mRNA_H-paniculata_contig4635.11571.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4635.11571.1 vs. uniprot
Match: A0A6H5LMX6_9PHAE (DUF676 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMX6_9PHAE) HSP 1 Score: 340 bits (873), Expect = 1.370e-103 Identity = 233/528 (44.13%), Postives = 281/528 (53.22%), Query Frame = 1
Query: 343 KAGPTHLVVLVHGLGGTPEDLTYLKETLERRGGPGTLVHLAKCNKGRTKDGVAEGGTRLANEVLGVVDSTPSLSRISLVGNSLGGLYARYAAKVLYREEGDDIRDYATSNRGKTGSYQAPMANMSDGDAPGVLEASGGEGRGQTSVGGTVAGLKPAVFMSIAAPHLGVRRFTYVPVPSSLQGLAGVFVGKTGSDLFLASSSSSNDKSGQTASSDQTATASFSNGKAFGNISAESAARAAESGPGAVAAGGTSPAGAVQNRAGGXXXXXXXXXXQRQQQLENDKNESRIPLLYDMATSEEFLKPLRSFSTRRAYANRRGDFMVPYETAAFVESSEEDGADAADGSNRSTTAGRRFR---------MIQRRIAQ---------------MGLMGHVLGARQGSIVATSRVP-----------SEREGGLGERQSSGGLEKAESAATGQGQGGRDTFLDGVSGMFQKADREMEEEMAAGLNSCGWQKVSVDFGGLLPLSHNKICALSRSPLAAALYGSGKNIMDHAADFLI 1821
K P HLVVL HGL GTPEDLTYLK++LER GG LVH A+ N+G+TKDGV EGG+RLA E+ VV STPSLSRISLVGNSLGGLYARYAAK+LYR+E TG G + G TVAGL P+VFM+IA PHLGVRRFTYVP+PS L LAGVFVGKTG DLFL+ + + G XXXXXXXXXX K+ LLY+MAT+E+FL+PL++F RRAYANRRGDFMVPY TAAFVE E DG+DA+ G + ++ R ++ LGA+ +IV SRVP S+ + G+G+R +GG K E+ A + MEEEMAAGLNSCGW+KVSVDFGG+ P SHNKICALSR+ + ALYGSG++++DHAA FL+
Sbjct: 92 KGLPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEIREVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDE-------------TTG--------------------------GDSGTGATVAGLSPSVFMTIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLS-----------------------------------------------------------RKKVGXXXXXXXXXXXXXXXXXXAAKDGRENSLLYNMATTEDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDDAKTGEEEQEQDVSESDAVVSRGVSSPPDGAAASLAAGTESFTFADRWLGAKNAAIVGVSRVPAAGAAXXXXXRSDTDSGMGDR--AGGANKEEAHAR----------------------KSMEEEMAAGLNSCGWEKVSVDFGGVAPFSHNKICALSRTAITTALYGSGRSVVDHAAAFLV 497
BLAST of mRNA_H-paniculata_contig4635.11571.1 vs. uniprot
Match: D7G287_ECTSI (Putative serine esterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G287_ECTSI) HSP 1 Score: 333 bits (854), Expect = 4.740e-101 Identity = 232/537 (43.20%), Postives = 281/537 (52.33%), Query Frame = 1
Query: 325 DTATATKAGPTHLVVLVHGLGGTPEDLTYLKETLERRGGPGTLVHLAKCNKGRTKDGVAEGGTRLANEVLGVVDSTPSLSRISLVGNSLGGLYARYAAKVLYREEGDDIRDYATSNRGKTGSYQAPMANMSDGDAPGVLEASGGEGRGQTSVGGTVAGLKPAVFMSIAAPHLGVRRFTYVPVPSSLQGLAGVFVGKTGSDLFLASSSSSNDKSGQTASSDQTATASFSNGKAFGNISAESAARAAESGPGAVAAGGTSPAGAVQNRAGGXXXXXXXXXXQRQQQLENDKNESRI-PLLYDMATSEEFLKPLRSFSTRRAYANRRGDFMVPYETAAFVESSEEDGADAADGSNRSTTAGRRFR----------MIQRRIAQ---------------MGLMGHVLGARQGSIVATSRVPS------------EREGGLGERQSSGGLEKAESAATGQGQGGRDTFLDGVSGMFQKADREMEEEMAAGLNSCGWQKVSVDFGGLLPLSHNKICALSRSPLAAALYGSGKNIMDHAADFLI 1821
DT K P HLVVL HGL GTPEDLTYLK++LER GG LVH A+ N+G+TKDGV EGG+RLA E+L VV STPSLSRISLVGNSLGGLY RYAAK+LYR+E +GG+G G TVAGL P+VFM+IA PHLGVRRFTYVP+PS L LAGVFVGKTG DLFL+ + + G XXXXXXXXXX + R LLY+MAT+++FL+PL++F RRAYANRRGDFMVPY TAAFVE E DG+DA+ G ++ R ++ +LGA+ +IV SRV + + + G+G+R G K E A T + MEEEMAAGLNSCGW+KVSVDFGG+ P SHNKICALSR+ + ALYGSG++++DHAA FL+
Sbjct: 54 DTKVDDKGLPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYVRYAAKLLYRDE-----------------------------------TTGGDG----GTGATVAGLSPSVFMTIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLS-----------------------------------------------------------RKKGGXXXXXXXXXXXXXXXXXXXXAKDGRENSLLYNMATTKDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDGAKTGEEEEXEQDVSESDAVVSRGVSSPPDGAAAALADGTESFTFADRLLGAKNAAIVGVSRVSAAGXXXXXXXXRTDSDSGVGDRA---GAAKKEEALT---------------------RKSMEEEMAAGLNSCGWEKVSVDFGGVAPFSHNKICALSRTAITTALYGSGRSVVDHAAAFLV 468
BLAST of mRNA_H-paniculata_contig4635.11571.1 vs. uniprot
Match: L1J7J1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J7J1_GUITC) HSP 1 Score: 209 bits (533), Expect = 3.490e-53 Identity = 164/477 (34.38%), Postives = 201/477 (42.14%), Query Frame = 1
Query: 346 AGPTHLVVLVHGLGGTPEDLTYLKETLERRGGP--GTLVHLAKCNKGRTKDGVAEGGTRLANEVLGVVDSTPSLSRISLVGNSLGGLYARYAAKVLYREEGDDIRDYATSNRGKTGSYQAPMANMSDGDAPGVLEASGGEGRGQTSVGGTVAGLKPAVFMSIAAPHLGVRRFTYVPVPSSLQGLAGVFVGKTGSDLFLASSSSSNDKSGQTASSDQTATASFSNGKAFGNISAESAARAAESGPGAVAAGGTSPAGAVQNRAGGXXXXXXXXXXQRQQQLENDKNESRIPLLYDMATSEEFLKPLRSFSTRRAYANRRGDFMVPYETAAFVESSEEDGADAADGSNRSTTAGRRFRMIQRRIAQMGLMGHVLGARQGSIVATSRVPSEREGGLGERQSSGGLEKAESAATGQGQGGRDTFLDGVSGMFQKADREMEEEMAAGLNSCGWQKVSVDFGGLLPLSHNKICALSRSPLAAA 1770
+GP HL+VLVHGL GT +DL YLK +++ + G TLV+LAKCN+ +T+DGV GG RLA E++ +V+ PSL RIS VGNSLGGLY+RYA VL+RE GG GR + + V GLKP F++ A PHLGVRRFTY+P+P L GLA VFVG+TG DLF+ K PLL M+T E FL+ LRSFS RRAYAN GDF+VP+ TAAF+ EDG + T+ F RRI Q +V V + E D + K+D E MA LNSCGW KV V F LPL+HNKICAL L A
Sbjct: 155 SGPEHLIVLVHGLAGTADDLAYLKRSVDSQDGTLKNTLVYLAKCNEDKTRDGVEAGGWRLAKEIVELVEEVPSLQRISFVGNSLGGLYSRYAIAVLHRE--------------------------------------GGGGRQEEDL---VCGLKPDTFVTTATPHLGVRRFTYLPIPDQLHGLAPVFVGRTGDDLFMLG-----------------------------------------------------------------------------------KEGDEPPLLLLMSTCEVFLRGLRSFSRRRAYANLEGDFLVPFGTAAFMV---EDGRAGWGILEKGTSED--FEKKSRRILN-----------QSQVVCEMMVDAHEE---------------------------QVSSDRIRSANGKSDSEAL--MATALNSCGWSKVGVRFSSPLPLAHNKICALEGGGLLRA 462
BLAST of mRNA_H-paniculata_contig4635.11571.1 vs. uniprot
Match: R1BBJ2_EMIHU (DUF676 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BBJ2_EMIHU) HSP 1 Score: 161 bits (408), Expect = 6.030e-40 Identity = 161/513 (31.38%), Postives = 196/513 (38.21%), Query Frame = 1
Query: 331 ATATKAGPTHLVVLVHGLGGTPEDLTYLKETLERRGGPGTLVHLAKCNKGRTKDGVAEGGTRLANEVLGVVDSTPSLSRISLVGNSLGGLYARYAAKVLYREEGDDIRDYATSNRGKTGSYQAPMANMSDGDAPGVLEASGGEGRGQTSVGGTVAGLKPAVFMSIAAPHLGVRRFTYVPVPSSLQGLAGVFVGKTGSDLFLASSSSSNDKSGQTASSDQTATASFSNGKAFGNISAESAARAAESGPGAVAAGGTSPAGAVQNRAGGXXXXXXXXXXQRQQQLENDKNESRIPLLYDMATSEE-FLKPLRSFSTRRAYANRRGDFMVPYETAAFVESSEEDGADAADGSNRSTTAGRRFRMIQRRIAQMGLMGHVLGARQGSIVATSRVPSEREGGLG----ERQSSGGLEKAESAATGQGQGGRDTFLDGVSGMFQKADREMEEEMAAGLNSCGWQKVSVDF---GGLLPLSHNKICALSRSPLAAALYG-----SGKNIMDHAADFLIAGR 1830
A T A P HLVVL HGL G +L L++ L GG LVHLA N+G T+DGVA GG RLA E+ V S PSL +SLVGNSLGGLY R AA LY G GQ +G L P ++ PHLGVRR+TY+P+P +L L G+ G+T SDL L R ++ P R PLL +MA + + LRSF RR YAN RGDFMVP+ TAA E G A G R RF AR+ + V R G+G +RQ E+AE A G E EEEM AGL++ W KV V F G L PL+HNK+ AL R A G +M+ AA F++ GR
Sbjct: 5 AVVTAASPDHLVVLQHGLYGGASNLAVLRQCLVGIGGDNVLVHLASANEGMTRDGVAAGGRRLAAEIRSVAASAPSLESLSLVGNSLGGLYVRAAAAELY-------------------------------------------GGGQQELG-----LAPNTLVTTGCPHLGVRRYTYLPLPPALHSLGGLVAGRTASDLLL---------------------------------------RRTDADP-------------------------------------------RRPLLVEMADPDSRYGVALRSFQRRRLYANLRGDFMVPFGTAAI----ETGGWAAGVGDGRLVA---RF-----------------AARRDVVFRDVEVCGGRADGIGVVCEQRQ-----ERAEEGAEGA---------------------EWEEEMRAGLSAVAWDKVGVSFRAAGTLTPLAHNKLPALRREGWRRAFEWVEQAQEGVPVMEDAARFVVGGR 337
BLAST of mRNA_H-paniculata_contig4635.11571.1 vs. uniprot
Match: A0A813D472_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D472_POLGL) HSP 1 Score: 140 bits (354), Expect = 1.020e-33 Identity = 86/194 (44.33%), Postives = 102/194 (52.58%), Query Frame = 1
Query: 352 PTHLVVLVHGLGGTPEDLTYLKETLERRGGPGTLVHLAKCNKGRTKDGVAEGGTRLANEVLGVVDSTPSLSRISLVGNSLGGLYARYAAKVLYREEGDDIRDYATSNRGKTGSYQAPMANMSDGDAPGVLEASGGEGRGQTSVGGTVAGLKPAVFMSIAAPHLGVRRFTYVPVPSSLQGLAGVFVGKTGSDLFL 933
PTHLVVL HGL GT DL L L++ P LVH A N GRT DGVA GG RLA E+ V P++ +SLVGNSLGGLYAR+AA L+ GD G T+AGL+PA F+SI PHLG+RRFT++PVP L G + VG+TG DLFL
Sbjct: 36 PTHLVVLQHGLSGTVADLNRLGAELQQAC-PDVLVHSATSNFGRTTDGVAAGGLRLAEEIRAVAAQHPTVCELSLVGNSLGGLYARFAAGELWAASGD---------------------------------------------GETLAGLRPATFVSIGCPHLGIRRFTFLPVPDVLHGASRAVVGRTGEDLFL 183
BLAST of mRNA_H-paniculata_contig4635.11571.1 vs. uniprot
Match: A0A813G1M4_POLGL (Hypothetical protein (Fragment) n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G1M4_POLGL) HSP 1 Score: 140 bits (354), Expect = 9.640e-33 Identity = 86/194 (44.33%), Postives = 102/194 (52.58%), Query Frame = 1
Query: 352 PTHLVVLVHGLGGTPEDLTYLKETLERRGGPGTLVHLAKCNKGRTKDGVAEGGTRLANEVLGVVDSTPSLSRISLVGNSLGGLYARYAAKVLYREEGDDIRDYATSNRGKTGSYQAPMANMSDGDAPGVLEASGGEGRGQTSVGGTVAGLKPAVFMSIAAPHLGVRRFTYVPVPSSLQGLAGVFVGKTGSDLFL 933
PTHLVVL HGL GT DL L L++ P LVH A N GRT DGVA GG RLA E+ V P++ +SLVGNSLGGLYAR+AA L+ GD G T+AGL+PA F+SI PHLG+RRFT++PVP L G + VG+TG DLFL
Sbjct: 36 PTHLVVLQHGLSGTVADLNRLGAELQQAC-PDVLVHSATSNFGRTTDGVAAGGLRLAEEIRAVAAQHPTVCELSLVGNSLGGLYARFAAGELWAASGD---------------------------------------------GETLAGLRPATFVSIGCPHLGIRRFTFLPVPDVLHGASRAVVGRTGEDLFL 183
BLAST of mRNA_H-paniculata_contig4635.11571.1 vs. uniprot
Match: A0A4D9CXB7_9STRA (DUF676 domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXB7_9STRA) HSP 1 Score: 139 bits (350), Expect = 5.420e-32 Identity = 85/196 (43.37%), Postives = 101/196 (51.53%), Query Frame = 1
Query: 352 PTHLVVLVHGLGGTPEDLTYLKETLERRGGPGTLVHLAKCNKGRTKDGVAEGGTRLANEVLGVVDSTPSLSRISLVGNSLGGLYARYAAKVLYREEGDDIRDYATSNRGKTGSYQAPMANMSDGDAPGVLEASGGEGRGQTSVGGTVAGLKPAVFMSIAAPHLGVRRFTYVPVPSSLQGLAGVFVGKTGSDLFLAS 939
PTHL V+VHGL G P DLTYL + RG L HLA CN +T DGV +GG RLA E+ VV + PSL IS +GNSLGG+Y+RYA +L+ P TV GLKP FMSIA PHLGVRRFT VPVP + +F+G+TG+DL L S
Sbjct: 27 PTHLAVVVHGLHGRPADLTYLGNAIGSRGQGRILPHLAHCNLHKTMDGVVKGGERLAAEIKEVVAAHPSLRAISFIGNSLGGVYSRYALSLLWE----------------------PRTR-------------------------TVLGLKPITFMSIATPHLGVRRFTVVPVPDLVHVATPLFIGQTGNDLILRS 175
BLAST of mRNA_H-paniculata_contig4635.11571.1 vs. uniprot
Match: A0A7S3XVN6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVN6_HETAK) HSP 1 Score: 133 bits (335), Expect = 4.710e-31 Identity = 110/364 (30.22%), Postives = 156/364 (42.86%), Query Frame = 1
Query: 796 GLKPAVFMSIAAPHLGVRRFTYVPVPSSLQGLAGVFVGKTGSDLFLASSSSSNDKSGQTASSDQTATASFSNGKAFGNISAESAARAAESGPGAVAAGGTSPAGAVQNRAGGXXXXXXXXXXQRQQQLENDKNESRIPLLYDMATSEEFLKPLRSFSTRRAYANRRGDFMVPYETAAFVESSEEDGADAADGSNRSTT------------------AGRRFRMIQRRIAQMGLMGHVLGARQGS---IVATSRVPSEREGGLGERQSSGGLEKAESAATGQGQGGRDTFLDGVSGMFQKADREMEEEMAAGLNSCGWQKVSVDFGGLLPLSHNKICALSRSPLAAALYGSGKNIMDHAADFLIA 1824
GL+ ++A+PHLGVRRFTY+ +P L LAG FVG+TG DLFL ++AA AA +R PLL +MATS +L+PL F RRAYAN +GDFMVP+ TA+F D A A ++ TT GR F +R GH +G+ +V R S + G +++ G + + D D + ++ + +EE MA L+S GW KV VDFGG++P SHN ICALSR+P+ ++ +GK +MDHAA ++++
Sbjct: 2 GLRARSLTTVASPHLGVRRFTYLALPDFLHPLAGTFVGRTGEDLFLR----------------------------------DAAAAAA----------------------------------------------ARPPLLLEMATSPAYLEPLALFQRRRAYANVQGDFMVPFGTASFAP----DPAAFAAAASAPTTQEGPXXXXXXXXXPVASVGGRAFSGFRR-------FGHFAPFGRGNKEKVVWEYRTASASKYG----RNADGAGRFSKEIVKERANFWDQQHDPSTSSIERGGKTIEETMAKSLDSVGWSKVGVDFGGIIPFSHNMICALSRNPITEKVFEAGKPVMDHAAQYILS 270
BLAST of mRNA_H-paniculata_contig4635.11571.1 vs. uniprot
Match: C1MYG1_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MYG1_MICPC) HSP 1 Score: 135 bits (341), Expect = 8.070e-30 Identity = 81/197 (41.12%), Postives = 116/197 (58.88%), Query Frame = 1
Query: 349 GPTHLVVLVHGLGGTPEDLTYLKETLERRGGPGTLVHLAKCNK-GRTKDGVAEGGTRLANEVLGVVDSTPSLSRISLVGNSLGGLYARYAAKVLYREEGDDIRDYATSNRGKTGSYQAPMANMSDGDAPGVLEASGGEGRGQTSVGGTVAGLKPAVFMSIAAPHLGVRRFTYVPV-PSSLQGLAGVFVGKTGSDLFL 933
GPTHL VL+HGLGGTP DL L++ L+RRGG LVH CN ++ DG+A G R+A+++ VV + PSL IS+VGNSLGG+YARYAA +LY + DD + +G++ A++ P G GR G T+AGL P +++ A PHLGV F ++ + P++++ G +G + L L
Sbjct: 76 GPTHLYVLIHGLGGTPHDLACLEKNLKRRGGDSVLVHAPGCNALTKSFDGIANGAKRVADDIRAVVAAHPSLVYISMVGNSLGGVYARYAAALLYEADEDD-----SPGKGRSNDDDGGGADLWRNQPPSPR----GPGRSPRGAG-TIAGLIPDTYLTTATPHLGVGPFGWIGLFPAAVRAFTGNLMGPSTRQLML 262
BLAST of mRNA_H-paniculata_contig4635.11571.1 vs. uniprot
Match: A0A7S1HTD2_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HTD2_9EUGL) HSP 1 Score: 128 bits (322), Expect = 8.380e-30 Identity = 80/182 (43.96%), Postives = 96/182 (52.75%), Query Frame = 1
Query: 388 GTPEDLTYLKETLERRGGPGTLVHLAKCNKGRTKDGVAEGGTRLANEVLGVVDSTPSLSRISLVGNSLGGLYARYAAKVLYREEGDDIRDYATSNRGKTGSYQAPMANMSDGDAPGVLEASGGEGRGQTSVGGTVAGLKPAVFMSIAAPHLGVRRFTYVPVPSSLQGLAGVFVGKTGSDLFL 933
GT DL +L +E PG LV A+ N+GRTKDGVA GG RLA E+ + PSL +ISLVGNSLGGLY RY AK+LY P + T+AGL+P M++A PHLG+R FT+VPVPS LQ LA V VG+TG DLFL
Sbjct: 2 GTAHDLHFLAGRIEAES-PGALVLAARSNEGRTKDGVAAGGERLAAEIRECIRQYPSLQQISLVGNSLGGLYVRYTAKLLYD----------------------PTSR-------------------------TIAGLQPRTLMTLACPHLGIRGFTFVPVPSPLQPLARVLVGQTGDDLFL 135 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4635.11571.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4635.11571.1 >prot_H-paniculata_contig4635.11571.1 ID=prot_H-paniculata_contig4635.11571.1|Name=mRNA_H-paniculata_contig4635.11571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=644bp MRPVARTLVILYLLGIFSVCRSFFMNGGRPTAGAPQNRPLTAKAAETPSPback to top mRNA from alignment at H-paniculata_contig4635:820..11540- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4635.11571.1 ID=mRNA_H-paniculata_contig4635.11571.1|Name=mRNA_H-paniculata_contig4635.11571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10721bp|location=Sequence derived from alignment at H-paniculata_contig4635:820..11540- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4635:820..11540- >mRNA_H-paniculata_contig4635.11571.1 ID=mRNA_H-paniculata_contig4635.11571.1|Name=mRNA_H-paniculata_contig4635.11571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3864bp|location=Sequence derived from alignment at H-paniculata_contig4635:820..11540- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |