mRNA_H-paniculata_contig4592.11493.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4592.11493.1 vs. uniprot
Match: D8LJ00_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ00_ECTSI) HSP 1 Score: 130 bits (328), Expect = 1.010e-34 Identity = 63/97 (64.95%), Postives = 77/97 (79.38%), Query Frame = 1
Query: 1 QFVDEKIVNMLLAAYFAFIGAFALAATVDPVIVELFGIK-VGRHGFVANIRVLGEVDLTFTMSELASLMVGSVFAAVYTQTRHWALNNIFGITFCVQ 288
++VD KIVNMLL AYF FIG+FALAATVDPV+V++FG RHG + ++GEVDLTFT +EL S ++G FAA Y +TRHWALNNIFG+TFCVQ
Sbjct: 82 KYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTKFELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ 178
BLAST of mRNA_H-paniculata_contig4592.11493.1 vs. uniprot
Match: A0A7S2V0H1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0H1_9STRA) HSP 1 Score: 102 bits (254), Expect = 7.610e-24 Identity = 47/96 (48.96%), Postives = 70/96 (72.92%), Query Frame = 1
Query: 1 QFVDEKIVNMLLAAYFAFIGAFALAATVDPVIVELFGIKVGRHGFVANIRVLGEVDLTFTMSELASLMVGSVFAAVYTQTRHWALNNIFGITFCVQ 288
+F+D+ +VN+LLA YF+ IG F + +TVDP+I + + ++G + LG +DLTFT SEL SL++G+ FA +Y +T+HWALNN+ GI+FCVQ
Sbjct: 102 KFLDKDLVNLLLAIYFSVIGMFTIGSTVDPIIHKFIKSE-KKYGTAFTLPYLGNIDLTFTPSELVSLILGTAFAGLYFKTKHWALNNLMGISFCVQ 196
BLAST of mRNA_H-paniculata_contig4592.11493.1 vs. uniprot
Match: A0A835Z5W1_9STRA (Putative aspartyl protease family A22B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5W1_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 4.210e-19 Identity = 46/96 (47.92%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 1 QFVDEKIVNMLLAAYFAFIGAFALAATVDPVIVELFGIKVGRHGFVANIRVLGEVDLTFTMSELASLMVGSVFAAVYTQTRHWALNNIFGITFCVQ 288
+ +D+ +VN++L+ YF+ +GA LA T DP +V + +G N+ +GEVDLTFT S L SL G F AVY QT+HW +NNI GI+FCVQ
Sbjct: 98 KLLDKDMVNLVLSVYFSGMGALTLAGTFDP-LVHVVVKSETLYGRKFNLPWVGEVDLTFTPSGLVSLAFGLAFGAVYFQTKHWTMNNILGISFCVQ 192
BLAST of mRNA_H-paniculata_contig4592.11493.1 vs. uniprot
Match: A0A482T1Q9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T1Q9_9ARCH) HSP 1 Score: 84.0 bits (206), Expect = 4.690e-17 Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 1
Query: 1 QFVDEKIVNMLLAAYFAFIGAFALAATVDPVIVELFGIKVGRHGFVANIRVLGEVDLTFTMSELASLMVGSVFAAVYTQTRHWALNNIFGITFCVQ 288
++ D+ VN+LL+ YF+ +G L ++ V F R GF ++GEVD FT +EL SLM+ +F+AVY +T+H+ +NNI GI+FC+Q
Sbjct: 91 KYFDKDTVNLLLSLYFSLVGVLTLTGSLSK-FVSQFLTNPARFGFKQKFPLIGEVDALFTFAELVSLMISIIFSAVYFKTKHFMMNNILGISFCIQ 185
BLAST of mRNA_H-paniculata_contig4592.11493.1 vs. uniprot
Match: A0A7S3HLW3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLW3_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.350e-15 Identity = 34/96 (35.42%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 1 QFVDEKIVNMLLAAYFAFIGAFALAATVDPVIVELFGIKVGRHGFVANIRVLGEVDLTFTMSELASLMVGSVFAAVYTQTRHWALNNIFGITFCVQ 288
++ D+ VN++L+ YF+ +G FAL + + K ++GF ++GE+D+ T +E+ L++ ++F+AVY +T+H+ +NNIFGI FC+Q
Sbjct: 42 KYCDKDTVNLVLSLYFSVVGVFALTGSFSSFASQYITSK-KQYGFKKTFPLVGEIDMLCTPAEIVCLIISTIFSAVYFKTKHYMMNNIFGICFCIQ 136
BLAST of mRNA_H-paniculata_contig4592.11493.1 vs. uniprot
Match: A0A7S0SXT6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXT6_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 4.320e-14 Identity = 34/97 (35.05%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 1 QFVDEKIVNMLLAAYFAFIGAFALAATVDPVIVELFGI-KVGRHGFVANIRVLGEVDLTFTMSELASLMVGSVFAAVYTQTRHWALNNIFGITFCVQ 288
++ ++ IVN++L+ YF+ IG F L T P + K ++GF ++ GE+D T+ E+ S ++ +FA Y +T+H+ LNN+ GI+FC+Q
Sbjct: 93 KYFNKDIVNLILSLYFSVIGVFTLTGTFAPFLSPYIPHDKTKKYGFKTSVVYFGEIDALLTIPEVISFILSIIFAVYYFRTKHYMLNNVLGISFCIQ 189
BLAST of mRNA_H-paniculata_contig4592.11493.1 vs. uniprot
Match: W7T3L6_9STRA (Signal peptide peptidase family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3L6_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 3.650e-13 Identity = 38/96 (39.58%), Postives = 55/96 (57.29%), Query Frame = 1
Query: 1 QFVDEKIVNMLLAAYFAFIGAFALAATVDPVIVELFGIKVGRHGFVANIRVLGEVDLTFTMSELASLMVGSVFAAVYTQTRHWALNNIFGITFCVQ 288
+F D+ VN LLA YF+ IGA L T +P + ++ +LG++DL FT +ELA+ +V A + Q++HW LNN FGI FC+Q
Sbjct: 218 KFFDKDWVNWLLAVYFSIIGAAMLTCTFEPPAAYVLRSSASYGVGPFSLPLLGKMDLRFTQAELAAGVVAVALAGCWFQSKHWMLNNGFGIAFCIQ 313
BLAST of mRNA_H-paniculata_contig4592.11493.1 vs. uniprot
Match: A0A7S2MFE9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MFE9_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.190e-12 Identity = 36/108 (33.33%), Postives = 63/108 (58.33%), Query Frame = 1
Query: 1 QFVDEKIVNMLLAAYFAFIGAFALAATVDPVIVELFGIKVGRHGFVANIRV--------LGEV--DLTFTMS--ELASLMVGSVFAAVYTQTRHWALNNIFGITFCVQ 288
+F D+++VN++++ YF +G AL AT P+ ++ + F I++ GE D +F MS ++ +L+ +VF+ VY +T+HW LNN+ GI+FC+Q
Sbjct: 110 KFFDKEVVNLIISGYFGLVGCAALTATTAPLFEKILPSAITSVRFTKEIKIKHPLPEFIAGESPWDFSFDMSLSDVLALIASAVFSGVYLKTKHWTLNNVLGISFCLQ 217
BLAST of mRNA_H-paniculata_contig4592.11493.1 vs. uniprot
Match: A0A7S2LST7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LST7_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 4.670e-12 Identity = 34/99 (34.34%), Postives = 56/99 (56.57%), Query Frame = 1
Query: 1 QFVDEKIVNMLLAAYFAFIGAFALAATVDPVIVEL---FGIKVGRHGFVANIRVLGEVDLTFTMSELASLMVGSVFAAVYTQTRHWALNNIFGITFCVQ 288
+F D++ VN++++ YF+ +G AL AT+ P + + F K R + G+ F +S++ +LM G F Y QT+HW +NN+ GI FC+Q
Sbjct: 117 KFFDKETVNLIISVYFSLVGVAALTATLGPTLESVGPKFLAKEIRMKHFLPESIGGKSPWVFNVSDIFALMAGVAFNVAYFQTKHWTMNNVLGICFCLQ 215
BLAST of mRNA_H-paniculata_contig4592.11493.1 vs. uniprot
Match: A0A7S1DA29_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DA29_CYCTE) HSP 1 Score: 69.7 bits (169), Expect = 7.630e-12 Identity = 36/103 (34.95%), Postives = 60/103 (58.25%), Query Frame = 1
Query: 1 QFVDEKIVNMLLAAYFAFIGAFALAATVDPVIVEL-FGIKVGRH------GFVANIRVLGEVDLTFTMSELASLMVGSVFAAVYTQTRHWALNNIFGITFCVQ 288
+F+D+++VN+L+ YF +G AL AT+ P++ F K+ R F+ ++ + DLTF SE+ + ++F VY + +HW +NNI GI FC+Q
Sbjct: 112 KFLDKELVNLLIGFYFCMVGCIALYATISPLVPSWGFSWKMDRKITHPLPKFLMESPLVIQFDLTF--SEILVFLASAIFCGVYFRFKHWTMNNILGICFCLQ 212 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4592.11493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4592.11493.1 >prot_H-paniculata_contig4592.11493.1 ID=prot_H-paniculata_contig4592.11493.1|Name=mRNA_H-paniculata_contig4592.11493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp MLLAAYFAFIGAFALAATVDPVIVELFGIKVGRHGFVANIRVLGEVDLTFback to top mRNA from alignment at H-paniculata_contig4592:5855..6785- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4592.11493.1 ID=mRNA_H-paniculata_contig4592.11493.1|Name=mRNA_H-paniculata_contig4592.11493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=931bp|location=Sequence derived from alignment at H-paniculata_contig4592:5855..6785- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4592:5855..6785- >mRNA_H-paniculata_contig4592.11493.1 ID=mRNA_H-paniculata_contig4592.11493.1|Name=mRNA_H-paniculata_contig4592.11493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=534bp|location=Sequence derived from alignment at H-paniculata_contig4592:5855..6785- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |