mRNA_H-paniculata_contig4706.11715.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4706.11715.1 vs. uniprot
Match: D7G2B3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B3_ECTSI) HSP 1 Score: 349 bits (896), Expect = 1.140e-111 Identity = 178/242 (73.55%), Postives = 194/242 (80.17%), Query Frame = 1
Query: 1 MDETRALLDQLMGRERDVPVAKRTNRKRRVWDDDICKPYLCGLCPYVDFKNTRSDLGEHPPNQDHDPEVKAEWEGLSEDEKDNYGYERELMGYLEDLILACDRRVEKNKERLKLEQGDDKAKDGQISRLIELERVMSEKMEQSEKQAEEGLVDEAQALLAEVARMKEHKSKLERQMAKENENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKACRDKFKELKEKFANKP 726
MDE RALL+QLMGRERD+PV KRTNR R++WDDDICKPYLCGLCPYVDF+NTRSDLGEHPPNQDHDP+VKA+W+ LSEDEKD YGYERELM YL DL++ CDRRVEKNKERL+LEQGDD KD QI+RLI++ERVMSEKME MA++NENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKA RDK KELKEKF NKP
Sbjct: 1 MDEARALLEQLMGRERDIPVDKRTNRSRKIWDDDICKPYLCGLCPYVDFRNTRSDLGEHPPNQDHDPDVKAQWDKLSEDEKDKYGYERELMTYLMDLVVTCDRRVEKNKERLRLEQGDDNVKDSQIARLIDMERVMSEKMELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAEKNENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKFENKP 242
BLAST of mRNA_H-paniculata_contig4706.11715.1 vs. uniprot
Match: A0A835ZA45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA45_9STRA) HSP 1 Score: 249 bits (637), Expect = 7.260e-74 Identity = 135/239 (56.49%), Postives = 174/239 (72.80%), Query Frame = 1
Query: 1 MDETRALLDQLMGRERDVPVAKRTNRKRRVWDDDICKPYLCGLCPYVDFKNTRSDLGEHPPNQDHDPEVKAEWEGLSEDEKDNYGYERELMGYLEDLILACDRRVEKNKERLKLEQGDDKAKDGQISRLIELERVMSEKMEQSEKQAEEGLVDEAQALLAEVARMKEHKSKLERQMAKENENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKACRDKFKELKEKFA 717
MDETRALLDQLMGRERDVP+ KRTNRKR DDD+CK +L GLCPY F NT+SDLGEHP ++ + ++K +E +E++ YGYER+L+ LE+L+ DR+VE+N+ER LE + + L++LE + EK E+SEK AE+G +DEAQA L EVA M++ K+ +E+Q + KR+IVCEVSGNIM SSA+NEERI CHFQGKQYLGWKACR+K KEL+EKF+
Sbjct: 1 MDETRALLDQLMGRERDVPLDKRTNRKRHFTDDDVCKFHLVGLCPYALFNNTKSDLGEHPNGEEDNDDMKEMYEARPLEERERYGYERQLLRCLEELVAGVDRKVERNRERCNLENSGSGIPEDALQELLKLEVGIKEKTEESEKLAEDGEIDEAQARLEEVASMQQKKNSIEKQYTS-IKTVKRNIVCEVSGNIM-------SSADNEERIMCHFQGKQYLGWKACREKVKELREKFS 231
BLAST of mRNA_H-paniculata_contig4706.11715.1 vs. uniprot
Match: A0A6H5K5W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W6_9PHAE) HSP 1 Score: 184 bits (466), Expect = 6.670e-51 Identity = 97/107 (90.65%), Postives = 102/107 (95.33%), Query Frame = 1
Query: 406 MSEKMEQSEKQAEEGLVDEAQALLAEVARMKEHKSKLERQMAKENENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKACRDKFKELKEKFANKP 726
MSEKME SEKQAEEGLVDEAQALLAEVARM+EHKS +E+QMA++NENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKA RDK KELKEKF NKP
Sbjct: 63 MSEKMELSEKQAEEGLVDEAQALLAEVARMREHKSAIEKQMAEKNENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKFENKP 169
BLAST of mRNA_H-paniculata_contig4706.11715.1 vs. uniprot
Match: A0A7S3UYV8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYV8_HETAK) HSP 1 Score: 186 bits (471), Expect = 1.690e-48 Identity = 108/237 (45.57%), Postives = 149/237 (62.87%), Query Frame = 1
Query: 1 MDETRALLDQLMGRERDVPVAKRTNRKRRVWDDDICKPYLCGLCPYVDFKNTRSDLGEHPPNQDHDPEVKAEWEGLSEDEKDNYGYERELMGYLEDLILACDRRVEKNKERLKLEQGDDKAKDGQISRLIELERVMSEKMEQSEKQAEEGLVDEAQALLAEVARMKEHKSKLERQMAKENENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKACRDKFKELKEK 711
M E R +LDQLMG+ R+V + + + R D D+CK +LCGLCPY FKNTRSDLG HP +++ D + K E++ LS+ EK YGYE+ L+ +L L+ CD+R+E K R Q D ++ R+ LER M++ +SE AEEG +DEAQ L+ EV R+K K + +E KR IVC++SGN+M SS +N+ERI HFQGK Y+GWKA RDK E++E+
Sbjct: 17 MSEARKMLDQLMGKARNVNLGEEV-KARHFSDPDVCKFHLCGLCPYEMFKNTRSDLGGHPEDEEDDDKCKEEYDKLSDSEKRRYGYEKNLLEFLRRLVRQCDQRIESQKAR----QLDTTVSQEEVERIAALERQMADLTAKSEALAEEGEIDEAQKLIEEVERLKIQKEAIANAPMRE----KRMIVCDISGNLM-------SSTDNDERIDAHFQGKLYIGWKAVRDKVAEIEER 237
BLAST of mRNA_H-paniculata_contig4706.11715.1 vs. uniprot
Match: A0A7S1CQQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQQ5_9STRA) HSP 1 Score: 178 bits (451), Expect = 3.880e-47 Identity = 106/249 (42.57%), Postives = 155/249 (62.25%), Query Frame = 1
Query: 13 RALLDQLMGRERDVPVAKRTNRKRRVWDDDICKPYLCGLCPYVDFKNTRSDLGEHPPNQDHDPEVKAEWEGLSEDEKDNYGYERELMGYLEDLILACDRRVEKNKERLKLEQGDDKAKDGQISRLIELERVMSEKMEQSEKQAEEGLVDEAQALLAEVARMKEHKSKLERQMAKENENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKACRDKFKELKEKFANKPPPIRGYDPRER 759
R LLD+LMG+ERDVPV RTN+KR +DDD+CK +L G+CP+ KNT+SDLG H + HD + KAEW+ LS E+ YGY+ E L+ L+ CDRRV +N+ R+ EQG + D + R++++E MSE +Q+E EEG VDEA+A LA + +K K +E MA+ K +VC++SG N LSS ++E+R+R HF+G+ Y+G+K R+ +++ E+ + G P R
Sbjct: 51 RGLLDELMGKERDVPVHLRTNKKRHFYDDDVCKHFLVGICPFALLKNTKSDLGTH--DLAHDDKCKAEWDKLSPAEQQKYGYDIETARLLDQLVHDCDRRVARNEARIG-EQGAVRLTDEEAKRMVDMEVEMSELSKQAESLGEEGKVDEAEAALARIEELKRTKQAIE--MARGG-GEKTMMVCKISG-------NYLSSTDSEDRLRAHFEGRLYIGFKTIRETHQKMLEELRKSGRSLAGPGPSAR 286
BLAST of mRNA_H-paniculata_contig4706.11715.1 vs. uniprot
Match: A0A7R9UBH9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBH9_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.500e-45 Identity = 100/245 (40.82%), Postives = 155/245 (63.27%), Query Frame = 1
Query: 1 MDETRALLDQLMGRERDVPVAKRTNRKRRVWDDDICKPYLCGLCPYVDFKNTRSDLGEHPPNQDHDPEVKAEWEGLSEDEKDNYGYERELMGYLEDLILACDRRVEKNKERLKLEQGDDKAKDGQISRLIELERVMSEKMEQSEKQAEEGLVDEAQALLAEVARMKEHKSKLERQMAKENEN--SKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKACRDKFKELKEKFANKPP 729
MD R LL+QLMG++R++PV+++ RKR D D+CK +LCGLCP+ F NT+SDLG H N++ DPE++ +++ L E+ YGY R L+ LED+I CDR++E+N+ER+ E+ + +I ++ ++R + + ++ +E A+E V+ A +L EV HK +L+R+ + SKR +VC+V GN M +S + +R+RCHF G+QY GWK CR+K KEL+E PP
Sbjct: 18 MDAQRELLNQLMGKDRNLPVSQQ--RKRHFSDRDVCKHFLCGLCPFELFTNTKSDLGPHAYNEEDDPEMRKQFQALDVQEQLRYGYHRALLRLLEDMIAGCDRKIERNRERVIREEREAVPTPAEIDDVLAVDRQVEDFVDSAEALAKELDVEAAWDMLGEV-----HKLQLDREKLLTGGDMLSKRTVVCDVCGNFM-------TSTDGVDRLRCHFAGRQYQGWKLCREKVKELRELLRLGPP 248
BLAST of mRNA_H-paniculata_contig4706.11715.1 vs. uniprot
Match: A0A6U1IEU4_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A6U1IEU4_9CHLO) HSP 1 Score: 174 bits (442), Expect = 1.840e-45 Identity = 109/244 (44.67%), Postives = 137/244 (56.15%), Query Frame = 1
Query: 1 MDETRALLDQLMGRERDVPVAKRTNRKRRVWDDDICKPYLCGLCPYVDFKNTRSDLGEHPPNQDHDPEVKAEWEGLSEDEKDNYGYERELMGYLEDLILACDRRVEKNKERLKLEQGDDKAKDGQISRLIELERVMSEKMEQSEKQAEEGLVDEAQALLAEVARMKEHKSKLERQMAKENENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKACRDKFKELKEKFANKPPP 732
MD TR LLD+LMG+ERDVP+ +RT R RR D D+CK LCGLCPY FKNTRSDLG D EVKAEW+ L E E+ Y YE ELMG LE L DR++++ K+R + E D L EL+ M E +E++E+ EEG VD AQ + + K RQ + VC++ G M +S +NE R R H GKQYLGWKA R+K EL++K P P
Sbjct: 17 MDMTRQLLDELMGKERDVPLERRTGRARRFDDPDVCKHDLCGLCPYSLFKNTRSDLGVCKWEFHGDEEVKAEWDALEERERSRYPYEHELMGVLEQLTREMDRKIQRAKDRAEKESQPRPLSDADKVALDELDTKMKEALEKAEQLGEEGDVDGAQVFSQQAEAFAKQKESKHRQATQPERTM---TVCDICGVFM-------NSTDNEARRRDHLSGKQYLGWKAIREKLDELQKKLRGVPMP 250
BLAST of mRNA_H-paniculata_contig4706.11715.1 vs. uniprot
Match: A0A061R874_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R874_9CHLO) HSP 1 Score: 172 bits (437), Expect = 1.190e-44 Identity = 109/244 (44.67%), Postives = 139/244 (56.97%), Query Frame = 1
Query: 1 MDETRALLDQLMGRERDVPVAKRTNRKRRVWDDDICKPYLCGLCPYVDFKNTRSDLGEHPPNQDHDPEVKAEWEGLSEDEKDNYGYERELMGYLEDLILACDRRVEKNKERLKLEQGDDKAKDGQISRLIELERVMSEKMEQSEKQAEEGLVDEAQALLAEVARMKEHKSKLERQMAKENENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKACRDKFKELKEKFANKPPP 732
MD TRALLD+LMG+ERDVP+ RTN+ RR D+DICK LCGLCPY FKNTRSDLG D +VK +W L E EK Y YE ELM LE L+ DR++ + K+R + E + L +L+ M E +E++EK EEG VD AQ + + + K RQ+ + VCEV G ++S +NE R R H GKQYLGWKA R+K EL++K A P P
Sbjct: 21 MDMTRALLDELMGKERDVPLDVRTNKARRFDDEDICKYDLCGLCPYSLFKNTRSDLGICKWEVHGDEQVKEQWSKLEEKEKARYPYEHELMTELEQLVREMDRKIARAKDRAEKESAPRPLSEADKKALDDLDAKMKEALEKAEKLGEEGDVDGAQVFSQQAESLAKQKETQYRQLTQPERTMS---VCEVCG-------VFINSTDNEARRRDHLAGKQYLGWKAIREKLAELQKKLAGVPAP 254
BLAST of mRNA_H-paniculata_contig4706.11715.1 vs. uniprot
Match: A0A7S2RM59_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RM59_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.700e-42 Identity = 101/244 (41.39%), Postives = 150/244 (61.48%), Query Frame = 1
Query: 1 MDETRALLDQLMGRERDVPVAKRTNRKRRVWDDDICKPYLCGLCPYVDFKNTRSDLGEHPPNQDHDPEVKAEWEGLSEDEKDNYGYERELMGYLEDLILACDRRVEKNKERLKLEQGDDKAK------DGQISRLIELERVMSEKMEQSEKQAEEGLVDEAQALLAEVARMKEHKSKLER---QMAKENENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKACRDKFKELK 705
MDE R LLD+LMG+ER++ ++ +R++ D D+CK Y+CGL PY FKNT+SDLG P ++ D + K +WE LS++EKD YGYE ELM +LE L+ CD +V+++ ER+ E D+ A+ D ++ R+ E+E M + + E G + EA A L ++ ++LE Q A+++ + IVCEVSGN M +S++N +R+RCHF+GKQY GW+ RDK LK
Sbjct: 19 MDEQRKLLDELMGQERNLNEDEKLHRQKHFSDPDVCKYYICGLSPYNLFKNTKSDLG--PYDKVFDDDCKRQWEELSQNEKDKYGYEYELMLFLEKLVGQCDSKVKRHSERVNQEHSDELARVETALVDRELQRIGEIELDMPRLEAEVVQLGEAGRLGEALAALQRAEMLRSEMNQLETKAIQAARDSTGRRHMIVCEVSGNFM-------NSSDNGDRLRCHFEGKQYQGWRKIRDKLAVLK 253
BLAST of mRNA_H-paniculata_contig4706.11715.1 vs. uniprot
Match: A0A7S0DTB3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DTB3_9EUKA) HSP 1 Score: 162 bits (409), Expect = 3.050e-41 Identity = 93/260 (35.77%), Postives = 147/260 (56.54%), Query Frame = 1
Query: 1 MDETRALLDQLMGRERDVPVAKRTNRKRRVWDDDICKPYLCGLCPYVDFKNTRSDLGEHPPNQDHDPEVKAEWEGLSEDEKDNYGYERELMGYLEDLILACDRRVEKNKERLKLEQGDD----KAKDGQISRLIELERVMSEKMEQSEKQAEEGLVDEAQALLAEVARMKEHKSKLERQMAKENENSKRDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKACRDKFKELKEKFANKPP---PIRGYDPRER 759
MD RALLD LMG ER+ + R +R+ WD +CK YLCGLCPY TRSD+GEH +HD K EWE L+ +E+ YGYE +L+ ++E L+ CD R+ +K RL+ ++ + K + + ++++L M + + ++E EEG V+E+ + A+++ +K+ + Q+ + +VCE+SG N+LSS + E+R H+ G+ Y GW R+K KE++E +P P+R D R R
Sbjct: 1 MDAARALLDSLMGAERNAALEDREKLRRKFWDRTVCKHYLCGLCPYELLAQTRSDVGEHKTAAEHDLRCKQEWESLTAEERKEYGYEYDLLEWMEQLVRQCDERIAMSKRRLEEKEEEKPIEKKLSEEEAEKVLQLRAQMDQLIAKAENLGEEGKVEESMQITAQISGLKKQIENMT-QLQLGPSTDRALVVCEISG-------NLLSSTDTEDRKARHYAGRHYQGWTKVREKLKEMRETVGPRPTGWKPMRSKDGRRR 252 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4706.11715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4706.11715.1 >prot_H-paniculata_contig4706.11715.1 ID=prot_H-paniculata_contig4706.11715.1|Name=mRNA_H-paniculata_contig4706.11715.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=353bp MDETRALLDQLMGRERDVPVAKRTNRKRRVWDDDICKPYLCGLCPYVDFKback to top mRNA from alignment at H-paniculata_contig4706:4524..12626- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4706.11715.1 ID=mRNA_H-paniculata_contig4706.11715.1|Name=mRNA_H-paniculata_contig4706.11715.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8103bp|location=Sequence derived from alignment at H-paniculata_contig4706:4524..12626- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4706:4524..12626- >mRNA_H-paniculata_contig4706.11715.1 ID=mRNA_H-paniculata_contig4706.11715.1|Name=mRNA_H-paniculata_contig4706.11715.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2118bp|location=Sequence derived from alignment at H-paniculata_contig4706:4524..12626- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |