mRNA_H-paniculata_contig4590.11490.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4590.11490.1
Unique NamemRNA_H-paniculata_contig4590.11490.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4590.11490.1 vs. uniprot
Match: D7FW22_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW22_ECTSI)

HSP 1 Score: 456 bits (1174), Expect = 2.630e-153
Identity = 263/497 (52.92%), Postives = 314/497 (63.18%), Query Frame = 1 
Query:  232 MNETGSGQATLWEFREYFDLPDDRSTTRLFRCFDEDRDNRVGFLELVVGLWSYCCNCNASLMCFAFDLYDTDHNGQISLEEADFMIEDVFGQQWESNDLAKITHDWVHRREDAVFGKPELGIEDWAAFMSVNHLVLAEASRTRLVLQNKVIGVDFWSHCLTKRTTIYSKRRATVEQLLGAHISREVLESLANDRNPMVDHDDATQFTLKVLRRTGPFPRRRKYRDLKGKKLTIKTGA-----------QFKTLLVKEAFERLTVPPGKDALWEEPKSPSALQALMASLTSLQERCPTDRVSAAKNPEGDLQEAEKQMKEQVAKHSKSXXXXARSANASPEALDLLTIRPGRDGTPLGSPVAAAENHEKAGVGDGGGGDDFDDPIIANAFHGLKPMSPEEATPTKKGKRKLQKGSPRRNDMSSPSPTRYGRAGGSPTAAS--------GGKETLTRTGRELVVAGKIRPVGRGGLGDGVGGQGVLSARLLVGAEARRT 1665
            MNETG+G  TLWEFREYF+LPDDRSTTRLFRCFDEDRDNR+GFLELVVG+W+YCCNCNAS++C  FDL D DHNG+I  +E +FMI DVFG +WE ND AK  H W H R+DA+ G PE+ ++ W+AF+S N  + A A  TRLVLQ KV+GV FW+HCL K  TI+  R ATVEQ+L AH+S  +LE LA DR   +DHDD+TQF L+V+RRTGPFPRRRKYRD+ GKKL  K  A           +F TL V+EAFER+TVP GKDA WE+PK PS LQALMASLT++ ER P     A                      SK      + A   P+AL LL  RPG DG PLGSP  A  +   + V          DP IANAF+GLKP+ PE   P          GS R    ++    R  + G SP A+S        GGK TL+RTG+ELV AG++  VG  G   G GG G LSARLL GA   R+
Sbjct:    1 MNETGNGTVTLWEFREYFNLPDDRSTTRLFRCFDEDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHNGKIGADEFNFMIVDVFGPEWEKNDEAKAVHTWFHERDDALLGFPEMDMDAWSAFVSANPQIQAPAVHTRLVLQKKVLGVGFWTHCLPKNMTIFLGRTATVEQILSAHVSPNILEELAQDRRLELDHDDSTQFNLRVIRRTGPFPRRRKYRDMAGKKLRAKAAAAVGAVAADNVKKFATLTVREAFERVTVPAGKDATWEDPKPPSTLQALMASLTAIVERAPPG--GAXXXXXXXXXXXXXXXXXXXXXXSKKRKNNKKGA--PPDALALLKNRPGIDGAPLGSPAVAPSSPTGSAVDA--------DPAIANAFYGLKPL-PEAVAPVSPS---AAAGSGRDRAKTA---ARTAKKGVSPAASSPEGSRAVGGGKITLSRTGKELVGAGEVGCVGVPG---GEGGTGTLSARLLGGANGVRS 475
[Close]
BLAST of mRNA_H-paniculata_contig4590.11490.1 vs. uniprot
Match: A0A4Q3A667_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3A667_9BACT)

HSP 1 Score: 101 bits (252), Expect = 5.000e-20
Identity = 60/206 (29.13%), Postives = 107/206 (51.94%), Query Frame = 1 
Query:  166 PVFETLGLHEWSVSQLWRHFRLMNETGSGQATLWEFREYFDLPDDRSTTRLFRCFDEDRDNRVGFLELVVGLWSYCCNCNASLMCFAFDLYDTDHNGQISLEEADFMIEDVFGQQW-ESNDLAKITHDWVHRREDAVFGKPELGIEDWAAFMSVNHLVLAEASRTRLVLQNKVIGVDFWSHCLTKRTTIYSKRRATVEQLLGAHIS 780
            P F+ L L    V QL+R F  ++   SG   L E   Y ++ +     R+F  FDED   ++ F E V+ LW+YC    A+L  FAFDLYD +++G++S EEA+ ++ D++G  + + N  A+    +V      V  +  L I+ +  F+  +  +L  A + +  L+++V+G  FW     +R  +   +   + +L+  ++S
Sbjct:   18 PEFDALKLRPSEVRQLYRIFARVDVDHSGTVGLKELLNYLEMGEAVFKDRVFSIFDEDGSGQIDFREFVLSLWNYCTLSKATLDLFAFDLYDKNNDGELSAEEAEDLLRDLYGAHYAQHNPTAR----FVAFELKKVCAESSLDIDRFQNFIQYHPSLLFPAFQLQHALRSRVLGSGFWERASERRIELSDGKFVPISRLMELNVS 219
[Close]
BLAST of mRNA_H-paniculata_contig4590.11490.1 vs. uniprot
Match: A0A6A3MZN3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MZN3_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.790e-14
Identity = 65/231 (28.14%), Postives = 105/231 (45.45%), Query Frame = 1 
Query:  181 LGLHEWSVSQLWRHFRLMNETGSGQATLWEFREYFDLPDDRSTTRLFRCFDEDRDNRVGFLELVVGLWSYCCNCNASLMCFAFDLYDTDHNGQISLEEADFMIEDVFGQQWESNDLAKITHDWVHRREDAVFGKPELGIEDWAAFM--SVNH-LVLAEASRTRLVLQNKVIGVDFWSHCLTKRTTIYSKRRATVEQLLGAHISREVLESLANDRNPM--VDHDDATQFTLK 858
            LGL    +  L++ F  M++  SG+  L EF EY DL   R + +                  V+ +W+YC   +ASL+ FA+DLYD D +G+I  +E    + +V+G  WE++  A+   D +    DA+           A F   +V H ++L  A   ++ +Q KV+G  FWS    KR ++       V  L   H+    + S  +  N +  ++ D   Q  LK
Sbjct:   36 LGLDHKHLFALYQIFSAMDKDKSGEINLMEFFEYIDLKRSRFSEKAXXXXXXXXXXXXXXXXFVLAVWNYCSFNHASLVRFAYDLYDIDGSGEIEHDEVVRCVREVWGSAWETSSSAQKIVDKL----DAIMANTPNNRLSAALFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWSRATEKRGSL------NVNALNWDHVKEVTMLSRQSSSNLLTSMEEDIGRQLQLK 256
[Close]
BLAST of mRNA_H-paniculata_contig4590.11490.1 vs. uniprot
Match: A0A7S3M2G6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2G6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.290e-14
Identity = 49/204 (24.02%), Postives = 97/204 (47.55%), Query Frame = 1 
Query:  163 VPVFETLGLHEWSVSQLWRHFRLMNETGSGQATLWEFREYFDLPDDRSTTRLFRCFDEDRDNRVGFLELVVGLWSYCCNCNASLMCFAFDLYDTDHNGQISLEEADFMIEDVFGQQWESNDLAKITHDWVHRREDAVFGKPELGIEDWAAFMSVNHLVLAEASRTRLVLQNKVIGVDFWSHCLTKRTTIYSKRRATVEQLLGAH 774
            + +   + L+   + +L + F  +++   G  ++ +  ++  +   R   RLF   D+DR   V F   +V LW +    + S+    F++YDTD +G+ISL++ D M +D+FG++    ++ K +H  +    D    +  + I+ + AF     + L+     +  LQ   +GV  W +   +   ++  R  TV +LL  H
Sbjct:   18 LEILTAMSLNHNDLKRLKKVFDFIDDEKQGSVSINKVLDFLFVGKTRFNKRLFSTLDKDRTGTVDFYSFIVSLWKFLPLESTSINDLVFEMYDTDADGRISLDQIDKMFKDMFGEKGMEQEVNKNSHVGL---VDKANYEGYVNIKGFQAFCKTRQMFLSPVFNVQKCLQQATLGVSGWENIAKRSIEVHVGRSLTVRELLALH 218
[Close]
BLAST of mRNA_H-paniculata_contig4590.11490.1 vs. uniprot
Match: A0A7S4RTF3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RTF3_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.300e-14
Identity = 50/186 (26.88%), Postives = 91/186 (48.92%), Query Frame = 1 
Query:  169 VFETLGLHEWSVSQLWRHFRLMNETGSGQATLWEFREYFDLPDDRSTTRLFRCFDEDRDNRVGFLELVVGLWSYCCNCNASLMCFAFDLYDTDHNGQISLEEADFMIEDVFGQQWESNDLAK-ITHDWVHRREDAVFGKPELGIEDWAAFMSVNHLVLAEASRTRLVLQNKVIGVDFWSHCLTKRT 723
             F  LG    ++ + W  F  +N++ SG+ T+ EF  YF++       + F  FD    + + FLE +V +W+ C     +L  F FD+YD D +G++S  E + M+++ FG++   + L K    D  H  E+       L +  +  F   + ++L    + + ++Q KV+G+ +W      RT
Sbjct:   53 TFSALGWDRETIEKFWVVFCRINKSLSGEITILEFLNYFNMDRAPYVEKCFSYFDTTGGDDIDFLEFMVSVWNICTLNVETLTNFTFDIYDIDSDGELSFPEIERMVQEFFGKEGIESGLGKECLRDVTHFAEER---GGVLNLTSFTVFTMNHSMLLFPIFQIQRIIQTKVMGLRYWEELERSRT 235
[Close]
BLAST of mRNA_H-paniculata_contig4590.11490.1 vs. uniprot
Match: A0A6A3ZBF7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZBF7_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.550e-14
Identity = 65/231 (28.14%), Postives = 105/231 (45.45%), Query Frame = 1 
Query:  181 LGLHEWSVSQLWRHFRLMNETGSGQATLWEFREYFDLPDDRSTTRLFRCFDEDRDNRVGFLELVVGLWSYCCNCNASLMCFAFDLYDTDHNGQISLEEADFMIEDVFGQQWESNDLAKITHDWVHRREDAVFGKPELGIEDWAAFM--SVNH-LVLAEASRTRLVLQNKVIGVDFWSHCLTKRTTIYSKRRATVEQLLGAHISREVLESLANDRNPM--VDHDDATQFTLK 858
            LGL    +  L++ F  M++  SG+  L EF EY DL   R + +                  V+ +W+YC   +ASL+ FA+DLYD D +G+I  +E    + +V+G  WE++  A+   D +    DA+           A F   +V H ++L  A   ++ +Q KV+G  FWS    KR ++       V  L   H+    + S  +  N +  ++ D   Q  LK
Sbjct:   36 LGLDHKHLFALYQIFSAMDKDKSGEINLMEFFEYIDLKRSRFSEKAXXXXXXXXXXXXXXXXFVLAVWNYCSFNHASLVRFAYDLYDIDGSGEIEHDEVVRCVREVWGSAWETSSSAQKIVDKL----DAIMANTPNNRLSAALFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWSRATEKRGSL------NVNALNWDHVKEVTMLSRQSSSNLLTSMEEDIGRQLQLK 256
[Close]
BLAST of mRNA_H-paniculata_contig4590.11490.1 vs. uniprot
Match: B8BYR6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYR6_THAPS)

HSP 1 Score: 74.7 bits (182), Expect = 1.420e-12
Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 1 
Query:  199 SVSQLWRHFRLMNETGSGQATLWEFREYFDLPDDRSTTRLFRCFDEDRDNRVGFLELVVGLWSYCCNCNASLMCFAFDLYDTDHNGQISLEEADFMIEDVFGQ 507
            ++ + WR F  +N    G   L EF +YFDL     T R F+ FD      + FLE ++ +W+ C     +L  FAFD+YD D +G++S+ E + M++++FG+
Sbjct:    5 TIEKFWRIFCQINVNRDGAIQLDEFLQYFDLEWTPWTERCFKYFDTTGGGDIDFLEFMISVWNVCTFRIDTLSNFAFDMYDLDEDGELSVPEIEKMVKELFGE 107
[Close]
BLAST of mRNA_H-paniculata_contig4590.11490.1 vs. uniprot
Match: K0RU38_THAOC (EF-hand domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RU38_THAOC)

HSP 1 Score: 80.9 bits (198), Expect = 1.510e-12
Identity = 50/177 (28.25%), Postives = 87/177 (49.15%), Query Frame = 1 
Query:  169 VFETLGLHEWSVSQLWRHFRLMNETGSGQATLWEFREYFDLPDDRSTTRLFRCFDEDRDNRVGFLELVVGLWSYCCNCNASLMCFAFDLYDTDHNGQISLEEADFMIEDVFGQQWESNDLAKITHDWVHRREDAVFGKPELGIEDWAAFMSVNHLVLAEASRTRLVLQNKVIGVDFW 699
             F  LG +  +V + WR F  +N + SG   L  F  +F L     T R FR FD      + FLE ++ +W+ C     +L  FAFD+YD D +G++S+ E + M+ +++G       L +   +++ +R  A      L +  + AF + + ++L    + +  LQ +V G  +W
Sbjct:   53 TFSALGFNRKTVEKFWRLFCQVNHS-SGAIQLEHFLAHFRLDWTPWTERCFRYFDTTGGGDIDFLEFMISVWNVCTFKVGTLSNFAFDMYDLDSDGELSIPEVEGMVGELYGHNGGGKCLMEAV-EFLEQRGGA------LKLNSFIAFTASHQMLLFPMFKLQRQLQKRVFGTGYW 221
[Close]
BLAST of mRNA_H-paniculata_contig4590.11490.1 vs. uniprot
Match: G4ZDA4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZDA4_PHYSP)

HSP 1 Score: 76.6 bits (187), Expect = 3.020e-12
Identity = 44/146 (30.14%), Postives = 76/146 (52.05%), Query Frame = 1 
Query:  301 RSTTRLFRCFDEDRDNRVGFLELVVGLWSYCCNCNASLMCFAFDLYDTDHNGQISLEEADFMIEDVFGQQWESNDLAKITHDWVHRREDAVFGKPELGIEDWAAFM--SVNH-LVLAEASRTRLVLQNKVIGVDFWSHCLTKRTTI 729
            R + + F   D +    V F+E V+ +W+YC   +ASL+ FA+DLYD D +G+I  +E    + +++G  WE++  A+     +  + DA+           A F   +V H ++L  A   ++ +Q KV+G  FWS    KR ++
Sbjct:   21 RFSEKAFSVMDRNGSGEVDFIEFVLAVWNYCSFNHASLVRFAYDLYDIDGSGEIEHDEVVRCVREIWGSAWETSSSAQK----IVEKLDAIMANTPNNRLSAALFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWSRATEKRGSL 162
[Close]
BLAST of mRNA_H-paniculata_contig4590.11490.1 vs. uniprot
Match: A0A225WT84_9STRA (EF-hand domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WT84_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.450e-11
Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = 1 
Query:  331 DEDRDNRVGFLELVVGLWSYCCNCNASLMCFAFDLYDTDHNGQISLEEADFMIEDVFGQQWESNDLAKITHDWVHRREDAVFGKP---ELGIEDWAAFMSVNHLVLAEASRTRLVLQNKVIGVDFWSHCLTKRTTI 729
            D +    V F+E V+ +W+YC   +ASL+ FAFDLYD D +G+I  +E +  + +V+G  WE N  A   H  V +  DA+        L    +  F   + ++L  A   ++ +Q KV+G  FW+    KR +I
Sbjct:    2 DRNGSGEVDFIEFVLAVWNYCSFNHASLVRFAFDLYDIDGSGEIEHDEIERCVREVWGAGWEVNSNA---HKIVDKL-DAIMANTTNNRLSATLFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWARATEKRASI 133
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4590.11490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FW22_ECTSI2.630e-15352.92EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A4Q3A667_9BACT5.000e-2029.13Uncharacterized protein (Fragment) n=1 Tax=Verruco... [more]
A0A6A3MZN3_9STRA1.790e-1428.14Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A7S3M2G6_9STRA2.290e-1424.02Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S4RTF3_9STRA2.300e-1426.88Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A6A3ZBF7_9STRA4.550e-1428.14Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
B8BYR6_THAPS1.420e-1234.95Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
K0RU38_THAOC1.510e-1228.25EF-hand domain-containing protein n=1 Tax=Thalassi... [more]
G4ZDA4_PHYSP3.020e-1230.14Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A225WT84_9STRA3.450e-1133.09EF-hand domain-containing protein n=1 Tax=Phytopht... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4590contigH-paniculata_contig4590:8495..12119 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score104.8
Seed ortholog evalue1.4e-19
Seed eggNOG ortholog2880.D7FMZ9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.EF-hand, calcium binding motif
EggNOG OGs2CXXS@1,2S4MR@2759
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-01_003060.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1665
Cds size1665
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4590.11490.1prot_H-paniculata_contig4590.11490.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4590 8495..12119 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930373.2660253-CDS-H-paniculata_contig4590:8494..91151622930373.2660253-CDS-H-paniculata_contig4590:8494..9115Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4590 8495..9115 -
1691481262.872837-CDS-H-paniculata_contig4590:8494..91151691481262.872837-CDS-H-paniculata_contig4590:8494..9115Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4590 8495..9115 -
1622930373.2829149-CDS-H-paniculata_contig4590:9400..95861622930373.2829149-CDS-H-paniculata_contig4590:9400..9586Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4590 9401..9586 -
1691481262.8827038-CDS-H-paniculata_contig4590:9400..95861691481262.8827038-CDS-H-paniculata_contig4590:9400..9586Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4590 9401..9586 -
1622930373.2976289-CDS-H-paniculata_contig4590:10144..103241622930373.2976289-CDS-H-paniculata_contig4590:10144..10324Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4590 10145..10324 -
1691481262.8937411-CDS-H-paniculata_contig4590:10144..103241691481262.8937411-CDS-H-paniculata_contig4590:10144..10324Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4590 10145..10324 -
1622930373.3135433-CDS-H-paniculata_contig4590:10774..110611622930373.3135433-CDS-H-paniculata_contig4590:10774..11061Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4590 10775..11061 -
1691481262.9093046-CDS-H-paniculata_contig4590:10774..110611691481262.9093046-CDS-H-paniculata_contig4590:10774..11061Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4590 10775..11061 -
1622930373.3317175-CDS-H-paniculata_contig4590:11435..115951622930373.3317175-CDS-H-paniculata_contig4590:11435..11595Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4590 11436..11595 -
1691481262.9196038-CDS-H-paniculata_contig4590:11435..115951691481262.9196038-CDS-H-paniculata_contig4590:11435..11595Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4590 11436..11595 -
1622930373.3492293-CDS-H-paniculata_contig4590:11888..121191622930373.3492293-CDS-H-paniculata_contig4590:11888..12119Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4590 11889..12119 -
1691481262.9275095-CDS-H-paniculata_contig4590:11888..121191691481262.9275095-CDS-H-paniculata_contig4590:11888..12119Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4590 11889..12119 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4590.11490.1

>prot_H-paniculata_contig4590.11490.1 ID=prot_H-paniculata_contig4590.11490.1|Name=mRNA_H-paniculata_contig4590.11490.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=555bp
MGATVSLLSNDRRAAMRVAIHEALPVNLYPLEERSFSKGSFYNGDESFAD
HRAHVPVFETLGLHEWSVSQLWRHFRLMNETGSGQATLWEFREYFDLPDD
RSTTRLFRCFDEDRDNRVGFLELVVGLWSYCCNCNASLMCFAFDLYDTDH
NGQISLEEADFMIEDVFGQQWESNDLAKITHDWVHRREDAVFGKPELGIE
DWAAFMSVNHLVLAEASRTRLVLQNKVIGVDFWSHCLTKRTTIYSKRRAT
VEQLLGAHISREVLESLANDRNPMVDHDDATQFTLKVLRRTGPFPRRRKY
RDLKGKKLTIKTGAQFKTLLVKEAFERLTVPPGKDALWEEPKSPSALQAL
MASLTSLQERCPTDRVSAAKNPEGDLQEAEKQMKEQVAKHSKSKSSRARS
ANASPEALDLLTIRPGRDGTPLGSPVAAAENHEKAGVGDGGGGDDFDDPI
IANAFHGLKPMSPEEATPTKKGKRKLQKGSPRRNDMSSPSPTRYGRAGGS
PTAASGGKETLTRTGRELVVAGKIRPVGRGGLGDGVGGQGVLSARLLVGA
EARRT
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mRNA from alignment at H-paniculata_contig4590:8495..12119-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4590.11490.1 ID=mRNA_H-paniculata_contig4590.11490.1|Name=mRNA_H-paniculata_contig4590.11490.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3625bp|location=Sequence derived from alignment at H-paniculata_contig4590:8495..12119- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGAGCCACGGTGAGCCTGCTATCAAACGATCGACGAGCGGCTATGCG
CGTTGCTATCCACGAAGCTCTTCCGGTAAACTTGTATCCTTTGGAAGAGA
GGAGCTTTTCGAAAGGTTCTTTTTATAATGGCGACGAGTCGTTCGCCGAC
CATCGTGCCCATGTGCCAGTCTTCGAGACCCTTGGCCTCCACGAGTGGTC
TGTGTCACAGCTTTGGCGCCACTTTCGCCTGGTGAGCATATGTTGCTGTT
ATCCTGTCTGTATCTGGCCGTGTTCCTGTGACCATCATGCTTGACAAATG
TATTGTGTATACGCAGCAATAGGGTCATCAAGACCACCCATTGGCCTAAA
TGGTAGTCTATCAATCAATTATACAAGGAGCCGTCAAGGACAATTCTTTA
CACCCAGAGCACTGAGCCCAACACTTAGGGCACCACATGTGTGTGTTGAT
GCGTAGCTGCCATGCACGAAGTGACACACTTTAACCACATGTAATGCAAT
AAAGCGTGCCTACACCCGGAACAGATGAACGAAACTGGCAGCGGTCAGGC
GACTCTGTGGGAGTTCCGAGAATATTTTGACCTGCCGGATGACCGGTCTA
CCACTCGCCTTTTTCGGTGTTTCGACGAAGACCGCGACAATCGCGTCGGG
TTCTTGGAGCTTGTCGTGGGGTTGTGGTCATATTGTGAGTACCCACACTC
CTGCACTTCAAATTTGTTTTACAATAGAGCTCCTTCCCAACTGAAAACTA
CACAACTGTGACTCTTAACAGCTCGATTTCAAATTACCCCTTGAGAGCGA
AAAAACCTTTTTGCGCAATATTGCTTCACCTACGTGAACGGCGGAGATTA
TGGAACGCACACTTTCGCGCGACGTGAAATATGTGTCTTATATGCACCGA
AGAGCAAGAAACTAGGGTGGTTGATGTACTAATTGCGAGTATTGTCTTTC
CGCGAAGTTGCCATGTCGATTCAACGTACTCGACTCACTTTCTCAGCTTA
TTGTCTTATGTATCCATGAACCCCCCTGCTTACTATCCACCAACAACAAT
ACGCACAGGCTGCAACTGCAACGCTTCCTTGATGTGCTTTGCCTTCGACC
TGTACGACACCGACCACAACGGCCAGATATCTCTGGAAGAAGCAGATTTT
ATGATCGAGGATGTGTTTGGCCAACAATGGGAGTCCAATGATCTAGCGAA
GATAACTCACGACTGGGTGCACCGACGTGAAGACGCCGTATTCGGGAAAC
CGGAGCTGGGCATTGAAGATTGGGCAGCCTTCATGTCGGTGAATCACCTG
GTCTTGGCGGAAGCTTCCCGGACGCGGCTGGTGCTGCAAAACAAGGTGAT
GAAGTCGGTCATGATCCCTTCCTGACTTTGGACTACATTCGGTCTACATT
ATATTTATTATCAATGTCCTAAAAAATGTACCCGCACCGTAGATGAATAT
CGAAACGTGGGGAGCCTGACTTGTTCACCTCTACACGGGGATTATCACTG
TGGTGGGCTGGGAGAAACAAAACATGTCTGACACGTTGCTAACACCCAAC
GTCAGAACAACAAAACGAGTTCCAGCTGTAGTGTATAAAGATGAGTGTAT
TTTACGCTCAACGCAAAAGCTAACGCAAAAAGACCGACTCTTTTAGATGC
CAACCTGAAAAAACCCAATACATACATCGTGTTTGTTTATTATTGCTCCT
GAACCGGGGCAATTACGCCTGTGTACACCCTTACGTAATCTTCGATCCCT
GACGATTGTGCTTGCTCTGCTACCCCCAATAATAATTGTTCTCAGGTGAT
CGGGGTAGATTTCTGGTCTCACTGCCTTACCAAACGTACCACCATATATT
CCAAACGTCGAGCTACGGTCGAGCAGCTGTTAGGCGCGCATATTTCCCGG
GAAGTTCTAGAATCGCTGGCGAATGACCGAAACCCGATGGTGGACCATGA
CGACGCGACACAGTTTACTCTGAAGGTGGAAAGAAAACGCCATGTGTTTG
ATTTAGGTGTGCTATTCCTTGGCGTATCCTGTCCATCGTACAAGTCCGCT
GAGCAGTAACTGCCTACGAGGGCATTCAAGCAACGAACTTCCCATATATA
GAACTGTTCTGGTGTCAGGTGTCACAAAGGGGGGATATTTCATGGCATAC
TCGACGTGTCAAAATTGTGTCAATCAGAGTAACAGTACACGACGATTTTT
ATCTCTGCGTCTGCTTGCGCGCCTTCAGGAGTCATCCTACGGAAGGGCGG
GTATTCAAGCCGCTTTGTTTAATGAAGAAGACGCTTTGAGAAGGGGATCG
GGCTGTTGTGTTTTGTGTTTTGCATTTTTTGCCCCCCCTTAAATAGAAAT
CCCATTTCAACTCGTCACGACTTTATTGGTTTTGATTCGGGTTATTTTTG
CTTCGCTTTTGTGAAGCGGCCTTCGTTTAACAGTTGACCCCCCACCCCCT
GCCGTAGGATGACTTCCTCTCGTGAAACAAGGCATGACACATTCAATACG
ATGGGTCCGGTCCGCCTGCCGTGGTTGGTCCAGGTTCTGCGGCGGACCGG
ACCGTTCCCGCGGCGAAGGAAATACCGTGATCTGAAGGGCAAAAAACTCA
CGATCAAGACAGGCGCACAGTTCAAGACTTTATTAGTAAAGGAGGCGTTT
GAAAGATTGACTGTGCCTCCGGGGAAAGATGCCTTGTGGGAGGAGCCCAA
ATCACCCTCAGCGCTTCAGGTACTGTCGGCAGCAGTCAGTCGGTGCGTTA
GCGCCGCTCATGTTTAATTATGTATGCACTTCGGTTAGGAAAATACATTA
TTGTCCCATTCCGCATGAGATCAACGATTGTTTTTTTCAAGGTAAATGCA
TGCGCTGCATGTCTAACGGGGAGACGAGTGTAGCACACCTTGGTTCCCCT
TTCCCCGTCTCTCCGCACGCAAACCTACCGATGTAGCTTACTAAATGCCT
CCCCGTGCCTCCCCCCCCCCCGCCTCAACTCGACAAAATTCTCTCTTCCG
TCAGGCTCTGATGGCATCACTTACATCACTCCAAGAACGCTGTCCCACCG
ACCGAGTAAGCGCAGCAAAGAACCCAGAGGGAGATCTTCAGGAAGCCGAA
AAACAAATGAAAGAACAGGTAGCGAAACACTCGAAAAGTAAATCCTCTCG
TGCCCGGTCAGCTAACGCCTCCCCCGAAGCTCTTGATTTGCTCACAATAC
GCCCGGGGCGTGACGGCACACCGCTAGGATCTCCCGTGGCCGCCGCGGAA
AACCACGAAAAGGCAGGAGTGGGCGACGGGGGCGGCGGAGATGACTTCGA
TGATCCGATCATCGCAAACGCCTTCCACGGTTTGAAACCGATGTCACCGG
AGGAAGCGACACCAACCAAGAAGGGAAAACGCAAGTTACAGAAGGGATCG
CCACGTCGAAACGACATGTCGTCGCCGTCGCCAACAAGGTATGGCAGAGC
TGGAGGTTCCCCTACAGCGGCGTCAGGGGGGAAAGAGACGCTCACGAGGA
CGGGGAGGGAGCTGGTCGTCGCGGGCAAGATACGGCCGGTCGGGAGGGGG
GGACTTGGGGATGGCGTGGGCGGGCAAGGGGTGCTCAGCGCGCGCTTGCT
TGTGGGCGCTGAGGCAAGAAGAACG
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Coding sequence (CDS) from alignment at H-paniculata_contig4590:8495..12119-

>mRNA_H-paniculata_contig4590.11490.1 ID=mRNA_H-paniculata_contig4590.11490.1|Name=mRNA_H-paniculata_contig4590.11490.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3330bp|location=Sequence derived from alignment at H-paniculata_contig4590:8495..12119- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGAGCCACGGTGAGCCTGCTATCAAACGATCGACGAGCGGCTATGCG
CGTTGCTATCCACGAAGCTCTTCCGGTAAACTTGTATCCTTTGGAAGAGA
GGAGCTTTTCGAAAGGTTCTTTTTATAATGGCGACGAGTCGTTCGCCGAC
CATCGTGCCCATGTGCCAGTCTTCGAGACCCTTGGCCTCCACGAGTGGTC
TGTGTCACAGCTTTGGCGCCACTTTCGCCTGATGGGAGCCACGGTGAGCC
TGCTATCAAACGATCGACGAGCGGCTATGCGCGTTGCTATCCACGAAGCT
CTTCCGGTAAACTTGTATCCTTTGGAAGAGAGGAGCTTTTCGAAAGGTTC
TTTTTATAATGGCGACGAGTCGTTCGCCGACCATCGTGCCCATGTGCCAG
TCTTCGAGACCCTTGGCCTCCACGAGTGGTCTGTGTCACAGCTTTGGCGC
CACTTTCGCCTGATGAACGAAACTGGCAGCGGTCAGGCGACTCTGTGGGA
GTTCCGAGAATATTTTGACCTGCCGGATGACCGGTCTACCACTCGCCTTT
TTCGGTGTTTCGACGAAGACCGCGACAATCGCGTCGGGTTCTTGGAGCTT
GTCGTGGGGTTGTGGTCATATTATGAACGAAACTGGCAGCGGTCAGGCGA
CTCTGTGGGAGTTCCGAGAATATTTTGACCTGCCGGATGACCGGTCTACC
ACTCGCCTTTTTCGGTGTTTCGACGAAGACCGCGACAATCGCGTCGGGTT
CTTGGAGCTTGTCGTGGGGTTGTGGTCATATTGCTGCAACTGCAACGCTT
CCTTGATGTGCTTTGCCTTCGACCTGTACGACACCGACCACAACGGCCAG
ATATCTCTGGAAGAAGCAGATTTTATGATCGAGGATGTGTTTGGCCAACA
ATGGGAGTCCAATGATCTAGCGAAGATAACTCACGACTGGGTGCACCGAC
GTGAAGACGCCGTATTCGGGAAACCGGAGCTGGGCATTGAAGATTGGGCA
GCCTTCATGTCGGTGAATCACCTGGTCTTGGCGGAAGCTTCCCGGACGCG
GCTGGTGCTGCAAAACAAGGCTGCAACTGCAACGCTTCCTTGATGTGCTT
TGCCTTCGACCTGTACGACACCGACCACAACGGCCAGATATCTCTGGAAG
AAGCAGATTTTATGATCGAGGATGTGTTTGGCCAACAATGGGAGTCCAAT
GATCTAGCGAAGATAACTCACGACTGGGTGCACCGACGTGAAGACGCCGT
ATTCGGGAAACCGGAGCTGGGCATTGAAGATTGGGCAGCCTTCATGTCGG
TGAATCACCTGGTCTTGGCGGAAGCTTCCCGGACGCGGCTGGTGCTGCAA
AACAAGGTGATCGGGGTAGATTTCTGGTCTCACTGCCTTACCAAACGTAC
CACCATATATTCCAAACGTCGAGCTACGGTCGAGCAGCTGTTAGGCGCGC
ATATTTCCCGGGAAGTTCTAGAATCGCTGGCGAATGACCGAAACCCGATG
GTGGACCATGACGACGCGACACAGTTTACTCTGAAGGTGATCGGGGTAGA
TTTCTGGTCTCACTGCCTTACCAAACGTACCACCATATATTCCAAACGTC
GAGCTACGGTCGAGCAGCTGTTAGGCGCGCATATTTCCCGGGAAGTTCTA
GAATCGCTGGCGAATGACCGAAACCCGATGGTGGACCATGACGACGCGAC
ACAGTTTACTCTGAAGGTTCTGCGGCGGACCGGACCGTTCCCGCGGCGAA
GGAAATACCGTGATCTGAAGGGCAAAAAACTCACGATCAAGACAGGCGCA
CAGTTCAAGACTTTATTAGTAAAGGAGGCGTTTGAAAGATTGACTGTGCC
TCCGGGGAAAGATGCCTTGTGGGAGGAGCCCAAATCACCCTCAGCGCTTC
AGGTTCTGCGGCGGACCGGACCGTTCCCGCGGCGAAGGAAATACCGTGAT
CTGAAGGGCAAAAAACTCACGATCAAGACAGGCGCACAGTTCAAGACTTT
ATTAGTAAAGGAGGCGTTTGAAAGATTGACTGTGCCTCCGGGGAAAGATG
CCTTGTGGGAGGAGCCCAAATCACCCTCAGCGCTTCAGGCTCTGATGGCA
TCACTTACATCACTCCAAGAACGCTGTCCCACCGACCGAGTAAGCGCAGC
AAAGAACCCAGAGGGAGATCTTCAGGAAGCCGAAAAACAAATGAAAGAAC
AGGTAGCGAAACACTCGAAAAGTAAATCCTCTCGTGCCCGGTCAGCTAAC
GCCTCCCCCGAAGCTCTTGATTTGCTCACAATACGCCCGGGGCGTGACGG
CACACCGCTAGGATCTCCCGTGGCCGCCGCGGAAAACCACGAAAAGGCAG
GAGTGGGCGACGGGGGCGGCGGAGATGACTTCGATGATCCGATCATCGCA
AACGCCTTCCACGGTTTGAAACCGATGTCACCGGAGGAAGCGACACCAAC
CAAGAAGGGAAAACGCAAGTTACAGAAGGGATCGCCACGTCGAAACGACA
TGTCGTCGCCGTCGCCAACAAGGTATGGCAGAGCTGGAGGTTCCCCTACA
GCGGCGTCAGGGGGGAAAGAGACGCTCACGAGGACGGGGAGGGAGCTGGT
CGTCGCGGGCAAGATACGGCCGGTCGGGAGGGGGGGACTTGGGGATGGCG
TGGGCGGGCAAGGGGTGCTCAGCGCGCGCTTGCTTGTGGGCGCTGAGGCA
AGAAGAACGGCTCTGATGGCATCACTTACATCACTCCAAGAACGCTGTCC
CACCGACCGAGTAAGCGCAGCAAAGAACCCAGAGGGAGATCTTCAGGAAG
CCGAAAAACAAATGAAAGAACAGGTAGCGAAACACTCGAAAAGTAAATCC
TCTCGTGCCCGGTCAGCTAACGCCTCCCCCGAAGCTCTTGATTTGCTCAC
AATACGCCCGGGGCGTGACGGCACACCGCTAGGATCTCCCGTGGCCGCCG
CGGAAAACCACGAAAAGGCAGGAGTGGGCGACGGGGGCGGCGGAGATGAC
TTCGATGATCCGATCATCGCAAACGCCTTCCACGGTTTGAAACCGATGTC
ACCGGAGGAAGCGACACCAACCAAGAAGGGAAAACGCAAGTTACAGAAGG
GATCGCCACGTCGAAACGACATGTCGTCGCCGTCGCCAACAAGGTATGGC
AGAGCTGGAGGTTCCCCTACAGCGGCGTCAGGGGGGAAAGAGACGCTCAC
GAGGACGGGGAGGGAGCTGGTCGTCGCGGGCAAGATACGGCCGGTCGGGA
GGGGGGGACTTGGGGATGGCGTGGGCGGGCAAGGGGTGCTCAGCGCGCGC
TTGCTTGTGGGCGCTGAGGCAAGAAGAACG
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