mRNA_H-paniculata_contig47400.11779.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig47400.11779.1 vs. uniprot
Match: D8LEU7_ECTSI (Cysteine desulfurase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEU7_ECTSI) HSP 1 Score: 117 bits (292), Expect = 1.960e-29 Identity = 56/68 (82.35%), Postives = 65/68 (95.59%), Query Frame = 1
Query: 1 VSDLGVDMLTVVGHKFGAPKGVAALYVRKGLSLPSMIHGGGQESGRRAGTENVMLIAGMGKAAEVCRV 204
V+DLGVDMLT+VGHKFGAPKGVAAL+VR+GL+LP MIHGGGQE+GRRAGTENV+LI+GMGKAAE+ V
Sbjct: 295 VADLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDV 362
BLAST of mRNA_H-paniculata_contig47400.11779.1 vs. uniprot
Match: A0A7S4C1G4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1G4_CHRCT) HSP 1 Score: 100 bits (250), Expect = 4.390e-24 Identity = 47/67 (70.15%), Postives = 57/67 (85.07%), Query Frame = 1
Query: 1 VSDLGVDMLTVVGHKFGAPKGVAALYVRKGLSLPSMIHGGGQESGRRAGTENVMLIAGMGKAAEVCR 201
V +LGVDMLT+VGHK GAPKGV ALYVR GL LP ++HGGGQE+GRRAGTE+V+L+A +G AA + R
Sbjct: 105 VRELGVDMLTLVGHKMGAPKGVGALYVRAGLKLPPLLHGGGQEAGRRAGTESVLLLAALGAAATIAR 171
BLAST of mRNA_H-paniculata_contig47400.11779.1 vs. uniprot
Match: X1HSN1_9ZZZZ (Aminotran_5 domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1HSN1_9ZZZZ) HSP 1 Score: 100 bits (248), Expect = 4.930e-24 Identity = 51/76 (67.11%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 1 VSDLGVDMLTVVGHKFGAPKGVAALYVRKGLSLPSMIHGGGQESGRRAGTENVMLIAGMGKAAEVC-RVLRKNKKI 225
V DLGVDMLT+ GHKF APKG+ ALYVRKG+ L S++HGG QESG RAGTENV I G+GKAAE+ LR ++KI
Sbjct: 79 VEDLGVDMLTISGHKFHAPKGIGALYVRKGVELESLVHGGRQESGLRAGTENVPSIVGLGKAAELALHTLRDSEKI 154
BLAST of mRNA_H-paniculata_contig47400.11779.1 vs. uniprot
Match: A0A8J4FGX8_9CHLO (Aminotran_5 domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FGX8_9CHLO) HSP 1 Score: 102 bits (254), Expect = 7.670e-24 Identity = 47/67 (70.15%), Postives = 57/67 (85.07%), Query Frame = 1
Query: 1 VSDLGVDMLTVVGHKFGAPKGVAALYVRKGLSLPSMIHGGGQESGRRAGTENVMLIAGMGKAAEVCR 201
V LGVD LT+VGHKFGAPKGVAALY+R+G++LP+ HGGGQE+GRRAGTEN+M + G+G AA V R
Sbjct: 281 VEALGVDALTIVGHKFGAPKGVAALYIRRGVTLPNYFHGGGQEAGRRAGTENIMQVVGLGAAAVVAR 347
BLAST of mRNA_H-paniculata_contig47400.11779.1 vs. uniprot
Match: A0A2P6TKZ5_CHLSO (Cysteine desulfurase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TKZ5_CHLSO) HSP 1 Score: 101 bits (252), Expect = 9.550e-24 Identity = 46/65 (70.77%), Postives = 59/65 (90.77%), Query Frame = 1
Query: 1 VSDLGVDMLTVVGHKFGAPKGVAALYVRKGLSLPSMIHGGGQESGRRAGTENVMLIAGMGKAAEV 195
V LGVDMLT+VGHKFGAPKGVAALY+R+G+++ ++ GGGQE GRRAGTENV+L+AG+GKAA++
Sbjct: 223 VQQLGVDMLTIVGHKFGAPKGVAALYIRRGVAIERLLCGGGQEGGRRAGTENVLLLAGLGKAADL 287
BLAST of mRNA_H-paniculata_contig47400.11779.1 vs. uniprot
Match: A0A8J4ASW9_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4ASW9_9CHLO) HSP 1 Score: 100 bits (249), Expect = 2.710e-23 Identity = 46/67 (68.66%), Postives = 57/67 (85.07%), Query Frame = 1
Query: 1 VSDLGVDMLTVVGHKFGAPKGVAALYVRKGLSLPSMIHGGGQESGRRAGTENVMLIAGMGKAAEVCR 201
V+ LGVD LT+VGHKFGAPKGVAALY+R G++LP+ HGGGQE+GRRAGTEN+M + G+G AA V +
Sbjct: 288 VAALGVDALTIVGHKFGAPKGVAALYIRHGVTLPNYFHGGGQEAGRRAGTENIMQVVGLGAAAAVAQ 354
BLAST of mRNA_H-paniculata_contig47400.11779.1 vs. uniprot
Match: A0A0D2N0J3_9CHLO (Cysteine desulfurase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N0J3_9CHLO) HSP 1 Score: 100 bits (249), Expect = 3.300e-23 Identity = 47/64 (73.44%), Postives = 57/64 (89.06%), Query Frame = 1
Query: 1 VSDLGVDMLTVVGHKFGAPKGVAALYVRKGLSLPSMIHGGGQESGRRAGTENVMLIAGMGKAAE 192
V LGVD+LTVVGHKFGAPKGVAAL++R+G+ LPS++HGGGQE G RAGTE+ +LIAG+G AAE
Sbjct: 237 VRRLGVDLLTVVGHKFGAPKGVAALFIRRGVHLPSLLHGGGQERGARAGTESTLLIAGLGAAAE 300
BLAST of mRNA_H-paniculata_contig47400.11779.1 vs. uniprot
Match: A0A835WMZ9_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WMZ9_9CHLO) HSP 1 Score: 100 bits (248), Expect = 3.730e-23 Identity = 47/65 (72.31%), Postives = 55/65 (84.62%), Query Frame = 1
Query: 1 VSDLGVDMLTVVGHKFGAPKGVAALYVRKGLSLPSMIHGGGQESGRRAGTENVMLIAGMGKAAEV 195
V LGVD++TVVGHKFGAPKGVAALYVR+G SLP+ +GGGQE GRRAGTENVM + G+G AA +
Sbjct: 224 VGALGVDLMTVVGHKFGAPKGVAALYVRRGTSLPNYFYGGGQEGGRRAGTENVMQVVGLGAAAHI 288
BLAST of mRNA_H-paniculata_contig47400.11779.1 vs. uniprot
Match: D8U8R1_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8R1_VOLCA) HSP 1 Score: 99.8 bits (247), Expect = 4.030e-23 Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 1 VSDLGVDMLTVVGHKFGAPKGVAALYVRKGLSLPSMIHGGGQESGRRAGTENVMLIAGMGKAAEVCR 201
V LGVD LT+VGHKFGAPKGVAALY+R+G+ L + HGGGQE GRRAGTEN+M + G+G AAE+ R
Sbjct: 196 VRTLGVDALTIVGHKFGAPKGVAALYIRRGVHLDNYFHGGGQEGGRRAGTENIMQVVGLGAAAELAR 262
BLAST of mRNA_H-paniculata_contig47400.11779.1 vs. uniprot
Match: E1ZDB8_CHLVA (Aminotran_5 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZDB8_CHLVA) HSP 1 Score: 99.8 bits (247), Expect = 4.610e-23 Identity = 48/65 (73.85%), Postives = 56/65 (86.15%), Query Frame = 1
Query: 1 VSDLGVDMLTVVGHKFGAPKGVAALYVRKGLSLPSMIHGGGQESGRRAGTENVMLIAGMGKAAEV 195
V LGVDMLTVV HKFG PKGVAALYVR+G+ L ++ GGGQE GRRAGTENV+L+AG+GKAAE+
Sbjct: 214 VQQLGVDMLTVVAHKFGGPKGVAALYVRRGVRLERLLCGGGQEGGRRAGTENVVLVAGLGKAAEL 278 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47400.11779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig47400.11779.1 >prot_H-paniculata_contig47400.11779.1 ID=prot_H-paniculata_contig47400.11779.1|Name=mRNA_H-paniculata_contig47400.11779.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp MLTVVGHKFGAPKGVAALYVRKGLSLPSMIHGGGQESGRRAGTENVMLIAback to top mRNA from alignment at H-paniculata_contig47400:261..488+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig47400.11779.1 ID=mRNA_H-paniculata_contig47400.11779.1|Name=mRNA_H-paniculata_contig47400.11779.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=228bp|location=Sequence derived from alignment at H-paniculata_contig47400:261..488+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig47400:261..488+ >mRNA_H-paniculata_contig47400.11779.1 ID=mRNA_H-paniculata_contig47400.11779.1|Name=mRNA_H-paniculata_contig47400.11779.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=414bp|location=Sequence derived from alignment at H-paniculata_contig47400:261..488+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |