mRNA_H-paniculata_contig470.11705.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig470.11705.1
Unique NamemRNA_H-paniculata_contig470.11705.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig470.11705.1 vs. uniprot
Match: D7G7U0_ECTSI (Ephrin_rec_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U0_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 8.220e-117
Identity = 188/266 (70.68%), Postives = 214/266 (80.45%), Query Frame = 1
Query:    1 GRLLEAAVLPGTFFLAWHAWGTLPP-----LVSATVEQCKLDCA----AEYTTSEIMNSSSWSMWDTQRLVGPTKPSVELNATYPHAKAPFPLPFYSFCQLGCSYFFSASPQNTTCKGLCDDVYARNVSVGISDYAEKARLECRDGCDIAVLRCQSGYSCVDGVMSKCAAGTYRNTSYEMVTSCLQCPKGTYREGEKGRGVQDCDXXXXXXXXXXXXXXXXXXXXXXXXGLYAELEGTAECSCITADSCIPEWQNYQRNSVPFVGR 771
            G LL A V+P TF LAW AW TL        VSAT+EQC LDCA    AE      +N  SWS+WDTQRLVGPT+P+ E+NATYP+A+AP PLPF+SFCQLGCSYFF+ SP+NTTC GLCDD Y RNVSVGI+DYAEKARLECRDGC+IAVLRCQ GYSC  GVMS+C+ GTYRNTSY+M+ +C QCPKGTYR   KG GV D  XXXXXXXXXXXXXXXXXXXXXXXX  YA+ EGTAECSC+T DSC+PEWQN+QR+S+P +GR
Sbjct:    5 GGLLRAFVVPTTFALAWQAWTTLTASNSSLFVSATLEQCHLDCAGNTTAELVADAALNGGSWSVWDTQRLVGPTEPASEVNATYPYARAPLPLPFHSFCQLGCSYFFAGSPRNTTCSGLCDDFYVRNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCAAGVMSECSPGTYRNTSYDMINTCTQCPKGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAKEEGTAECSCVTEDSCLPEWQNFQRDSMPHIGR 270          
BLAST of mRNA_H-paniculata_contig470.11705.1 vs. uniprot
Match: A0A7S3HQK9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQK9_9STRA)

HSP 1 Score: 146 bits (368), Expect = 7.500e-39
Identity = 109/254 (42.91%), Postives = 138/254 (54.33%), Query Frame = 1
Query:   58 WGTLPPLVSATVEQCKLDCAAEYTTSEIMNSSSWSMWDTQRLVGPTKPSVELNATYPHAKAPFPLPFYSFCQLGCSYFFSASPQNTTCKGLCDDVYARNVSVGISDYAEKARLECRDGCDIAVLRCQSGYSCVDGVMSKCAAGTYRNT-------SYEMVTSCLQCPKGTYREGEKGRGVQDCDXXXXXXXXXXXXXXXXXXXXXXXXGLYAELEGTAECSCITADSC---------IPEWQNYQRNSVPFVGR 771
            W  L   V+  V+ C+ +C +                   RL GPTK  ++    +P A A FP     FCQLGC  F++  P+NTTCK LC+  Y   ++VG +D AE+A+LEC+DGC+IA+  CQ+GY C +G+M  C AGTYR         + E  TSC +CP G YR   KG+      XXXXXXXXXXXXXXXXXXXXXXXX       G   C CIT  SC              +Y R S+PF+GR
Sbjct:   21 WTDLDWQVNGQVDLCQSNCVSA-----------------DRLTGPTK--MQQTKQHPWAMAAFPTKQKGFCQLGCQLFYTEVPKNTTCKRLCNYFYRYKITVGYNDLAEEAKLECQDGCEIALQVCQAGYYCDEGIMLPCPAGTYREPVTDVSILALEKATSCTKCPYGRYRSTNKGKSADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQRLCKCITPGSCGSIIDDNVVFSNGVDYYRESIPFIGR 255          
BLAST of mRNA_H-paniculata_contig470.11705.1 vs. uniprot
Match: A0A835ZBR7_9STRA (Ephrin_rec_like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR7_9STRA)

HSP 1 Score: 140 bits (352), Expect = 4.420e-37
Identity = 96/170 (56.47%), Postives = 114/170 (67.06%), Query Frame = 1
Query:  265 FCQLGCSYFFSASPQNTTCKGLCDDVYARNVSVGISDYAEKARLECRDGCDIAVLRCQSGYSCVDGV-MSKCAAGTYRNTSYEMVTSCLQCPKGTYREGEKGRGVQDCDXXXXXXXXXXXXXXXXXXXXXXXXGLYAELEGTAECSCITADSCIPEWQNYQRNSVPFVGR 771
            FC+ GC+YF+S+SP   +C   CD++Y +  S  +SD+AEKARL+CRDGC I    CQ GY C     M +C  GTYRN S   VT C+ CP G YRE   G G+ D  XXXXXXXXXXXXXXXXXXXXXXXX LY  +EG A C+ IT DS  PE+QN    S PF+GR
Sbjct:   35 FCEAGCAYFYSSSPTLQSCDVNCDEMYRQRTSFNVSDWAEKARLDCRDGCRIGFRVCQPGYKCEHAHGMVECEPGTYRNASDADVTQCIACPAGHYREAPGGAGLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXLYTLVEGQAACANITYDSGNPEFQNLLNESEPFLGR 204          
BLAST of mRNA_H-paniculata_contig470.11705.1 vs. uniprot
Match: A0A7S1TV74_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV74_9STRA)

HSP 1 Score: 140 bits (354), Expect = 8.680e-37
Identity = 103/228 (45.18%), Postives = 130/228 (57.02%), Query Frame = 1
Query:   58 WGTLPPLVSATV------EQCKLDCAAEYTTSEIMNSSSWSMWDTQRLVGPTKPSVELNATYPHAKAPFPLPFYSFCQLGCSYFFSASPQNTTCKGLCDDVYARNVSVGISDYAEKARLECRDGCDIAVLRCQSGYSCVDGVMSKCAAGTYRNTSYEMVTSCLQCPKGTYREGEKGRGVQDCDXXXXXXXXXXXXXXXXXXXXXXXXGLYAELEGTAECSCITADSCI 723
            W  L PL +A +      + CK DC+                 D  R VGPT+P       +P   AP P P+  FCQ GCS FF + P  T C+  CD +Y  +V+V  +D AE ARLECRDGC++ +LRCQ+GY C  G M +C  GTYR+  +  V +C+ CP+G YR   +GR ++   XXXXXXXXXXXXXXXXXXXXXXXX       G A C CIT  S +
Sbjct:    2 WRLLLPLAAALLPAAADLDHCKADCS-----------------DAARPVGPTRPPNTRG--HPWFPAPNPNPYLQFCQTGCSLFFESYPVLTDCQAECDRIYRYDVTVAYNDQAEVARLECRDGCEMGLLRCQAGYYCTAGSMLQCPIGTYRDVDFAAVEACVDCPRGRYRSDPRGRYLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLALCKCITTKSFV 210          
BLAST of mRNA_H-paniculata_contig470.11705.1 vs. uniprot
Match: A0A7S0XEG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEG6_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.420e-29
Identity = 94/186 (50.54%), Postives = 111/186 (59.68%), Query Frame = 1
Query:  178 RLVGPTKPSVELNATYPHAKAPFPLPFYSFCQLGCSYFFSASPQNTTCKGLCDDVYARNVSVGISDYAEKARLECRDGCDIAVLRCQSGYSCVDGVMSKCAAGTYRNT-------SYEMVTSCLQCPKGTYREGEKGRGVQDCDXXXXXXXXXXXXXXXXXXXXXXXXGLYAELEGTAECSCITAD 714
            RL GP KP      T+P   A FP    +FC+LGC YFFS    N TC   C   Y    + G SD AE A+LEC DGC+IA+  CQ+GY CV+G M+ C AG YR +       + E V +C+ CP G YR  +KGR   D  XXXXXXXXXXXXXXXXXXXXXXXX      EG+  C CIT +
Sbjct:   44 RLFGPIKPPD--TRTHPWKVAQFPSTTTAFCKLGCQYFFSYYSNNNTCINQCKYQYRYQATTGYSDSAELAKLECLDGCNIALSICQAGYYCVNGNMTVCPAGKYRESVSDLSLITLEKVHTCINCPYGRYRALDKGRSANDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGSRYCKCITTE 227          
BLAST of mRNA_H-paniculata_contig470.11705.1 vs. uniprot
Match: A0A7S2CHA6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHA6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.070e-29
Identity = 66/163 (40.49%), Postives = 87/163 (53.37%), Query Frame = 1
Query:  178 RLVGPTKPS------------VELNATYPH--AKAPFPLPFYSFCQLGCSYFFSAS-----PQN-------------TTCKGLCDDVYARNVSVGISDYAEKARLECRDGCDIAVLRCQSGYSCVDGVMSKCAAGTYRNTSYEMVTSCLQCPKGTYREGEKGR 570
            RLVGPT+PS            + L+ T PH  A++P P P+  FCQ+GC+Y+++       PQ              + C   C+  +  +++ G SD AE ARLEC DGC IA LRCQ GYSC +G M+ C  GTYR+  Y  V  C  CP G YR+   GR
Sbjct:  142 RLVGPTRPSDSDVYLFGLHETIHLDLTRPHPWARSPEPNPYMKFCQIGCTYYYNQEQWGIYPQREVPSDVVENWNTLSACLARCNHTFRYDITTGYSDIAEMARLECWDGCQIANLRCQPGYSCFNGDMNPCKPGTYRHNEYTRVEQCYDCPNGRYRDAVGGR 304          
BLAST of mRNA_H-paniculata_contig470.11705.1 vs. uniprot
Match: A0A7S1ZTF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZTF7_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.080e-27
Identity = 89/205 (43.41%), Postives = 117/205 (57.07%), Query Frame = 1
Query:  256 FYSFCQLGCSYFFSA--SPQNTT-CKGLCDDVYARNVSVGISDYAEKARLECRDGCDIAVLRCQSGYSC-------------------------VDGVMSKCAAGTYRNTSYEMVTSCLQCPKGTYREGEKGRGVQDCDXXXXXXXXXXXXXXXXXXXXXXXXGLYAELEGTAECSCITADSC----IPEWQNYQ-RNSVPFVGR 771
            +Y FC++GC+ FFS+   P + + C   CD +Y  N++VG +D  E +RLECRDGC +A+ RCQ GY C                           G MS C AG YR+ SY+ +  C+ CP G +RE  KG+ +    XXXXXXXXXXXXXXXXXXXXXXXX         A C CIT+DSC    +P   N + R ++P++GR
Sbjct:   96 YYKFCEVGCTLFFSSISDPMHLSECTHKCDQIYQYNITVGYNDLMEVSRLECRDGCQMALKRCQPGYFCSQVSLLNDDENSTLGPKSHGRDTRYTGGYMSHCPAGKYRDFSYDAIEMCVDCPPGRFREDTKGKSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFCKCITSDSCKKEQLPSPANSEKRETIPYIGR 300          
BLAST of mRNA_H-paniculata_contig470.11705.1 vs. uniprot
Match: A0A7S1FSZ0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FSZ0_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.230e-26
Identity = 99/253 (39.13%), Postives = 135/253 (53.36%), Query Frame = 1
Query:  109 DCAAEYTTSEIMNSSSWSMWDTQRLVGPTKPSVELNATYPHAKA---PFPLPFYSFCQLGCSYFFSASP---QNTTCKGLCDDVYARNVSVGISDYAEKARLECRDGCDIAVLRCQSGYSCVD---------------------GVMSKCAAGTYRNTSYEMVTSCLQCPKGTYREGEKGRGVQDCDXXXXXXXXXXXXXXXXXXXXXXXXGLYAELEGTAECSCITADSC----IPEWQNYQ-RNSVPFVGR 771
            +C ++  +   +NS+         L   T PS        H K     +P  ++  CQLGC+ FFS      Q ++C  LCDD YA N++V  +D  E  RLECRDGC +A++RCQ GY C+                      G M +C  G+YR+ SY  V +C+ CP G +RE  +G  ++   XXXXXXXXXXXXXXXXXXXXXXXX  +    G   C CIT  +C    +P+  + + RN+VP+VGR
Sbjct:  185 ECGSKVNSRSFVNST---------LFLSTLPSNATGEIIVHKKTLSPSYPDQYFRACQLGCTLFFSLRENPKQLSSCLSLCDDKYAYNITVSYNDLMELVRLECRDGCHMALMRCQPGYFCLQPSTTLDDDGKHHLSSTSLPNGGSMHECLPGSYRDVSYHAVDTCVPCPPGRFREETRGLSMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFTTEPGRHVCKCITPQACDKEQLPDPADAEKRNTVPYVGR 428          
BLAST of mRNA_H-paniculata_contig470.11705.1 vs. uniprot
Match: A0A7S2SQ56_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ56_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.290e-22
Identity = 96/232 (41.38%), Postives = 122/232 (52.59%), Query Frame = 1
Query:  175 QRLVGPTKPSVELNATYPHA--KAPFPLPFYSFCQLGCSYFFSAS--PQNTTCKGLCDDVYARNVSVGISDYAEKARLECRDGCDIAVLRCQSGYSC----------VDGV--------MSKCAAGTYRNTSYE----------------MVTSCLQCPKGTYREGEKGRGVQDCDXXXXXXXXXXXXXXXXXXXXXXXXGLYAELEGTAECSCITADSCIPEWQNYQRNSV 756
            +R +GPT+PS   +  Y HA  K  +P  +  FC+ GC++F+S    P N TCK  C   YA   SVG +D A  ARLEC DGCD+A++RC+ GYSC          VD          M+ C  GT+R   Y                  V SC  CP G YR+  KG+      XXXXXXXXXXXXXXXXXXXXXXXX         A C CIT  SC  E ++++++ +
Sbjct:   86 RRPIGPTRPSEPRDHPYFHAVGKDAWPNTYAKFCEAGCTFFYSEPEYPSNITCKQRCSSTYAYEGSVGENDMAMVARLECYDGCDLALMRCRPGYSCDWPSTTGLGAVDAAAGWTRTANMTACPLGTWRGVLYNETSGSQTDEDLYSPGISVDSCRDCPSGRYRDFPKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATCKCITYWSCGDE-ESFKQSPI 316          
BLAST of mRNA_H-paniculata_contig470.11705.1 vs. uniprot
Match: K0QZJ0_THAOC (Ephrin_rec_like domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZJ0_THAOC)

HSP 1 Score: 98.6 bits (244), Expect = 1.160e-19
Identity = 97/243 (39.92%), Postives = 130/243 (53.50%), Query Frame = 1
Query:   76 LVSATVEQCKLDCAAEYTTSEIMNSSSWSMWDTQRLVGPTKPSVELNATYP-HAKAPFPLPFY-SFCQLGCSYFF----SASPQNTT------CKGLCDDVYA-RNVSVGISDYAEKARLECRDGCDIAVLRCQSGYSC------------VDGVMSKCAAGTYRNTSYEMVTSCLQCPKGTYREGEKGRGVQDCDXXXXXXXXXXXXXXXXXXXXXXXXGLYAELEGTAECSCITADSCIPE 729
            +V AT EQC++DC ++  T     +  W   D      P + ++ L   YP HA A      Y +FC+LGC+YFF    S  P++ +      C   C++ +   + +   +D    ARLECRDGC +A+ RCQ GY C              G M+ C  GTYR+  Y  V +C+ CP   +RE  KGR      XXXXXXXXXXXXXXXXXXXXXXXX  +A  +  + C+CIT D+C  E
Sbjct:  153 VVLATEEQCRIDCNSDDRTP----TRPWHEQD------PLRNALRLTRPYPYHAAADDDERDYPAFCRLGCNYFFVPESSDDPEDESKSTLDQCLERCEEEFEYTSTTPPYNDLVAIARLECRDGCLLALRRCQPGYYCSQVSFRDGNGTYAGGQMTPCPPGTYRDVDYGAVEACVPCPPNHFREDVKGRSASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAS-QPASYCTCITPDACARE 384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig470.11705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G7U0_ECTSI8.220e-11770.68Ephrin_rec_like domain-containing protein n=1 Tax=... [more]
A0A7S3HQK9_9STRA7.500e-3942.91Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A835ZBR7_9STRA4.420e-3756.47Ephrin_rec_like domain-containing protein n=1 Tax=... [more]
A0A7S1TV74_9STRA8.680e-3745.18Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0XEG6_9STRA1.420e-2950.54Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S2CHA6_9STRA3.070e-2940.49Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1ZTF7_9STRA3.080e-2743.41Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S1FSZ0_9STRA1.230e-2639.13Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2SQ56_9STRA3.290e-2241.38Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
K0QZJ0_THAOC1.160e-1939.92Ephrin_rec_like domain-containing protein (Fragmen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig470contigH-paniculata_contig470:15890..17704 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score302.0
Seed ortholog evalue2.2e-79
Seed eggNOG ortholog2880.D7G7U0
Hectar predicted targeting categoryother localisation
EggNOG OGs2D7CU@1,2S58T@2759
Ec32 ortholog descriptionInsulin-like growth factor binding protein, N-terminal
Ec32 orthologEc-06_000310.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size876
Cds size636
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig470.11705.1prot_H-paniculata_contig470.11705.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig470 16031..17605 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930399.5934527-UTR-H-paniculata_contig470:15889..160301622930399.5934527-UTR-H-paniculata_contig470:15889..16030Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig470 15890..16030 +
1691481274.0915911-UTR-H-paniculata_contig470:15889..160301691481274.0915911-UTR-H-paniculata_contig470:15889..16030Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig470 15890..16030 +
1622930399.6605027-UTR-H-paniculata_contig470:17605..177041622930399.6605027-UTR-H-paniculata_contig470:17605..17704Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig470 17606..17704 +
1691481274.1405635-UTR-H-paniculata_contig470:17605..177041691481274.1405635-UTR-H-paniculata_contig470:17605..17704Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig470 17606..17704 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930399.608679-CDS-H-paniculata_contig470:16030..162761622930399.608679-CDS-H-paniculata_contig470:16030..16276Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig470 16031..16276 +
1691481274.1069026-CDS-H-paniculata_contig470:16030..162761691481274.1069026-CDS-H-paniculata_contig470:16030..16276Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig470 16031..16276 +
1622930399.6299527-CDS-H-paniculata_contig470:16804..169481622930399.6299527-CDS-H-paniculata_contig470:16804..16948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig470 16805..16948 +
1691481274.1192904-CDS-H-paniculata_contig470:16804..169481691481274.1192904-CDS-H-paniculata_contig470:16804..16948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig470 16805..16948 +
1622930399.643803-CDS-H-paniculata_contig470:17359..176051622930399.643803-CDS-H-paniculata_contig470:17359..17605Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig470 17360..17605 +
1691481274.1311836-CDS-H-paniculata_contig470:17359..176051691481274.1311836-CDS-H-paniculata_contig470:17359..17605Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig470 17360..17605 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig470.11705.1

>prot_H-paniculata_contig470.11705.1 ID=prot_H-paniculata_contig470.11705.1|Name=mRNA_H-paniculata_contig470.11705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=212bp
MNSSSWSMWDTQRLVGPTKPSVELNATYPHAKAPFPLPFYSFCQLGCSYF
FSASPQNTTCKGLCDDVYARNVSVGISDYAEKARLECRDGCDIAVLRCQS
GYSCVDGVMSKCAAGTYRNTSYEMVTSCLQCPKGTYREGEKGRGVQDCDL
CPVNTYQNVTAATAKIDCIRCPDGLYAELEGTAECSCITADSCIPEWQNY
QRNSVPFVGRM*
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mRNA from alignment at H-paniculata_contig470:15890..17704+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig470.11705.1 ID=mRNA_H-paniculata_contig470.11705.1|Name=mRNA_H-paniculata_contig470.11705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1815bp|location=Sequence derived from alignment at H-paniculata_contig470:15890..17704+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGACGTCTTCTGGAAGCAGCTGTTTTGCCAGGTACATTCTTCTTGGCCTG GCACGCATGGGGCACTTTGCCCCCCCTAGTATCGGCAACGGTGGAGCAAT GCAAATTAGACTGTGCGGCCGAATATACGACGAGTGAGATCATGAACTCC AGTTCGTGGAGCATGTGGGACACGCAGCGCTTGGTGGGCCCCACAAAACC CTCGGTGGAGCTGAACGCCACGTATCCGCACGCCAAGGCTCCATTCCCTC TCCCGTTCTATAGCTTTTGTCAGTTAGGTTGCTCATATTTCTTTTCGGCT TCGCCCCAAAATACGACCTGTAAGGGACTGTGTGACGACGTCTACGCGAG GAACGTGTCCGTTGGGATTAGCGACTACGCCGAGAAGGTAGAGCTATATA CATCCAAGGCCTTCGTGACGACTCTACGGTTGCTGCAGCACAGCACTTGG GCCGGGTTGGCAACGGTTTTAGTACTGGTAGAATTGATTCAGTGCTGCCA TTGAGCTTCCAGGAAGAGGTCGGAATTGTTGGTACAGCAATCCTGTGATG ACCACAAGACACGCCATGGCTCTCGCAATAGTTGGTGGCGTGCGCTAAAC ACTGTGCGTTCGATACACCCGTGTCCTCAAATGTATTAAGTAAGCTGCAC ACACTAAATTAGACTGGAATTATCACTCTTAAGTTTACTTTTACATCTGA CAATTTTCCCCCAAGAAAACACTCGCGAGAAATGACAGCGCTGTATTGGC CTAGGATGGTGTGTTCGTTTATTTTTCAAAGTAACTTCAGTATTCCAACA GAAATTTTAGTTGTAGTGGGCCTGCCTACACGGAAAATGGCACATTTTCA GTGAAAGACGTTGGCAGCCTGACAAGCTAATATCCGGTCTATCCATGGTC GGTTACAATACGTAGGCACGGCTGGAGTGCCGAGATGGGTGCGACATTGC TGTGCTGCGATGCCAGTCAGGATACTCCTGTGTGGACGGTGTGATGTCGA AGTGCGCAGCTGGTACATATCGGAACACGTCGTATGAGATGGTCACGTCT TGCCTACAGGTGGAAAGCAACAGGAATCCTGTACTTGTAGTGAGTGAGCA CAAATCGAGAATGCGGCAATAACTACAACATGCACTTTCTCCAACTTGCC AAACCTTCGTGGATCAGCAGTAGTAACAATCTTCACCGACTGCCTACTGG TTGTACATTGTATAGTGCCATATAAGGCATATAATCTAATCGTAGTGAAC CGCTACAGCTCCTTGCATGCGTTTACTTGGTGAAAATACGTACCCAATGC TCAATAAAGATCTGTGGACCATGATGCCGACGTTCATTCTTCTGTTACAT ATGAGCCCCCTGTGGCTGCGCCCGAAGTTCCAACCCATTGTACTCACTCG CTCTATTTCCGTAATTTTCGCACGCGCGCGTTGCCAACTACTTCTGTGAA TGAACGAACGAATGACGCAGTGTCCAAAAGGCACATACCGAGAAGGAGAG AAGGGCCGTGGCGTGCAAGATTGTGACTTGTGTCCAGTGAACACATACCA GAACGTGACGGCGGCGACTGCAAAAATTGACTGCATTCGGTGCCCTGACG GGTTGTATGCTGAGCTGGAGGGTACAGCGGAATGCAGCTGCATAACCGCA GATAGCTGCATTCCCGAGTGGCAGAATTATCAACGTAATTCCGTGCCGTT TGTCGGCAGGATGTAGAACAGGTTAATATGACTCAAGAGTAGCCATTGCT TGTGATGCTTGCAGCTATATCTCGCGTTGGTATGAAAATAATTTGAAACT CTGCTTATTGCACCA
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Coding sequence (CDS) from alignment at H-paniculata_contig470:15890..17704+

>mRNA_H-paniculata_contig470.11705.1 ID=mRNA_H-paniculata_contig470.11705.1|Name=mRNA_H-paniculata_contig470.11705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1272bp|location=Sequence derived from alignment at H-paniculata_contig470:15890..17704+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACTCCAGTTCGTGGAGCATGTGGGACACGCAGCGCTTGGTGGGCCC
CACAAAACCCTCGGTGGAGCTGAACGCCACGTATCCGCACGCCAAGGCTC
CATTCCCTCTCCCGTTCTATAGCTTTTGTCAGTTAGGTTGCTCATATTTC
TTTTCGGCTTCGCCCCAAAATACGACCTGTAAGGGACTGTGTGACGACGT
CTACGCGAGGAACGTGTCCGTTGGGATTAGCGACTACGCCGAGAAGATGA
ACTCCAGTTCGTGGAGCATGTGGGACACGCAGCGCTTGGTGGGCCCCACA
AAACCCTCGGTGGAGCTGAACGCCACGTATCCGCACGCCAAGGCTCCATT
CCCTCTCCCGTTCTATAGCTTTTGTCAGTTAGGTTGCTCATATTTCTTTT
CGGCTTCGCCCCAAAATACGACCTGTAAGGGACTGTGTGACGACGTCTAC
GCGAGGAACGTGTCCGTTGGGATTAGCGACTACGCCGAGAAGGCACGGCT
GGAGTGCCGAGATGGGTGCGACATTGCTGTGCTGCGATGCCAGTCAGGAT
ACTCCTGTGTGGACGGTGTGATGTCGAAGTGCGCAGCTGGTACATATCGG
AACACGTCGTATGAGATGGTCACGTCTTGCCTACAGGCACGGCTGGAGTG
CCGAGATGGGTGCGACATTGCTGTGCTGCGATGCCAGTCAGGATACTCCT
GTGTGGACGGTGTGATGTCGAAGTGCGCAGCTGGTACATATCGGAACACG
TCGTATGAGATGGTCACGTCTTGCCTACAGTGTCCAAAAGGCACATACCG
AGAAGGAGAGAAGGGCCGTGGCGTGCAAGATTGTGACTTGTGTCCAGTGA
ACACATACCAGAACGTGACGGCGGCGACTGCAAAAATTGACTGCATTCGG
TGCCCTGACGGGTTGTATGCTGAGCTGGAGGGTACAGCGGAATGCAGCTG
CATAACCGCAGATAGCTGCATTCCCGAGTGGCAGAATTATCAACGTAATT
CCGTGCCGTTTGTCGGCAGGATGTAGTGTCCAAAAGGCACATACCGAGAA
GGAGAGAAGGGCCGTGGCGTGCAAGATTGTGACTTGTGTCCAGTGAACAC
ATACCAGAACGTGACGGCGGCGACTGCAAAAATTGACTGCATTCGGTGCC
CTGACGGGTTGTATGCTGAGCTGGAGGGTACAGCGGAATGCAGCTGCATA
ACCGCAGATAGCTGCATTCCCGAGTGGCAGAATTATCAACGTAATTCCGT
GCCGTTTGTCGGCAGGATGTAG
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