mRNA_H-paniculata_contig47207.11741.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A284QR55_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284QR55_ARMOS) HSP 1 Score: 186 bits (472), Expect = 2.660e-50 Identity = 124/382 (32.46%), Postives = 189/382 (49.48%), Query Frame = 1
Query: 1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDL-------------------------------VIAGRLRRDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKISAPDRGRS-----GNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISVLCLSSALRSAVRVMVTVWKDSLMPIG-------RKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSIGFDAGGA 1017
R VA+GFSQ+ G DFFET APV + T R + ++A + + + G+DV AYLN ++E +++ PPE S S L+ LYGLKQSGR WN ++ +G+G R +D C Y + D G ++VAV+VDD+ ++ ++ R+ GT T+S+ +YI +VLER ++C+ V P + V++ G S Y VGSLMYA+ G+RPD ++ V ++ +++P E + KR+F L L S + T+ D L+P R R+ S T GGA++ S+KQ S+ EAEY+A +E ++LR LL +G GA
Sbjct: 48 RLVAKGFSQIPGTDFFETYAPVVRLDTFRLLMAIAVQRNLIIHGMDVVGAYLNGKLDESIYMAQPPEYSDGSGK---AAHLKLMLYGLKQSGRVWNEKLNATFLGLGYTRLMSDQCVYIRQMDSGP--IIVAVHVDDMTLLAPDDETMSNMKEELKKKLNVMDMGEIQYILGMKIDRNWDKGTITLSQKAYILKVLERMGMNDCKPVKMPMDPNVRLEKIPAGDSRGVNTATRQYYHTGVGSLMYAANGSRPDIAHAVTELSKYVQNPAAEHVTALKRVFRY----LKGTLDSGITYGRTM--DELIPYSDSDWGEDRADRRSTSGYVCTYAGGAVTWSSKKQPTVALSTMEAEYMALAHTTREVIWLRALLTELGLPPDGA 418
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY) HSP 1 Score: 190 bits (482), Expect = 2.460e-49 Identity = 137/376 (36.44%), Postives = 191/376 (50.80%), Query Frame = 1
Query: 1 RPVAQGFSQVEGEDFF--ETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAG------------------------------RLRRDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKI------SAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISVLCLSSALRSAVRVMVTV------WKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSI 996
R VAQGFSQV G D+ ET APV+ + ++RTI SLAA HD+EL +DV +AYLN +EE ++++LPP + + V RL+K+LYGLKQ+GR W T+ + +G R D ++ R+ GE+ ++VA VDDL I G +RRDR T IS+ SYI ++ R++ DE +S P + + S P + YR VGSLMYA+ G RPD ++ V ++ M++P R + KR VL R V T + D+ + + S TL+GGAIS S+KQ V SSTEAEYIA A KEA++LR +L I
Sbjct: 1094 RLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKR-----VLRYLKGSRELWLVYGTNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLSDI 1461
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY) HSP 1 Score: 188 bits (478), Expect = 8.190e-49 Identity = 137/401 (34.16%), Postives = 209/401 (52.12%), Query Frame = 1
Query: 1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAG------------------------------RLRRDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKIS------APDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISVLCLSSALRSAV-RVMVTVWKDSLMPIGRKMSRNE-SPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSIGFDAGGARHCLR--TINQPLISV-RDLAHTA 1080
R VAQGFSQ+ G DF +T APVA ++++R I +LAA HD+++ +DV AYLNA +EEE+F+K PP + ++ +V LR ++YGLKQSGR W + L +GL RS D C ++ +D L++A+ VDD IAG +RRDR T ++S+ +YI ++ R++ ++ + +STP E +S P + YR +GSLMYA+ G RPD ++ V ++ M++P R + KR+ L + R V + D+ G R+ ++GGA+S ++KQ V SSTEAEYIA A KEA+++R LL I D ++ LR T N+ I++ +D A+ A
Sbjct: 1026 RLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKE-HWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKSTREKWLTYGLTRNGVEGFSDA--DWGSSEHRHSICGYVFLIDGGAVSWSAKKQPVVALSSTEAEYIALTHAAKEAIWVRYLLADI-LDPDVSKFALRLHTDNRSAIALAKDNAYHA 1422
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 188 bits (477), Expect = 1.100e-48 Identity = 127/374 (33.96%), Postives = 191/374 (51.07%), Query Frame = 1
Query: 1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAG------------------------------RLRRDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKIS------APDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISV------LCLSSALRSAVRVMVTVWKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSI 996
R VAQGF+QV G DF ET APVA ++++R I +LAA +D+EL +DV AYLN +EEE++++ PP + ++ V RL++ LYGLKQSGR ++ + L +GL RS D C ++ R++ LL+A+ VDD IAG +RRDR T ++S+ +YI +L R++ + + ++TP + +S P + + YR +GSLMYA+ G RPD +Y V ++ M++P R + KR+F L W + + + S L+GGA+S ++KQ V SSTEAEYIA A KEA++LR LL +
Sbjct: 988 RLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKE-HLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDGVEGFSDADWGSA------EHRHSISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADV 1354
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A0J7K690_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K690_LASNI) HSP 1 Score: 187 bits (474), Expect = 2.080e-48 Identity = 123/356 (34.55%), Postives = 187/356 (52.53%), Query Frame = 1
Query: 1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAGRLRRDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAE-GKVKISAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRI--FVISVLCLSSALRSAVRVMVTVWKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSIGFDAGGARHCLRTINQPLISV 1059
R V +GFSQ G D+ ET APV ++R +FSLAA+ DFE+ D+ A+LN ++EE+F++LP V+ D V +L+KSLYGLKQS R WN FL S D C Y +G +L+A+YVDD ++ + ++ + +Y+ V +R++ ++ +G+STP E GK + + +G + YR VGSLM+A+ RPD + V +R +E E ++ KRI + A + ++ DS R+ S GG IS S +Q++ S+TEAEY+AA +A KEA+++R L+ S+G A G LR NQ I +
Sbjct: 631 RLVVRGFSQRPGIDYNETYAPVIRYESIRFLFSLAAKEDFEIAQFDIKTAFLNGELDEEIFMQLPTRVT----DAGNVVKLQKSLYGLKQSPRQWNKRFHQFLCKFNFISSEADRCVYKGNIEG--ERVLLALYVDDGLVMAKTQQ-------AVEMKNYLLRVAKRFNMEDAKGISTPMEAGKYLVINNNDTSAGMNVPYREAVGSLMFAACVTRPDIMFAVAVVSRYLEQSATEHWTAVKRIIRYAKETADYGIVYDGATAEPLVIYSDSDFAADPDTRRSTSGYVTVHCGGPISWQSIRQKIVALSTTEAEYVAASDATKEAIWIRRLMKSVGAAAVGHATELRLDNQGSIKL 973
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A0K8TKJ8_TABBR (Putative polyprotein (Fragment) n=1 Tax=Tabanus bromius TaxID=304241 RepID=A0A0K8TKJ8_TABBR) HSP 1 Score: 179 bits (455), Expect = 8.840e-48 Identity = 126/363 (34.71%), Postives = 183/363 (50.41%), Query Frame = 1
Query: 1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIA-----------GRLRRDRPNGTRT-----------------ISEGSYIREVLERYDFDECRGVSTPAEGKVKISAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISVLCLSSAL---RSAVRVMVTVWKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSI 996
R V +GFSQ G D+ ET +PVA M T+R+I S+AA L DV A+L +EE +F+K P + V L++SLYGLKQ+ R WN + DFL G G S D C Y +G + L++ +YVDD ++A G L+ + +++ IS+ +Y +++LER++F C+ VSTP +IS P + YR VG+LMY G RPD +Y V +R++E+P +ED KR+F L + R+ ++ V+ D+ K R+ S GGAIS S++Q V S+TEAE IAA E KEA++L L I
Sbjct: 65 RLVVKGFSQRHGIDYSETFSPVAKMGTIRSILSIAASEKMHLTQFDVSTAFLYGELEETVFMKQP---QGYEDGTSKVCLLKRSLYGLKQAPRCWNKRLGDFLRGHGFKASDADPCLYVRERNGKK--LILVIYVDDGLLAATDAQEMDIFIGELKSEFKIVSKSADYFLGLEIEQEENFIKISQKTYAKKILERFNFSNCKPVSTPMLKGTEISTPGKDDKTTGFPYRQAVGALMYLMLGTRPDLAYSVGFISRKLENPTQEDVVRVKRVFRYIAGTLDFGILYHRNMDVGVLEVYSDADFGGCIKTGRSTSGIIVKYAGGAISWLSQRQAVVATSTTEAEIIAANEGAKEAIWLSRLFRGI 422
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM) HSP 1 Score: 184 bits (467), Expect = 2.290e-47 Identity = 138/369 (37.40%), Postives = 186/369 (50.41%), Query Frame = 1
Query: 1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTD-SCFYFSRDDGGETNLLVAVYVDDLVIA-----------------------GRLR--------RDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKISAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIF-----VISVLCLSSALRSAVRVMVTVWKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSI 996
R VA+GF+QVEG DF ET APV ++LRT+ +L A+HD EL +DV AYLN +EEE++++ PP F D V RL KS+YGLKQ+GR W ++ +G RS D F F RD G T L++ +YVDD+ A G +R RDR T+S+ YI +VLER+ F + R +STP K+ ++ +Y+ VGSLMYA G RPD +Y V ++ P E ++ R F + + R + T + DS R+ S TL G AIS S+KQQ SSTEAEY+AA A KEAV+LR LL +
Sbjct: 961 RVVAKGFTQVEGIDFDETFAPVMKFNSLRTLLALTAKHDLELHQMDVKTAYLNGDLEEEIYMEPPPG---FRGDGNIVWRLIKSIYGLKQAGRVWYMRIEREFRDLGYSRSYADYGVFVFHRDSDG-TLLIIIIYVDDIGAASNSMEAILQAKARLSKIFEITDLGEMRWILGMEVTRDRALKIVTLSQKRYIADVLERHGFADARPISTPVSVNQKLEKLPAAEI-DARKYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDEL--TGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDL 1322
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: UPI00193CA733 (uncharacterized protein LOC105202753 n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193CA733) HSP 1 Score: 183 bits (464), Expect = 2.640e-47 Identity = 129/402 (32.09%), Postives = 196/402 (48.76%), Query Frame = 1
Query: 1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAG-------RLRRD-----------------------RPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKIS-APDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISVLCLSSALR--SAVRVMVTVWKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSIGFDAGGA-------RHCLRTINQPLISVR----DLAH 1074
R VA+GFSQ GED++ET APV T+R + +AA+ + +DV +AYLN +EEE+F++ PP ++ V RLRKSLYGLKQS R WN + LV IG + C Y ++ G T V +YVDDL++AG + RD + +G+ +++ I ++LE Y E + +TP E S + D + N+++YR +GSL+Y +T +RPD + V RR+E P + D+ KR+ ++ +L+ S + + + DS + ++ S L G ++ SRKQ SSTEAEYIAA A KE ++ R+LL + G + C+R I R D+ H
Sbjct: 401 RLVARGFSQAYGEDYYETFAPVVKHETIRVLLCIAAQKGLHVRHLDVKSAYLNGQLEEEIFLEQPPGFQKSGQESK-VLRLRKSLYGLKQSARAWNKRATEALVQIGFRPGKAEHCLYTRKERNGTTTY-VLLYVDDLLVAGTSTKITEEVSRDLQEYFDIKDLGDVNHYLGVQIKRQADGSSLLNQKGKITKILEEYGLLEPKPAATPMETNFLNSRSDDSAKIPNNNKYRKAIGSLLYIATVSRPDIATAVGILCRRVEKPTKRDWEAVKRVMRYLAFTINKSLQLSSTDTMELECFVDSDWAGDKTDRKSTSGYVFCLGKGTVAWSSRKQTSVATSSTEAEYIAASHASKEVLWFRQLLKDMNIPRKGPTKINEDNQGCIRLIESDRCGARTKHIDICH 800
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A5S6Q3I8_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6Q3I8_TRIMR) HSP 1 Score: 179 bits (454), Expect = 2.950e-47 Identity = 133/428 (31.07%), Postives = 208/428 (48.60%), Query Frame = 1
Query: 1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAGR---------LRRDRPNGTRTISE--------------GSY-------IREVLERYDFDECRGVSTPAE-GKVKISAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRI--FVISVLCLSSALRSAVRVMVTVWKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSIGFDAGGARHCLRTINQPLISVRD--LAHTAGQNTSECVGTEFESGFGKECWH*NICRPAINLL 1179
R VA+GFSQ GED+ ET APV T+R + SLAA + +DV AAYLN+P+EEEL+VK PP ++ V LRKSLYGLKQS R WN D L +G +++ D C + ++ G ++ +YVDDL++ G ++ D+ T+ + E GS I ++LE+Y EC+ TP E G + ++ N+ +YR +GSL+Y +T +RPD + V R +E P D+ KR+ ++ + ++ L SA + + + D+ + ++ + L ++ SRKQ V SSTEAEY+A A +E ++LR+LL +G I+V+D + H Q + V +E +G H ++C + L
Sbjct: 94 RLVARGFSQRYGEDYDETFAPVVKHDTVRVLLSLAAAQKLHVRHLDVKAAYLNSPLEEELYVKQPPGFEVQGQEHK-VLLLRKSLYGLKQSARAWNKMATDTLTSLGFEQAMADHCLFSKKEKNGSRTYIL-IYVDDLLVVGATPKITKEVGIQMDKFFQTKDLGEVKNYLGIQIEREGDGSILLHQRNKIEQLLEQYGLMECKPAPTPMETGFLSVNQESPPMPDNT-KYRQAIGSLLYVATVSRPDIAAPVGFLCRHVEKPTEADWKAVKRVMRYLAATKYMTLRLSSAGGIDLQCYVDADWAGDKADRKSTTGFVFQLGKNTVAWSSRKQSVVALSSTEAEYLAVSHACRELLWLRQLLKDLG-----------------IAVKDPTIIHEDNQACIKMVNSER---YGARTKHVDVCHHHVRDL 498
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A2G8RW53_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RW53_9APHY) HSP 1 Score: 184 bits (466), Expect = 3.480e-47 Identity = 132/380 (34.74%), Postives = 187/380 (49.21%), Query Frame = 1
Query: 1 RPVAQGFSQVEGEDFF--ETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAG------------------------------RLRRDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKI------SAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISVLCLSSALRSAVRVMVTVWKDSLMPI--------GRKMSRNESPQQD--TLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSI 996
R VAQGFSQV G D+ ET APV+ + ++RTI +LAA HD+EL +DV +AYLN +EE +++ PP S V RL+K+LYGLKQ+GR W T+ ++ +G R D ++ R+ GE+ ++VA VDDL IAG +RRD T IS+ SYI + R++ ++ +S P + + S P + YR VGSLMYA+ G RPD ++ V ++ M++P R + KR+ R + V+ D + G M S TL+GGAIS S+KQ V SSTEAEYIA A KEA++LR +L +
Sbjct: 1877 RLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILALAARHDWELRQMDVKSAYLNGTLEETVYMHQPPSFS-MPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMLQMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTIAGTSDLVNAFAADIKQRFEMSDLGNLHWILGIEVRRDCQARTIAISQRSYIDTTVSRFNLEDAAPLSIPLQPGSPLGQHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDVTFAVTALSQFMQNPGRAHWDAIKRVL---------RYLKGTRELWLVYGDDNNGLHSFSDADWGSSMEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLADV 2244 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig47207.11741.1 >prot_H-paniculata_contig47207.11741.1 ID=prot_H-paniculata_contig47207.11741.1|Name=mRNA_H-paniculata_contig47207.11741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=359bp MSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDback to top mRNA from alignment at H-paniculata_contig47207:66..1469- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig47207.11741.1 ID=mRNA_H-paniculata_contig47207.11741.1|Name=mRNA_H-paniculata_contig47207.11741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1404bp|location=Sequence derived from alignment at H-paniculata_contig47207:66..1469- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig47207:66..1469- >mRNA_H-paniculata_contig47207.11741.1 ID=mRNA_H-paniculata_contig47207.11741.1|Name=mRNA_H-paniculata_contig47207.11741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2154bp|location=Sequence derived from alignment at H-paniculata_contig47207:66..1469- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |