mRNA_H-paniculata_contig45706.11455.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig45706.11455.1 vs. uniprot
Match: D8LES8_ECTSI (Similar to sirtuin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES8_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 2.550e-13 Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 1 VMRQEVPQCPVCRRGVMKPDITFFGEKLPNAVKRAVEADHKKA 129
VM+Q VP+CP C+ GV+KPDITFFGE+LP +VKRAVEADHKKA
Sbjct: 185 VMQQRVPRCPSCQ-GVVKPDITFFGERLPASVKRAVEADHKKA 226
BLAST of mRNA_H-paniculata_contig45706.11455.1 vs. uniprot
Match: A0A7S1GBY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBY8_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 2.570e-7 Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = 1
Query: 1 VMRQEVPQCPVCRRGVMKPDITFFGEKLPNAVKRAVEAD 117
VM EVP+CP+CR GV+KPDI FFGE LP + VE D
Sbjct: 222 VMAGEVPRCPICRVGVVKPDIVFFGEALPLKFGQLVEGD 260
BLAST of mRNA_H-paniculata_contig45706.11455.1 vs. uniprot
Match: A0A177WFL8_BATDL (Deacetylase sirtuin-type domain-containing protein n=3 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WFL8_BATDL) HSP 1 Score: 52.8 bits (125), Expect = 9.980e-7 Identity = 24/46 (52.17%), Postives = 28/46 (60.87%), Query Frame = 1
Query: 1 VMRQEVPQCPVCRR---GVMKPDITFFGEKLPNAVKRAVEADHKKA 129
+ Q VP CP C G+MKPDI FFGEKLP+ R + D KKA
Sbjct: 312 IFAQTVPTCPKCHEENDGIMKPDIVFFGEKLPDEFNRIFQEDRKKA 357
BLAST of mRNA_H-paniculata_contig45706.11455.1 vs. uniprot
Match: A0A168NCZ8_ABSGL (NAD-dependent protein deacetylase n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168NCZ8_ABSGL) HSP 1 Score: 52.4 bits (124), Expect = 1.350e-6 Identity = 20/40 (50.00%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 1 VMRQEVPQCPVCRRGVMKPDITFFGEKLPNAV-KRAVEAD 117
+++ ++P+CP C++G++KPDITFFGE LP KR V+ D
Sbjct: 169 ILQSQIPRCPACKKGLIKPDITFFGESLPKRFFKRLVDFD 208
BLAST of mRNA_H-paniculata_contig45706.11455.1 vs. uniprot
Match: UPI000C719A86 (NAD-dependent protein deacetylase sirtuin-2 n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C719A86) HSP 1 Score: 51.6 bits (122), Expect = 2.540e-6 Identity = 23/43 (53.49%), Postives = 28/43 (65.12%), Query Frame = 1
Query: 1 VMRQEVPQCPVCRRGVMKPDITFFGEKLPNAVKRAVEADHKKA 129
+ + VP+C C GV+KPDI FFGE LP+ R VE D KKA
Sbjct: 211 IKKTTVPKCENCSGGVVKPDIVFFGENLPDRFHRMVENDFKKA 253
BLAST of mRNA_H-paniculata_contig45706.11455.1 vs. uniprot
Match: A0A0L0H9S1_SPIPD (Deacetylase sirtuin-type domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H9S1_SPIPD) HSP 1 Score: 51.2 bits (121), Expect = 3.490e-6 Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 1
Query: 1 VMRQEVPQCPVC---RRGVMKPDITFFGEKLPNAVKRAVEADHKK 126
+ +++VP CPVC R G+MKPDITFFGE LP+ R D +K
Sbjct: 318 IFQKKVPMCPVCGEERDGIMKPDITFFGEMLPDEFDRLFAEDKEK 362
BLAST of mRNA_H-paniculata_contig45706.11455.1 vs. uniprot
Match: J9K5K3_ACYPI (Deacetylase sirtuin-type domain-containing protein n=16 Tax=Aphididae TaxID=27482 RepID=J9K5K3_ACYPI) HSP 1 Score: 51.2 bits (121), Expect = 3.500e-6 Identity = 21/41 (51.22%), Postives = 29/41 (70.73%), Query Frame = 1
Query: 1 VMRQEVPQCPVC--RRGVMKPDITFFGEKLPNAVKRAVEAD 117
V Q +P+CP+C G+MKPDI FFGE LP++ +A+E D
Sbjct: 402 VFEQRIPRCPICVNSTGIMKPDIVFFGEGLPDSFHKAIEDD 442
BLAST of mRNA_H-paniculata_contig45706.11455.1 vs. uniprot
Match: A0A1B6J1S6_9HEMI (Deacetylase sirtuin-type domain-containing protein n=5 Tax=Proconiini TaxID=565685 RepID=A0A1B6J1S6_9HEMI) HSP 1 Score: 50.8 bits (120), Expect = 4.780e-6 Identity = 24/45 (53.33%), Postives = 29/45 (64.44%), Query Frame = 1
Query: 1 VMRQEVPQCPVC------RRGVMKPDITFFGEKLPNAVKRAVEAD 117
V +Q++PQCPVC RGVMKPDI FFGE LP + A+ D
Sbjct: 323 VFQQKIPQCPVCPANSEMSRGVMKPDIVFFGEGLPESFHTAMAKD 367
BLAST of mRNA_H-paniculata_contig45706.11455.1 vs. uniprot
Match: W4FQG3_9STRA (Deacetylase sirtuin-type domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQG3_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 6.530e-6 Identity = 19/41 (46.34%), Postives = 28/41 (68.29%), Query Frame = 1
Query: 7 RQEVPQCPVCRRGVMKPDITFFGEKLPNAVKRAVEADHKKA 129
+ +P+CP C G++KPDITFFGE L +A + A+ D +A
Sbjct: 259 KDHIPKCPQCNDGILKPDITFFGEALHDATRHALPVDRTQA 299
BLAST of mRNA_H-paniculata_contig45706.11455.1 vs. uniprot
Match: A0A2H8U0Z3_9HEMI (NAD-dependent deacetylase sirtuin-1 (Fragment) n=2 Tax=Aphidini TaxID=33387 RepID=A0A2H8U0Z3_9HEMI) HSP 1 Score: 50.1 bits (118), Expect = 8.940e-6 Identity = 20/41 (48.78%), Postives = 29/41 (70.73%), Query Frame = 1
Query: 1 VMRQEVPQCPVC--RRGVMKPDITFFGEKLPNAVKRAVEAD 117
V Q +P+CP+C G+MKPDI FFGE LP++ +A++ D
Sbjct: 281 VFEQRIPRCPICVNSAGIMKPDIVFFGEGLPDSFHKAIDDD 321 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45706.11455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig45706.11455.1 >prot_H-paniculata_contig45706.11455.1 ID=prot_H-paniculata_contig45706.11455.1|Name=mRNA_H-paniculata_contig45706.11455.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=46bp MRQEVPQCPVCRRGVMKPDITFFGEKLPNAVKRAVEADHKKAIYE*back to top mRNA from alignment at H-paniculata_contig45706:553..693- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig45706.11455.1 ID=mRNA_H-paniculata_contig45706.11455.1|Name=mRNA_H-paniculata_contig45706.11455.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=141bp|location=Sequence derived from alignment at H-paniculata_contig45706:553..693- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig45706:553..693- >mRNA_H-paniculata_contig45706.11455.1 ID=mRNA_H-paniculata_contig45706.11455.1|Name=mRNA_H-paniculata_contig45706.11455.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=276bp|location=Sequence derived from alignment at H-paniculata_contig45706:553..693- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |