTETARARIL +GGEC+T DQLALRAPKGS TVLLRGPK RE +HFGHR+T ++ THD VKPYVRSKGRKFE+ARGRR++NGFK+
Sbjct: 1 MGIDLKAGGRRVGHKARSEPLSDNVYLKLLVKLYRFLARRTDSKFVKVVLKRLYMSRTNRPPLSVSRLARFMKDKDEKTAVIVGTVTDDPRLLEVPKMSVCALRFTETARARILKSGGECLTFDQLALRAPKGSGTVLLRGPKKVREVYKHFGHRSTPTSVKTHDHVKPYVRSKGRKFERARGRRKTNGFKI 192
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A7S2UVJ6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ6_9STRA) HSP 1 Score: 298 bits (764), Expect = 4.370e-101 Identity = 152/192 (79.17%), Postives = 169/192 (88.02%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDL AGGRRVGHKVR++P SKNVYL LLV+L+RFLARRTDS F KVVLKRLYMSKTN P+SISRL RYM+GKE TAVIVG VTDD RLL++P L VCAL+FTE ARARIL AGGE +T DQLAL+ PKG+ TVLLRGPKNAREAVRHFGHR+T++++HTH GVKPYVRSKGRKFEKARGRR S GFKV
Sbjct: 1 MGIDLKAGGRRVGHKVRTSPKSKNVYLNLLVRLYRFLARRTDSKFVKVVLKRLYMSKTNSPPMSISRLTRYMKGKEDQTAVIVGTVTDDSRLLKLPALKVCALKFTEAARARILKAGGEVLTFDQLALQQPKGAGTVLLRGPKNAREAVRHFGHRSTLDSVHTHCGVKPYVRSKGRKFEKARGRRGSRGFKV 192
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A835ZAE3_9STRA (Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE3_9STRA) HSP 1 Score: 298 bits (764), Expect = 4.370e-101 Identity = 150/192 (78.12%), Postives = 168/192 (87.50%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDLVAGGRRVGHK RSAP S NVYLGLL KL++FLARRT+S+F VLKRLYMSKTNR PL + RL+++M GK+ TAV+V VTDD RLLEVPK++VCALRFTE+AR+RI+AAGGEC+T DQLAL+ P GSN VLLRGPKNAREA RHFGHRTTV N HTH+GVKPYVRSKGRKFEKARGRR SNGFKV
Sbjct: 1 MGIDLVAGGRRVGHKARSAPKSDNVYLGLLSKLYKFLARRTNSNFVATVLKRLYMSKTNRPPLGLGRLSKFMIGKDGLTAVVVATVTDDNRLLEVPKMTVCALRFTESARSRIVAAGGECLTFDQLALKVPTGSNCVLLRGPKNAREANRHFGHRTTVTNPHTHNGVKPYVRSKGRKFEKARGRRASNGFKV 192
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: F0Y951_AURAN (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y951_AURAN) HSP 1 Score: 283 bits (725), Expect = 3.810e-95 Identity = 143/192 (74.48%), Postives = 163/192 (84.90%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGID+VAGGRRVGHK R+ S+NVYL LLVKL+RFLARRTDS F K VLKRL+MS+TNR PLS+S LAR+MR K+ AV+VG +TDD R+L VPK++VCALRFTETARARI+ AGGEC+T DQLALRAPKGSNTVLLRGPK ARE HFGHR+T ++ TH GVKPYVR+KGRKFEKARGRR S GFKV
Sbjct: 1 MGIDIVAGGRRVGHKARTDTKSENVYLKLLVKLYRFLARRTDSAFVKTVLKRLFMSRTNRPPLSLSALARFMREKDDKIAVLVGTITDDPRMLTVPKMTVCALRFTETARARIVKAGGECLTFDQLALRAPKGSNTVLLRGPKKAREVYSHFGHRSTTTSVKTHCGVKPYVRAKGRKFEKARGRRHSRGFKV 192
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A7S2BC13_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BC13_9STRA) HSP 1 Score: 284 bits (726), Expect = 4.040e-95 Identity = 148/194 (76.29%), Postives = 164/194 (84.54%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEAS--TAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDLVAGGRRVGHKVR+APVS NVYL LLVKL+ FLARRT SDF K V KRL+MSKTN+ P+S+S++A+YM +E TAVIVG VTDD+RL E+P L VCALRFTE ARARI+ AGGEC+T DQLAL APKGSN VLLRG N REA++HFGHR TV NLHTHD VKPYVRSKGRKFEKARGRRRS GFKV
Sbjct: 12 MGIDLVAGGRRVGHKVRTAPVSDNVYLKLLVKLYAFLARRTGSDFCKTVTKRLFMSKTNKPPISVSKIAKYMTPQEGKGKTAVIVGTVTDDIRLSELPALRVCALRFTEGARARIVKAGGECLTFDQLALEAPKGSNCVLLRGSMN-REALKHFGHRCTVKNLHTHDNVKPYVRSKGRKFEKARGRRRSTGFKV 204
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A4D9D1Z3_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1Z3_9STRA) HSP 1 Score: 280 bits (716), Expect = 8.630e-94 Identity = 142/192 (73.96%), Postives = 163/192 (84.90%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDL +GGRR GHK R+AP S NVYL LLVKL+RFLARRTDS+F V+LKRL+MSK NR P++ISRL R+M+GKE TAVIVG +TDD R+LEVPKLSV AL+ T TARARIL AGGE +T D+LALRAPKG+N VLLRGP + REA+ HFGHR+TV N+HTHD VKPY RSKGRKFEKARGRRRS GFK+
Sbjct: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSNFNAVILKRLFMSKNNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRSKGRKFEKARGRRRSTGFKI 191
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A5D6XV36_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XV36_9STRA) HSP 1 Score: 273 bits (699), Expect = 4.860e-91 Identity = 138/191 (72.25%), Postives = 161/191 (84.29%), Query Frame = 1
Query: 4 GIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
GIDL+AGG+ VG K R+AP S+NVYL LLV+L+RFLARRT+S F +VL+RLY S TN+AP+SI R+ARYM G E AVIVG VTDD+RLL VPK+SV AL FTETARARI AGGEC++ DQLALRAPKG+NTVLLRG + ARE RHFGH++TVN++HTHD VKPYVRSKGRKFE ARGRR+S GFKV
Sbjct: 12 GIDLIAGGKVVGKKNRTAPKSENVYLNLLVRLYRFLARRTNSKFNSIVLRRLYQSNTNQAPMSIGRVARYMTGHEGKLAVIVGTVTDDIRLLNVPKVSVVALAFTETARARITNAGGECLSFDQLALRAPKGANTVLLRGRRTAREVYRHFGHKSTVNSVHTHDHVKPYVRSKGRKFEMARGRRKSRGFKV 202
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A2D4C5G9_PYTIN (60S ribosomal protein L182 putative n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C5G9_PYTIN) HSP 1 Score: 272 bits (695), Expect = 1.410e-90 Identity = 134/192 (69.79%), Postives = 163/192 (84.90%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDL+AGG+ VG K R+AP SK+VYL LLV+L+RFLARRTDS F +VLKRLY S TN+ P+SI+R+ARYM+ E AV+VG+VTDD+RL +VPKL++ ALRFTETARARI+ AGGEC+T DQLALRAPKG+NTVLLRG K ARE +HFGH++T+ ++ TH G KPYVRSKGRKFE+ARGRR+S GFKV
Sbjct: 1 MGIDLIAGGKVVGKKSRTAPKSKDVYLNLLVRLYRFLARRTDSKFNSIVLKRLYQSNTNQVPMSIARVARYMKDHEGKIAVVVGSVTDDIRLFDVPKLTIAALRFTETARARIVKAGGECLTFDQLALRAPKGANTVLLRGRKTAREVYKHFGHKSTLESVGTHCGAKPYVRSKGRKFERARGRRKSRGFKV 192
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A8D0ZR79_PIG (Ribosomal_L18e/L15P domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A8D0ZR79_PIG) HSP 1 Score: 270 bits (691), Expect = 1.620e-90 Identity = 140/157 (89.17%), Postives = 146/157 (92.99%), Query Frame = 1
Query: 106 FLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
FL RRTDS FAKVVLKRLYMSKTNRAPLS+SRL +R KE STAV+VG VTDDVRLL VPKLSVCALRFTETARARILAAGGECIT DQLALRAPKG+NTVLLRGPKNAREAVRHFGH+TTVNNLHTHD VKPYVRSKGRKFEKARGRRRSNGFK+
Sbjct: 2 FLTRRTDSAFAKVVLKRLYMSKTNRAPLSLSRL---VRNKETSTAVLVGTVTDDVRLLAVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHKTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKI 155
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A7S2W9J6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9J6_9STRA) HSP 1 Score: 270 bits (691), Expect = 7.760e-90 Identity = 140/192 (72.92%), Postives = 160/192 (83.33%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDL AGGR+V HK R AP S+NVYL LLVKL+ FL+RRTDS F KVVLKRLYMSK N+ P+S+S++AR+M E AVIVG VTDDVRL E+PKL VCALRFT ARARIL AGGEC+T DQLAL AP GS TVLLRG KN REA++HFGH+T+V + HTHD VKPY+R+KGRKFE+ARGRRRSNGFKV
Sbjct: 11 MGIDLKAGGRKVHHKERKAPKSQNVYLKLLVKLYSFLSRRTDSKFCKVVLKRLYMSKLNKPPISVSKIARFMGAHEDKIAVIVGPVTDDVRLTELPKLRVCALRFTAGARARILKAGGECLTFDQLALVAPSGSKTVLLRGSKN-REALKHFGHKTSVASPHTHDNVKPYIRAKGRKFERARGRRRSNGFKV 201 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4854.11976.1 >prot_H-paniculata_contig4854.11976.1 ID=prot_H-paniculata_contig4854.11976.1|Name=mRNA_H-paniculata_contig4854.11976.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=194bp MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLback to top mRNA from alignment at H-paniculata_contig4854:11814..13476+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4854.11976.1 ID=mRNA_H-paniculata_contig4854.11976.1|Name=mRNA_H-paniculata_contig4854.11976.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1663bp|location=Sequence derived from alignment at H-paniculata_contig4854:11814..13476+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4854:11814..13476+ >mRNA_H-paniculata_contig4854.11976.1 ID=mRNA_H-paniculata_contig4854.11976.1|Name=mRNA_H-paniculata_contig4854.11976.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1164bp|location=Sequence derived from alignment at H-paniculata_contig4854:11814..13476+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |