mRNA_H-paniculata_contig4819.11912.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4819.11912.1 vs. uniprot
Match: D7G6P6_ECTSI (tRNA (adenine(58)-N(1))-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P6_ECTSI) HSP 1 Score: 457 bits (1177), Expect = 1.530e-151 Identity = 216/267 (80.90%), Postives = 244/267 (91.39%), Query Frame = 2
Query: 35 MDFRAGRNADGSRDTSTIGQVESAPVIRLGDMVVFFEGREAIGFDRMEDKGIWQCRHGAFHHGDMLGKPFGSRVFSRTTKGFVHALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLNLKPGDVVVESGTGSGVMSSSIMRTIAPTGFLHTFEFNEVRSTRAREEFAENGLGDLARVVHRDVCAERGDGGGFGEDLDGKADAVFLDLPEPWLAVSHARVALKAGKTLCSYSPCIEQVMKTCEALRLEGFHSITTIEFRLRSINHTEVK 835
MDFRAGR +DGSRD +TI + +AP+IR GDMVVFFEGRE IGFDRM+ K IWQCRHGAFHH +++GKPFGSRVFSRTTKG+V+ALSPTPELWSHVVPNRTQIVQDFDQSIVIFRL+LKPGD VVESGTGSGVMS++IMRTIAP+GFLH+FEFNE R+TRA+EEF EN LG L + VHRDVCA RGDGGGFGE+LDGKADAVFLDLPEPWLAV+HA++ LK GK LCSYSPCIEQVMKTCEALR EGFHS++TIEFRLR+IN+ EV+
Sbjct: 1 MDFRAGRCSDGSRDPATICEASTAPLIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEVE 267
BLAST of mRNA_H-paniculata_contig4819.11912.1 vs. uniprot
Match: A0A835ZH22_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH22_9STRA) HSP 1 Score: 302 bits (773), Expect = 1.710e-92 Identity = 141/212 (66.51%), Postives = 168/212 (79.25%), Query Frame = 2
Query: 227 MLGKPFGSRVFSRTTKGFVHALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLNLKPGDVVVESGTGSGVMSSSIMRTIAPTGFLHTFEFNEVRSTRAREEFAENGLGDLARVVHRDVCAERGDGGGFGEDLDGKADAVFLDLPEPWLAVSHARVALKAGKTLCSYSPCIEQVMKTCEALRLEGFHSITTIEFRLRSINHTEVKLEVPDFGCS 862
M+G+P+GS+VFSR+TKGF++ LSPTPELWS VVPNRTQIVQ DQS VIFRL++KPGD V+ESGTGSG MS++IMR IAPTG LHTFEFNE R+ RAR EF +NGL L V HRDVC G+GG FG+ L+GKADA+FLDLPEPWLAV HA ALK K +CSYSPC+EQV +TC LR GFHS+ T+E R+R E L++PD+G S
Sbjct: 1 MIGQPYGSKVFSRSTKGFIYVLSPTPELWSTVVPNRTQIVQPSDQSFVIFRLDMKPGDTVIESGTGSGAMSTAIMRAIAPTGHLHTFEFNEARADRARAEFVKNGLASLVTVKHRDVCGREGEGG-FGDQLNGKADAIFLDLPEPWLAVPHAHAALKPNKKVCSYSPCVEQVQRTCTVLREWGFHSLATVELRIRPYQLYEADLDLPDWGSS 211
BLAST of mRNA_H-paniculata_contig4819.11912.1 vs. uniprot
Match: A0A1V9Z9G2_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9G2_9STRA) HSP 1 Score: 272 bits (695), Expect = 7.120e-82 Identity = 128/261 (49.04%), Postives = 174/261 (66.67%), Query Frame = 2
Query: 80 STIGQVESAPVIRLGDMVVFFEGREAIGFDRMEDKGIWQCRHGAFHHGDMLGKPFGSRVFSRTTKGFVHALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLNLKPGDVVVESGTGSGVMSSSIMRTIAPTGFLHTFEFNEVRSTRAREEFAENGLGDLARVVHRDVCAERGDGGGFGEDLDGKADAVFLDLPEPWLAVSHARVALKAGKTLCSYSPCIEQVMKTCEALRLEGFHSITTIEFRLRSINHTEVKLEVPDFGCS 862
S++ P++ +GD+V+ +E ++ + ME ++Q RHGAFHH DM+G +G++V+SR +KG+++ LSPTPELWS + +RTQIV D S ++F + PG +VVESGTGSG +++S R I P+G ++TFEFN R+ A+EEFA NGL +A V RD C + GF E LDGK D VFLDLP PW AV HA+ LK G SYSPC+EQV KTC+ALR++GF I TIE RL + V + VPDFG +
Sbjct: 20 SSVSMWAGKPIVEVGDLVILYETHNSVTYAFMEKDAVYQNRHGAFHHNDMIGHRYGTKVYSRMSKGYIYILSPTPELWSKALRHRTQIVFTLDASAILFNTHCGPGKIVVESGTGSGALTTSFARAIQPSGHVYTFEFNATRAQVAKEEFAANGLNKVATVECRDACEQ-----GFPEHLDGKVDVVFLDLPCPWKAVGHAKRVLKTGGAFASYSPCMEQVQKTCDALRIDGFDRIRTIETRLMTYTARYVSMPVPDFGAN 275
BLAST of mRNA_H-paniculata_contig4819.11912.1 vs. uniprot
Match: A0A7S3XKL8_HETAK (tRNA (adenine(58)-N(1))-methyltransferase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKL8_HETAK) HSP 1 Score: 272 bits (695), Expect = 1.220e-81 Identity = 139/228 (60.96%), Postives = 168/228 (73.68%), Query Frame = 2
Query: 227 MLGKPFGSRVFSRTTKGFVHALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLNLKPGDVVVESGTGSGVMSSSIMRTIAPTGFLHTFEFNEVRSTRAREEFAENGLGDLARVVHRDVCAERGDGGGFGEDLDGKADAVFLDLPEPWLAVSHARVALKAGKTLCSYSPCIEQVMKTCEALRLEGFHSITTIEFRLRSINHTEVKLEVPDFGCSPVPATPAPENDPLAKT 910
M+GK +GS+V SR + G+V L PTPELW+ + +RTQIVQ D ++V+ RL+LKPG VV+ESGTGSG MS +IMR IAPTG LHTFEFNE R+ +A EEF +N +G L V HRDVCAE G GGFG+ L+GK DAVFLDLP PWLA+ A ALKAG+TLCSYSPCIEQV+KTC+ LR GFHSITT+E RLRS + V+ E PDFG ++DP KT
Sbjct: 1 MIGKTYGSQVQSRISTGWVFLLKPTPELWTLALDHRTQIVQGSDAALVVLRLHLKPGMVVIESGTGSGAMSYAIMRAIAPTGHLHTFEFNEHRAKQAEEEFKKNRVGHLVTVRHRDVCAE-GAEGGFGDHLNGKVDAVFLDLPAPWLALPRAHAALKAGETLCSYSPCIEQVIKTCDKLRELGFHSITTVENRLRSYDVRPVEFETPDFG----------DDDPTPKT 217
BLAST of mRNA_H-paniculata_contig4819.11912.1 vs. uniprot
Match: A0A1V9ZMU4_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZMU4_9STRA) HSP 1 Score: 263 bits (672), Expect = 2.640e-78 Identity = 126/257 (49.03%), Postives = 170/257 (66.15%), Query Frame = 2
Query: 110 VIRLGDMVVFFEGREAIGFDRMEDKGIWQCRHGAFHHGDMLGKPFGSRVFSRTTKGFVHALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLNLKPGDVVVESGTGSGVMSSSIMRTIAPTGFLHTFEFNEVRSTRAREEFAENGLGDLARVVHRDVCAERGDGGGFGEDLDGKADAVFLDLPEPWLAVSHARVALKAGKTLCSYSPCIEQVMKTCEALRLEGFHSITTIEFRLRSINHTEVKLEVPDFGCSPVPATP 880
++ +GD+V+ FE ++ + ME G++ RHGAFHH DM+G+ FG++V+SR +KG++ LSPT ELWS + +RTQIV D S ++F + PG +V+ESGTGSG +++S R + P G ++TFEFN R+ A+EEF NGL +A + RD C + GF E LDGK D VFLDLP PW AV HA+ ALKAG SYSPC+EQV +TC+ALR++GF I TIE RL + V L VP+FG TP
Sbjct: 41 IVEVGDLVILFETHNSVTYAYMEKDGVYHNRHGAFHHNDMIGQRFGTKVYSRMSKGYIFILSPTSELWSKALRHRTQIVFTLDASAILFNTHCCPGKIVIESGTGSGALTTSFARAVQPNGHVYTFEFNATRAKVAKEEFDANGLSKVATIECRDACEQ-----GFPEQLDGKVDIVFLDLPCPWKAVGHAKRALKAGGAFASYSPCMEQVQRTCDALRVDGFDRIRTIETRLMTYCSRTVPLPVPNFGFDDQTTTP 292
BLAST of mRNA_H-paniculata_contig4819.11912.1 vs. uniprot
Match: B7FTZ8_PHATC (tRNA (adenine(58)-N(1))-methyltransferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FTZ8_PHATC) HSP 1 Score: 253 bits (647), Expect = 5.010e-76 Identity = 130/236 (55.08%), Postives = 163/236 (69.07%), Query Frame = 2
Query: 113 IRLGDMVVFFEGREAIGFDRMEDKGIWQCRHGAFHHGDMLGKPFGSRVFSRTTKG--FVHALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLNLKPGDVVVESGTGSGVMSSSIMRTIAPTGFLHTFEFNEVRSTRAREEFAENGLGDLARVVHRDVCAERGDGGGFGEDLDGKA-DAVFLDLPEPWLAVSHARVALKAGKTLCSYSPCIEQVMKTCEALRLEGFHSITTIEFRLR 811
IR GD+VV E + + F ++ I+ R+G FHH D +GKPFG ++ SR+ +G FV+ L PTPELW+ + +RTQIV + DQS VIF+L+LKP VVESGTGSG MS +I+RTIAP G LHT+EFNE R+ AR EFA NG+G L V H+DVC RGDGG DL ++ D VFLDLPEPWLAV HA +K L SYSPC+EQ + E LR GFHSI T+E+RL+
Sbjct: 1 IRTGDLVVIMESFDNLAFVYAKEGEIFSNRNGNFHHNDFIGKPFGCKIRSRSHRGYGFVYLLKPTPELWARSLNHRTQIVHELDQSQVIFQLHLKPNMTVVESGTGSGAMSHAILRTIAPHGKLHTYEFNEHRADTARHEFANNGVGHLVSVHHKDVCGIRGDGG---FDLPPQSVDGVFLDLPEPWLAVPHAAFVMKPNARLASYSPCVEQTQRMVETLRQSGFHSIKTMEYRLQ 233
BLAST of mRNA_H-paniculata_contig4819.11912.1 vs. uniprot
Match: A0A6G0XQT4_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQT4_9STRA) HSP 1 Score: 254 bits (650), Expect = 1.480e-75 Identity = 121/248 (48.79%), Postives = 166/248 (66.94%), Query Frame = 2
Query: 110 VIRLGDMVVFFEGREAIGFDRMEDKGIWQCRHGAFHHGDMLGKPFGSRVFSRTTKGFVHALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLNLKPGDVVVESGTGSGVMSSSIMRTIAPTGFLHTFEFNEVRSTRAREEFAENGLGDLARVVHRDVCAERGDGGGFGEDLDGKADAVFLDLPEPWLAVSHARVALKAGKTLCSYSPCIEQVMKTCEALRLEGFHSITTIEFRLRSINHTEVKLEVPDF 853
V+ GD+V+ FE +I + M+ I+Q RHGAFHH DM+G +G++V+SR +KG+++ LSPTPELWS + +RTQIV D S +IF+ + PG +V+ESGTGSG ++++ RT+AP G ++TFEFN R+ A+EEF NGL + + RD C + GF ++L+GK D VFLDLP PW AV HA+ LK SYSPC+EQV KTC+ALRL+GF + TIE RL + V L +P F
Sbjct: 15 VVEEGDLVILFETHNSITYAYMKRDEIYQNRHGAFHHNDMIGHKYGTKVYSRMSKGYIYILSPTPELWSKALRHRTQIVFTLDASAIIFQTHCAPGKIVIESGTGSGALTTAFARTVAPHGHVYTFEFNATRAQVAKEEFHANGLDSVVTIECRDACEQ-----GFPDNLEGKVDVVFLDLPCPWKAVGHAKQMLKHNGAFASYSPCMEQVQKTCDALRLDGFDRVRTIETRLMPYSTRTVTLPLPSF 257
BLAST of mRNA_H-paniculata_contig4819.11912.1 vs. uniprot
Match: A0A7S2WUG9_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUG9_9STRA) HSP 1 Score: 254 bits (650), Expect = 3.240e-75 Identity = 130/251 (51.79%), Postives = 170/251 (67.73%), Query Frame = 2
Query: 113 IRLGDMVVFFEGREAIGFDRMEDKGIWQCRHGAFHHGDMLGKPFGSRVFSRT-TKGFVHALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLNLKPGDVVVESGTGSGVMSSSIMRTIAPTGFLHTFEFNEVRSTRAREEFAENGLGDLARVVHRDVCAERGDGGGFGEDLDGKADAVFLDLPEPWLAVSHARVALKAGKTLCSYSPCIEQVMKTCEALRLEGFHSITTIEFRLRSINHTEVKLEVPDFGCS 862
I G +V+ F + + ++ I + G FHH D++G+PFGS +S++ T+G+++AL TPELW+ +P+RTQIV + D ++V +LN+KPG V+ESGTGSG MSS + R+++PTG L TFEFNE R+ AREEF +N L L V H DVC + G GG G + G ADAVFLDLPEPW+AV HA ALK + + YSPCIEQVMKT ALR GFHSI T+E RL+S N E +VPDFG S
Sbjct: 13 IAPGSLVIVFLHHDQLDHIVIQRDSILNNKWGTFHHNDIIGQPFGSIWYSKSSTRGWLYALQATPELWAMALPHRTQIVHELDAAMVTLKLNVKPGFRVIESGTGSGAMSSVLARSLSPTGHLFTFEFNENRADAAREEFKQNNLSHLVTVAHFDVCGKGGTGGFPGVE-SGTADAVFLDLPEPWVAVPHAATALKPNRRIACYSPCIEQVMKTATALRDAGFHSIETVEVRLKSYNVREFPFKVPDFGHS 262
BLAST of mRNA_H-paniculata_contig4819.11912.1 vs. uniprot
Match: W4FYX8_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FYX8_9STRA) HSP 1 Score: 250 bits (639), Expect = 9.090e-74 Identity = 121/259 (46.72%), Postives = 166/259 (64.09%), Query Frame = 2
Query: 77 TSTIGQVESAPVIRLGDMVVFFEGREAIGFDRMEDKGIWQCRHGAFHHGDMLGKPFGSRVFSRTTKGFVHALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLNLKPGDVVVESGTGSGVMSSSIMRTIAPTGFLHTFEFNEVRSTRAREEFAENGLGDLARVVHRDVCAERGDGGGFGEDLDGKADAVFLDLPEPWLAVSHARVALKAGKTLCSYSPCIEQVMKTCEALRLEGFHSITTIEFRLRSINHTEVKLEVPDF 853
T T ++ GD+VV FE +I + ++ I+Q RHGAFHH D++G +G++V+SR +KG+++ LSPTPELWS + +RTQIV D S + F+ + PG +V+ESGTGSG ++++ RT+AP G ++TFEFN R+ A+EEF NGL ++ + RD C + GF E L GK D VFLDLP PW AV HA+ LK SYSPC+EQV +TC+ALRL+GF + TIE RL + V L VP F
Sbjct: 16 TPTFSMWAGKTIVEAGDLVVLFETHNSITYAYVKPDEIYQNRHGAFHHNDIIGNRYGAKVYSRMSKGYIYILSPTPELWSKALRHRTQIVFTLDASAITFQTHCAPGKIVIESGTGSGALTTAFARTVAPHGHVYTFEFNATRAQVAKEEFIANGLENVVTIECRDACEQ-----GFPEHLAGKVDVVFLDLPCPWKAVGHAKKMLKHHGAFASYSPCMEQVQRTCDALRLDGFDRVRTIETRLMPYSARTVALPVPSF 269
BLAST of mRNA_H-paniculata_contig4819.11912.1 vs. uniprot
Match: A0A024TN05_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TN05_9STRA) HSP 1 Score: 249 bits (635), Expect = 3.180e-73 Identity = 118/248 (47.58%), Postives = 164/248 (66.13%), Query Frame = 2
Query: 110 VIRLGDMVVFFEGREAIGFDRMEDKGIWQCRHGAFHHGDMLGKPFGSRVFSRTTKGFVHALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLNLKPGDVVVESGTGSGVMSSSIMRTIAPTGFLHTFEFNEVRSTRAREEFAENGLGDLARVVHRDVCAERGDGGGFGEDLDGKADAVFLDLPEPWLAVSHARVALKAGKTLCSYSPCIEQVMKTCEALRLEGFHSITTIEFRLRSINHTEVKLEVPDF 853
++ GD+V+ FE +I + ++ I+Q RHGAFHH D++G +G++V+SR +KG+++ LSPTPELWS + +RTQIV D S +IF+ + PG +V+ESGTGSG ++++ RT+AP G ++TFEFN R+ A++EF NGL + + RD C + GF + L GK D VFLDLP PW AV HA+ LK SYSPC+EQV +TC+ALRL+GF I TIE RL + V L VP F
Sbjct: 28 IVEAGDLVILFETHNSITYTYVKPDEIYQNRHGAFHHNDIIGNRYGAKVYSRISKGYMYVLSPTPELWSKALRHRTQIVFTLDASSIIFQTHCAPGKIVIESGTGSGALTTAFARTVAPHGHVYTFEFNATRAQVAKDEFHANGLDSVVTIECRDACEQ-----GFPDHLAGKVDVVFLDLPCPWKAVGHAKKMLKHNGAFASYSPCMEQVQRTCDALRLDGFDRIRTIETRLMPYSARTVHLPVPSF 270 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4819.11912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4819.11912.1 >prot_H-paniculata_contig4819.11912.1 ID=prot_H-paniculata_contig4819.11912.1|Name=mRNA_H-paniculata_contig4819.11912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=605bp MDFRAGRNADGSRDTSTIGQVESAPVIRLGDMVVFFEGREAIGFDRMEDKback to top mRNA from alignment at H-paniculata_contig4819:8208..13042+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4819.11912.1 ID=mRNA_H-paniculata_contig4819.11912.1|Name=mRNA_H-paniculata_contig4819.11912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4835bp|location=Sequence derived from alignment at H-paniculata_contig4819:8208..13042+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4819:8208..13042+ >mRNA_H-paniculata_contig4819.11912.1 ID=mRNA_H-paniculata_contig4819.11912.1|Name=mRNA_H-paniculata_contig4819.11912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3630bp|location=Sequence derived from alignment at H-paniculata_contig4819:8208..13042+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |