mRNA_H-paniculata_contig47.11697.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig47.11697.1 vs. uniprot
Match: A0A6H5JUF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF4_9PHAE) HSP 1 Score: 372 bits (955), Expect = 2.180e-124 Identity = 190/297 (63.97%), Postives = 211/297 (71.04%), Query Frame = 1
Query: 61 YDVYEDGSIGQSLPGSTSHSRGSSNLPFSVDADRLSDGVSSVSPLSTTCPSFPLYQNETDDNAGIRRREAANATMVARLEQGVARRGAGSFEKAVARYTLLQGNYSRTEKPSTVFQVHASERWNPSAFAIQQDEIYTVDVPGEQLWQDDRIRVDSGGYEVHYDAVDGCWVAVGRCHSYLSAETPRVPPPRARWMQLVCGVGDFATVLRESANGTERYLPASEYRDADLEKTLFPVGHNLTFVAQETGELVCFANDAEGLYGNNWGHLNVAVTRESWPPNGTYVS-NYEDYVTDAPTV 948
Y ED +IG LP N PFSVD++RLSDG SSVSPLSTT PSFPLY+N+TDD+ R AN TM +RLEQGVA RGAGSFE AVARY +LQ +YS +EKPS F VHA RWNPSAFAIQQ E Y V VPGEQ W+D RIR D+ GY +YDAVD CWVA GRC SYL PRVP ARWM+LVCG+GDF T LRE+ G ERYLP L+ +L PVG NLTFVA TGELVCFANDAEGLYGNN LNV VTRESWPP+GTYV NY+ Y+ D P V
Sbjct: 154 YSTEEDAAIGAGLP----------NSPFSVDSNRLSDGFSSVSPLSTTSPSFPLYRNDTDDSGNEPSRYWANLTMASRLEQGVATRGAGSFETAVARYNVLQESYS-SEKPSVTFPVHAWRRWNPSAFAIQQGETYAVQVPGEQYWEDGRIRADAAGYSTYYDAVDACWVANGRCRSYLHGSQPRVPAQYARWMELVCGIGDFVTALREAMTGEERYLPID---GESLQASLMPVGRNLTFVAAATGELVCFANDAEGLYGNNRASLNVTVTRESWPPDGTYVEENYDAYLDDDPPV 436
BLAST of mRNA_H-paniculata_contig47.11697.1 vs. uniprot
Match: D8LCK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK3_ECTSI) HSP 1 Score: 299 bits (766), Expect = 6.860e-99 Identity = 148/223 (66.37%), Postives = 165/223 (73.99%), Query Frame = 1
Query: 283 MVARLEQGVARRGAGSFEKAVARYTLLQGNYSRTEKPSTVFQVHASERWNPSAFAIQQDEIYTVDVPGEQLWQDDRIRVDSGGYEVHYDAVDGCWVAVGRCHSYLSAETPRVPPPRARWMQLVCGVGDFATVLRESANGTERYLPASEYRDADLEKTLFPVGHNLTFVAQETGELVCFANDAEGLYGNNWGHLNVAVTRESWPPNGTYVS-NYEDYVTDAPTV 948
M +RLEQGVA RGAGSFE AVARY +LQ +YS +EKPS F VHA RWNPSAFAIQQ E Y V+VPGEQ W+D RIR D+ GY +YDAVD CWVA GRC SYL PRVP RARWM+LVCG+GDF LRE+ G ERYLP L+ +L PVG NLTFVA TGELVCFANDAEGLYGNN LNV VTRESWPP+GTYV NY+ ++ D P V
Sbjct: 1 MASRLEQGVATRGAGSFETAVARYNVLQESYS-SEKPSVTFPVHAWRRWNPSAFAIQQGETYAVEVPGEQYWEDGRIRADAAGYATYYDAVDACWVANGRCRSYLHGSQPRVPAHRARWMELVCGIGDFVRALREAMPGEERYLPID---GESLQASLMPVGRNLTFVAAATGELVCFANDAEGLYGNNRASLNVTVTRESWPPDGTYVEENYDAHLDDDPPV 219
BLAST of mRNA_H-paniculata_contig47.11697.1 vs. uniprot
Match: A0A7S2RJF8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJF8_9STRA) HSP 1 Score: 248 bits (632), Expect = 3.100e-77 Identity = 138/311 (44.37%), Postives = 187/311 (60.13%), Query Frame = 1
Query: 1 GQTMALLGLF--ISTRVQSVLPYDVYEDGSIGQSLPGSTSHSRGSSNLPFSVDADRLSDGVSSVSPLSTTCPSFPLYQ-NETDDNAGI-------RRREAANATMVARLEQGVARRGAGSFEKAVARYT-LLQGNYSRTEKPSTVFQVHASERWNPSAFAIQQDEIYTVDVPGEQLWQDDRIRVDSGGYEVHYDAVDGCWVAVGRCHSYLSAETPRVPPPRARWMQLVCGVGDFATVLRESANGTERYLPASEYRDADLEKTLFPVGHNLTFVAQETGELVCFANDAEGLYGNNWGHLNVAVTRESWPPNG 900
G+ +AL+ L ++ V Y +YED LPGS S RG N+PF+VD +R SDG+SSVSPL+TT P+FP Y+ ++ GI +R+E A + EQG+A +GAG+ E A Y + + + KPS F+V A+E WNPS F IQQ E+Y ++V +Q W D I + GY +DAV C+VA GRC +YL R+ A+W QLVCG+G++ T LR+ + G +RY+P R+ + TLF VG N TF + TGELVCFANDA GLY NN G++NV V+R SWPP G
Sbjct: 11 GRVLALVALACCVAPPELHVWSYAIYEDEYANSQLPGSASDPRGLPNMPFTVDTNRESDGISSVSPLTTTSPAFPQYEVSDLYAQYGIVSPDDLTKRQEHAADIKYQQNEQGIAGKGAGAREVEAAAYQRMTRPGFLSDPKPSRQFRVQANETWNPSGFPIQQYEVYRIEVEEDQRWVDGLIETTADGYVARFDAVSQCYVAAGRCRAYLKQRL-RLANAGAKWFQLVCGIGNYVTRLRDVSGGKDRYMPI---REDEFMSTLFQVGSNTTFNSSFTGELVCFANDAYGLYWNNKGYVNVTVSRVSWPPLG 317
BLAST of mRNA_H-paniculata_contig47.11697.1 vs. uniprot
Match: A0A7S2DJM6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJM6_9STRA) HSP 1 Score: 243 bits (619), Expect = 3.280e-75 Identity = 141/294 (47.96%), Postives = 175/294 (59.52%), Query Frame = 1
Query: 49 SVLPYDVYEDGSIGQSLPGSTSHSRGSSNLPFSVDADRLSDGVSSVSPLSTTCPSFPLYQNET--DD---NAGIRRREAANATMVARLEQGVARRGAGSFEKAVARYTLLQGNYSRTEK----PSTVFQVHASERWNPSAFAIQQDEIYTVDVPGEQLWQDDRIRVDSGGYEVHYDAVDGCWVAVGRCHSYLSAETPRVPPPRAR---WMQLVCGVGDFATVLRESANGTERYLPASEYRDADLEKTLFPVGHNLTFVAQETGELVCFANDAEGLYGNNWGHLNVAVTRESWPP 894
SV Y+VYE+ LPG RG NLP +VDADR SDG SSVSPL+TT PSFP + + DD + + R E + +++EQG+A G + E+ VA + + + P+T F V A+ RWNPSAFAIQ E Y V+V G Q W D+ IRV + GY+ HYD+V C VA GRC YL P R R W +L CG+G+F L+E+ANGT R +P SE + TLFPVG NLTF A TGELVCFAND +GLY +N G LNV VTR SWPP
Sbjct: 24 SVGGYEVYENEYKNSKLPGHVGDFRGIPNLPHTVDADRASDGFSSVSPLTTTSPSFPYFADSAFFDDFGVSNTVHRLEHWRQVVASQVEQGIAPWGGSTRERDVAAANCAEALAATDGENYYLPNTTFAVAAALRWNPSAFAIQSGENYRVEVRGPQDWVDNSIRVGADGYDAHYDSVSRCHVAAGRCRPYLKR------PLRCRVGRWYELTCGIGNFVWKLQEAANGTARIMPLSE---DEFSNTLFPVGANLTFTAMHTGELVCFANDNDGLYYDNRGVLNVTVTRLSWPP 308
BLAST of mRNA_H-paniculata_contig47.11697.1 vs. uniprot
Match: A0A7S2D7Z9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D7Z9_9STRA) HSP 1 Score: 240 bits (613), Expect = 9.720e-74 Identity = 142/298 (47.65%), Postives = 176/298 (59.06%), Query Frame = 1
Query: 61 YDVYEDGSIGQS-LPGSTSHSRGSSNLPFSVDADRLSDGVSSVSPLSTTCPSFPLY-QNETDDNAGI----RRREAANATMVARLEQGVARRGAGSFEKAVARYT-LLQGNYSRTEKPSTVFQVHASERWNPSAFAIQQDEIYTVDVPGEQLWQDDRIRVDSGGYEVHYDAVDGCWVAVGRCHSYLSAETPRVPPPRARWMQLVCGVGDFATVLRESANGTERYLPASEYRDADLEKTLFPVGHNLTFVAQETGELVCFANDAEGLYGNNWGHLNVAVTRESWPP-----NGTYVSNY 918
Y+VY D LPG RG NLPF+VD +R SDG+S+VSPL+ T PS P Y ++ D G+ RR + T +++ EQG+A RGAG + A Y +++GN P+ F VHA RWNPSAFAIQ +E Y V+V G Q W D IR D+ GY+ HYDAV C VA GRC SYL + RW QL+CGVG++ L+E+A +R+L E +D ++F VG N TF A TGELVCFANDA GLY NN G LNV VTR SWPP NGTY Y
Sbjct: 63 YEVYVDEYANPGKLPGHKGDQRGLPNLPFTVDTNRQSDGISTVSPLTMTSPSLPYYTESAFFDEFGVTSVENRRTHFHLTQLSQEEQGIAERGAGDAARENAAYKRVMRGNLEYF--PNATFGVHADTRWNPSAFAIQAEETYQVEVRGAQDWIDGLIRTDADGYDAHYDAVSRCHVAAGRCRSYLKQP---LRLKEGRWFQLICGVGNYVWKLQEAAAEADRFLRLMEDEFSD---SVFAVGGNHTFRATHTGELVCFANDANGLYFNNAGALNVTVTRLSWPPLALNSNGTYDLKY 352
BLAST of mRNA_H-paniculata_contig47.11697.1 vs. uniprot
Match: A0A8J2SED6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SED6_9STRA) HSP 1 Score: 233 bits (594), Expect = 1.740e-70 Identity = 135/287 (47.04%), Postives = 176/287 (61.32%), Query Frame = 1
Query: 61 YDVYEDGSIGQSLPGSTSHSRGSS---NLPFSVDADRLSDGVSSVSPLSTTCPSFPLYQNETDDNAGIRRREAANATMVARLEQGVARRGAGSF--EKAVARYTLLQGNYSRTEKPSTVFQVHASERWNPSAFAIQQDEIYTVDVPGEQLWQDDRIRVDSGGYEVHYDAVDGCWVAVGRCHSYLSAETPRVPPPRARWMQLVCGVGDFATVLRESANG----TERYLPASEYRDADLEKTLFPVGHNLTFVAQETGELVCFANDAEGLYGNNWGHLNVAVTRESWPP 894
Y+VYE+ LPG RG NLP++VDA+R SDGVSSVSPL+ T P+FPL++ D A RR A A + + +EQGVA G G + E+ VA TL + + P+T F V+AS RWNPS FAIQ +E Y ++V G Q W D +++D+ GY YDAV CWVA GRC +YL A+ + A W +LVCGVG++ L+E ++G T Y+P R+A++ +LF VG +L F A GELVCFANDA+ LY NN G L V VTR SWPP
Sbjct: 82 YEVYENEYANDVLPGG----RGDDDLPNLPYAVDANRYSDGVSSVSPLTDTAPAFPLHRGAVSD-APAGRRRLALAKVQSEIEQGVAAAGDGEYVRERRVAE-TLERLAANPGAAPATSFWVNASLRWNPSGFAIQSNETYRIEVRGHQRWVDGFVKIDADGYTASYDAVSKCWVAAGRCRAYLGAKRRLLD---ANWFELVCGVGEYVWRLQEQSDGQGNDTAAYMPL---REAEVTASLFRVGSHLDFTATHDGELVCFANDADWLYWNNEGQLRVDVTRTSWPP 356
BLAST of mRNA_H-paniculata_contig47.11697.1 vs. uniprot
Match: A0A7S3NLN9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLN9_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.210e-68 Identity = 132/279 (47.31%), Postives = 173/279 (62.01%), Query Frame = 1
Query: 61 YDVYEDGSIGQSLPGSTSHSRGSSNLPFSVDADRLSDGVSSVSPLSTTCPSFPLYQNETDDNAGIRRREAANATMVARLEQGVARRGAGSFEKAVARYTLLQGNYSRTEKPSTVFQVHASERWNPSAFAIQQDEIYTVDVPGEQLWQDDRIRVDSGGYEVHYDAVDGCWVAVGRCHSYLSAETPRVPPPRARWMQLVCGVGDFATVLRESANGT-ERYLPASEYRDADLEKTLFPVGHNLTFVAQETGELVCFANDAEGLYGNNWGHLNVAVTRESWPP 894
Y+VYE+ LPG + RG N PF VD DR +DG SSVS L+TT SFPL +E D I R+E A+ +++ +QGVA R GS+E ++ L+ + PS +F V+AS RWNPSAFAIQ E YT+ V + W D+ IRV + GYE YD V C+VA G+C L+ PR P ARW +LVCG+GDF L++ A+ T ERYLP R+++L +T F VG +F+A TGELVCFANDA+ LY NN G + + V+R SWPP
Sbjct: 15 YEVYENEYAHDILPGL--NKRG--NFPFEVDGDRSADGFSSVSVLTTTSSSFPLDTSEPKDP--IARKEHADEKLLSEKDQGVAGRWDGSYEAEMSAVRRLRDD-ELGPPPSKLFYVNASLRWNPSAFAIQNGETYTIRVE-DTAWLDNYIRVGANGYEAKYDVVSQCYVAAGQCRPSLAGAVPRFPS--ARWFELVCGIGDFVWKLQQVADATLERYLPL---RESELIQTFFSVGTGRSFLANFTGELVCFANDADALYWNNRGSIAINVSRTSWPP 280
BLAST of mRNA_H-paniculata_contig47.11697.1 vs. uniprot
Match: F0XXI1_AURAN (WW domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXI1_AURAN) HSP 1 Score: 233 bits (595), Expect = 1.430e-65 Identity = 141/299 (47.16%), Postives = 179/299 (59.87%), Query Frame = 1
Query: 52 VLPYDVYEDGSIGQSLPGS--TSHSRGSS--NLPFSVDADRLSDGVSSVSPLSTTCPSFPLYQNETDDNAGIRRREAANATMVARLEQGVARRGAGSFEKAVARYTLLQGNYSRTEKPSTVFQVHASERWNPSAFAIQQDEIYTVDVPGEQLWQDDRIRVDSGGYEVHYDAVDGCWVAVGRCHSYLSAETPRVPPPRARWMQLVCGVGDFATVLRESANGTERYLPASEYRDADLEKTLFPVGHNLTFVAQETGELVCFANDAEGLYGNNWGHLNVAVTRESWPPNGTYVSNYEDYVTD 936
VL Y+V ED LPG SH S NLP++VDA RLSDGVSSVSPL+ T P+FP+++ + D A R A A + ++QGVA G G++ + R L+ + P+ F V+AS RWNPS+FAIQ+ E Y VDV G Q W D +++D+ GY HYDA+ CWVA GRC YL A R P A W LVCGVGD+ L+E +LP R+A++ TLF VGH L F A + GEL+CFANDA+ LY NN G L V V R SWPP T +NYE Y++D
Sbjct: 1521 VLAYEVKEDEYAHARLPGHGYDSHKEYPSLPNLPYTVDATRLSDGVSSVSPLTGTAPAFPIHRGDVSD-APDGRAVLAAAKRQSEVDQGVAAVGDGAYVRE-QRVDRLEEAGAWGPAPTRQFVVNASLRWNPSSFAIQRGETYRVDVLGPQRWVDGFVKIDADGYPAHYDAISQCWVAAGRCRPYLGA---RKRLPDADWFALVCGVGDYVWKLQEDELDPT-FLPL---REAEVSATLFFVGHYLEFTAVDDGELICFANDADHLYWNNQGQLVVDVARTSWPP--TRYTNYEAYLSD 1808
BLAST of mRNA_H-paniculata_contig47.11697.1 vs. uniprot
Match: A0A7S1XUQ3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUQ3_9STRA) HSP 1 Score: 208 bits (529), Expect = 6.030e-62 Identity = 116/270 (42.96%), Postives = 155/270 (57.41%), Query Frame = 1
Query: 97 LPGSTSHSRGSSNLPFSVDADRLSDGVSSVSPLSTTCPSFPLYQNETDDNAGIRRREAANATMVARLEQGVARRGAGSFEKAVARYTLLQGNYSRTE----KPSTVFQVHASERWNPSAFAIQQDEIYTVDVPGEQLWQDDRIRVDSGGYEVHYDAVDGCWVAVGRCHSYLSAETPRVPPPRARWMQLVCGVGDFATVLRESANGTERYLPASEYRDADLEKTLFPVGHNLTFVAQETGELVCFANDAEGLYGNNWGHLNVAVTRESWPP 894
LPG +RG N+PF+VD +R++DG+SS SP S + PSFP Y + ++ G RR AA +R EQG+A GAG + A ++ + + KPS F VHAS+ WNPS+ AIQ Y + V W D I D+ GYE Y+A C+ A +C+ +L R A+W +LVCGV D + L + A +RY+P E R + +TLF VG T VAQ TGEL+CFANDA+G Y NN+G +NV VTRE WPP
Sbjct: 31 LPGMVGDARGLPNMPFTVDTNRVADGISSTSPYSVSSPSFPSYFDALSNDLGGRRDHAA-LLAASREEQGIAEYGAGGSARENAYVDMVARENASADPFGTKPSRTFTVHASQEWNPSSMAIQDGVTYKISVEAGASWSDGGIAADTTGYETMYNARKHCFTANDKCYKHLKQ---RRRFKHAQWFELVCGVADSSWQLYDVAFEKDRYMPLREDR---IVETLFAVGAERTLVAQHTGELICFANDAQGGYFNNFGSVNVTVTREDWPP 293
BLAST of mRNA_H-paniculata_contig47.11697.1 vs. uniprot
Match: A0A835YTW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW1_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.790e-44 Identity = 81/202 (40.10%), Postives = 109/202 (53.96%), Query Frame = 1
Query: 343 VARYTLLQGNYSRTEKPSTVFQVHASERWNPSAFAIQQDEIYTVDVPGEQLWQDDRIRVDSGGYEVHYDAVDGCWVAVGRCHSYLSAETPRVPPPRARWMQLVCGVGDFATVLRESANGTERYLPASEYRDADLEKTLFPVGHNLTFVAQETGELVCFANDAEGLYGNNWGHLNVAVTRESWPPNGTYVSNYEDYVTDAPTV 948
+A L G R P+T+F V+A+ RWNPS FA+Q E YT+DV W + D+ G YDA CW C ++ + + R+PPP+ R +QLVCGVGD + A G + +P E + D TLF G + + TGELVCFANDA LY +N G + V VTR SWPP T+ +Y Y + AP +
Sbjct: 29 IALIPALPGYSGRQRAPTTLFSVNAAARWNPSGFAVQAGETYTIDVLAGGQWSTGAVVTDADGISPQYDATQQCWTYNTTCLTHQNYDATRLPPPQGRLLQLVCGVGDMQSAPAAVAEGLDWAMPLREEKFTD---TLFAAGSYVEITPRFTGELVCFANDANDLYFDNNGTVTVNVTRLSWPPATTFTESYVQYFSSAPNI 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47.11697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig47.11697.1 >prot_H-paniculata_contig47.11697.1 ID=prot_H-paniculata_contig47.11697.1|Name=mRNA_H-paniculata_contig47.11697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=316bp MALLGLFISTRVQSVLPYDVYEDGSIGQSLPGSTSHSRGSSNLPFSVDADback to top mRNA from alignment at H-paniculata_contig47:8685..16848- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig47.11697.1 ID=mRNA_H-paniculata_contig47.11697.1|Name=mRNA_H-paniculata_contig47.11697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8164bp|location=Sequence derived from alignment at H-paniculata_contig47:8685..16848- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig47:8685..16848- >mRNA_H-paniculata_contig47.11697.1 ID=mRNA_H-paniculata_contig47.11697.1|Name=mRNA_H-paniculata_contig47.11697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1896bp|location=Sequence derived from alignment at H-paniculata_contig47:8685..16848- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |