mRNA_H-paniculata_contig4668.11630.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4668.11630.1 vs. uniprot
Match: D8LND8_ECTSI (Putative: flagellar associated protein, qilin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND8_ECTSI) HSP 1 Score: 179 bits (454), Expect = 1.530e-53 Identity = 93/131 (70.99%), Postives = 105/131 (80.15%), Query Frame = 1
Query: 16 MRALGYPRLISLDNFRVPNFELVADALYWMVKRYDPDIDISDNIESENDRVDFLTGVAQAMQDKAHIKLNARKLYAADGHAVKELLKLATLLYSASRVDEEGL-----EGGGGRGGSSATDEAEPPLITQV 393
MRALGYPR +S+DNFR PNF+LVAD LYWMVKRYDPDI +SDNIESENDRVDFLTGVA+AM +KAHIKLNA++LYAADGHAVKELLKLATLLYSASRV++ + A DEAE PL +Q
Sbjct: 1 MRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVEQNDTGXXXXXXXXXXXXTFADDEAEAPLTSQA 131
BLAST of mRNA_H-paniculata_contig4668.11630.1 vs. uniprot
Match: A0A836CCE3_9STRA (Clusterin-associated protein-1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE3_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.750e-50 Identity = 85/106 (80.19%), Postives = 96/106 (90.57%), Query Frame = 1
Query: 1 DFTEIMRALGYPRLISLDNFRVPNFELVADALYWMVKRYDPDIDISDNIESENDRVDFLTGVAQAMQDKAHIKLNARKLYAADGHAVKELLKLATLLYSASRVDEE 318
+FTE+MRALGYPRLIS+DNFR PNFELVAD LYW+VKRYDPD+ ISDNIESE DRVDFL G AQAM KAHI++NARKLY+ADGHAVKELLKLAT+LY ASR +E+
Sbjct: 8 NFTEMMRALGYPRLISVDNFRTPNFELVADILYWLVKRYDPDVPISDNIESEGDRVDFLLGAAQAMAAKAHIRMNARKLYSADGHAVKELLKLATVLYRASRAEED 113
BLAST of mRNA_H-paniculata_contig4668.11630.1 vs. uniprot
Match: A0A7S2HTN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HTN9_9STRA) HSP 1 Score: 159 bits (401), Expect = 3.240e-45 Identity = 75/103 (72.82%), Postives = 91/103 (88.35%), Query Frame = 1
Query: 1 DFTEIMRALGYPRLISLDNFRVPNFELVADALYWMVKRYDPDIDISDNIESENDRVDFLTGVAQAMQDKAHIKLNARKLYAADGHAVKELLKLATLLYSASRV 309
+FTE+MRALGYPRLIS+DNFR PNFELVAD LYWMVKRYDP +SD I++E+DRV+FLT +AQAM KA +KLNA++LYAADG AVKELLK++T+LY ASR+
Sbjct: 8 NFTEMMRALGYPRLISVDNFRTPNFELVADVLYWMVKRYDPGTSLSDVIDTEDDRVEFLTSIAQAMAVKAKVKLNAKRLYAADGRAVKELLKISTMLYDASRI 110
BLAST of mRNA_H-paniculata_contig4668.11630.1 vs. uniprot
Match: A0A7S2RCX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCX5_9STRA) HSP 1 Score: 152 bits (383), Expect = 3.750e-45 Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = 1
Query: 1 DFTEIMRALGYPRLISLDNFRVPNFELVADALYWMVKRYDPDIDISDNIESENDRVDFLTGVAQAMQDKAHIKLNARKLYAADGHAVKELLKLATLLYSASRVDEE 318
+FTEIMR+LGYPRLIS++NFR PNF+LVAD LYWM+KRYDP I +++ I++E+DRV+FL AQAM KA IKLN ++LYAADG AVKELLK+A LYSASRV E
Sbjct: 8 NFTEIMRSLGYPRLISVENFRTPNFQLVADVLYWMIKRYDPAIHVTEEIDTEDDRVEFLCSAAQAMAAKAKIKLNTKRLYAADGRAVKELLKIAQELYSASRVQAE 113
BLAST of mRNA_H-paniculata_contig4668.11630.1 vs. uniprot
Match: A0A7S1TSM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSM4_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.530e-44 Identity = 77/103 (74.76%), Postives = 86/103 (83.50%), Query Frame = 1
Query: 1 DFTEIMRALGYPRLISLDNFRVPNFELVADALYWMVKRYDPDIDISDNIESENDRVDFLTGVAQAMQDKAHIKLNARKLYAADGHAVKELLKLATLLYSASRV 309
DFTEIMR LGY RLISL+NFR PNFELVAD LYWMVKRYDP I I D+IESE DRV+FLT +A M KA I LNA++LYAADGHAVKELLKLAT+L+ A+R
Sbjct: 86 DFTEIMRNLGYQRLISLENFRTPNFELVADVLYWMVKRYDPAIGIPDSIESEEDRVEFLTVIAHQMYSKAQITLNAKRLYAADGHAVKELLKLATMLHKAART 188
BLAST of mRNA_H-paniculata_contig4668.11630.1 vs. uniprot
Match: F0YCH5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCH5_AURAN) HSP 1 Score: 155 bits (393), Expect = 3.650e-44 Identity = 75/105 (71.43%), Postives = 91/105 (86.67%), Query Frame = 1
Query: 4 FTEIMRALGYPRLISLDNFRVPNFELVADALYWMVKRYDPDIDISDNIESENDRVDFLTGVAQAMQDKAHIKLNARKLYAADGHAVKELLKLATLLYSASRVDEE 318
F E+MRALGY RL+S++NFR PNFELVA ALYWMVKRYDP+I++SD IE E+DRVDFLT AQA+ KA IKLN ++LYAADG AVKELLK+AT+LY+AS+ +EE
Sbjct: 9 FAEMMRALGYQRLVSVENFRKPNFELVASALYWMVKRYDPEINVSDCIEKEDDRVDFLTVTAQALASKAKIKLNTKRLYAADGRAVKELLKVATMLYNASKANEE 113
BLAST of mRNA_H-paniculata_contig4668.11630.1 vs. uniprot
Match: A0A7S2RD03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD03_9STRA) HSP 1 Score: 152 bits (384), Expect = 6.040e-42 Identity = 75/112 (66.96%), Postives = 91/112 (81.25%), Query Frame = 1
Query: 1 DFTEIMRALGYPRLISLDNFRVPNFELVADALYWMVKRYDPDIDISDNIESENDRVDFLTGVAQAMQDKAHIKLNARKLYAADGHAVKELLKLATLLYSASRVDEEGLEGGG 336
+FTEIMR+LGYPRLIS++NFR PNF+LVAD LYWM+KRYDP I +++ I++E+DRV+FL AQAM KA IKLN ++LYAADG AVKELLK+A LYSASRV E E G
Sbjct: 8 NFTEIMRSLGYPRLISVENFRTPNFQLVADVLYWMIKRYDPAIHVTEEIDTEDDRVEFLCSAAQAMAAKAKIKLNTKRLYAADGRAVKELLKIAQELYSASRVQAEKEEADG 119
BLAST of mRNA_H-paniculata_contig4668.11630.1 vs. uniprot
Match: A8J6F1_CHLRE (Flagellar associated protein, qilin-like protein n=2 Tax=Chlamydomonadales TaxID=3042 RepID=A8J6F1_CHLRE) HSP 1 Score: 144 bits (364), Expect = 8.030e-40 Identity = 69/100 (69.00%), Postives = 86/100 (86.00%), Query Frame = 1
Query: 4 FTEIMRALGYPRLISLDNFRVPNFELVADALYWMVKRYDPDIDISDNIESENDRVDFLTGVAQAMQDKAHIKLNARKLYAADGHAVKELLKLATLLYSAS 303
FTE+M+ALGYPRLIS++NFRVPNFELVAD LYW+V RY P ++I+D+I +E+DRV FL VAQ M KA +KLN ++LYAADG+AVKELLKLA+LLY A+
Sbjct: 9 FTEVMKALGYPRLISMENFRVPNFELVADCLYWLVHRYYPGVEIADDISTESDRVKFLQSVAQVMLTKARMKLNIKRLYAADGNAVKELLKLASLLYKAT 108
BLAST of mRNA_H-paniculata_contig4668.11630.1 vs. uniprot
Match: A0A2R5GT02_9STRA (Clusterin-associated protein 1-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GT02_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.760e-39 Identity = 77/127 (60.63%), Postives = 92/127 (72.44%), Query Frame = 1
Query: 1 DFTEIMRALGYPRLISLDNFRVPNFELVADALYWMVKRYDPDIDISDNIESENDRVDFLTGVAQAMQDKAHIKLNARKLYAADGHAVKELLKLATLLYSASRVD----EEGLEGGGGRGGSSATDEA 369
DFTE MR LGYPRL+S+DNFR PNF LVAD LYWMV +YDP + ISD+I +E+ RVDFLT +AQ M KA +KLN ++LYAADG AVKELLK+A LLY+A + +E EG GG T EA
Sbjct: 8 DFTEYMRVLGYPRLVSVDNFRTPNFPLVADILYWMVHKYDPAVSISDDISTEDCRVDFLTSIAQVMAVKATVKLNTKRLYAADGKAVKELLKVAKLLYAAHEANVGGHDENREGKGGEEDVPETGEA 134
BLAST of mRNA_H-paniculata_contig4668.11630.1 vs. uniprot
Match: A0A6I9NE88_9TELE (clusterin-associated protein 1 homolog n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9NE88_9TELE) HSP 1 Score: 137 bits (345), Expect = 4.150e-39 Identity = 63/108 (58.33%), Postives = 87/108 (80.56%), Query Frame = 1
Query: 1 DFTEIMRALGYPRLISLDNFRVPNFELVADALYWMVKRYDPDIDISDNIESENDRVDFLTGVAQAMQDKAHIKLNARKLYAADGHAVKELLKLATLLYSASRVDEEGL 324
+FTE+MRALGYPRLIS++NFR PNF LVA+ L W+VKRY+P +DI ++++E+DR+ F+ VAQ M KAHIKLN ++LY ADG+AVKE+LK+ ++LYSA + + L
Sbjct: 8 NFTEMMRALGYPRLISMENFRSPNFTLVAEILIWLVKRYEPQMDIPTDVDTESDRIFFIKAVAQFMATKAHIKLNTKRLYQADGYAVKEMLKITSVLYSAMKTKQMAL 115 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4668.11630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4668.11630.1 >prot_H-paniculata_contig4668.11630.1 ID=prot_H-paniculata_contig4668.11630.1|Name=mRNA_H-paniculata_contig4668.11630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp MRALGYPRLISLDNFRVPNFELVADALYWMVKRYDPDIDISDNIESENDRback to top mRNA from alignment at H-paniculata_contig4668:3500..5257- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4668.11630.1 ID=mRNA_H-paniculata_contig4668.11630.1|Name=mRNA_H-paniculata_contig4668.11630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1758bp|location=Sequence derived from alignment at H-paniculata_contig4668:3500..5257- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4668:3500..5257- >mRNA_H-paniculata_contig4668.11630.1 ID=mRNA_H-paniculata_contig4668.11630.1|Name=mRNA_H-paniculata_contig4668.11630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at H-paniculata_contig4668:3500..5257- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |