mRNA_H-paniculata_contig4586.11484.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4586.11484.1 vs. uniprot
Match: D7G8U2_ECTSI (1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8U2_ECTSI) HSP 1 Score: 1132 bits (2929), Expect = 0.000e+0 Identity = 577/665 (86.77%), Postives = 608/665 (91.43%), Query Frame = 1
Query: 1 QAVSKTGGHLGSSLGVIELTVALHYVFDAPEDKITWDVSHQVYPHKILTGRRNRMHTLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKAQLGKRTNNCVAVIGDGAITGGMAFEAMNCAGYLNVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDLDNLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFDVATGKQHKGSSANPSMTSIFANTLIDIATEDRSVVGITAAMPGGTGMDLFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCIYSTFLQRAYDQVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNMVIMAPSDEVELMNMVQTAYKLDTMPSAVRYPRGTGYGLEKLNSLFGYGLTEMPARGEELEIGKGRIVRRPRTTARQKAVILSIGTRLAPALEAAKKLEE-----------------------------------DNPDMGVTVADARFMKPLDADLIRRLASEHDAMLTVEENAIGGFGAHVMHFMVLDGLMDKG-FKMRPMVLPDTFIEAGTQTEQYDQAGLSAGHISASVLRMFDLVPVPTMS 1887
+AVSKTGGHLGSSLGVIELTVALHYVF+APEDKITWDVSHQVYPHKILTGRR+RMH+LRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGK+QL KR NNCVAVIGDGAITGGMAFEAMNCAGYL VRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDL NLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKF+VATGKQHKG+SANPS+TS+FANTLIDIATEDRSVVGITAAMPGGTGMD+FGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCC+YSTF+QRAYDQV+HDVVVQKLPVR ILDRAGLVGNDGPTHHGSFDLTYLGTLP++VIMAPSDE+ELMNM+QTAY +D PS VRYPRGTGYGLEKL SLFGY L EMPA+GEE+EIGKGRIVRRPR TARQKAVILS+GTRLAP+LEAA +LE+ DNPDMGVTVADARFMKPLD DLIRRLA EHDAMLTVEENA+GGFGAHV+HFMVLDGL+D G KMRPMVLPDTFIEAGTQTEQY++AGLSAGHI ASVLR+FD PVPT+S
Sbjct: 123 EAVSKTGGHLGSSLGVIELTVALHYVFEAPEDKITWDVSHQVYPHKILTGRRDRMHSLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDLANLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFNVATGKQHKGTSANPSLTSVFANTLIDIATEDRSVVGITAAMPGGTGMDMFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCVYSTFMQRAYDQVMHDVVVQKLPVRMILDRAGLVGNDGPTHHGSFDLTYLGTLPHIVIMAPSDEIELMNMIQTAYAIDDKPSVVRYPRGTGYGLEKLRSLFGYELDEMPAKGEEVEIGKGRIVRRPRATARQKAVILSLGTRLAPSLEAAIQLEDSFFLVGIGTPECPEGGGGGACGVEGNGGAEQSQAADNPDMGVTVADARFMKPLDVDLIRRLAGEHDAMLTVEENAVGGFGAHVLHFMVLDGLVDDGNLKMRPMVLPDTFIEAGTQTEQYEEAGLSAGHIRASVLRLFDQTPVPTLS 787
BLAST of mRNA_H-paniculata_contig4586.11484.1 vs. uniprot
Match: A0A7S2CRZ0_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CRZ0_9STRA) HSP 1 Score: 932 bits (2408), Expect = 0.000e+0 Identity = 465/629 (73.93%), Postives = 531/629 (84.42%), Query Frame = 1
Query: 4 AVSKTGGHLGSSLGVIELTVALHYVFDAPEDKITWDVSHQVYPHKILTGRRNRMHTLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKAQLGKRTNNCVAVIGDGAITGGMAFEAMNCAGYLNVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDLDNLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFDVATGKQHKGSSAN-PSMTSIFANTLIDIATEDRSVVGITAAMPGGTGMDLFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCIYSTFLQRAYDQVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNMVIMAPSDEVELMNMVQTAYKLDTMPSAVRYPRGTGYGLEKLNSLFGYGLTEMPARGEELEIGKGRIVRRPRTTARQKAVILSIGTRLAPALEAAKKLEEDNPDMGVTVADARFMKPLDADLIRRLASEHDAMLTVEENAIGGFGAHVMHFMVLDGLMDKG-FKMRPMVLPDTFIEAGTQTEQYDQAGLSAGHISASVLRMFDLVPVPTM 1884
AVSKTGGHLGSSLGV+ELTVALHYVFDAPEDKI WDV+HQ YPHKILTGRR+RM TLRQ GLSGF K ESE+D FGAGHSSTSIS+A+G SV K+ LGK NNC+AVIGDGAITGGMA+EAMN A YL R + ILNDNGQVSLPTG SAGG+VP GALS+ T +++SS FK RDV K + L+P +QNVNAKIDEYARG++SGGTLFEELGYYY+GP+DGHDLDNLVPILEN+RD +KPVLLHI+TEKGMGYPPAM ASDK HGVAKFD+ATGKQ KG A PS+TS+FAN LI +AT+DRSVVGITAAMPGGTGMDLFGRRFP RTYDVGIAEQHAVTFAA MA EGLKPFCCIYSTF+QR YDQV+HDVV+Q LPVR ILDRAGLVGNDGPTHHGSFDL Y+G LPN+VIMAPSDE+ELMNM+QTAY +D MPS VRYPRGTGYG+EKLNSLF Y L EMP +G+ +EIGKGRI+R R+ A+ + +LSIGTRL ALEAA LEE +PD+GVTVADARFMKPLD DL+R+LA E+ +LTVEE +IGGFG HV+HF+ DG +D G K+RPMVLPD FIE Q+EQYD AGL+A HI++++ R+ D PT+
Sbjct: 59 AVSKTGGHLGSSLGVVELTVALHYVFDAPEDKIIWDVAHQAYPHKILTGRRDRMPTLRQKDGLSGFTKMCESEYDAFGAGHSSTSISAALGYSVAKSVLGKSKNNCIAVIGDGAITGGMAYEAMNNANYLEARMITILNDNGQVSLPTGQPSAGGIVPVGALSATTSKMLSSSEFKDFRDVLKGISGLMPKEMQNVNAKIDEYARGIVSGGTLFEELGYYYIGPIDGHDLDNLVPILENLRDTPSNKPVLLHIKTEKGMGYPPAMKASDKMHGVAKFDLATGKQMKGKGAKAPSLTSVFANELIKVATDDRSVVGITAAMPGGTGMDLFGRRFPSRTYDVGIAEQHAVTFAAAMAAEGLKPFCCIYSTFMQRGYDQVVHDVVIQGLPVRMILDRAGLVGNDGPTHHGSFDLAYMGCLPNIVIMAPSDELELMNMIQTAYGIDDMPSVVRYPRGTGYGIEKLNSLFNYKLDEMPEKGKAVEIGKGRIIREGRSKAKTQVAVLSIGTRLGQALEAANTLEESDPDLGVTVADARFMKPLDIDLLRKLAKENSVLLTVEEGSIGGFGDHVLHFLAGDGALDNGTLKVRPMVLPDAFIETAAQSEQYDAAGLNAKHIASTMARLLDPEKHPTI 687
BLAST of mRNA_H-paniculata_contig4586.11484.1 vs. uniprot
Match: A0A7S1TWG0_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWG0_9STRA) HSP 1 Score: 912 bits (2356), Expect = 0.000e+0 Identity = 454/629 (72.18%), Postives = 530/629 (84.26%), Query Frame = 1
Query: 1 QAVSKTGGHLGSSLGVIELTVALHYVFDAPEDKITWDVSHQVYPHKILTGRRNRMHTLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKAQLGKRTNNCVAVIGDGAITGGMAFEAMNCAGYLNVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDLDNLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFDVATGKQHKGSSANPSMTSIFANTLIDIATEDRSVVGITAAMPGGTGMDLFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCIYSTFLQRAYDQVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNMVIMAPSDEVELMNMVQTAYKLDTMPSAVRYPRGTGYGLEKLNSLFGYGLTEMPARGEELEIGKGRIVRRPRTTARQKAVILSIGTRLAPALEAAKKLEEDNPDMGVTVADARFMKPLDADLIRRLASEHDAMLTVEENAIGGFGAHVMHFMVLDGLMDKG-FKMRPMVLPDTFIEAGTQTEQYDQAGLSAGHISASVLRMFDLVPVPTM 1884
++VSKTGGHLGS+LGV+ELTVALH VF+APEDKI WDVSHQVYPHKILTGRR RM TLRQ GG+SGFAK ESE+D FGAGHSSTSIS+A+GMS GK Q+ K+ N C+AVIGDGAITGGMA+EAMN AGYLN R +VILNDN QVSLPTGT S GG VP+GALS+ T R+++S+ F+ VRDVAK N+L+P +Q +N KIDEYARG++SGGTLFEELG+YY+GPVDGHD+DNLVPIL++IRD KP+LLH++TEKG GYPPA ASDKYHGV KFDV TGKQ K S PS TS+FAN LI+ A +DR+V+GITAAMPGGTGMD+FGRRFP+RTYDVGIAEQHAVTFAAGMAVEGLKPFCCIYSTFLQR YDQV+HD V+Q LPVR +LDRAGLVGNDGPTHHGSFDL YLG LP +VIMAPSDEVELMNMV T K+D SA+RYPRGTGYGLE LNSLFGYGL EMP RGE L IGKGRIV++ R+K +L++GTRL+ AL AAK+LEE+ M VTVADARFMKPLD DL+R+LASE+D ++TVEE +IGGFG HV+HF+ L+G +D G KMRPMVLPD +IEAGTQ EQYD+AGL++ HI+ +V ++ VP +
Sbjct: 116 ESVSKTGGHLGSALGVVELTVALHAVFNAPEDKICWDVSHQVYPHKILTGRRERMDTLRQYGGISGFAKMKESEYDAFGAGHSSTSISAALGMSEGKRQMRKKQNQCIAVIGDGAITGGMAYEAMNSAGYLNSRMLVILNDNAQVSLPTGTPSVGGTVPSGALSAATSRMLASKPFQDVRDVAKTLNRLMPDRVQEINKKIDEYARGIVSGGTLFEELGFYYIGPVDGHDMDNLVPILQDIRDNDMQKPILLHLKTEKGFGYPPAERASDKYHGVPKFDVPTGKQFKSKSRTPSYTSVFANALIEEAADDRTVMGITAAMPGGTGMDIFGRRFPQRTYDVGIAEQHAVTFAAGMAVEGLKPFCCIYSTFLQRGYDQVMHDCVLQHLPVRLVLDRAGLVGNDGPTHHGSFDLAYLGALPEIVIMAPSDEVELMNMVATQVKIDDKTSAMRYPRGTGYGLETLNSLFGYGLEEMPKRGEVLPIGKGRIVKQGSKQGREKVALLTLGTRLSSALIAAKELEEEG--MSVTVADARFMKPLDIDLVRKLASENDVLVTVEEGSIGGFGDHVLHFLSLEGALDDGKLKMRPMVLPDRYIEAGTQQEQYDEAGLNSQHIAGTVRKLLKKSNVPVL 742
BLAST of mRNA_H-paniculata_contig4586.11484.1 vs. uniprot
Match: A0A8J2SUK2_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUK2_9STRA) HSP 1 Score: 912 bits (2356), Expect = 0.000e+0 Identity = 455/636 (71.54%), Postives = 531/636 (83.49%), Query Frame = 1
Query: 1 QAVSKTGGHLGSSLGVIELTVALHYVFDAPEDKITWDVSHQVYPHKILTGRRNRMHTLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKAQLGKRTNNCVAVIGDGAITGGMAFEAMNCAGYLNVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDLDNLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFDVATGKQHKGSSANP-------SMTSIFANTLIDIATEDRSVVGITAAMPGGTGMDLFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCIYSTFLQRAYDQVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNMVIMAPSDEVELMNMVQTAYKLDTMPSAVRYPRGTGYGLEKLNSLFGYGLTEMPARGEELEIGKGRIVRRPRTTARQKAVILSIGTRLAPALEAAKKLEEDNPDMGVTVADARFMKPLDADLIRRLASEHDAMLTVEENAIGGFGAHVMHFMVLDGLMDKG-FKMRPMVLPDTFIEAGTQTEQYDQAGLSAGHISASVLRMFDLVPVPTM 1884
+AVSKTGGHLGSSLGV+ELTVALH VFDAPED+I WDVSHQ YPHKILTGRR+RM TLRQ GGLSGF KR+ESE+DCFGAGHS+TSIS+A+GMSVGK+Q GK+ NNC+AVIGDGAITGGMAFEAMN A YL R + +LNDNGQVSLPTGT SAGGVVP+GALS+YT RL+SS+ F R VAK + L P IQ +NAKIDEYARG+++GGTLFEELG+YY+GPVDGHDLDNLVPILEN+RD +KPVLLH++TEKG GY PAM ASDK HGVAKFDVATGKQ KG+ A S+TS+FAN L IA DR ++GITAAMPGGTGMD+FGRRFPKRTYDVGIAEQHAVTFAAG+AVEGLKPFCCIYSTF+QR YDQ++HDVV+Q LPVRFILDRAGLVGNDGPTHHGSFDLTYLG +PN+VIMAP++EV+L+NMV TA +D PS VRYPRGTGYGLEKLN LFG L EMP GE L +GKGRI++ R A +K ILS+GTRLA + EAA ++E N D+ VTVADARFMKPLD DL+R+LASE+D ++T+EEN++ GFG +V+HF+ L+G +D G K RPMVLPD+FIE TQ +QYDQAGL+A HI +V ++ D VP +
Sbjct: 95 RAVSKTGGHLGSSLGVVELTVALHKVFDAPEDRILWDVSHQCYPHKILTGRRSRMGTLRQQGGLSGFQKRAESEYDCFGAGHSTTSISAALGMSVGKSQKGKQQNNCIAVIGDGAITGGMAFEAMNNANYLQARMITVLNDNGQVSLPTGTPSAGGVVPSGALSAYTSRLISSKPFADFRQVAKGISSLFPEEIQQINAKIDEYARGIVTGGTLFEELGFYYIGPVDGHDLDNLVPILENLRDTPSNKPVLLHLKTEKGYGYQPAMTASDKMHGVAKFDVATGKQFKGAPAPAGAPPKPSSLTSVFANELCRIAETDRDIIGITAAMPGGTGMDIFGRRFPKRTYDVGIAEQHAVTFAAGLAVEGLKPFCCIYSTFMQRGYDQLVHDVVIQNLPVRFILDRAGLVGNDGPTHHGSFDLTYLGCMPNLVIMAPAEEVDLINMVATAAAIDDKPSVVRYPRGTGYGLEKLNDLFGLNLKEMPEAGEVLPMGKGRIIKEGRAGASKKVAILSLGTRLAASCEAAAEIEGTNDDIAVTVADARFMKPLDIDLVRKLASENDVLITIEENSVLGFGDYVLHFLALEGALDDGKLKFRPMVLPDSFIETATQFQQYDQAGLNAKHIVGTVNKLMDRATVPAV 730
BLAST of mRNA_H-paniculata_contig4586.11484.1 vs. uniprot
Match: A0A7S2XUY7_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUY7_9STRA) HSP 1 Score: 904 bits (2336), Expect = 3.500e-316 Identity = 442/626 (70.61%), Postives = 530/626 (84.66%), Query Frame = 1
Query: 1 QAVSKTGGHLGSSLGVIELTVALHYVFDAPEDKITWDVSHQVYPHKILTGRRNRMHTLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKAQLGKRTNNCVAVIGDGAITGGMAFEAMNCAGYLNVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDLDNLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFDVATGKQHKGSSANPSMTSIFANTLIDIATEDRSVVGITAAMPGGTGMDLFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCIYSTFLQRAYDQVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNMVIMAPSDEVELMNMVQTAYKLDTMPSAVRYPRGTGYGLEKLNSLFGYGLTEMPARGEELEIGKGRIVRRPRTTA--RQKAVILSIGTRLAPALEAAKKLEEDNPDMGVTVADARFMKPLDADLIRRLASEHDAMLTVEENAIGGFGAHVMHFMVLDGLMDKG-FKMRPMVLPDTFIEAGTQTEQYDQAGLSAGHISASVLRMFDLV 1869
+AVSKTGGHL SSLGV+ELTVALH+VFDAPEDKI WDV+HQ Y HKILTGRR++M TLRQSGG+SGF KR+ESE+DCFGAGHSSTSIS+A+G SV K L KR NNC+AVIGDGAITGGMA+EAMN AGYLN R +VILNDNGQVSLPTG SAGG PA ALS+YT RL+ S+ F + R K N L+PS +Q VN +IDEYARG+++GGTLFEELG+YYVGPVDGHDL+NLVPILE IRD++D KPVLLH++TEKG GY PA+AASD+ HGVAKFDVATGKQ+KG + PS T++FAN++ D+ +D+SVVGITAAMPGGTGMD++G+R PK+ +DVGIAEQHAVTFAAGMA EGLKPFC IYSTF+QR YDQV+HDVV+QKLPVR ILDR GLVGNDGPTHHG+FDL Y+GTLPN++IMAPSDEVEL NM+QTAY +D +P+ VR+PRG G GL+KLN LFGY L E P+ GE L +GKGRI++ ++ + + K ILS+GTRLAP++EAA+++E +NPD+ VTVADARFMKPLD DLIR LA H ++T+EE A+GGFG HV+HFM LDGL+D G K+RPMV+PD FIEAGTQ EQYD+AGL+ HI A+V+R+ D V
Sbjct: 90 EAVSKTGGHLSSSLGVVELTVALHHVFDAPEDKIVWDVAHQAYIHKILTGRRDQMGTLRQSGGISGFTKRAESEYDCFGAGHSSTSISAALGFSVAKDMLNKRRNNCIAVIGDGAITGGMAYEAMNNAGYLNQRCLVILNDNGQVSLPTGVPSAGGTQPASALSTYTSRLLVSKPFTNFRQALKQLNTLVPSELQEVNKRIDEYARGVVTGGTLFEELGFYYVGPVDGHDLENLVPILEKIRDQEDSKPVLLHVKTEKGYGYAPALAASDRMHGVAKFDVATGKQNKGGAKVPSYTAVFANSVGDLTEKDKSVVGITAAMPGGTGMDIYGKRHPKQMFDVGIAEQHAVTFAAGMAAEGLKPFCAIYSTFMQRGYDQVVHDVVLQKLPVRMILDRGGLVGNDGPTHHGTFDLAYMGTLPNLIIMAPSDEVELKNMIQTAYDIDYLPTVVRFPRGNGLGLQKLNDLFGYNLEEYPSEGESLPVGKGRIIKEAKSGSEVKDKVAILSLGTRLAPSVEAARQIEAENPDISVTVADARFMKPLDIDLIRELAGNHKVLITIEEGAVGGFGDHVLHFMALDGLLDDGKVKVRPMVIPDAFIEAGTQNEQYDEAGLNTPHIVATVMRLLDRV 715
BLAST of mRNA_H-paniculata_contig4586.11484.1 vs. uniprot
Match: F0YNL7_AURAN (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNL7_AURAN) HSP 1 Score: 898 bits (2321), Expect = 3.840e-315 Identity = 450/639 (70.42%), Postives = 528/639 (82.63%), Query Frame = 1
Query: 1 QAVSKTGGHLGSSLGVIELTVALHYVFDAPEDKITWDVSHQVYPHKILTGRRNRMHTLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKAQLGKRTNNCVAVIGDGAITGGMAFEAMNCAGYLNVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDLDNLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFDVATGKQHKGSSANP-------SMTSIFANTLIDIATEDRSVVGITAAMPGGTGMDLFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCIYSTFLQRAYDQVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNMVIMAPSDEVELMNMVQTAYKLDTMPSAVRYPRGTGYGLEKLNSLFGYGLTEMPARGEELEIGKGRIVR---RPRTTARQKAVILSIGTRLAPALEAAKKLEEDNPDMGVTVADARFMKPLDADLIRRLASEHDAMLTVEENAIGGFGAHVMHFMVLDGLMDKG-FKMRPMVLPDTFIEAGTQTEQYDQAGLSAGHISASVLRMFDLVPVPTM 1884
+AVSKTGGHL SSLGV+ELT ALHYVFDAPED+I WDVSHQ YPHKILTGRR+RM TLRQ GLSGF KR+ESE+D FGAGHSSTSIS+A+GMSVGK+Q G+ NNC+AVIGDGAITGGMAFEAMN A YL R + +LNDNGQVSLPTGT SAGGV+P+GALS+YT RL+SS+ F R VAK + L PS IQ +NAKIDEYARG+++GGTLFEELG+YY+GPVDGHDL+NLVPILEN+RD +KPVLLHI+TEKG GY PAM ASDK HGVAKFDVATGKQ KG+ P S+T+IFAN L +A +DR V+GITAAMPGGTGMD+FGRRFPKRTYDVGIAEQHAVTFAAG+AVEGLKPFCCIYSTF+QR YDQ++HDVV+Q LPVRFILDRAGLVGNDGPTHHGSFDLTYLG +P +VIMAP++EV+L NM+ TAY +D PS VRYPRGTGYGLEKLN LF GLTE+P GE L +GKGRI++ + R A +K ILS+GTRLA A EAAK+LE + D+ VTVADARFMKPLD DL+R+LA E+D ++T+EEN++ GFG +V+HF+ LDG +D G K+RPMVLPD FIE TQ +QY+ AGL+A HI + ++ D VP +
Sbjct: 22 RAVSKTGGHLSSSLGVVELTTALHYVFDAPEDRIMWDVSHQCYPHKILTGRRSRMGTLRQQDGLSGFQKRAESEYDAFGAGHSSTSISAALGMSVGKSQKGRAQNNCIAVIGDGAITGGMAFEAMNNANYLQARMITVLNDNGQVSLPTGTPSAGGVIPSGALSAYTSRLISSKPFADFRQVAKGISSLFPSEIQAINAKIDEYARGIVTGGTLFEELGFYYIGPVDGHDLENLVPILENLRDTPSNKPVLLHIKTEKGYGYAPAMQASDKMHGVAKFDVATGKQFKGAPPAPGAPPKPASLTTIFANELCRLAEKDRDVIGITAAMPGGTGMDIFGRRFPKRTYDVGIAEQHAVTFAAGLAVEGLKPFCCIYSTFMQRGYDQLVHDVVIQDLPVRFILDRAGLVGNDGPTHHGSFDLTYLGCMPGLVIMAPAEEVDLRNMIATAYAIDDKPSCVRYPRGTGYGLEKLNDLFDLGLTEVPEAGEVLPVGKGRIIKDGVKGRPGANKKVAILSLGTRLAAAAEAAKELEGEYDDVAVTVADARFMKPLDIDLVRKLAKENDVLITIEENSVLGFGDYVLHFLALDGALDDGNLKVRPMVLPDAFIETATQFQQYEAAGLNAKHIVGTAAKLLDRAKVPAI 660
BLAST of mRNA_H-paniculata_contig4586.11484.1 vs. uniprot
Match: K8Z520_NANGC (1-deoxy-D-xylulose-5-phosphate synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z520_NANGC) HSP 1 Score: 894 bits (2310), Expect = 1.230e-310 Identity = 449/624 (71.96%), Postives = 529/624 (84.78%), Query Frame = 1
Query: 7 VSKTGGHLGSSLGVIELTVALHYVFDAPEDKITWDVSHQVYPHKILTGRRNRMHTLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKAQLGKRTNNCVAVIGDGAITGGMAFEAMNCAGYLNVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDLDNLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFDVATGKQHKGSS--ANPSMTSIFANTLIDIATEDRSVVGITAAMPGGTGMDLFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCIYSTFLQRAYDQVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNMVIMAPSDEVELMNMVQTAYKLDTMPSAVRYPRGTGYGLEKLNSLFGY-GLTEMPARGEELEIGKGRIVRR----PRTTARQ--KAVILSIGTRLAPALEAAKKLEEDNPDMGVTVADARFMKPLDADLIRRLASEHDAMLTVEENAIGGFGAHVMHFMVLDGLMDKG-FKMRPMVLPDTFIEAGTQTEQYDQAGLSAGHISASV 1848
VSKTGGHLGSSLGVIELTVALHYVF+ P+D+I WDVSHQVYPHKILTGRR+RMH+LRQ+ GLSGFAKRSESE+D FGAGHSSTSIS+A+GMSVGK KR NNCVAVIGDGAITGGMAFEA+N AGYL R +VILNDNGQVSLPTGTHSAGGVVPAGALSSYT RL+SS+ F+ R AK N+L+PS IQ++NAK+DEYARG++ GGTLFEELG+YY+GPVDGHDLDNLVPILEN+RD KPVLLH++TEKG GYPPA ASDKYHGVAKFDV+TG+Q KG + A S+T+ FAN L +IA EDR+VVGITAAMPGGTGMD+FG+RFPKRT+DVGIAEQHAVTFAAGMA+EGLKPFCCIYSTF+QR YDQV+HDVV+QKLPVR ILDRAGLVGNDGPTHHGSFDL+YLG LP++VIMAPSDE+ELMN+++TAY+ + +PS VRYPRG GYGLE L S GY GL E+P RG+ + GKGRI+RR P T A + +LS+GTRL + AAK++EE+ P + VTVADARF+KPLD +++ LA EHD ++TVEEN++GGFG+ V F++ +GL+D G ++R MVLPD FIEAG Q++QYDQAGL+A HI V
Sbjct: 154 VSKTGGHLGSSLGVIELTVALHYVFNTPDDRIVWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISAALGMSVGKLLTNKRVNNCVAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSEIQDINAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLDNLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEVASDKYHGVAKFDVSTGRQFKGGNKGAPLSLTTTFANALCEIAAEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVIHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDELELMNLLETAYETNDLPSVVRYPRGAGYGLETLKSELGYEGLEELPKRGKAVARGKGRIIRRSAVVPSTAAPGTCRVALLSVGTRLLDTVHAAKEIEENLPGVSVTVADARFVKPLDKEMVSSLAMEHDVLITVEENSVGGFGSFVQQFLLNEGLLDGGKLRLRSMVLPDRFIEAGPQSDQYDQAGLAARHIVEKV 777
BLAST of mRNA_H-paniculata_contig4586.11484.1 vs. uniprot
Match: A0A7S1Z117_TRICV (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z117_TRICV) HSP 1 Score: 889 bits (2298), Expect = 2.120e-310 Identity = 452/644 (70.19%), Postives = 519/644 (80.59%), Query Frame = 1
Query: 1 QAVSKTGGHLGSSLGVIELTVALHYVFDAPEDKITWDVSHQVYPHKILTGRRNRMHTLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKAQLGKRTNNCVAVIGDGAITGGMAFEAMNCAGYLNVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDLDNLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFDVATGKQHKGSSANPSMTSIFANTLIDIATEDRSVVGITAAMPGGTGMDLFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCIYSTFLQRAYDQVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNMVIMAPSDEVELMNMVQTAYKLDTMPSAVRYPRGTGYGLEKLNSLFGYGLT--EMPARGEELEIGKGRIVRRP------------RTTARQKAV-ILSIGTRLAPALEAAKKLEEDNPDMGVTVADARFMKPLDADLIRRLASEHDAMLTVEENAIGGFGAHVMHFMVLDGLMDKG-FKMRPMVLPDTFIEAGTQTEQYDQAGLSAGHISASVLRMFDLVPVPTM 1884
+AVSKTGGHL SSLGVIELTVALHYVFD PED I WDVSHQ YPHKILTGRR RM TLRQ GG+SGF KR ES++D FGAGHSSTSIS A GMSV K L KR NNC+AVIGDGAITGGMA+EAMN AGYL R +V+LNDNGQVSLPTGT SAGGV+PA LS+YT L+ S+ F+ RD AK+FNKLLP+ +Q VN +IDEYARG++SGGTLFEELG+YYVGPVDGHD+DN+VPILE +RD +DKPVLLHI+T KGMGYPPA ASD+ HGVAKF++ TG Q KG S+ PS+TSIFAN LID ATEDR++VGITAAMPGGTGMD+FGRRFPKRT+DVGIAEQHAVT AAGMA EGLKPFCCIYSTF+QR YDQV+HDV +Q LPVR ILDRAGLVGNDGPTHHG +DL Y+G +PN+ IMAPSDE+EL NMV T D P+ +RYPRGTGYG EKL LFGY L E+P +GE L IGKGRIVRRP R R+ V ILSIGTRL +L AA ++EE +P++GVTVADARFMKPLD DLIR LA +H AM+ VEE +IGGFG HV+HF+ LDG D G K+RPMV+PD IEAGTQ EQY+QAGL++ HI ++LR+ V VP +
Sbjct: 92 EAVSKTGGHLSSSLGVIELTVALHYVFDMPEDDIIWDVSHQCYPHKILTGRRERMSTLRQMGGISGFCKRKESKYDSFGAGHSSTSISVAQGMSVAKKMLNKRRNNCIAVIGDGAITGGMAYEAMNSAGYLRSRMIVVLNDNGQVSLPTGTQSAGGVIPASQLSAYTSNLLVSKPFQDFRDFAKSFNKLLPTEVQGVNKRIDEYARGIVSGGTLFEELGFYYVGPVDGHDMDNMVPILEKLRDSPNDKPVLLHIKTTKGMGYPPAEKASDRMHGVAKFNLGTGVQVKGKSSAPSLTSIFANALIDQATEDRTIVGITAAMPGGTGMDIFGRRFPKRTFDVGIAEQHAVTMAAGMACEGLKPFCCIYSTFMQRGYDQVMHDVAIQNLPVRMILDRAGLVGNDGPTHHGCYDLAYMGAIPNLTIMAPSDEIELRNMVATCAAFDDGPTVLRYPRGTGYGAEKLTKLFGYELPDGEVPTKGEVLPIGKGRIVRRPGGVGDVNGSASSRGKKREDRVCILSIGTRLHESLVAANEVEEADPELGVTVADARFMKPLDVDLIRELADDHGAMVIVEEGSIGGFGDHVLHFLALDGAFDDGKLKVRPMVIPDVLIEAGTQHEQYEQAGLNSRHIRGTLLRLTKRVKVPVL 735
BLAST of mRNA_H-paniculata_contig4586.11484.1 vs. uniprot
Match: A0A7S3JTC5_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JTC5_9STRA) HSP 1 Score: 885 bits (2287), Expect = 4.080e-309 Identity = 449/648 (69.29%), Postives = 534/648 (82.41%), Query Frame = 1
Query: 7 VSKTGGHLGSSLGVIELTVALHYVFDAPEDKITWDVSHQVYPHKILTGRRNRMHTLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKAQLGKRTNNCVAVIGDGAITGGMAFEAMNCAGYLNVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDLDNLVPILENIRDK-KDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFDVATGKQHK--GSSANPSMTSIFANTLIDIATEDRSVVGITAAMPGGTGMDLFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCIYSTFLQRAYDQVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNMVIMAPSDEVELMNMVQTAYKLDTMPSAVRYPRGTGYGLEKLNSLFGYGL----TEMPARGEELEIGKGRIVRRPR-------TTARQKAVILSIGTRLAPALEAAKKLEEDNPDMGVTVADARFMKPLDADLIRRLASEHDAMLTVEENAIGGFGAHVMHFMVLDGLMDKG-FKMRPMVLPDTFIEAGTQTEQYDQAGLSAGHISASVLRMFDLVPVPTMSPKVPVV 1905
VSKTGGHLGSSLGVIEL+VALHYVFDAPED+I WDVSHQ YPHKILTGRR+RM TLRQ GGLSGF K +ESE+DCFGAGHSSTSIS+A+GMS+GK K NNC+A+IGDGAITGGMA+EAMN A YL+ R + ILNDNGQVSLPTGT SAGGV+P+GALS+YT RL+SS+ F VR+VAK + L+P +Q +NAKIDEYARG+++GGTLFEELG+YYVGPVDGHDL+NL+PIL+N+RD D+KPVLLHI+TEKGMGYPPAM ASDK HGVAKFDV TG+Q K G PS TS+FA+ LI IA +DR VV ITAAMPGGTGMD+FG+RFPKRTYDVGIAEQHAVTFAAG+AVEG+KPFCCIYSTF+QR YDQ++HDVV+QKLPVRFILDRAGLVGNDGPTHHGSFDL+YLG LPN+VIMAP+DE++L NM+ TA+ +D MPS VRYPRGT YG + L LFGY T+ +G+ L IGKGRI+R+ R T R K IL+IGTRLA ALEAAK++E+ NPD+ VTVADARFMKPLD +L++ LA E+D ++T+EEN+I GF ++VM F+ L+GL+D G RPM LPDTFIEA TQ +QYD+AGL+A H+ +V ++ D+ S KVPVV
Sbjct: 75 VSKTGGHLGSSLGVIELSVALHYVFDAPEDRIIWDVSHQCYPHKILTGRRSRMPTLRQQGGLSGFQKMAESEYDCFGAGHSSTSISAALGMSIGKKLKRKSKNNCIAIIGDGAITGGMAYEAMNNANYLDARMITILNDNGQVSLPTGTPSAGGVIPSGALSAYTSRLLSSQPFADVRNVAKGLSNLMPPEMQAINAKIDEYARGIVTGGTLFEELGFYYVGPVDGHDLENLIPILQNLRDSPNDNKPVLLHIKTEKGMGYPPAMRASDKMHGVAKFDVGTGQQFKPSGPKRPPSYTSVFAHELIKIAEDDRDVVSITAAMPGGTGMDIFGKRFPKRTYDVGIAEQHAVTFAAGLAVEGIKPFCCIYSTFMQRGYDQLVHDVVIQKLPVRFILDRAGLVGNDGPTHHGSFDLSYLGCLPNIVIMAPADEIDLKNMIATAHSIDNMPSVVRYPRGTSYGADVLKDLFGYDFGPDDTKYADKGKVLPIGKGRIIRKGRGGIDDGKTNKRNKVAILTIGTRLAAALEAAKEIEQQNPDISVTVADARFMKPLDGNLVKSLAKENDVLITMEENSILGFASYVMQFLSLNGLLDDGNLIFRPMTLPDTFIEAATQHQQYDEAGLNAKHVVGTVSKLLDI------SSKVPVV 716
BLAST of mRNA_H-paniculata_contig4586.11484.1 vs. uniprot
Match: A0A7S0P2U1_9EUKA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P2U1_9EUKA) HSP 1 Score: 885 bits (2286), Expect = 8.000e-309 Identity = 436/627 (69.54%), Postives = 529/627 (84.37%), Query Frame = 1
Query: 4 AVSKTGGHLGSSLGVIELTVALHYVFDAPEDKITWDVSHQVYPHKILTGRRNRMHTLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKAQLGKRTNNCVAVIGDGAITGGMAFEAMNCAGYLNVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDLDNLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFDVATGKQHKGSSANPSMTSIFANTLIDIATEDRSVVGITAAMPGGTGMDLFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCIYSTFLQRAYDQVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNMVIMAPSDEVELMNMVQTAYKLDTMPSAVRYPRGTGYGLEKLNSLFGYGLTEMPARGEELEIGKGRIVRRPRTTARQKAVILSIGTRLAPALEAAKKLEEDNPDMGVTVADARFMKPLDADLIRRLASEHDAMLTVEENAIGGFGAHVMHFMVLDGLMDKG-FKMRPMVLPDTFIEAGTQTEQYDQAGLSAGHISASVLRMFDLVPVPT 1881
AVSKTGGHLGSSLGV+ELTVALHYVFDAP D I WDVSHQVYPHKILTGRR+RMHTLRQ+GGLSGFAKRSESE+D FGAGHS+TSIS+ +GM+V G + N VAVIGDGAITGGMA+EAMN A YLN R +V+ NDNGQVSLPTGT SAGG VPAG+LS+YT RL++S+ F++ RD+AK+ +KL P+ IQ NAKIDEYARG+++GGTLFEELG+YY+GPVDGHDLDNLVPILEN+RD+ ++PVLLHI+TEKG GYPPA AASDKYHGV KF+V++G++ S PS T++F++TLIDIA DRSVV ITAAMPGGTG+D FGRR+PKRT+DVGIAEQHAVTFAAG+AVEG+KPFC IYSTFLQRAYDQV+HD +QKLPVRFILDRAGLVGNDGPTHHGSFDL YLG +PN+VI APSDE+EL NMVQT Y++D MPSA+RYPRG+ G+EKLN LFGY + ++P + E L +GKGR++ + A Q+ ILS+GTRLAP++ AA+ L +P +GVTVADAR+MKP+D +L+ RLA+EHD ++TVEE +IGGFG HV+HF+ L+G +D G K+RPMVLPDT+IEAG+Q EQY++AGLS I A+ L++ VP+
Sbjct: 98 AVSKTGGHLGSSLGVVELTVALHYVFDAPADPIIWDVSHQVYPHKILTGRRSRMHTLRQAGGLSGFAKRSESEYDAFGAGHSTTSISAGLGMAVAHELKGMKRNT-VAVIGDGAITGGMAYEAMNNAAYLNSRVIVVYNDNGQVSLPTGTPSAGGTVPAGSLSAYTSRLIASKDFQNFRDIAKSISKLFPAEIQQANAKIDEYARGLVTGGTLFEELGFYYIGPVDGHDLDNLVPILENVRDRGGNRPVLLHIKTEKGYGYPPAEAASDKYHGVPKFEVSSGRKFTTPSRTPSYTAVFSDTLIDIAATDRSVVAITAAMPGGTGIDKFGRRYPKRTFDVGIAEQHAVTFAAGLAVEGIKPFCAIYSTFLQRAYDQVVHDCAIQKLPVRFILDRAGLVGNDGPTHHGSFDLAYLGCIPNLVICAPSDELELRNMVQTIYEIDHMPSALRYPRGSALGIEKLNDLFGYNMEQLPEKAEALPVGKGRVIMQAHVGAAQRVAILSLGTRLAPSVVAARALTVRDPTIGVTVADARWMKPIDTELVGRLAAEHDVLITVEEGSIGGFGDHVLHFLALNGYLDDGNLKVRPMVLPDTYIEAGSQQEQYEEAGLSHRFIEATALKLLGRSTVPS 723 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4586.11484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4586.11484.1 >prot_H-paniculata_contig4586.11484.1 ID=prot_H-paniculata_contig4586.11484.1|Name=mRNA_H-paniculata_contig4586.11484.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=582bp MHTLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKAQLGKRTback to top mRNA from alignment at H-paniculata_contig4586:652..14843+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4586.11484.1 ID=mRNA_H-paniculata_contig4586.11484.1|Name=mRNA_H-paniculata_contig4586.11484.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14192bp|location=Sequence derived from alignment at H-paniculata_contig4586:652..14843+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4586:652..14843+ >mRNA_H-paniculata_contig4586.11484.1 ID=mRNA_H-paniculata_contig4586.11484.1|Name=mRNA_H-paniculata_contig4586.11484.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3492bp|location=Sequence derived from alignment at H-paniculata_contig4586:652..14843+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |