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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 1843 |
| Cds size | 1839 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4620.11541.1 >prot_H-paniculata_contig4620.11541.1 ID=prot_H-paniculata_contig4620.11541.1|Name=mRNA_H-paniculata_contig4620.11541.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=613bp
RDGGYDVLEQSFMLSDSEDEEEDENEDEDEEWLPGANQPSKKRSSHTSTS
SSSAARQSEDGGVNDRPLFDSSLLSGSNGGGDSNGGGDSNGGGDSNSGGD
SSRTSIESLEEGSDSVIEGDEARRPSGDLGGRSSSEADSSREGDKDTKLD
SICGVSKPRREIINWSNLDLYTVVQLKEFLRYYQLPVSGKKEVLIVRLTT
ALNAPSPERGPPSLALREAFDTSDSFNASSPERRSPSPVTREIFDLPVSS
FAPSGVPEGTSEEALDTPPVGQHPTASRSSLSESGGTDGLRARKDVAAAG
DVPSPEKNTRDSKKCSLRERLQARAKDRDPPQEAVVARQAEKRDNNNVSR
TLGRNGNGNGNGSGSGNDGNGNGNGNGNGNGNGNGNGNGNCISNDAGSSS
GDRSRVRLASPATAACASTATVAMTGRMTSTPARKPLGVLNSGPSLIGNR
PKSASNATVVKAAGGGGLTTSSKRVTADGSRASGIRSSSAPKSTISSTPV
LTSASAKGERPPQQRRPNPAGSTSSTATALSARAGAASSHGVARKGIKRS
APGGNSVGTASDGRSSSASSGSSSSGSSGNYNNNSRSDSQPELSGANAKQ
KIKRTKVDGRGTG back to topmRNA from alignment at H-paniculata_contig4620:2347..5889- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4620.11541.1 ID=mRNA_H-paniculata_contig4620.11541.1|Name=mRNA_H-paniculata_contig4620.11541.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3543bp|location=Sequence derived from alignment at H-paniculata_contig4620:2347..5889- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGTGATGGCGGATACGATGTCTTGGAGCAGAGTTTCATGCTTAGCGACAG
TGAAGACGAGGAAGAAGACGAAAATGAGGATGAAGATGAAGAATGGTTGC
CCGGTGAGTCAGTCTCTGTCTCTGTCTTTCTTTGTCTGCATACATGCCGT
ACTTCTACGCATAGGGGCACAGAGCAATTATTGACAGCCGCTCATGAAAG
ATGGGAGCCAGCTTTTCATGAGCAGCTGTTTATTGTTGTTGGTGTTAATG
GTGGAGGTGGTGGAGGTGGTGGTTGTGTCGGTGTCGGTATCGGTGGTGGC
GTACGAAGACATCGTGTGGTACTATACTAGGATAACGTGTATGTTGAGGA
TGAAACCTATTTTGGTGTGCATCAGGAGGATTGCTTCCTGCCAAGTCTGT
GACGGTATACTAGTCTTCTGGGAAGGGAATTATTTGCCACAAGAACAAAT
TGTTTGCTCATTGAATCAGTCAATCACATCTCGAAGCTATTCCCCCGGTT
CTGGCCTAATGAAATACTTGACTGGGCTCCTCGCTACCGCTCCCCTGCCC
AGGCGCGAACCAACCCAGCAAGAAGCGCTCATCCCACACCTCGACTTCGT
CGTCCTCAGCCGCAAGACAAAGTGAAGATGGAGGGGTAAATGACCGTCCC
CTGTTCGACAGCAGCCTACTTAGTGGTAGCAACGGCGGCGGTGACAGCAA
CGGCGGCGGTGACAGCAACGGCGGCGGTGACAGCAACAGCGGAGGTGACA
GCAGCAGGACCAGTATCGAAAGCTTAGAGGAAGGCAGCGACTCAGTTATA
GAGGGAGATGAAGCTCGCCGTCCGTCAGGTGACTTGGGTGGCCGGTCGTC
TTCGGAAGCAGACTCATCTCGCGAGGGAGACAAGGACACCAAGTTGGATT
CGATTTGCGGGGTCTCTAAGCCAAGGAGAGAGATCATCAACTGGAGTAAC
CTTGACCTGTACACGGTGAGGAGAGGTTCGTGTTGTTGCAGTTACCCAAG
TCCCGACTTCTACGTAGTCCATATATCACCATAGGATTGAAAGCAAAGGG
GTTTGGTACCTTGCGAGGAATAGGCGTTGAAGACTGAGCGAAATTGAGGG
CGCTTCGTAGCAGGGTGTAAAATTATGTGATGAATCCGGCGATTTCGCTT
CTATATCCTAGAAAATAGCACATCCGCCGACAGGTAAATTCCCAAAATGG
CGCCTTGCCGCCGGGAGAAAAAAATGGGTCGGGGTACTCTCCACTGTAAG
GTATTTTTTTTTGTAGACCATGTTTTTCTTTCGCCATGAGGCTATTTCTC
TTTTTTTGAGAGTATTATTTTTTTTTATCTCGCGTGTTGAAGTTTTGTTT
TCCACCATCTCTCGTTATCGGGTTGTTCTTGCTTCCGTTTCATGCAAACT
TGGCTACCAATGGTAGGTACGCATGTTGTATAAACACTGTACTGTGCAAG
TAATACGTTCGTGCAGTCCACTGTCCGTGGGAGAGTCGTTACCCGCCAGA
AAGTTTACATAAATGTTTAGAAGTTCAAGTAACCCGCAAGAAAGTCAACG
CAAAACCATTTAATTATTTGAATGTAATGCATTAGTATGTGAAACAAATC
AAATCAGCGCGTGAGTTGAATGCACAACAAAGAAGTACCTTGCTCCGTGC
CTCCTGCGGTGGCTGCCAGCTGTACACAATCTGTACACGTTTTTGCATCG
GATGCAGCTCTGCCTCCTCTGTAACCTGTCCTTCGAATATCGATTGAAAA
AGGCACGAAGTTTCAACAAAATGTGACCAAAAATGACTTGGTTTCCCGAA
AATTCCCTCCGTGAAGGGTGCCTTCGTGGAGCTGGCGCGGCCGCCCGCCG
ATGCCTGCGGCGAAGTTGTCGCCGTCTTTAGTTGTGGGCATTATATATCC
TAGTTGGTAGGGTGCTGTGTTGTCAAGATGATGACGCCATGACTATGACC
GCACGGTTCTCTTCGTGTATGTCGTTCGTTCACCGGCATGGCCATCGTGT
TTTTTCAATTCGCTTTCGCTGTGTTTGCGTATGCGGTGTCTCTATTTACG
ACTCGGCCGTTGTTTTTGTTATTGTCGTAAAAAAGGATGCTCGTCACCCC
TTACTCAATTCCATGTCCACGATAAATTAATGTCGTTTGTTTGCCCCCCT
GCCTTGGTTCGCACCCGTATGTGCCATTTTTTTCATTTATTTTTTTGCAC
CAGGTGGTTCAGTTGAAGGAATTCCTGCGCTACTACCAGCTTCCCGTCTC
CGGGAAGAAAGAGGTGCTCATCGTGCGCCTGACAACGGCGTTGAATGCAC
CCTCACCAGAGCGCGGGCCGCCCTCTCTCGCGTTGAGGGAAGCCTTCGAT
ACGTCCGACTCGTTTAACGCTTCCTCACCCGAGCGCAGATCCCCGTCCCC
CGTCACACGGGAAATCTTCGATTTGCCTGTGTCTTCATTTGCTCCCTCGG
GTGTTCCCGAGGGCACTTCTGAAGAAGCGTTGGACACCCCCCCTGTCGGT
CAACACCCCACAGCGTCTCGCTCCTCCCTCTCTGAGAGCGGCGGCACCGA
CGGCTTGCGTGCCAGAAAAGATGTTGCCGCCGCTGGCGACGTGCCGTCGC
CAGAGAAAAACACCCGTGATTCCAAGAAATGCTCTCTCCGCGAGCGACTC
CAGGCGAGGGCTAAGGACAGAGATCCTCCCCAAGAAGCTGTTGTGGCCCG
TCAGGCTGAAAAGAGGGATAATAACAACGTCTCCCGAACGCTGGGCCGTA
ATGGTAACGGTAACGGTAACGGCAGCGGTAGCGGTAACGGCAACGGCAAC
GGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGG
CAACGGCAACGGCAACGGTAATTGCATCAGCAATGATGCAGGGTCTTCTT
CGGGAGATCGATCTCGGGTGCGTTTGGCTTCGCCGGCTACTGCGGCTTGC
GCCTCCACCGCCACCGTTGCGATGACGGGGAGGATGACGAGTACTCCGGC
AAGGAAGCCATTGGGTGTGCTTAACAGCGGGCCTAGTTTAATCGGCAACA
GGCCGAAGAGCGCAAGCAACGCAACTGTGGTGAAGGCAGCGGGAGGAGGA
GGACTCACAACAAGCTCGAAGAGAGTCACTGCGGACGGTAGTCGCGCGAG
CGGTATTCGATCTTCGTCGGCCCCCAAATCCACCATCTCCTCAACTCCCG
TTTTGACGTCGGCCTCTGCGAAAGGAGAGAGACCTCCGCAGCAACGGAGA
CCGAATCCCGCAGGTTCCACCAGTAGTACCGCAACGGCACTCTCCGCGCG
CGCAGGAGCTGCATCTTCTCATGGTGTTGCACGCAAGGGGATCAAAAGGT
CCGCTCCGGGCGGCAACTCCGTCGGAACTGCGAGCGATGGACGGAGCAGT
TCTGCGAGCAGCGGCAGCAGCAGCAGCGGCAGCAGTGGCAATTACAACAA
CAACAGTCGTTCGGACAGCCAGCCGGAGTTGAGTGGAGCAAATGCGAAGC
AGAAAATTAAACGCACGAAGGTGGACGGACGCGGTACCGGCGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig4620:2347..5889- >mRNA_H-paniculata_contig4620.11541.1 ID=mRNA_H-paniculata_contig4620.11541.1|Name=mRNA_H-paniculata_contig4620.11541.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3678bp|location=Sequence derived from alignment at H-paniculata_contig4620:2347..5889- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGTGATGGCGGATACGATGTCTTGGAGCAGAGTTTCATGCTTAGCGACAG
TGAAGACGAGGAAGAAGACGAAAATGAGGATGAAGATGAAGAATGGTTGC
CCGCGTGATGGCGGATACGATGTCTTGGAGCAGAGTTTCATGCTTAGCGA
CAGTGAAGACGAGGAAGAAGACGAAAATGAGGATGAAGATGAAGAATGGT
TGCCCGGCGCGAACCAACCCAGCAAGAAGCGCTCATCCCACACCTCGACT
TCGTCGTCCTCAGCCGCAAGACAAAGTGAAGATGGAGGGGTAAATGACCG
TCCCCTGTTCGACAGCAGCCTACTTAGTGGTAGCAACGGCGGCGGTGACA
GCAACGGCGGCGGTGACAGCAACGGCGGCGGTGACAGCAACAGCGGAGGT
GACAGCAGCAGGACCAGTATCGAAAGCTTAGAGGAAGGCAGCGACTCAGT
TATAGAGGGAGATGAAGCTCGCCGTCCGTCAGGTGACTTGGGTGGCCGGT
CGTCTTCGGAAGCAGACTCATCTCGCGAGGGAGACAAGGACACCAAGTTG
GATTCGATTTGCGGGGTCTCTAAGCCAAGGAGAGAGATCATCAACTGGAG
TAACCTTGACCTGTACACGGCGCGAACCAACCCAGCAAGAAGCGCTCATC
CCACACCTCGACTTCGTCGTCCTCAGCCGCAAGACAAAGTGAAGATGGAG
GGGTAAATGACCGTCCCCTGTTCGACAGCAGCCTACTTAGTGGTAGCAAC
GGCGGCGGTGACAGCAACGGCGGCGGTGACAGCAACGGCGGCGGTGACAG
CAACAGCGGAGGTGACAGCAGCAGGACCAGTATCGAAAGCTTAGAGGAAG
GCAGCGACTCAGTTATAGAGGGAGATGAAGCTCGCCGTCCGTCAGGTGAC
TTGGGTGGCCGGTCGTCTTCGGAAGCAGACTCATCTCGCGAGGGAGACAA
GGACACCAAGTTGGATTCGATTTGCGGGGTCTCTAAGCCAAGGAGAGAGA
TCATCAACTGGAGTAACCTTGACCTGTACACGGTGGTTCAGTTGAAGGAA
TTCCTGCGCTACTACCAGCTTCCCGTCTCCGGGAAGAAAGAGGTGCTCAT
CGTGCGCCTGACAACGGCGTTGAATGCACCCTCACCAGAGCGCGGGCCGC
CCTCTCTCGCGTTGAGGGAAGCCTTCGATACGTCCGACTCGTTTAACGCT
TCCTCACCCGAGCGCAGATCCCCGTCCCCCGTCACACGGGAAATCTTCGA
TTTGCCTGTGTCTTCATTTGCTCCCTCGGGTGTTCCCGAGGGCACTTCTG
AAGAAGCGTTGGACACCCCCCCTGTCGGTCAACACCCCACAGCGTCTCGC
TCCTCCCTCTCTGAGAGCGGCGGCACCGACGGCTTGCGTGCCAGAAAAGA
TGTTGCCGCCGCTGGCGACGTGCCGTCGCCAGAGAAAAACACCCGTGATT
CCAAGAAATGCTCTCTCCGCGAGCGACTCCAGGCGAGGGCTAAGGACAGA
GATCCTCCCCAAGAAGCTGTTGTGGCCCGTCAGGCTGAAAAGAGGGATAA
TAACAACGTCTCCCGAACGCTGGGCCGTAATGGTAACGGTAACGGTAACG
GCAGCGGTAGCGGTAACGGTGGTTCAGTTGAAGGAATTCCTGCGCTACTA
CCAGCTTCCCGTCTCCGGGAAGAAAGAGGTGCTCATCGTGCGCCTGACAA
CGGCGTTGAATGCACCCTCACCAGAGCGCGGGCCGCCCTCTCTCGCGTTG
AGGGAAGCCTTCGATACGTCCGACTCGTTTAACGCTTCCTCACCCGAGCG
CAGATCCCCGTCCCCCGTCACACGGGAAATCTTCGATTTGCCTGTGTCTT
CATTTGCTCCCTCGGGTGTTCCCGAGGGCACTTCTGAAGAAGCGTTGGAC
ACCCCCCCTGTCGGTCAACACCCCACAGCGTCTCGCTCCTCCCTCTCTGA
GAGCGGCGGCACCGACGGCTTGCGTGCCAGAAAAGATGTTGCCGCCGCTG
GCGACGTGCCGTCGCCAGAGAAAAACACCCGTGATTCCAAGAAATGCTCT
CTCCGCGAGCGACTCCAGGCGAGGGCTAAGGACAGAGATCCTCCCCAAGA
AGCTGTTGTGGCCCGTCAGGCTGAAAAGAGGGATAATAACAACGTCTCCC
GAACGCTGGGCCGTAATGGTAACGGTAACGGTAACGGCAGCGGTAGCGGT
AACGACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGG
CAACGGCAACGGCAACGGTAATTGCATCAGCAATGATGCAGGGTCTTCTT
CGGGAGATCGATCTCGGGTGCGTTTGGCTTCGCCGGCTACTGCGGCTTGC
GCCTCCACCGCCACCGTTGCGATGACGGGGAGGATGACGAGTACTCCGGC
AAGGAAGCCATTGGGTGTGCTTAACAGCGGGCCTAGTTTAATCGGCAACA
GGCCGAAGAGCGCAAGCAACGCAACTGTGGTGAAGGCAGCGGGAGGAGGA
GGACTCACAACAAGCTCGAAGAGAGTCACTGCGGACGGTAGTCGCGCGAG
CGGTATTCGATCTTCGTCGGCCCCCAAATCCACCATCTCCTCAACTCCCG
TTTTGACGTCGGCCTCTGCGAAAGGAGAGAGACCTCCGCAGCAACGGAGA
CCGAATCCCGCAGGTTCCACCAGTAGTACCGCAACGGCACTCTCCGCGCG
CGCAGGAGCTGCATCTTCTCATGGTGTTGCACGCAAGGGGATCAAAAGGT
CCGCTCCGGGCGGCAACTCCGTCGGAACTGCGAGCGATGGACGGAGCAGT
TCTGCGAGCAGCGGCAGCAGCAGCAGCGGCAGCAGTGGCAATTACAACAA
CAACAGTCGTTCGGACAGCCAGCCGGAGTTGAGTGGAGCAAATGCGAAGC
AGAAAATTAAACGCACGAAGGTGGACGGACGCGGTACCGGCACGGCAACG
GCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGC
AACGGTAATTGCATCAGCAATGATGCAGGGTCTTCTTCGGGAGATCGATC
TCGGGTGCGTTTGGCTTCGCCGGCTACTGCGGCTTGCGCCTCCACCGCCA
CCGTTGCGATGACGGGGAGGATGACGAGTACTCCGGCAAGGAAGCCATTG
GGTGTGCTTAACAGCGGGCCTAGTTTAATCGGCAACAGGCCGAAGAGCGC
AAGCAACGCAACTGTGGTGAAGGCAGCGGGAGGAGGAGGACTCACAACAA
GCTCGAAGAGAGTCACTGCGGACGGTAGTCGCGCGAGCGGTATTCGATCT
TCGTCGGCCCCCAAATCCACCATCTCCTCAACTCCCGTTTTGACGTCGGC
CTCTGCGAAAGGAGAGAGACCTCCGCAGCAACGGAGACCGAATCCCGCAG
GTTCCACCAGTAGTACCGCAACGGCACTCTCCGCGCGCGCAGGAGCTGCA
TCTTCTCATGGTGTTGCACGCAAGGGGATCAAAAGGTCCGCTCCGGGCGG
CAACTCCGTCGGAACTGCGAGCGATGGACGGAGCAGTTCTGCGAGCAGCG
GCAGCAGCAGCAGCGGCAGCAGTGGCAATTACAACAACAACAGTCGTTCG
GACAGCCAGCCGGAGTTGAGTGGAGCAAATGCGAAGCAGAAAATTAAACG
CACGAAGGTGGACGGACGCGGTACCGGC back to top
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