mRNA_H-paniculata_contig4576.11467.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4576.11467.1
Unique NamemRNA_H-paniculata_contig4576.11467.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4576.11467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4576contigH-paniculata_contig4576:602..12999 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size4349
Cds size2736
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4576.11467.1prot_H-paniculata_contig4576.11467.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4576 1457..11540 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930369.7137089-UTR-H-paniculata_contig4576:601..6861622930369.7137089-UTR-H-paniculata_contig4576:601..686Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4576 602..686 +
1691481261.2836375-UTR-H-paniculata_contig4576:601..6861691481261.2836375-UTR-H-paniculata_contig4576:601..686Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4576 602..686 +
1622930369.7335951-UTR-H-paniculata_contig4576:1387..14561622930369.7335951-UTR-H-paniculata_contig4576:1387..1456Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4576 1388..1456 +
1691481261.293421-UTR-H-paniculata_contig4576:1387..14561691481261.293421-UTR-H-paniculata_contig4576:1387..1456Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4576 1388..1456 +
1622930369.8764052-UTR-H-paniculata_contig4576:11540..129991622930369.8764052-UTR-H-paniculata_contig4576:11540..12999Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4576 11541..12999 +
1691481261.3544085-UTR-H-paniculata_contig4576:11540..129991691481261.3544085-UTR-H-paniculata_contig4576:11540..12999Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4576 11541..12999 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930369.753021-CDS-H-paniculata_contig4576:1456..15191622930369.753021-CDS-H-paniculata_contig4576:1456..1519Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4576 1457..1519 +
1691481261.3027084-CDS-H-paniculata_contig4576:1456..15191691481261.3027084-CDS-H-paniculata_contig4576:1456..1519Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4576 1457..1519 +
1622930369.790694-CDS-H-paniculata_contig4576:6468..66181622930369.790694-CDS-H-paniculata_contig4576:6468..6618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4576 6469..6618 +
1691481261.312484-CDS-H-paniculata_contig4576:6468..66181691481261.312484-CDS-H-paniculata_contig4576:6468..6618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4576 6469..6618 +
1622930369.8119767-CDS-H-paniculata_contig4576:7605..81391622930369.8119767-CDS-H-paniculata_contig4576:7605..8139Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4576 7606..8139 +
1691481261.323177-CDS-H-paniculata_contig4576:7605..81391691481261.323177-CDS-H-paniculata_contig4576:7605..8139Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4576 7606..8139 +
1622930369.8339205-CDS-H-paniculata_contig4576:8719..105271622930369.8339205-CDS-H-paniculata_contig4576:8719..10527Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4576 8720..10527 +
1691481261.3337529-CDS-H-paniculata_contig4576:8719..105271691481261.3337529-CDS-H-paniculata_contig4576:8719..10527Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4576 8720..10527 +
1622930369.8570416-CDS-H-paniculata_contig4576:11359..115401622930369.8570416-CDS-H-paniculata_contig4576:11359..11540Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4576 11360..11540 +
1691481261.3446221-CDS-H-paniculata_contig4576:11359..115401691481261.3446221-CDS-H-paniculata_contig4576:11359..11540Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4576 11360..11540 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4576.11467.1

>prot_H-paniculata_contig4576.11467.1 ID=prot_H-paniculata_contig4576.11467.1|Name=mRNA_H-paniculata_contig4576.11467.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=912bp
MPGSGSNGQLRRAEAEAEEEMEEDLEITLDHHQGIDRDDLQKLVDEKKVE
LDITRDELDSFKQKNEDLKKELEALQEQMDAASDILRDRQVLRVDSAAGI
SKGDEESEDEDGATGPESSHSDESGAVGEANASADSGHYSEDAGAGSEGE
NEGQEIGEKEGGKAPTSESHSQPVTRKKFGKTVHLEDNAADPEVDHEKFL
FEETTNFAQFDANDQEAVWGRQEAIEKGVERVDWHGPSVSDVLEEVKLDP
LETSDAHFRDPMQEIASDNGVREEEEVGLVDNDFKFETSGSAAEKDPLLK
IQNTVAAGDNQEGNPEEQGDGKAKSSSESSSQELLPAENYGDEGEGDEGG
AWKVPQAVLLSLSAEDEDVHPNRKKAKRAFLRGTRRNEEFGNSSTAADKK
KKEEEVGEVFDGDVDVDGNVDADAERGVDVERQPSHGIGEDSNEGVKRLG
RLPAEAEANEMPDGQEPRVEQEERENRQETESKVEPAGISNGSEQSAPDA
AANVTSSKRGESRDGAAVVTVASPNNENEVEVVGQGALDEGKTALTETDV
ELAVAKDEGPPASEGGGEPDEVQAPVVLPVVKMVKEGQEQGTGWDEMTRL
AVEGQQEEAEQLEGEAEEQEHAEQSEHDVIFTDAAGRLQDPGAMPDASEI
ETVPHIEEGAAEQQEHDTFVATNAAPRAAGPQVQSAIPDLDVGVEAIAQA
ASPDAQAPLIGFGASNSEGVVPSLLDDAGAVDSVGVGEVEGEGGGTAGEL
EVLGTERDTTREQQLRIEELEKMAAEAKHEALVAREEVARLMEKVALEAP
TDTSDVDDSDDDGDGDVDDNSEVFDSIFSGRQPDGGAEGEEKREVDGISM
RRHSSAQSPSEDDDLDAVDDEGMYRKAENKIKLLEIVPQEVQDERDEETK
QHLARLAAETR*
back to top

mRNA from alignment at H-paniculata_contig4576:602..12999+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4576.11467.1 ID=mRNA_H-paniculata_contig4576.11467.1|Name=mRNA_H-paniculata_contig4576.11467.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12398bp|location=Sequence derived from alignment at H-paniculata_contig4576:602..12999+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATACACCAGCGGACGTGCCCGGAGGATACGGAGGGTTTCGCGGTGTCGC GTCTTGCCCTATTGGAAAAACAACTGAGTGCTGAGGTAGGTGCAGTTCTT GCTTCGGTTTTGTGCGTGCAGACGCTCCAAGTGTAATGTCTTGCTCGGCT GGCGGAGCAAACAGAAGCAATGTAATTGTACTCGAGCTTTATAATTTATA CGGTCAGCGTCACGTGTGCCATTCTGTACTGTACCGAATGACGGTGTAAA AGGAAAATGCCTCTGTCGCTTGGTCACTTGCACAACCTGGCGAATGGCGT GTTTCGCAGTTTTTTCTATTACTGTAGAGAGAGACAAGGGTCGTATTTCT CATCTGTCTCTGGCGGGTATGTCGCAAATTTTTTCGTATGTCCGTTTCTT ATCCTCCGGAATAATTTGAAATCAATTTGTTGTGCCTTATTTCTAAAAAA TGCCAAGAAGTGAGCGTGGAATCTTTCCAACCAACTTCTCGGTAGCGAGC CGCAGTCGTACCGAGGGCTGAGCTTGAGCAGGAGCGTAGCCCATGTACCA GACCGACTCGTTTAAACATTGGTGCTCTCGTATCCTGGTGCTGCTCCGTA CCTGTCTAACGTTCAGCAGCCGACTCTACGTAATGCATTGCTGAATAGTA CATGCAATTGCTGGTTGTCTCTCTTGTATGAAAACTATACGATAATGATT TAATTCAATATTATGTTACATGATGTGATATATTCAGTGTTGAATGACTG CCGTTGGACTCTTGCTCTAACTAACGCACACTGAAGACCCAATCTCGAAG AGCTGCGGAAAACCACCTGGCTGACTTGAAGGCCAACGGGCTCGCCAAAG CCGGCATGCCCGGGTCTGGATCAAACGGCCAGCTGAGAAGAGCAGAGGCT GAGGCCGAGGAAGAGATGGTGGGTCACGAATGCCTATTCTCTATTGCTAA CCATTAATAATAGTATTACCGTGGTTATGCCCCCGCGCAGCGAGTCGTTT CAACTGTAGGGGGGGGGGCAAATATCCTTCTTCGATGACAGTTGTCTTGA TTTCGGATTTTGTTTTTGGCCATATTAGGTTGGGTTATTGATGTTGGTCA CATGCAAGTTGCTTACTCGATGTCTTGGGGCATGGTGCGATGTTTGCACT CGAGAAATATTTAGGCGCCTAGCTCTAAAGATAGAGCTTGTCATGGTGTT GTCCCTCCCCTTGGTTGAAACGGCTCAGCATTATATTTTTGTCCCTGTAT CGACTTGCTCGAAATTCAGCATTTGTGATGTACGCACAAACGGTCGATGC ATTCGTACTTCGGCACCGTGTCAAATAGGATTCGTTGTCAGAAGTTACTT GAGTACAGGCTTGAGAATATATTCCGAAATTATCATTTCCTCCTTCGAAA TATTAAACATTATTCGTAAACAGGGATTACCTTGATGTCGAAGAGGGTCA GAGAGGGAATTTACTGTATTTCGATTTTCCTTGTAAAGTTGTTGGTCACA TTGACATCAATCAGTCTCCTTTCTCAGATATGTGATGATGCAGAGAGTGA GTGTTCCATGTATATACTCACATAACGTCGGTATCGTGAAATTGCGGTAA CGTGTAAATCATTACCTGGAAAATGATTATTAGTTTATACTTGGAATGGT TCAGACGAAAGTTTGGAAATATTCGTCTCAGTTTCAGCATGTGGAGGATG GCATTATATTAGAAGTAAAAGTCGACCTCCCTCAGGCATGCAGTGGGTGC GTTTCACTCACCCCACAAGTGAAAGAAACATGCTAGATAAAAACGTAATT CTTATGTCAAGTTTTTTCGAGATATATATACATTCTCTTTCTTTCTTTCT TTCATCCCCTGAAAACGCGATTTTACTCGTTTCTCAGATAGATTGAGAGG GAAGAAGCTTAAGCCCACAACACTTTTTACCGTGTTCTGACTCTAGTCCT ACGCAGAACGCGTATTGAATGGTCACATACATATTTTTTTCTGGACAGCT TTACCCCCGAAAAAAACTTTTGTGCAAGTCATCGAGATTTTTTTTCGAGA GAAATTGACCCCTGTTTCCTCCAGACCCCGTCCTCAAACGACCCCAAGTA GGCGAAAGTTTCCCCCCTGCTTTTATCTGTTTTTTCTTTGCGGACGAAAT TCTCAGACCCGTATATATATATGTATATATATATATATATATTGCCGCAT GCATGCGGAGGGTCCCACGAACATAGTGGAAGCCAATCACTACACACAAT GCAACACCACCTGTCGTACCTCACACATGTCTCACACATTTTTTTATTTT TTTTAACCCCCGGAAGGTTAGGCAAAAACCCATGCCGCTGCTTCCACTCT TCGGAAGATTTCTGAGTGTCTGCATTTATGTCTCACACATGACAATAAAT ACTGTCTGTTTCTTACATCTGTCGCACATGACACATAGACGTCAATACAG CCAAACTAGACACACGGGGTCAGGCGGTTGCCGCAGGACTCAGCCTTACA GGAGCACCCAGAGTCCCCATCGCTGAGCGGTGATGGCAACCTTCAGCTGC TGCTGCAAGGCTATCCGATGCTACCACCTTTGTCATGAATGACAATGGTG TTGACAATCTATAATCCATCCGCCCTGCACCTGGAAGCACGCTTCGCGAA GCCAGCTGATTACATATACAGCATGCCTGTGCAGTGTTTGATCTGGAAAA AAAATCTATAGGCTAAAGCCTACCTTCAACAGCAGGGAAGAGCAGTCAGC GTGCGTGGACACCCCGTGGTCGTGGAATATGTATGACACTGGAACGTATA TCTCCCCATGGTATACCATCAAGTTATTTTCGACTGCTATTTTTTCTTCG GGTCTGACTATCATTCTCACACGACGTTTTCTCGCGTGTGGTTGTATCCA GACCTAAGGCCGTCTCCTGTAGAGGCGAAAAGAGTCTCCGTCGAAAAACC TAAATTGCTAGTTTCCGCTGTGCAGAAATATGGTGATGGAAAATGGGTTC CTAGCCTTCGGCCACTTCTTACGGGACTTGGATTCTTTTGTCAAAATCGG ATTTTTCAAAGGAATCCACGTGGAGAATCCAAATTACCACTTCTTATGGG GATTTTTTTTTTTTGATAATTTCTAAAAATAATCCAAGCGGGACTTGTTT TTTCTCCATCTGGCTTGAAATAATTGAAAATAATCCAAGTGCTCTTTTCG GAACTTGGATTATTTTAATCGGAAGAACATGACCCAAGACAAAAAGCGGC ATCTTCTAGGCATGGCTCAAAGCACCAGCGGTATTGTCTGGACCCCCAAA ATACGGCAGCAGCTGTCTGACTGTCCAAGGGTACTGTACTGTGAGGTACA ACAGGCCAATCCCACCGCAGCTCACACACAACATATCCTCGCAGCACACA CACACACCCTACCTATCTGACAAGGCGTGTTTATTTTTGGTTTTCGTTTG AAAGTGGATCCCATTGCAGTTGCAGCTTTGCCCTATCTTCCTGTTTTTTT CGGCGTGCGATGTTAGGGTACGCACATCCGTGTCTACAGGTATAGGCCTC CATTAGGCGGGCTGCATTTTTCGTTCATGAAACTGTTTCGGAAATACGCA GCTCGAAGTTGATATTAAGGGTAAAGACTCTATATTTTTGGCTGTTTCCA GTAACGGCGTCTTTCTGCAACAAATGGATATTGACATCGAAGACTATGGC ATTGTTTTGGAGGTGGTCGCCACACCCACGCTCTTGGACGAGAGGCGTGC CGCATACTGGCGCTCGCGCCGGATTAAAAAAATAAATTGCAGCTACATGG TTCAGCATAACAGCTAACGGGAGCAGAAGGCTGAGCAGCAGATGGGTACT GCCTGGTAAACTTGAGGCACTTGAGAGAAAGCTTTTGGCCGCTGTAAAAC TTGAAGGCTCTCTCCATGACCCATTTTACCATAGAGCCCGGTTCGATAGG CAGTGCGTTTCTGATCGGAGGGCTCAGCAGTCCCTCGTACAACACCCCCC GCTGCTATCGACATCGTGCCCACCGCTGACATTATCACCTATTCAAGTTT TGAACACTTGTTTCCCATAAGAAGTGTTCATTGGATATTTTAATCGGATA TTTGTAAAGTGAATAATTAAAGAATCAAATTTCCAACTTCGAAGAATCCA AGTTCCATAAAAAGTGGCCTTATAGGTGGGGCCTGAAGAAACCTTGTAGG TTCAAAACATTATAATGCCGTTTGATGGAGGTTTGATAGCATTTTGTAAG CGATGTAAGTAGCAAGAGAATTTTCAAATACACCAGGCCTCGTCCGGCAC ACAGCACACCCTCATCCTGTGAAGAGTGGACACCACCATGAATATACCAT CCACCGCAATGCAAATCAAGGCGAACCCATGCGTGGAATGGGTGTGGAAG GAACTGAGGGCTCAAGGGTTCAGTTCGGGTGTGTGCAAGGCACAGCGGAC CATTCTAAAGAAGCGCCCCTGCCTGTACTGAGCAATTGAATGCGCCTGTC CTCTTCATGCATGAGTTCGACAGCCGCCACTACAGGACCAAGCGCCGACG TAATCAACGTCTGCTATTCCTCTAGACTTGCCATAGGGCGGCCGGACTCA CACGTTGGATTATGTGTATGCGAGTGGCATTTGCGACCAGCGTCGGTGTC CTACTGTGTGCTATGAAATATCAATCTTCTCAGAGGAAAGCAGAGTAACA CCTGCGTATCTCATTGAATCGTTTCTGTTGATAAAATGCGAGGGCTATCG AAAAATTGCCAGAGTCTTGTAGCTGGGAGCTTTCCGCCCTCCCAAACCGG TTTTCCTCAGATCGTATTTCGAGTTTTTCGGGATTAAAAGATGAGGAATC GAAAATCTCTAATACAAAAAATTCCAATTTTACGTTTTCGAGTGTGTTTT TTCGGCCCTGTAGGAGATGGCCTAAGGTGACGGCCAAAAAAAAAATCCCT CTCGAGAAAACTCCTGCCATAAGAAGTGCTGCAATTCTTTGTTCCTTTTC TTATAATATTCGCCATATTCGTAGATGGCCCAGGGCACATGATATACACG GGGAACATGTTTATCGTGAATCTTCAGGCGAACGTCTTTTTTGAGTCGTT ATCTAAATCATTGATCTTCGTCATCATCCAGAGGATTAGGGGCAGTACTA TTTTCCAGGTGATGATATCATTTTTCAAGCTTGCCGAAGGCCGCGGTTTG AGTGGCACCACAAGATGAGTTGTGCTACAACGATCTCGTCGAAATATTCC AGATCTTTCAGCAGTCATACAAATATTAGTCTTGACTCTCGAAAAAATAG AGCTTGAAAAAAGTTATCCCCAGGGTGATATTTTCATCTGTAGACTGCGT GAAATGTTGGGATGGAATATGACAGTATCACACGCAGAATGACGCGTACC GCGCTTTCTGGTGTTTGATTGATTGATTGATTGACCTTCTTTTTCACAAA GAAGGCTACCATGACCACCGCCGTTTAGCCAGCTGGTTCATGTATCATCA TCTATTAGTAGATTGATAACAGGTTGTACTTATTGTGGTCCTCCAAATCG ATTCCCTTGGTTCTTACAGGTTAGTTACTATTCGAATTTGGTGGCAATTT TGTAACTGTTGCAGCAAGCAGGCTTCGCTTCACACCACGTACAGGTGCTG CCGGCGTTGTATCTCATGTTCTAATGGCTGCATTATATAACAGATGTTAA TAGCTGAACCAGTGTAATTATTAATGGTTCTTTCGCTGTGGGGTGGTATT GACGAACGTGATCTAAAATGGCATGAGATGTCATGACATGATATGACATC CGTTGTTCGCTGCCTTTTTGCTGTGCCTTTTTGTTTCGTCACTGACGATG ACGATGATGACGAAAAGGAGGAAGATTTAGAGATAACTTTGGACCACCAC CAGGGCATTGACAGGGATGACTTGCAGAAACTCGTCGACGAGAAGAAGGT GGAGCTTGACATCACACGCGACGAGCTCGATTCTTTCAAGCAAAAAAACG AGGACCTGAAGAAAGAGGTGTGCAGTACTTGCTGTCTCTAATTATCTTTA GCTGTCTGCTTCGAAACGTCGTACTGCACCAGGTTATTTATTTGTCATGC CCAACTGTCGTGCTAAGTACTAGTATAATGTAAACATGCCTATATATGGG CAAGGGTTAACGTTTCGATGTTTCAACTATTGTTTTTTTGCCGCGTACTG TACTGCACTGGCCCTACCTGCTGTGTCGGAATAGGTGACGAATTGTTAAG GGTCACAATATTAGGTCCAAGTCATTGGGTGTGATGGGCTGAACGCGTGC CCCCTTGTCTCGAGTCATCGAATAATTATCCCCGCCTACTGCATTGTTTT GTGTGTTGACTTTTGTAAGATGGTTTGATGGCTTGCGCATGATAGCGGCG GTTGCCGTACGCTGTCGAGAAGACCGTCTGATGTTAGAAGATCAATGGGA TTAGCAAGCCTGGGGGAGAAAGGACACGTAATCAAAACAGCCGCACCCAA GCATATCGATCGATCGATCGTACCTGACGTCAACTAATGTCAATGTTGAA TGTTGCAAAGAGATCCGATCTAGGATCGAGAGTGCTGGCTATGATCATGG GCAAACCGTTGAGTTAGTTACGTAGCCAACTAACAAAACCGTCAGGAGCA GTCAGTCAATGGTCACCCAAGTGTCACTCCATGGAAACGCAAGAGATCAA ATCCCCCCACCCTTGTCTCTCTTTCTCGCTCTTGTTCAATAGATACGAGT TGTAAACCCCTGAAAAAGCTACAAGTCGTGTTCCCGCAGGCAAAGAGCGG TTACGTCAAAGCAAAGAAGTCGGAAAATGTTTCTCACGCAACTAGTATAT ACAGTTATGGGCACCTTCACCTCTGGGGACAGTAGTCAATATATTCATCT GTGGGTTTTGGGTCATCCATTTTGCGCTCCTTGTTTTTTTTCAATATATG GTAATCGCTATTGTGCCGTGCCCATCCTCATGACACCAACCGCTGTCCAT ACAGTTGGAGGCCCTCCAAGAGCAGATGGACGCCGCAAGCGATATCCTCC GCGATCGCCAGGTCCTTCGCGTGGACTCCGCCGCCGGCATCAGCAAGGGA GATGAAGAGAGCGAAGACGAAGATGGAGCAACTGGACCCGAATCCAGTCA CAGTGATGAATCCGGTGCGGTCGGAGAAGCAAACGCCAGCGCGGATTCCG GTCATTATTCGGAGGATGCAGGCGCAGGCAGCGAGGGCGAAAATGAGGGG CAGGAAATTGGTGAGAAAGAAGGCGGGAAAGCGCCAACATCAGAAAGCCA CAGCCAGCCGGTGACCCGCAAGAAATTCGGGAAAACCGTCCATCTTGAGG ACAATGCAGCGGATCCGGAGGTTGACCACGAGAAGTTCTTGTTTGAGGAG ACGACAAACTTCGCTCAGTTCGACGCGAACGACCAGGAAGCTGTTTGGGG ACGGCAGGAAGCTATCGAGAAAGGAGTGGAAAGGGTAGATTGGCATGGGC CCAGTGTGTCGGATGTGCTGGAAGAAGTGAAACTTGATGTGGGTGTATTT TATTTCTTTATTTTTTTCCTATTTTTCAACGTTTATGGTGTAAGATGGTT CGGTATTACGTGTTTAGCTTTTATAGTTGGATGTGTCTTTTTTGCACGCC TGAAAACAGTCTATTTTTTTTGTTTTAAGGCTGTTGGTGTCATTGGTGGA TCATTGGTGGATCTGACAAAAGATTACAGGCGAAAAATCAGAGTAGCCGT TTTCTGCCCCAACATCCATCTTATTCATTAATGGGAAATTTGCACGGGCA CGTTCCTGTGACCCCAACACGCGGCGGGGGGAATACGTGTGGTCCTAGCC CACAAAAGTCGACTCAAAAACCTGAATATCCTACAAGAAACACATTATCC ATATAGCGTCTGTTACAGCCCATGGAAGGAACTTTGGCTTGAAGTGTTAC CTGTACCTTGTTTCTGAACTACTGTAGGGATATTCAACTATAGCATGCGT TTCTTGTGTGGGGCAGTATTCTAGTTCGAACAATCAACAGTATCCGCCAA GCTTGCCCAATCACTCAATTGTTCTCTTCGCCTCCCTCTCGACCATCTCT CCACATTTCGACAAGCAGCCGCTGGAGACGAGCGACGCTCATTTCCGCGA TCCTATGCAAGAAATCGCTAGTGACAACGGAGTGCGGGAGGAGGAAGAGG TGGGCCTCGTGGACAACGACTTCAAGTTTGAGACGAGCGGGAGTGCCGCA GAGAAGGACCCTCTTTTAAAAATCCAAAATACCGTTGCGGCAGGAGATAA TCAAGAGGGAAATCCCGAGGAACAAGGAGATGGGAAGGCGAAGTCTAGCT CAGAAAGCTCAAGCCAAGAACTACTGCCGGCGGAGAACTACGGTGATGAG GGAGAGGGCGACGAGGGAGGGGCGTGGAAAGTTCCGCAGGCTGTGTTATT GAGTCTTTCCGCAGAAGATGAAGATGTTCATCCAAACAGAAAGAAGGCCA AACGCGCTTTCCTCAGGGGAACCAGGAGGAACGAGGAATTTGGCAATAGC TCGACCGCTGCTGACAAAAAGAAAAAAGAGGAGGAAGTGGGGGAAGTTTT TGATGGTGATGTTGATGTCGATGGTAATGTAGATGCTGATGCGGAGAGGG GTGTTGACGTGGAGCGGCAGCCTTCGCACGGCATAGGAGAAGATTCGAAC GAGGGCGTGAAACGTTTGGGGAGGTTGCCTGCAGAGGCAGAGGCGAACGA AATGCCAGATGGACAAGAGCCACGGGTGGAACAAGAAGAACGAGAGAATC GTCAAGAAACAGAATCAAAGGTTGAACCCGCTGGCATTTCGAATGGTTCC GAACAGTCTGCCCCGGATGCTGCTGCCAATGTCACCAGTAGCAAGCGTGG CGAGAGTCGAGATGGCGCGGCGGTGGTGACTGTGGCGAGCCCGAACAATG AAAATGAAGTGGAGGTGGTGGGGCAGGGTGCGCTGGACGAGGGGAAGACA GCTCTTACCGAGACCGATGTTGAACTCGCGGTAGCGAAAGATGAAGGTCC ACCCGCTAGTGAGGGCGGCGGCGAGCCAGACGAAGTTCAGGCTCCGGTCG TGTTGCCGGTTGTCAAGATGGTTAAAGAAGGACAAGAACAAGGAACCGGA TGGGATGAGATGACGCGATTGGCGGTTGAAGGACAGCAGGAAGAAGCTGA ACAGCTAGAGGGTGAAGCTGAAGAGCAGGAACACGCTGAGCAGTCAGAGC ATGACGTGATCTTCACAGACGCCGCTGGACGGCTTCAAGACCCCGGTGCA ATGCCTGATGCCTCGGAGATTGAGACTGTACCACATATAGAAGAAGGTGC AGCTGAGCAGCAAGAGCACGACACGTTTGTAGCCACTAATGCTGCGCCAA GGGCTGCGGGACCACAAGTTCAGAGTGCCATACCCGATCTAGACGTTGGG GTGGAGGCTATAGCGCAAGCAGCGTCCCCGGATGCGCAGGCGCCGTTGAT AGGGTTTGGGGCATCAAATTCGGAAGGCGTCGTCCCTTCCTTGTTGGATG ATGCCGGCGCAGTAGACTCGGTCGGAGTGGGTGAGGTGGAGGGGGAGGGA GGGGGCACGGCTGGTGAACTCGAGGTCCTTGGGACAGAGAGGGATACCAC GCGCGAGCAGCAGCTAAGGATCGAGGAGCTCGAGAAGATGGCGGCGGAGG CTAAGCATGAGGCACTGGTGGCTCGGGAAGAAGTGGCGCGCCTGATGGAG AAGGTGGCCTTGGAGGCGCCCACCGACACGTCAGACGTTGACGATAGTGA TGATGATGGTGATGGTGATGTAGATGACAATAGTGAAGTGTTTGACTCCA TATTTAGCGGGCGGCAACCGGACGGCGGTGCCGAAGGCGAGGAAAAAAGA GAAGTCGATGGTATTTCTATGCGGAGGTGAGTACACGTGGTATATTTGGT GATATGGTATTGTTCTGTTACACGGTAACATTGTCATTTTATCATGGCGT CGTGAATTCAGTAGGATGTGGAGGCGCGTATTGATTAGACCAAGTAAAGT TGTGTTGATGCGGAGGGGTCTGTCCTGTAATTCATGGCGAGTTCTAGAGA TTTTACACGAACAAAAGGTTTGTCACGCCCCGCCACTGTATACTTGGAGC GCTCCATTGTGTCAGGTGGCATCACTGATGGATGATGTGTGTTGGCGGTT TTTGATTTCATGTCATGCCATTTTTATAGTTACAATCGTGCGACGACGAG AAGTCGGTCACGTTCATGTTCACTACATTGAAGCACTACATTAGTCGTGA GTTCAAAGCGTTGGCTGGGTTAACTTTGGTACATCCATGAAGAAGATGCG GGGGTCTTTCTAATTTGTAGTTCAAAAGCCTTTGTTGGAATATTGGAAGC CGTGTCTTCGGGTCAGCAGTGAGTCATTGACTGATCTCTGTTGCGCGGGA CTTCGGGCATCTGTGTTGAATATTTTCGCCATTTTACATTGGCGAAGGAG GGCACGGTAAAGAACAAACATTTTTATGAAGATTCGCCCTCAACAAAATT GGATACTTGCTACGGGGATACATTTGAATCAAGTGTTTATAAGTGATATT CAAATTAAAAATTCATCAACCATAGACATGTGGACATGGATGAACGTATT CAGTCAAGGTTTGAACCATTTTGCCGTGCGTGCTCTAATCCGACTAACCG CAACCCTTGCCTCGTTTGCTACCGACGGCCGTATCTTTTCTTGTTATTGG TCTTTCAGACACTCGTCCGCACAAAGTCCTTCTGAAGACGACGACCTGGA CGCCGTTGACGACGAGGGCATGTACAGGAAGGCTGAGAACAAGATCAAAC TCCTGGAAATTGTTCCGCAAGAAGTGCAGGATGAGCGAGATGAAGAAACC AAGCAGCACTTGGCTAGGCTGGCGGCGGAGACACGTTAGGTAGTGAATTG ATACGTGCGAAAGTAGAGGTGGTGTTGTTATTTGGTGACAAAATCAACCA CCTTTGTTGCATATCCTTGCCCTCTGTCTACGAATTTTCCTTATTTTATG GCATTATTTACGTTTCCTAGTGGCATTTAAAACCGAGGTTTAATTTCGGC TATTATCGAAAGAGGAGAAACAGGCAAATCTCTATGAGCCATGGTCGGTG ATGTTTTTTTTGTGATAATGGTGATTGATAGGCGTACTGCGCAGGGGTCC CTTACACACGACGATGTTGCGATTTGCCTTGGTTCCCCCTAGATATTTTC GGCCTGGGATTTTCGAGTGTAAACGCTGGTCAAGCAGTCTAGTGGTTATC GATAGTGCTGTCGACCGTGTGGTTTATCATGATCAATTGATGATTTCATT TGCGGTGTATACTTGTGTATCTTGACTCGCGAAACCTTGGCGATTGCACT GTACCATAGCTTGCCAGTGCACACTAGCTGACATGAGCATGGCAGTTGCT TCTGGCATGTATGTTCCTGTAGGCCACGTTTGTATTTCTCAACTGTGCTT GATCCTTGGGTGTTTTGACGTAATGACACACACTTGAGTGGGTCTAGTTC GTGGTGAGTGGTGTGTCACCAGTTGAATTTTGTGCTCTCATGTTGGGGTG CTGCGTCACTATTTGGGCACCTCGTTGAACGTTTGTCTTTGTGCCTTGTA TAAGAGTCAAACATTGCTGTTCAGTGCGCACCGGCAAAGTCTGCGCTGCG TGGGGTGTATGTCTCGTGTTTGGTTATGTCAGTGTCTTTGTTGGATGACC CCCGTTTTGTACCACCATGTTTGAACAGATTAGATCTTCGGAGATCTGAA AAAGTCCGATTTGCCTAATGTTGCACAATTTGTCTAAAAATTGGCACTTT ACACGTTTGGGCTTTTATAACCAAGGACTTTTGTTCCGAAATTTCGTTTA TTTTAGAGGGGGAAAAGTGAGGAGTTACGATCGGCAAACACTTTTGATTC GCTTGGAGAAGCTGTCCTCGTCTGATCAGCTTTTCTTGTTGTGCAAAGTG ATGGTACATGGGATGCTTGTAATTAGAGTACGTAATTTACGATGGATCTG CGTAGAAGACACAGCAGAGCGTATTTTGGCGGTTTTTGCTCTGCTTTGGT TGTCGGCCTTTAGATCATGCCTTTACTTTTCAGTACGAACGATGCAATTG GTGCGCTCTGACCTCTGTCACGATGCCGCTTTGCCTGTGGATGTTGAAAT GCCGGAGGATGTAGAAAAAAGGGCAAAATGTGTCTCTTTGATTATAATAA GTGTAAGGTGTAAGGAGCTGGTGTGTGTTTTTTAGAAGTTACCTCACTAC TGGCTTTGAGTAATTTGTTCAGAAACGACGAACTTCCTGTATTGACGGAT AATGATGAGCTCATCGTTTGGAGCTATTGTACGTATTCTCTCGTTGCC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig4576:602..12999+

>mRNA_H-paniculata_contig4576.11467.1 ID=mRNA_H-paniculata_contig4576.11467.1|Name=mRNA_H-paniculata_contig4576.11467.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5472bp|location=Sequence derived from alignment at H-paniculata_contig4576:602..12999+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCGGGTCTGGATCAAACGGCCAGCTGAGAAGAGCAGAGGCTGAGGC
CGAGGAAGAGATGATGCCCGGGTCTGGATCAAACGGCCAGCTGAGAAGAG
CAGAGGCTGAGGCCGAGGAAGAGATGGAGGAAGATTTAGAGATAACTTTG
GACCACCACCAGGGCATTGACAGGGATGACTTGCAGAAACTCGTCGACGA
GAAGAAGGTGGAGCTTGACATCACACGCGACGAGCTCGATTCTTTCAAGC
AAAAAAACGAGGACCTGAAGAAAGAGGAGGAAGATTTAGAGATAACTTTG
GACCACCACCAGGGCATTGACAGGGATGACTTGCAGAAACTCGTCGACGA
GAAGAAGGTGGAGCTTGACATCACACGCGACGAGCTCGATTCTTTCAAGC
AAAAAAACGAGGACCTGAAGAAAGAGTTGGAGGCCCTCCAAGAGCAGATG
GACGCCGCAAGCGATATCCTCCGCGATCGCCAGGTCCTTCGCGTGGACTC
CGCCGCCGGCATCAGCAAGGGAGATGAAGAGAGCGAAGACGAAGATGGAG
CAACTGGACCCGAATCCAGTCACAGTGATGAATCCGGTGCGGTCGGAGAA
GCAAACGCCAGCGCGGATTCCGGTCATTATTCGGAGGATGCAGGCGCAGG
CAGCGAGGGCGAAAATGAGGGGCAGGAAATTGGTGAGAAAGAAGGCGGGA
AAGCGCCAACATCAGAAAGCCACAGCCAGCCGGTGACCCGCAAGAAATTC
GGGAAAACCGTCCATCTTGAGGACAATGCAGCGGATCCGGAGGTTGACCA
CGAGAAGTTCTTGTTTGAGGAGACGACAAACTTCGCTCAGTTCGACGCGA
ACGACCAGGAAGCTGTTTGGGGACGGCAGGAAGCTATCGAGAAAGGAGTG
GAAAGGGTAGATTGGCATGGGCCCAGTGTGTCGGATGTGCTGGAAGAAGT
GAAACTTGATTTGGAGGCCCTCCAAGAGCAGATGGACGCCGCAAGCGATA
TCCTCCGCGATCGCCAGGTCCTTCGCGTGGACTCCGCCGCCGGCATCAGC
AAGGGAGATGAAGAGAGCGAAGACGAAGATGGAGCAACTGGACCCGAATC
CAGTCACAGTGATGAATCCGGTGCGGTCGGAGAAGCAAACGCCAGCGCGG
ATTCCGGTCATTATTCGGAGGATGCAGGCGCAGGCAGCGAGGGCGAAAAT
GAGGGGCAGGAAATTGGTGAGAAAGAAGGCGGGAAAGCGCCAACATCAGA
AAGCCACAGCCAGCCGGTGACCCGCAAGAAATTCGGGAAAACCGTCCATC
TTGAGGACAATGCAGCGGATCCGGAGGTTGACCACGAGAAGTTCTTGTTT
GAGGAGACGACAAACTTCGCTCAGTTCGACGCGAACGACCAGGAAGCTGT
TTGGGGACGGCAGGAAGCTATCGAGAAAGGAGTGGAAAGGGTAGATTGGC
ATGGGCCCAGTGTGTCGGATGTGCTGGAAGAAGTGAAACTTGATCCGCTG
GAGACGAGCGACGCTCATTTCCGCGATCCTATGCAAGAAATCGCTAGTGA
CAACGGAGTGCGGGAGGAGGAAGAGGTGGGCCTCGTGGACAACGACTTCA
AGTTTGAGACGAGCGGGAGTGCCGCAGAGAAGGACCCTCTTTTAAAAATC
CAAAATACCGTTGCGGCAGGAGATAATCAAGAGGGAAATCCCGAGGAACA
AGGAGATGGGAAGGCGAAGTCTAGCTCAGAAAGCTCAAGCCAAGAACTAC
TGCCGGCGGAGAACTACGGTGATGAGGGAGAGGGCGACGAGGGAGGGGCG
TGGAAAGTTCCGCAGGCTGTGTTATTGAGTCTTTCCGCAGAAGATGAAGA
TGTTCATCCAAACAGAAAGAAGGCCAAACGCGCTTTCCTCAGGGGAACCA
GGAGGAACGAGGAATTTGGCAATAGCTCGACCGCTGCTGACAAAAAGAAA
AAAGAGGAGGAAGTGGGGGAAGTTTTTGATGGTGATGTTGATGTCGATGG
TAATGTAGATGCTGATGCGGAGAGGGGTGTTGACGTGGAGCGGCAGCCTT
CGCACGGCATAGGAGAAGATTCGAACGAGGGCGTGAAACGTTTGGGGAGG
TTGCCTGCAGAGGCAGAGGCGAACGAAATGCCAGATGGACAAGAGCCACG
GGTGGAACAAGAAGAACGAGAGAATCGTCAAGAAACAGAATCAAAGGTTG
AACCCGCTGGCATTTCGAATGGTTCCGAACAGTCTGCCCCGGATGCTGCT
GCCAATGTCACCAGTAGCAAGCGTGGCGAGAGTCGAGATGGCGCGGCGGT
GGTGACTGTGGCGAGCCCGAACAATGAAAATGAAGTGGAGGTGGTGGGGC
AGGGTGCGCTGGACGAGGGGAAGACAGCTCTTACCGAGACCGATGTTGAA
CTCGCGGTAGCGAAAGATGAAGGTCCACCCGCTAGTGAGGGCGGCGGCGA
GCCAGACGAAGTTCAGGCTCCGGTCGTGTTGCCGGTTGTCAAGATGGTTA
AAGAAGGACAAGAACAAGGAACCGGATGGGATGAGATGACGCGATTGGCG
GTTGAAGGACAGCAGGAAGAAGCTGAACAGCTAGAGGGTGAAGCTGAAGA
GCAGGAACACGCTGAGCAGTCAGAGCATGACGTGATCTTCACAGACGCCG
CTGGACGGCTTCAAGACCCCGGTGCAATGCCTGATGCCTCGGAGATTGAG
ACTGTACCACATATAGAAGAAGGTGCAGCTGAGCAGCAAGAGCACGACAC
GTTTGTAGCCACTAATGCTGCGCCAAGGGCTGCGGGACCACAAGTTCAGA
GTGCCATACCCGATCTAGACGTTGGGGTGGAGGCTATAGCGCAAGCAGCG
TCCCCGGATGCGCAGGCGCCGTTGATAGGGTTTGGGGCATCAAATTCGGA
AGGCGTCGTCCCTTCCTTGTTGGATGATGCCGGCGCAGTAGACTCGGTCG
GAGTGGGTGAGGTGGAGGGGGAGGGAGGGGGCACGGCTGGTGAACTCGAG
GTCCTTGGGACAGAGAGGGATACCACGCGCGAGCAGCAGCTAAGGATCGA
GGAGCTCGAGAAGATGGCGGCGGAGGCTAAGCATGAGGCACTGGTGGCTC
GGGAAGAAGTGGCGCGCCTGATGGAGAAGGTGGCCTTGGAGGCGCCCACC
GACACGTCAGACGTTGACGATAGTGATGATGATGGTGATGGTGATGTAGA
TGACAATAGTGAAGTGTTTGACTCCATATTTAGCGGGCGGCAACCGGACG
GCGGTGCCGAAGGCGAGGAAAAAAGAGAAGTCGATGGTATTTCTATGCGG
AGCCGCTGGAGACGAGCGACGCTCATTTCCGCGATCCTATGCAAGAAATC
GCTAGTGACAACGGAGTGCGGGAGGAGGAAGAGGTGGGCCTCGTGGACAA
CGACTTCAAGTTTGAGACGAGCGGGAGTGCCGCAGAGAAGGACCCTCTTT
TAAAAATCCAAAATACCGTTGCGGCAGGAGATAATCAAGAGGGAAATCCC
GAGGAACAAGGAGATGGGAAGGCGAAGTCTAGCTCAGAAAGCTCAAGCCA
AGAACTACTGCCGGCGGAGAACTACGGTGATGAGGGAGAGGGCGACGAGG
GAGGGGCGTGGAAAGTTCCGCAGGCTGTGTTATTGAGTCTTTCCGCAGAA
GATGAAGATGTTCATCCAAACAGAAAGAAGGCCAAACGCGCTTTCCTCAG
GGGAACCAGGAGGAACGAGGAATTTGGCAATAGCTCGACCGCTGCTGACA
AAAAGAAAAAAGAGGAGGAAGTGGGGGAAGTTTTTGATGGTGATGTTGAT
GTCGATGGTAATGTAGATGCTGATGCGGAGAGGGGTGTTGACGTGGAGCG
GCAGCCTTCGCACGGCATAGGAGAAGATTCGAACGAGGGCGTGAAACGTT
TGGGGAGGTTGCCTGCAGAGGCAGAGGCGAACGAAATGCCAGATGGACAA
GAGCCACGGGTGGAACAAGAAGAACGAGAGAATCGTCAAGAAACAGAATC
AAAGGTTGAACCCGCTGGCATTTCGAATGGTTCCGAACAGTCTGCCCCGG
ATGCTGCTGCCAATGTCACCAGTAGCAAGCGTGGCGAGAGTCGAGATGGC
GCGGCGGTGGTGACTGTGGCGAGCCCGAACAATGAAAATGAAGTGGAGGT
GGTGGGGCAGGGTGCGCTGGACGAGGGGAAGACAGCTCTTACCGAGACCG
ATGTTGAACTCGCGGTAGCGAAAGATGAAGGTCCACCCGCTAGTGAGGGC
GGCGGCGAGCCAGACGAAGTTCAGGCTCCGGTCGTGTTGCCGGTTGTCAA
GATGGTTAAAGAAGGACAAGAACAAGGAACCGGATGGGATGAGATGACGC
GATTGGCGGTTGAAGGACAGCAGGAAGAAGCTGAACAGCTAGAGGGTGAA
GCTGAAGAGCAGGAACACGCTGAGCAGTCAGAGCATGACGTGATCTTCAC
AGACGCCGCTGGACGGCTTCAAGACCCCGGTGCAATGCCTGATGCCTCGG
AGATTGAGACTGTACCACATATAGAAGAAGGTGCAGCTGAGCAGCAAGAG
CACGACACGTTTGTAGCCACTAATGCTGCGCCAAGGGCTGCGGGACCACA
AGTTCAGAGTGCCATACCCGATCTAGACGTTGGGGTGGAGGCTATAGCGC
AAGCAGCGTCCCCGGATGCGCAGGCGCCGTTGATAGGGTTTGGGGCATCA
AATTCGGAAGGCGTCGTCCCTTCCTTGTTGGATGATGCCGGCGCAGTAGA
CTCGGTCGGAGTGGGTGAGGTGGAGGGGGAGGGAGGGGGCACGGCTGGTG
AACTCGAGGTCCTTGGGACAGAGAGGGATACCACGCGCGAGCAGCAGCTA
AGGATCGAGGAGCTCGAGAAGATGGCGGCGGAGGCTAAGCATGAGGCACT
GGTGGCTCGGGAAGAAGTGGCGCGCCTGATGGAGAAGGTGGCCTTGGAGG
CGCCCACCGACACGTCAGACGTTGACGATAGTGATGATGATGGTGATGGT
GATGTAGATGACAATAGTGAAGTGTTTGACTCCATATTTAGCGGGCGGCA
ACCGGACGGCGGTGCCGAAGGCGAGGAAAAAAGAGAAGTCGATGGTATTT
CTATGCGGAGACACTCGTCCGCACAAAGTCCTTCTGAAGACGACGACCTG
GACGCCGTTGACGACGAGGGCATGTACAGGAAGGCTGAGAACAAGATCAA
ACTCCTGGAAATTGTTCCGCAAGAAGTGCAGGATGAGCGAGATGAAGAAA
CCAAGCAGCACTTGGCTAGGCTGGCGGCGGAGACACGTTAGACACTCGTC
CGCACAAAGTCCTTCTGAAGACGACGACCTGGACGCCGTTGACGACGAGG
GCATGTACAGGAAGGCTGAGAACAAGATCAAACTCCTGGAAATTGTTCCG
CAAGAAGTGCAGGATGAGCGAGATGAAGAAACCAAGCAGCACTTGGCTAG
GCTGGCGGCGGAGACACGTTAG
back to top