mRNA_H-paniculata_contig46.11502.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig46.11502.1 vs. uniprot
Match: A0A835YX65_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX65_9STRA) HSP 1 Score: 674 bits (1738), Expect = 6.240e-225 Identity = 352/583 (60.38%), Postives = 418/583 (71.70%), Query Frame = 2
Query: 539 KEEPRPRWEVLRMLNYLVIALFVCSITYVVFNYRTMS---HADSGN--AGLFPILVIWSGCMAYFFGFFGISFLDTNAMARSPSSFGLSHLDHQLYTSRDGPGTNGGFIGAAPGGDGVSQSTMCAKETPSLGLGKSSSSNVSVSAGGRVEGAIQDLPALGPIPEGDEFSSMTDDEVVMCVMSGKLKDHQLEMKLGDHARAVTVRRSLFERRIGR--SMANLPKEGMNYERIFGANCEIVCGYVPIPVGVVGPLLLNGDQVFVPMATTEGCLVASTNXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAAAIKEWCEAPENFDMIRDAFQSTTNFGKLKGLKVSVAGRNVYLRFVCFAGDAMGMNMISKGVLAVIDRLQEMFPEMELVAISGNMCTDKKSAAINWIEGRGKSIVCEARIPGKYVESTLKTTVXXXXXXXXXXXLVGSAMAGALGGFNAHASNVVTAVFLATGQDPAQNVESSTCLTLMEQMENGDLLVSVNMPSIEVGTIGGGTSLPGQAACLDIIGCRGATRAPGCPGDNAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRKKQ 2266
K EP PRWEVL +LNY V+ +F S+ YV FNYR +S A SG+ GL+PIL++W GC+AYFFGFFG+SFLD AM RSPS+FGL HLD GL SS + ++++D+EV V+SG +KDHQLE +LGDH RAV VRR +F R+GR ++ LP G +Y R+FGANCEIVCGYVP+PVG+VGPLLL+G +V+VPMATTEGCLVASTN + +LKDGITRAPCLRMPD + AA +K+W EAP NF ++ AF+STT+FG+L + +VAGRNVYLRFVC AGDAMGMNM+SKG LA +D L E FPE+EL+AISGNMCTDKK AAINWIEGRGKS+VCEARIPG+YVESTLKTTV L+GSA+AGALGGFNAHASNVVTAVFLATGQDPAQNVE+S C+TLME+ ++GDLLVSVNMP IEVGT+GGGTSLP QAACLD+IGCRGA++AP PG NA+Q+A+V+AAA LAGELSL+AALASNQLVRAHMQHNRKKQ
Sbjct: 20 KPEPLPRWEVLSVLNYFVVGVFAASLAYVAFNYRAVSSDMQAGSGSKGGGLYPILLVWCGCLAYFFGFFGVSFLDKEAMQRSPSTFGLGHLD--------------------------------------AGLAPSSPRARXXXXXXXXXXXXXXXXXXXXXXXXTDLAALSDEEVAEAVLSGAVKDHQLEPRLGDHTRAVAVRRRVFAARLGRDDALRALPHAGYDYARVFGANCEIVCGYVPLPVGIVGPLLLDGREVYVPMATTEGCLVASTNRGCKAISQGGGARSVVLKDGITRAPCLRMPDTIGAARVKQWVEAPANFARVKAAFESTTSFGRLNAVTGAVAGRNVYLRFVCAAGDAMGMNMVSKGCLAAVDLLTEAFPELELIAISGNMCTDKKPAAINWIEGRGKSVVCEARIPGRYVESTLKTTVRAIVETNVQKNLIGSALAGALGGFNAHASNVVTAVFLATGQDPAQNVEASMCMTLMEETDDGDLLVSVNMPCIEVGTVGGGTSLPAQAACLDVIGCRGASQAPDAPGANARQLAQVIAAAVLAGELSLMAALASNQLVRAHMQHNRKKQ 564
BLAST of mRNA_H-paniculata_contig46.11502.1 vs. uniprot
Match: D7FUE1_ECTSI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE1_ECTSI) HSP 1 Score: 647 bits (1668), Expect = 1.340e-211 Identity = 346/496 (69.76%), Postives = 391/496 (78.83%), Query Frame = 2
Query: 356 MSTFQMPAEQFLEQAFREGARFLISNASVLSGSVLAFVVFAAMTRMFSDSEEDRPTNAKRVKEEPRPRWEVLRMLNYLVIALFVCSITYVVFNYRTMSHADSGNAGLFPILVIWSGCMAYFFGFFGISFLDTNAMARSPSSFGLSHLDHQLYTSRDGPGTNGGFIGAAPGGDGVSQSTMCAKETPSLGLGKSSSSNVSVSAGGRVEGAIQDL--------PALGPIPEGDEFSSMTDDEVVMCVMSGKLKDHQLEMKLGDHARAVTVRRSLFERRIGRSMANLPKEGMNYERIFGANCEIVCGYVPIPVGVVGPLLLNGDQVFVPMATTEGCLVASTNXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAAAIKEWCEAPENFDMIRDAFQSTTNFGKLKGLKVSVAGRNVYLRFVCFAGDAMGMNMISKGVLAVIDRLQEMFPEMELVAISGNMCTDKKSAAINWIEGRGKSIVCEARIPGKYVESTLKTTV 1819
MST + + +A REG FL++NASVLS + +AFV F+AMTR+FSDS ++RP K+ EPRPRWEVLR+LNYLVI LFVCSITYVVFNYRTMSHA++GN GLFPILVIWS CMAYFFGFFGISFLDT+AM RSPSSFGLSHLD LY S P S TMC KETP L PALGP+P+G+++S+MTD+EV CV++GKLKDHQLE KLGDHARAV VRRSLFERRIGRSM +LP EG +YERIFGANCEIVCGY+PIPVG+VGPL LNG +V+VPMATTEGCLVAST XXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAA +K+W E P+NF+ I+ AFQ+TT FGKL+GL +VAGRNVYLRF CFAGDAMGMNM+SKGVLAV+D LQ+ FPEMELVAISGNMCTDKKSAAINW+EGRGKSIVCEARIPGK+VE+TLKTTV
Sbjct: 1 MSTVSQDLQALVVKASREGGLFLMANASVLSAAAIAFVFFSAMTRLFSDSSDERPV--KQRPAEPRPRWEVLRVLNYLVIGLFVCSITYVVFNYRTMSHAENGNGGLFPILVIWSVCMAYFFGFFGISFLDTSAMERSPSSFGLSHLDTHLYASERKRAVQ---FAEPPAKGSASNGTMCGKETPQLASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPALGPVPDGEDYSTMTDEEVAACVVTGKLKDHQLEKKLGDHARAVVVRRSLFERRIGRSMESLPVEGYDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPDNFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQKEFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTV 491
BLAST of mRNA_H-paniculata_contig46.11502.1 vs. uniprot
Match: A0A7S3GVF0_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVF0_9STRA) HSP 1 Score: 577 bits (1487), Expect = 8.130e-187 Identity = 324/601 (53.91%), Postives = 424/601 (70.55%), Query Frame = 2
Query: 524 NAKRVKEEPRPRWEVLRMLNYLVIALFVCSITYVVFNYR-TMSHADSGNAGL----FPILVIWSGCMAYFFGFFGISFLDTNAMARSPSSFGLSHLDH--QLYTSRDGPG-------TNGGF--IGAAPGGDGVSQSTMCAKETPSLGLGKSSSSNVSVSAGGRVEGAI--QDLPALGPIPEGDE--FSSMTDDEVVMCVMSGKLKDHQLEMKLGDHARAVTVRRSLFERRIGRSMANLPKEGMNYERIFGANCEIVCGYVPIPVGVVGPLLLNGDQVFVPMATTEGCLVASTNXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAAAIKEWCEAPENFDMIRDAFQSTTNFGKLKGLKVSVAGRNVYLRFVCFAGDAMGMNMISKGVLAVIDRLQEMFPEMELVAISGNMCTDKKSAAINWIEGRGKSIVCEARIPGKYVESTLKTTVXXXXXXXXXXXLVGSAMAGALGGFNAHASNVVTAVFLATGQDPAQNVESSTCLTLMEQMENGDLL-VSVNMPSIEVGTIGGGTSLPGQAACLDIIGCRGATRAPGC-PGDNAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRK 2260
++K +K P+W VL+ +N +V+A+FV SI Y+V NYR ++S + + FP++V+WS C+AYFFGFFGISF+DT ++ SPS++GL H + + + P TN F + AP + +T+ TP G ++S+ + R +G I PA P D+ F+ + D+EV+ +++G LKD+QLE KLGD+ RAV VRRSL+E + + ++ +P G +Y ++FGANCEIV GYVP+P+G+ GPL++NG+ V++PMATTEGCLVASTNXXXXXXXXXXXX + ++KD ITRAPCLRMP AM AAA+K W PEN+ ++ AF STTN+GKL G++ +VAGRNVYLRF C +GDAMGMNM+SKG L ID LQ FP++ L+AISGNMCTDKK AAINWI GRGKS+V EA IP V S LK+ V +GSAMAGA+GGFNA A+N+VTA++LATGQDPAQNVESS CLT+ME E+G + VSV MPSIEVGT+GGGT LP QA CL+I G RGA + PG PGDNA+++A++V AA LA ELSL+AALA+N LV +HMQHNRK
Sbjct: 7 SSKPLKPASEPKWAVLQAMNVIVLAVFVGSIAYMVVNYRNSLSQPTESPSPITNMFFPMMVLWSCCLAYFFGFFGISFVDTKVLSESPSTYGLQHFPQPGESESEEEEPANQETKAKTNAPFGSLYVAP-----THNTLSQNFTPGAGFNAPATSHTA-----RSDGPICSDKRPATTPAVSADDIDFTVLADEEVLGHLITGTLKDYQLEKKLGDYERAVAVRRSLYEHVLEKDLSLIPHTGYDYNKVFGANCEIVIGYVPLPLGLAGPLIINGEPVYIPMATTEGCLVASTNXXXXXXXXXXXXYSVVMKDAITRAPCLRMPSAMRAAAVKRWVGVPENYALLEQAFNSTTNYGKLAGVEATVAGRNVYLRFNCMSGDAMGMNMVSKGCLKAIDVLQAQFPDLVLIAISGNMCTDKKPAAINWILGRGKSVVVEAIIPESVVTSVLKSNVAAMIEANTQKNHIGSAMAGAIGGFNAQAANIVTAIYLATGQDPAQNVESSNCLTIMEYAEDGKSMHVSVTMPSIEVGTVGGGTHLPAQAGCLEICGVRGAAKGPGAQPGDNARKLAQIVGAAVLAAELSLMAALAANHLVNSHMQHNRK 597
BLAST of mRNA_H-paniculata_contig46.11502.1 vs. uniprot
Match: A0A6H5KHX7_9PHAE (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX7_9PHAE) HSP 1 Score: 513 bits (1322), Expect = 1.100e-166 Identity = 276/348 (79.31%), Postives = 303/348 (87.07%), Query Frame = 2
Query: 1166 SMANLPKEGMNYERIFGANCEIVCGYVPIPVGVVGPLLLNGDQVFVPMATTEGCLVASTNXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAAAIKEWCEAPENFDMIRDAFQSTTNFGKLKGLKVSVAGRNVYLRFVCFAGDAMGMNMISKGVLAVIDRLQEMFPEMELVAISGNMCTDKKSAAINWIEGRGKSIVCEARIPGKYVESTLKTTVXXXXXXXXXXX---------------LVGSAMAGALGGFNAHASNVVTAVFLATGQDPAQNVESSTCLTLMEQMENGDLLVSVNMPSIEVGTIGGGTSLPGQAACLDIIGCRGATRAPGCPGDNAQQMAK 2164
S+A LP +G +YERIFGANCEIVCGY+PIPVG+VGPL LNG +V+VPMATTEGCLVAST XXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAA +K+W E PENF+ I+ AFQ+TT FGKL+GL +VAGRNVYLRF CFAGDAMGMNM+SKGVLAV+D LQE FPEMELVAISGNMCTDKKSAAINW+EGRGKSIVCEARIPGK+VE+TLKTTV LVGSAMAGALGGFNAHASN+VTAVFLATGQDPAQNVESSTC+TLME+M+NGDLLVSVNMPSIEVGT+GGGTSLP QAACLDI+GCRGAT+APG PG+NAQQMAK
Sbjct: 10 SLAILP-QGYDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSETPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEEFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVKARAKGTTNSIELLFSAMVETNIQKNLVGSAMAGALGGFNAHASNIVTAVFLATGQDPAQNVESSTCITLMEEMDNGDLLVSVNMPSIEVGTVGGGTSLPAQAACLDIVGCRGATQAPGRPGENAQQMAK 356
BLAST of mRNA_H-paniculata_contig46.11502.1 vs. uniprot
Match: A0A7S4ALR6_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALR6_9STRA) HSP 1 Score: 522 bits (1344), Expect = 9.480e-166 Identity = 295/584 (50.51%), Postives = 370/584 (63.36%), Query Frame = 2
Query: 551 RPRWEVLRMLNYLVIALFVCSITYVVFNYRTMSHADSGNAGLFPILVIWSGCMAYFFGFFGISFLDTNAMARSPSSFGLSHLDHQLYTSRDGPGTNGGFIGAAPGGDGVSQSTMCAKETPSLGLGKSSSSNVSVSAGGRVEGAIQDLPALGPIPEGDEFSSMTDDEVVMCVMSGKLKDHQLEMKLGDHARAVTVRRSLFERRI----GRSMAN------LPKE-GMNYERIFGANCEIVCGYVPIPVGVVGPLLLNGDQVFVPMATTEGCLVASTNXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAAAIKEWCEAPENFDMIRDAFQSTTNFGKLKGLKVSVAGRNVYLRFVCFAGDAMGMNMISKGVLAVIDRLQEMFPEMELVAISGNMCTDKKSAAINWIEGRGKSIVCEARIPGKYVESTLKTTVXXXXXXXXXXXLVGSAMAGALGGFNAHASNVVTAVFLATGQDPAQNVESSTCLTLMEQMENGDLLVSVNMPSIEVGTIGGGTSLPGQAACLDIIGCRGATRAPGCPGDNAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRKKQP 2269
+P+W + + +N++ +A F+CS+ N H D L LV WS + YFFGFFG+SF+ + + L T+ N + V CA +SS + LP D+ + D+E+ V+S K+KDH LE KL D RAVTVRR +++ GR N LP E ++Y R+ GANCEIV GY+P+PVG+VGPL +NG+ V+VPMATTEGCLVAS+N A +++DGITRAPCLRM AM AA +K WCE P NF +++ AF+STT+FGKLK +VAG+NVYLR VCF+GDAMGMNMISKG LAVI+ LQ+ FP +LVA+SGNMCTDKK+AA NW+ GRGKS+V E IP + V +TLKTTV L+GSAMAGA+GGFNAHASN+VTAVFLATGQDPAQNVESS C+TLME+ +NGDL + MPSIEVGT+GGGTSLP QAACL+ IGC+G PG NAQ++A VVAAAT+AGELSL+AALA+N LV+AHM HNRK P
Sbjct: 78 QPKWHIFKWINFVAVAAFLCSVFTFCSNASQYLH-DESQGVLVQFLVGWSVFLMYFFGFFGVSFIHEDIPREEVDVIPSKPQNKSLSTNNISHNKNKN--NSISNKKSVHPPAACAPVCSDPSSFRSSK--------------VASLP--------DDLKELGDEEIANLVLSNKIKDHMLE-KLLDPFRAVTVRRIACNQKLASVHGRDQQNGNVLDKLPSEPSLDYSRVHGANCEIVVGYIPLPVGLVGPLTINGESVYVPMATTEGCLVASSNRGAKAITQGGGAKARIVRDGITRAPCLRMDSAMEAADLKIWCEQPSNFAVLKKAFESTTSFGKLKECNPTVAGKNVYLRLVCFSGDAMGMNMISKGSLAVIETLQDKFPSCKLVALSGNMCTDKKAAATNWLLGRGKSVVVECVIPKEVVRTTLKTTVAALVHTNINKNLIGSAMAGAIGGFNAHASNIVTAVFLATGQDPAQNVESSNCITLMEEQDNGDLWICCTMPSIEVGTVGGGTSLPAQAACLEAIGCKGGGSTPGA---NAQKLATVVAAATMAGELSLLAALAANTLVQAHMVHNRKPAP 632
BLAST of mRNA_H-paniculata_contig46.11502.1 vs. uniprot
Match: A0A7S1Y0Q7_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Q7_9STRA) HSP 1 Score: 512 bits (1318), Expect = 1.110e-164 Identity = 267/424 (62.97%), Postives = 319/424 (75.24%), Query Frame = 2
Query: 1022 EFSSMTDDEVVMCVMSGKLKDHQLEMKLGDHARAVTVRRSLFERRIGRS--MANLPKEGMNYERIFGANCEIVCGYVPIPVGVVGPLLLNGDQVFVPMATTEGCLVASTNXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAAAIKEWCEAPENFDMIRDAFQSTTNFGKLKGLKVSVAGRNVYLRFVCFAGDAMGMNMISKGVLAVIDRLQEMFPEMELVAISGNMCTDKKSAAINWIEGRGKSIVCEARIPGKYVESTLKTTVXXXXXXXXXXXLVGSAMAGALGGFNAHASNVVTAVFLATGQDPAQNVESSTCLTLMEQME-----NGDLLVSVNMPSIEVGTIGGGTSLPGQAACLDIIGCRGATRAPGCPGDNAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRKKQPT 2272
E + + D+E+V V +G +KDH LE KLGD RAV VRR+L+ERR+G + LP + +YERIFGANCEIV GYVP+P GVVGPLLL+G+ V+VPMATTEGCLVASTN A +LKDGITRAPC+ MP AMAAA +K W E PENF I++AF STT+FG+LK ++AGRNVYLR VCFAGDAMGMNM+SKG L VI+ L+E FPEMELVAISGN+C DKK AAINWIEGRGKS+V EA I V TLKTTV L+GSAMAG++GGFNAHA+N+V A FLATGQDPAQ VES+ C+TLME+++ LL+S MPS+EVGT+GGGTSLP Q ACL+++ GA+RAP PG NAQ ++K +A A LAGE+SL+AALASNQLVRAHM HNRKK PT
Sbjct: 24 ELAVLPDEELVRMVEAGAIKDHALEKKLGDFNRAVKVRRTLYERRMGNAGVFEKLPVDHFDYERIFGANCEIVVGYVPLPCGVVGPLLLDGEPVYVPMATTEGCLVASTNRGCKAITACGGARARVLKDGITRAPCILMPSAMAAADLKAWVEEPENFQAIQNAFNSTTSFGRLKSCTPTIAGRNVYLRCVCFAGDAMGMNMVSKGCLKVIELLEEHFPEMELVAISGNVCCDKKPAAINWIEGRGKSVVVEATITADVVRKTLKTTVEAMVEANRQKCLIGSAMAGSVGGFNAHAANIVAAAFLATGQDPAQVVESANCITLMEKIDIPGEAEPGLLMSCTMPSLEVGTVGGGTSLPAQRACLEVMNVAGASRAPKAPGTNAQALSKAIAGAVLAGEMSLMAALASNQLVRAHMIHNRKKAPT 447
BLAST of mRNA_H-paniculata_contig46.11502.1 vs. uniprot
Match: A0A7S2I1A6_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I1A6_9STRA) HSP 1 Score: 506 bits (1304), Expect = 1.690e-161 Identity = 291/558 (52.15%), Postives = 363/558 (65.05%), Query Frame = 2
Query: 647 SHADSGNAGLFPILVIWSGCMAYFFGFFGISFLDTNAMARS---------PSSFGLSHLDHQLYTSRDGPGTNGGFIGAAPGGDGVSQSTMCAKETPSLGLGKSSSSNVSVSAGGRVEGAIQDLPALGPIPEGDEFSSMTDDEVVMCVMSGKLKDHQLEMKLGDHARAVTVRRSLFERRI-----GRSMANLPK-EGMNYERIFGANCEIVCGYVPIPVGVVGPLLLNGDQVFVPMATTEGCLVASTNXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAAAIKEWCEAPENFDMIRDAFQSTTNFGKLKGLKVSVAGRNVYLRFVCFAGDAMGMNMISKGVLAVIDRLQEMFPEMELVAISGNMCTDKKSAAINWIEGRGKSIVCEARIPGKYVESTLKTTVXXXXXXXXXXXLVGSAMAGALGGFNAHASNVVTAVFLATGQDPAQNVESSTCLTLMEQMENGDLLVSVNMPSIEVGTIGGGTSLPGQAACLDIIGCRGATRAPGCPGDNAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRKKQPTA 2275
S + ++ LF L WS + YFFGFFGISF+D + + + P S S Q++ + G+AP +C+ SS SV+ E D+E+ V++G++KDHQLE KL D RAV VRR+ F+ ++ G ++ +LP ++Y R+FGANCEIV GYVPIPVG+VGPL LNG V++PMATTEGCLVASTN + +L+DGITRAPC+RM A AA +K WCE P NF ++ AF+STT+FGKL ++ +VAG+NVYLR CFAGDAMGMNM+SKG LAVID L+++FP+++LVA+SGNMCTDKK+AA NWI GRGKS+V EA IP V STLKTTV LVGSAMAGA+GGFNAHA+N VTAVFLATGQDPAQNVESS C+TL+E+ E GDL + MPSIEVGT+GGGT LP QAACL IGC+G +PG DNA+Q+A VVAAAT+AGELSL+AALA+N LV+AHM HNRK PTA
Sbjct: 15 SRHMNDSSSLFKFLFAWSVFLCYFFGFFGISFVDADDILATEEPIFSQVQPESASRSKKLKQVHPA----------AGSAP---------VCSVP--------SSFEKASVNKA--------------------ELKEKADEELARMVLAGQIKDHQLE-KLLDPRRAVDVRRAAFDSKLSTVGCGGALKDLPSGPSLDYSRVFGANCEIVVGYVPIPVGMVGPLTLNGQTVYIPMATTEGCLVASTNRGCKAITQGSGATSVILRDGITRAPCVRMSSAKQAADLKLWCEQPNNFATLKQAFESTTSFGKLLTVEPTVAGKNVYLRLQCFAGDAMGMNMVSKGSLAVIDHLKQVFPDLDLVALSGNMCTDKKAAATNWIHGRGKSVVIEATIPNHIVRSTLKTTVQAIVQTNINKNLVGSAMAGAIGGFNAHAANNVTAVFLATGQDPAQNVESSNCITLLEETEQGDLWICCTMPSIEVGTVGGGTGLPAQAACLKAIGCKGGGASPG---DNAKQLAHVVAAATMAGELSLLAALAANTLVQAHMTHNRK--PTA 519
BLAST of mRNA_H-paniculata_contig46.11502.1 vs. uniprot
Match: A0A1Z5KS57_FISSO (3-hydroxy-3-methylglutaryl coenzyme A reductase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS57_FISSO) HSP 1 Score: 509 bits (1311), Expect = 2.820e-161 Identity = 303/650 (46.62%), Postives = 390/650 (60.00%), Query Frame = 2
Query: 419 FLISNASVLSGSVLAFVVFAAMTRMFSDSEEDRP----TNAKRV---KEEPRPRWEVLRMLNYLVIALFVCSITYVVFNYRTMSHADSGNAGLFPILVIWSGCMAYFFGFFGISFLDTNAMARSPSSFGLSHLDHQLYTSRDGPGTNGGFIGAAPGGDGVSQSTMCAKETPSLGLGKSSSSNVSVSAGGRVEGAIQDLPALGPIPEGDEFSSMTDDEVVMCVMSGKLKDHQLEMKLGDHARAVTVRRSLFERRIGR-----SMANLPKE-GMNYERIFGANCEIVCGYVPIPVGVVGPLLLNGDQVFVPMATTEGCLVASTNXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAAAIKEWCEAPENFDMIRDAFQSTTNFGKLKGLKVSVAGRNVYLRFVCFAGDAMGMNMISKGVLAVIDRLQEMFPEMELVAISGNMCTDKKSAAINWIEGRGKSIVCEARIPGKYVESTLKTTVXXXXXXXXXXXLVGSAMAGALGGFNAHASNVVTAVFLATGQDPAQNVESSTCLTLMEQMENGDLLVSVNMPSIEVGTIGGGTSLPGQAACLDIIGCRGATRAPGCPGDNAQQMAKVVAAATLAGELSLVAALASN-----------------------QLVRAHMQHNRK 2260
F+ +++ L G ++ VF + + + P T +RV KE P P+W + R +N LV+ F CS+ N + A N L L+ WS + YFFGFFG+ F+ H L S ET S + KSS + S+ AIQ I E + D E+ V + ++KDH+LE +L H RAVTVRR + E+++ ++ LP E ++Y R+ GANCEIV GYVP+PVG++GPL +NG+ ++PMATTEGCLVASTN A +++DGITRAPC+RMP AMAAA +K WCE PENF ++ AF+STT+FGKL K ++AG+NVYLR VCF+GDAMGMNM+SKG LAVI+ L++ FPE+ LVA+SGNMCTDKK+AA NW+EGRGKS+V EA IP V TLKTTV LVGSAMAG +GGFNAHASN+V+A+FLATGQDPAQNVESS C+TLME+ E+GDL +S MPSIEVGT+GGGTSL QAACL +GC+G PG DNAQ++AKV+A+AT+AGELSL+AALA+N +V AHMQHNRK
Sbjct: 15 FVSVSSNQLYGVIVGVTVFGCWGILSLAEQPELPEWQKTAVQRVPRQKEGPEPQWHLFRWINMLVVVAFACSVAEFSLN----ATAYDSNV-LCQFLMAWSLLLCYFFGFFGVMFV------------------HDLEDS----------------------------ETVSTPVTKSSKIHPPASSTPICSDAIQSKQNKLLIIE--DIKDKKDAEIAQLVFTNQIKDHELEKQLDCH-RAVTVRRLVVEQKLASLGHSGALEGLPYETDLDYSRVHGANCEIVVGYVPLPVGIIGPLTINGESFYIPMATTEGCLVASTNRGAKAITEGGGALAQIVRDGITRAPCIRMPTAMAAAQLKLWCETPENFVQMKAAFESTTSFGKLHECKATIAGKNVYLRLVCFSGDAMGMNMVSKGTLAVIECLRKEFPELSLVALSGNMCTDKKAAATNWLEGRGKSVVVEATIPKDVVRKTLKTTVPAIVETNLNKNLVGSAMAGVIGGFNAHASNIVSAIFLATGQDPAQNVESSNCITLMEETESGDLWISCTMPSIEVGTVGGGTSLAAQAACLKALGCQGGGANPG---DNAQRLAKVIASATMAGELSLLAALAANTCTYLLTDGFWRTNINSPIPSFFSVVAAHMQHNRK 607
BLAST of mRNA_H-paniculata_contig46.11502.1 vs. uniprot
Match: A0A7S4W3S1_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W3S1_9STRA) HSP 1 Score: 508 bits (1307), Expect = 1.110e-160 Identity = 300/583 (51.46%), Postives = 386/583 (66.21%), Query Frame = 2
Query: 530 KRVKEEPRPRWEVLRMLNYLVIALFVCSITYVVFNYRTMSHADSGNAGLFPILVIWSGCMAYFFGFFGISFLDTNAMARSPSSFGLSHLDHQLYTSRDGPGTNGGFIGAAPGGDGVSQSTMCAKETPSLGLGKSSSSNVSVSAGGRVEGAIQDLPALGPIPEGDEFSSMTDDEVVMCVMSGKLKDHQLEMKLGDHARAVTVRRSLFERRI-----GRSMANLPK-EGMNYERIFGANCEIVCGYVPIPVGVVGPLLLNGDQVFVPMATTEGCLVASTNXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAAAIKEWCEAPENFDMIRDAFQSTTNFGKLKGLKVSVAGRNVYLRFVCFAGDAMGMNMISKGVLAVIDRLQEMFPEMELVAISGNMCTDKKSAAINWIEGRGKSIVCEARIPGKYVESTLKTTVXXXXXXXXXXXLVGSAMAGALGGFNAHASNVVTAVFLATGQDPAQNVESSTCLTLMEQMENGDLLVSVNMPSIEVGTIGGGTSLPGQAACLDIIGCRGATRAPGCPGDNAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRK 2260
K ++ P P+W +L++LNY ++ F+ S+ S + ++ LF L WS + YFFGFFGISF+D + + ++ Q + S + ++ P A+ TP + S + P+L + S +++E+ V++G++KDHQLE KL DH RAV VRR F+ ++ G ++ +LP ++Y R+FGANCEIV GYVP+PVG+VGPL LNG V++PMATTEGCLVASTN + +L+DGITRAPC+RM A AA +K WCE P NF ++ AF+STT FGKL ++ +VAG+NVYLR CFAGDAMGMNM+SKG LAVID L+ +FP + LVA+SGNMCTDKK+AA NWI GRGKS+V EA IP V +TLK XXXXXXXXXXXL+GSAMAGA+GGFNAHA+N VTAVFLATGQDPAQNVESS C+TL+E+ E+GDL + MPSIEVGT+GGGTSLP Q+ACL IGC+G PG DNA+Q+A VVAAAT+AGELSL+AALA+N LV+AHM HNRK
Sbjct: 72 KITRQGPEPKWHILKILNYAAVSSFLVSVGCFA---SDASRHMNDSSSLFKFLFGWSFFLCYFFGFFGISFVDADEI-----------MEGQNFESSERSTSSKSKAVHPP-----------AESTPVCTVPSSF-----------------EKPSLSKT----DLQSKSNEELSNMVLTGQIKDHQLE-KLLDHHRAVDVRRLAFDSKLSSVGCGGALTDLPSGPSLDYSRVFGANCEIVVGYVPLPVGMVGPLTLNGRSVYIPMATTEGCLVASTNRGCKAITQGSGATSVILRDGITRAPCVRMNSAKEAAELKLWCEMPANFATLKHAFESTTGFGKLLSVEPTVAGKNVYLRLQCFAGDAMGMNMVSKGSLAVIDFLKSVFPTLVLVALSGNMCTDKKAAATNWIHGRGKSVVVEAIIPQHVVRTTLKXXXXXXXXXXXXXXLIGSAMAGAIGGFNAHAANNVTAVFLATGQDPAQNVESSNCITLLEETEDGDLWICCTMPSIEVGTVGGGTSLPAQSACLKAIGCKGGGVNPG---DNAKQLAHVVAAATMAGELSLLAALAANTLVQAHMTHNRK 604
BLAST of mRNA_H-paniculata_contig46.11502.1 vs. uniprot
Match: A0A7S2EB74_TRICV (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB74_TRICV) HSP 1 Score: 506 bits (1304), Expect = 1.260e-159 Identity = 297/588 (50.51%), Postives = 372/588 (63.27%), Query Frame = 2
Query: 554 PRWEVLRMLNYLVIALFVCSITYVVFNYRTMSHAD---SGNAGLFPILVIWSGCMAYFFGFFGISFLDTNAMARSPSSFGLSHLDHQLYTSRD-------GPGTNGGFIGAAPGGD-GVSQSTMCAK---ETPSLGLGKSSSSNVSVSAGGRVEGAIQDLPALGPIPEGDEFSSMTDDEVVMCVMSGKLKDHQLEMKLGDHARAVTVRRSLFERRI-----GRSMANLPKE-GMNYERIFGANCEIVCGYVPIPVGVVGPLLLNGDQVFVPMATTEGCLVASTNXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAAAIKEWCEAPENFDMIRDAFQSTTNFGKLKGLKVSVAGRNVYLRFVCFAGDAMGMNMISKGVLAVIDRLQEMFPEMELVAISGNMCTDKKSAAINWIEGRGKSIVCEARIPGKYVESTLKTTVXXXXXXXXXXXLVGSAMAGALGGFNAHASNVVTAVFLATGQDPAQNVESSTCLTLMEQMENGDLLVSVNMPSIEVGTIGGGTSLPGQAACLDIIGCRGATRAPGCPGDNAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNR 2257
P+W VL+ LN + F+ S+ R S A S + L + IWS + YFFGFFGISF+D + + + GPG AP G + + A PS + +S ++ AL P +G M D+E+ V+SG +KDHQLE KL ARAV VRR +FER++ G ++ LP E ++Y R+ GANCEIV GYVP+P GV+GPL L+G+ V+VPMATTEGCLVAS N +A+++DGITRAPC+RM AM AA +K WCE P NF ++ AF+STT+FGKL G +VAGRNVYLR CF+GDAMGMNM+SKG LAVI+ L+ FP +ELVA+SGNMCTDKK+AA NWIEGRGKS+V EA IP V +TLKTTV LVGSAMAGALGGFNAHA+N+VTA+FLATGQDPAQNVESS C+TL+E+ GDL +S MPS+EVGT+GGGT LP QA+CL IGC+G PG DNA+++A+VVAA+ LAGELSL+AALA+N LV+AHM HNR
Sbjct: 99 PKWGVLKALNVVAALAFLFSVI------RFASDASRHMSDSTSLLKFMSIWSALLCYFFGFFGISFVDAEGFSVAGEETKTTEXXXXXXXXXXXXXXXXXGPGKK-----TAPAGSRSIPEKPQHANLHPPAPSAPVCSDPTSRAPITK-----------KALPPNLQG-----MPDNEIAALVLSGVVKDHQLE-KLLSPARAVPVRRIVFERKLSSLNRGGALDELPHEPSLDYGRVHGANCEIVVGYVPLPCGVIGPLTLDGETVYVPMATTEGCLVASANRGCKAISQGGGARSAVIRDGITRAPCVRMRSAMEAAELKLWCEDPANFARLKSAFESTTSFGKLLGAHPTVAGRNVYLRLRCFSGDAMGMNMVSKGSLAVIELLRSTFPSLELVALSGNMCTDKKAAATNWIEGRGKSVVVEATIPKDVVRATLKTTVPAMVNTNLQKNLVGSAMAGALGGFNAHAANIVTAIFLATGQDPAQNVESSNCITLLEETPTGDLWISCTMPSVEVGTVGGGTGLPAQASCLRAIGCKGGGANPG---DNARKLARVVAASVLAGELSLLAALAANTLVQAHMIHNR 655 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46.11502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig46.11502.1 >prot_H-paniculata_contig46.11502.1 ID=prot_H-paniculata_contig46.11502.1|Name=mRNA_H-paniculata_contig46.11502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=641bp MSTFQMPAEQFLEQAFREGARFLISNASVLSGSVLAFVVFAAMTRMFSDSback to top mRNA from alignment at H-paniculata_contig46:4780..17013- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig46.11502.1 ID=mRNA_H-paniculata_contig46.11502.1|Name=mRNA_H-paniculata_contig46.11502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12234bp|location=Sequence derived from alignment at H-paniculata_contig46:4780..17013- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig46:4780..17013- >mRNA_H-paniculata_contig46.11502.1 ID=mRNA_H-paniculata_contig46.11502.1|Name=mRNA_H-paniculata_contig46.11502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3846bp|location=Sequence derived from alignment at H-paniculata_contig46:4780..17013- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |