mRNA_H-paniculata_contig4547.11414.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4547.11414.1
Unique NamemRNA_H-paniculata_contig4547.11414.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4547.11414.1 vs. uniprot
Match: D7FWS7_ECTSI (Deoxyhypusine hydroxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWS7_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 2.200e-119
Identity = 236/325 (72.62%), Postives = 264/325 (81.23%), Query Frame = 3
Query:  435 GAAVSQKQQQPPLDQLQQCLMDRAQPIGKRTHAAFFLRTLGTPEAVSAVCEALLVSDDSALLRHELAYILGQMQDASACVTLEKVLEDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPEVSQTCQLSLDLMAWRRKQGVVSAGTDSTTGKK---GYDAGNPYLSVDPAPSCNAGNEEEAAEGEASGVVATEQMAERLRDQSRSLFQRYRAMFSLRNQGGEAAAMALASAFVDEDNALFKHEVAYVLGQMQHPATVPALGSILADLREHQMVRHEAAEALGAIGGEEAERLLRDFKDDKVDAVKESCEVALDTMEYWSSR 1400
            G  V +K++ PPL QL++CL+DR QPI KRTH+AFFLRTLG+ EAVSAV EALLV +DSALLRHELAYILGQMQD +AC TLEKVL +  XXXXXXXXXXXXXXXXXXXXXXXXXX     PAPEVSQTCQL+LDL+AWRRKQG     T +  G K   G DA NPYLSVDPAPSC  G+     EG   G   TE+M +R+RD  R+LF+RYRAMFSLRN+GGEAAA+ LA+AF  EDNALFKHEVAYVLGQMQHPATVPALG++LADL EHQMVRHEAAEALGAIGG EAE LLR F  D V AVKESCEVALDT++YWS+R
Sbjct:    2 GGEVQEKKEIPPLQQLRECLLDRGQPIAKRTHSAFFLRTLGSAEAVSAVGEALLVEEDSALLRHELAYILGQMQDEAACETLEKVLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFASDPAPEVSQTCQLALDLIAWRRKQGTSPYATATGGGGKADRGLDA-NPYLSVDPAPSCGEGS---GGEGVGEG---TEEMGKRVRDGDRTLFERYRAMFSLRNRGGEAAALELAAAFRGEDNALFKHEVAYVLGQMQHPATVPALGTVLADLAEHQMVRHEAAEALGAIGGNEAEGLLRTFMADDVVAVKESCEVALDTIDYWSNR 319          
BLAST of mRNA_H-paniculata_contig4547.11414.1 vs. uniprot
Match: A0A835ZDK9_9STRA (Deoxyhypusine hydroxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK9_9STRA)

HSP 1 Score: 275 bits (702), Expect = 3.650e-83
Identity = 196/317 (61.83%), Postives = 224/317 (70.66%), Query Frame = 3
Query:  465 PPLDQLQQCLMDRAQPIGKRTHAAFFLRTLGTPEAVSAVCEALLVSDDSALLRHELAYILGQMQDASACVTLEKVLEDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPEVSQTCQLSLDLMAWRRKQGVVSAGTDSTTGKKGYDAGNPYLSVDPAPSCNAGNEEEAAEGEASGVVATEQMAERLRDQSRSLFQRYRAMFSLRNQGGEAAAMALASAFVDEDNALFKHEVAYVLGQMQHPATVPALGSILADLREHQMVRHEAAEALGAIGGEEAERLLRDFKDDKVDAVKESCEVALDTMEYWSSRA*CSG 1415
            PP+  L  CL D AQP+GKRTHAAF+LRT+G  +AV A+  AL   DDSALLRHEL YILGQMQD  AC  LE++     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX APEVSQTCQL+LDL+ +R +Q       D+ T     DA NPYLS+DPAPSC                V  E++  +L D S  LF RYRAMFSLRN+G E A +AL+SAF DE N+LFKHEVAYVLGQM H A+VPAL ++L D  EH+MVRHEAAEALGAIGG EAE LL  F  D    VKESCEVAL+T++YW   A   G
Sbjct:   17 PPVPALGACLADTAQPLGKRTHAAFYLRTIGGADAVDAIAVALRNRDDSALLRHELGYILGQMQDMRACTALEEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVSQTCQLALDLIGYRNRQ-----SEDTATP---LDA-NPYLSIDPAPSCPK-------------EVPVEELRRQLLDASLPLFARYRAMFSLRNRGTEDAVLALSSAFQDEPNSLFKHEVAYVLGQMAHVASVPALSAVLKDTSEHRMVRHEAAEALGAIGGAEAEALLAAFAGDDAVVVKESCEVALNTIDYWKGGASADG 311          
BLAST of mRNA_H-paniculata_contig4547.11414.1 vs. uniprot
Match: A0A7S2V0Z7_9STRA (Deoxyhypusine hydroxylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0Z7_9STRA)

HSP 1 Score: 256 bits (654), Expect = 5.220e-76
Identity = 160/312 (51.28%), Postives = 209/312 (66.99%), Query Frame = 3
Query:  465 PPLDQLQQCLMDRAQPIGKRTHAAFFLRTLGTPEAVSAVCEALLVSDDSALLRHELAYILGQMQDASACVTLEKVLEDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPEVSQTCQLSLDLMAWRRKQ---GVVSAGTDSTTGKKGYDAGNPYLSVDPAPSCNAGNEEEAAEGEASGVVATEQMAERLRDQSRSLFQRYRAMFSLRNQGGEAAAMALASAFVDEDNALFKHEVAYVLGQMQHPATVPALGSILADLREHQMVRHEAAEALGAIGGEEAERLLRDFKDDKVDAVKESCEVALDTMEYW 1391
            PPL+ L++C++  ++P+ KRTHAAF+LRT+ + EAV A+C+A+   +DSALLRHELAYILGQMQ+ +A            XXXXXXXXXXXXXX                  APE+ +TCQL+LDL+ W++ Q   G   A +D           NPY SVDP+P+              S  ++ E + ERL D+SR+LF RYRAMFSLRN+GGE A +ALA+  +  ++ALF+HEVAYVLGQ+QHPA  PAL  +L D  E++MVRHEAAEALGAIGG + E++L++F DDK + VKESCEVALDT+ YW
Sbjct:   15 PPLENLKECVLQTSEPVAKRTHAAFYLRTINSKEAVEAICQAVSNKEDSALLRHELAYILGQMQNTAAXXXXXXXXXXXXXXXXXXXXXXXXXXAIGDPSSTDVLKQFADHTAPEIRETCQLALDLIEWKQSQEAQGAAGAQSDLDL--------NPYQSVDPSPA-------------ESKDLSIEDLKERLMDESRALFSRYRAMFSLRNRGGEEAVLALAAG-LKGNSALFRHEVAYVLGQVQHPAAAPALVEVLRDENENRMVRHEAAEALGAIGGADTEQVLKEFFDDKEEVVKESCEVALDTINYW 304          
BLAST of mRNA_H-paniculata_contig4547.11414.1 vs. uniprot
Match: A0A7S4DDJ9_HETAK (Deoxyhypusine monooxygenase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDJ9_HETAK)

HSP 1 Score: 246 bits (627), Expect = 4.140e-72
Identity = 165/314 (52.55%), Postives = 204/314 (64.97%), Query Frame = 3
Query:  465 PPLDQLQQCLMDRAQPIGKRTHAAFFLRTLGTPEAVSAVCEALLVSDDSALLRHELAYILGQMQDASACVTLEKVLEDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPEVSQTCQLSLDLMAWRRKQGVVSAGTDST--TGKKGYDAGNPYLSVDPAPSCNAGNEEEAAEGEASGVVATEQMAERLRDQSRSLFQRYRAMFSLRNQGGEAAAMALASAFVDEDNALFKHEVAYVLGQMQHPATVPALGSILADLREHQMVRHEAAEALGAIGGEEAERLLRDFKDDKVDAVKESCEVALDTMEYWSSR 1400
            P L  L+ CL++ ++PI KRTHAAFFLRTLGT EAV  +C A++ S DS LLRHEL YILGQ                  XXXXXXXXXXXXXXX                PA EVS+TC+L+LDL+ W+R Q   +A  ++    G++G    NPYLSVDPAP+       EAA    +G+ A      +L D S  LF RYRAMFSLRN+G E A +ALA    D  +ALF+HEVAYVLGQ+QHPA+VPAL + L    E++MVRHEAAEALGAIGG  A+R+L+++ DD+   VKESCEVALDTM+YW+  
Sbjct:    5 PALQDLEACLLNSSEPIAKRTHAAFFLRTLGTGEAVEVICRAVVDSSDSPLLRHELCYILGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGDEGSFEILEKFCDDPAIEVSETCKLALDLIRWKRDQAAAAAAGEAAPAAGEEGELDRNPYLSVDPAPA-------EAAAETVAGLRA------KLLDPSLGLFARYRAMFSLRNRGTEEAVLALADGLGDP-SALFRHEVAYVLGQVQHPASVPALCAALEKQGENRMVRHEAAEALGAIGGARAQRVLQEYLDDQEGCVKESCEVALDTMDYWAKH 304          
BLAST of mRNA_H-paniculata_contig4547.11414.1 vs. uniprot
Match: A0A8K1FT74_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FT74_PYTOL)

HSP 1 Score: 239 bits (610), Expect = 7.200e-70
Identity = 161/310 (51.94%), Postives = 208/310 (67.10%), Query Frame = 3
Query:  465 PPLDQLQQCLMDRAQPIGKRTHAAFFLRTLGTPEAVSAVCEALLVSDDSALLRHELAYILGQMQDASACVTLEKVLEDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPEVSQTCQLSLDLMAWRRKQGVVSAGTDSTTGKKGYDAGNPYLSVDPAPSCNAGNEEEAAEGEASGVVATEQMAERLRDQSRSLFQRYRAMFSLRNQGGEAAAMALASAFVDEDNALFKHEVAYVLGQMQHPATVPALGSILADLREHQMVRHEAAEALGAIGGEEAERLLRDFKDDKVDAVKESCEVALDTMEYWS 1394
            P  D L+  L+D +QP+GKRT A F+LRT G  E +  + +AL    DS L+RHELAY++GQ QDA AC TL+ ++E   XXXXXXXXXXXXXXXX               PAPEVS+TC+L+L L+ ++ +    +AG      K+     NPYLSVDPAP         AAE +    V+TE++   L D SRSLF RYRAMFSLRN+  E AA+ALASAF D+ +ALF+HE+AYV+GQM++P TVP+L  +L +  EH+MVRHEAAEALGAIG  E E +L+ +  D+   V+ESCEVALD M+YW+
Sbjct:    6 PTFDALRDALLDLSQPMGKRTRAVFYLRTRGQKEDLQVLLKALENKKDSELMRHELAYVIGQFQDADACETLQAIVEXXXXXXXXXXXXXXXXXXXGHEKALPVLEKFAKDPAPEVSETCELALRLIKYKAQH---AAGEI----KENEHDRNPYLSVDPAP---------AAEKD----VSTEELKAVLLDNSRSLFDRYRAMFSLRNRNTEDAALALASAF-DDSSALFRHEIAYVMGQMENPVTVPSLKKVLMNHSEHRMVRHEAAEALGAIGTTECEEILQVYLKDQEQVVRESCEVALDIMDYWA 294          
BLAST of mRNA_H-paniculata_contig4547.11414.1 vs. uniprot
Match: K3WSP2_GLOUD (Deoxyhypusine hydroxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSP2_GLOUD)

HSP 1 Score: 237 bits (604), Expect = 5.400e-69
Identity = 168/312 (53.85%), Postives = 211/312 (67.63%), Query Frame = 3
Query:  465 PPLDQLQQCLMDRAQPIGKRTHAAFFLRTLGTPEAVSAVCEALLVSDDSALLRHELAYILGQMQDASACVTLEKVLEDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPEVSQTCQLSLDLMAWR--RKQGVVSAGTDSTTGKKGYDAGNPYLSVDPAPSCNAGNEEEAAEGEASGVVATEQMAERLRDQSRSLFQRYRAMFSLRNQGGEAAAMALASAFVDEDNALFKHEVAYVLGQMQHPATVPALGSILADLREHQMVRHEAAEALGAIGGEEAERLLRDFKDDKVDAVKESCEVALDTMEYWS 1394
            P  D L+  L+D +QP+GKRT A F+LRT G  E +  +  ALL   DS L+RHELAY++GQ QDA AC  L+K++ED SXXXXXXXXXXXXXXXXXXXXXXXXXXX    PAPEVS+TCQL+L L+ ++  + +G +  G             NPYLSVDPAP+              S  V TE +   L D ++SLF RYRAMFSLRN+    AA+ALA  + D  +ALF+HE+AYV+GQM++P TVPAL  +L D  EH+MVRHEAAEALGAIG  E E +L+ +  D    V+ESCEVALD ++YW+
Sbjct:    8 PTFDALRDSLLDLSQPMGKRTRAVFYLRTRGQKEDLQVLLTALLNKKDSELMRHELAYVIGQFQDADACEILQKIVEDASXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKDPAPEVSETCQLALRLIKYKVEKARGEIQEGEHDR---------NPYLSVDPAPAV-------------SKDVPTEALKATLLDPTKSLFDRYRAMFSLRNRNTPDAALALAEGYSDS-SALFRHEIAYVMGQMENPVTVPALKKVLMDDNEHKMVRHEAAEALGAIGTPECEEILQVYLKDSEQVVRESCEVALDAIDYWA 296          
BLAST of mRNA_H-paniculata_contig4547.11414.1 vs. uniprot
Match: A0A6G0XI33_9STRA (Deoxyhypusine hydroxylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI33_9STRA)

HSP 1 Score: 234 bits (598), Expect = 3.570e-68
Identity = 151/311 (48.55%), Postives = 200/311 (64.31%), Query Frame = 3
Query:  465 PPLDQLQQCLMDRAQPIGKRTHAAFFLRTLGTPEAVSAVCEALLVSDDSALLRHELAYILGQMQDASACVTLEKVLEDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPEVSQTCQLSLDLMAWRRKQGVVSAGTDSTTGKKGYDAGNPYLSVDPAPSCNAGNEEEAAEGEASGVVATEQMAERLRDQSRSLFQRYRAMFSLRNQGGEAAAMALASAFVDEDNALFKHEVAYVLGQMQHPATVPALGSILADLREHQMVRHEAAEALGAIGGEEAERLLRDFKDDKVDAVKESCEVALDTMEYWSS 1397
            P  DQL++ L+D +QP+GKRT A F+LRT G  + +  + +AL    DS L+RHELAY++GQ Q+A AC TLE ++ DT    XXXXXXXXXXXXXXX             PAPEV++TC L+L L+ ++          D           NPYLSVDPAP+ +                +T+++ E L D SRS+F RYRAMFSLRN+  E AA+ALA+AF D  +ALF+HE+AYV+GQM +P T+P+L  +L +  EH+MVRHEAAEALGAIG  E E +L+ +  D    V+ESCEVALD ++YWS+
Sbjct:    5 PSFDQLRESLLDLSQPMGKRTRAVFYLRTRGGKDDLQVLLDALRNKKDSELMRHELAYVIGQFQNADACPTLESIVADTEDDCXXXXXXXXXXXXXXXSSSIDILERFAQDPAPEVAETCALALRLVKYKNTDHPEEGEMDR----------NPYLSVDPAPAMDK-------------TKSTQELKEILLDSSRSMFDRYRAMFSLRNRNTEEAALALAAAFNDS-SALFRHEIAYVMGQMVNPVTIPSLKEVLVNESEHRMVRHEAAEALGAIGTPECEEILQVYLKDSQQVVRESCEVALDIIDYWST 291          
BLAST of mRNA_H-paniculata_contig4547.11414.1 vs. uniprot
Match: A0A067CPP4_SAPPC (Deoxyhypusine hydroxylase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CPP4_SAPPC)

HSP 1 Score: 233 bits (595), Expect = 9.190e-68
Identity = 166/314 (52.87%), Postives = 210/314 (66.88%), Query Frame = 3
Query:  465 PPLDQLQQCLMDRAQPIGKRTHAAFFLRTLGTPEAVSAVCEALLVSDDSALLRHELAYILGQMQDASACVTLEKVLEDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPEVSQTCQLSLDLMAWRRK----QGVVSAGTDSTTGKKGYDAGNPYLSVDPAPSCNAGNEEEAAEGEASGVVATEQMAERLRDQSRSLFQRYRAMFSLRNQGGEAAAMALASAFVDEDNALFKHEVAYVLGQMQHPATVPALGSILADLREHQMVRHEAAEALGAIGGEEAERLLRDFKDDKVDAVKESCEVALDTMEYWS 1394
            P  DQL+  L+D ++P+GKRT A F+LRT G  E +  + EAL+   DS L+RHELAY++GQ QDA AC TLE V+ DTSXXXXXXXXXXXXXXXXXXXXXXXXXX      APEV++TC+L+L L+ ++      +GV+                NPYLSVDPAP+                   T+++   L D SRS+F RYRAMFSLRN+  E AA+AL  AF D+ +ALF+HE+AYV+GQM +P TVPAL  +L D  EH+MVRHEAAEALGAIG  E E +L+ +  D    V+ESCEVALD ++YW+
Sbjct:    5 PSFDQLRASLLDLSEPMGKRTRAVFYLRTRGGKEDLKVLLEALVNKADSELMRHELAYVIGQFQDADACPTLESVVADTSXXXXXXXXXXXXXXXXXXXXXXXXXXKFSHDEAPEVAETCELALRLVKYKHTPVEDEGVLDR--------------NPYLSVDPAPAMEK-------------TKTTDELKAILLDTSRSMFDRYRAMFSLRNRNSEDAALALGEAFNDK-SALFRHEIAYVMGQMVNPVTVPALKKVLIDASEHRMVRHEAAEALGAIGTPECEEILKVYVKDDHQVVRESCEVALDIIDYWA 290          
BLAST of mRNA_H-paniculata_contig4547.11414.1 vs. uniprot
Match: A0A1V9YBB6_9STRA (Deoxyhypusine hydroxylase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YBB6_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.040e-67
Identity = 164/310 (52.90%), Postives = 211/310 (68.06%), Query Frame = 3
Query:  465 PPLDQLQQCLMDRAQPIGKRTHAAFFLRTLGTPEAVSAVCEALLVSDDSALLRHELAYILGQMQDASACVTLEKVLEDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPEVSQTCQLSLDLMAWRRKQGVVSAGTDSTTGKKGYDAGNPYLSVDPAPSCNAGNEEEAAEGEASGVVATEQMAERLRDQSRSLFQRYRAMFSLRNQGGEAAAMALASAFVDEDNALFKHEVAYVLGQMQHPATVPALGSILADLREHQMVRHEAAEALGAIGGEEAERLLRDFKDDKVDAVKESCEVALDTMEYWS 1394
            P  DQL+  L+D ++P+GKRT A F+LR+ G  + +  + +AL    DS L+RHELAY++GQ QDA AC TLE V+ D  XXXXXXXXXXXXXXXXXXXXXXXXXX     PAPEV++TC+L+L L+ ++  Q            ++G    NPY SVDPAP+                  +TE++ + L D SRSLF RYRAMFSLRN+  E AA+ALA+AF D+ +ALF+HE+AYV+GQM +P TVPAL  +L D  EH+MVRHEAAEALGAIG  E E +L+ +  D    V+ESCEVALD ++YW+
Sbjct:    5 PAFDQLRASLLDLSEPMGKRTRAVFYLRSRGGKDDLRVLLDALTNKADSELMRHELAYVIGQFQDADACQTLETVVADXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYSKDPAPEVAETCELALRLVKYKNSQQAPE--------EEGSLDRNPYYSVDPAPAMEK-------------TKSTEELKQILLDTSRSLFDRYRAMFSLRNRNTEDAALALAAAF-DDKSALFRHEIAYVMGQMINPVTVPALKKVLVDASEHRMVRHEAAEALGAIGTPECEEILKVYVKDDHQVVRESCEVALDIIDYWA 292          
BLAST of mRNA_H-paniculata_contig4547.11414.1 vs. uniprot
Match: A0A5D6XV30_9STRA (Deoxyhypusine hydroxylase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV30_9STRA)

HSP 1 Score: 232 bits (591), Expect = 4.920e-67
Identity = 155/311 (49.84%), Postives = 198/311 (63.67%), Query Frame = 3
Query:  465 PPLDQLQQCLMDRAQPIGKRTHAAFFLRTLGTPEAVSAVCEALLVSDDSALLRHELAYILGQMQDASACVTLEKVLEDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPEVSQTCQLSLDLMAWRRKQGVVSAGTDSTTGKKGYDAGNPYLSVDPAPSCNAGNEEEAAEGEASGVVATEQMAERLRDQSRSLFQRYRAMFSLRNQGGEAAAMALASAFVDEDNALFKHEVAYVLGQMQHPATVPALGSILADLREHQMVRHEAAEALGAIGGEEAERLLRDFKDDKVDAVKESCEVALDTMEYWSS 1397
            P  D L   L+D +QP+GKRT A F+LRT G    +  + +ALL   DS L+RHELAY++GQ QD  AC TL K++ED     XXXXXXXXXXXXX               PAPEVS+TC+L+L L+ ++    + +A  +   G+  +D  NPYLSVDPAP+              S  V T  +   L D S+SLF RYRAMFSLRN+  E AA+ALA  + D  +ALF+HEVAYV+GQM++P TVPAL  +L D  EH+MVRHEAAEALGAIG  E E +L+ +  D    V+ESCEVALD M+YW++
Sbjct:    8 PSFDALAASLLDLSQPMGKRTRAVFYLRTRGQKADLQVLLQALLNKKDSELMRHELAYVIGQFQDPDACETLAKIVEDVEDDGXXXXXXXXXXXXXGHAQALPVLEKFSKDPAPEVSETCELALRLIKYK----LQAAAGEIVEGE--HDR-NPYLSVDPAPAV-------------SKDVPTAALKATLLDPSQSLFDRYRAMFSLRNRNTEEAALALAEGYGDA-SALFRHEVAYVMGQMENPVTVPALKKVLMDPSEHRMVRHEAAEALGAIGTPECEEILQVYLKDAEQVVRESCEVALDIMDYWAT 297          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4547.11414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWS7_ECTSI2.200e-11972.62Deoxyhypusine hydroxylase n=2 Tax=Ectocarpus TaxID... [more]
A0A835ZDK9_9STRA3.650e-8361.83Deoxyhypusine hydroxylase n=1 Tax=Tribonema minus ... [more]
A0A7S2V0Z7_9STRA5.220e-7651.28Deoxyhypusine hydroxylase n=1 Tax=Fibrocapsa japon... [more]
A0A7S4DDJ9_HETAK4.140e-7252.55Deoxyhypusine monooxygenase (Fragment) n=1 Tax=Het... [more]
A0A8K1FT74_PYTOL7.200e-7051.94Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WSP2_GLOUD5.400e-6953.85Deoxyhypusine hydroxylase n=1 Tax=Globisporangium ... [more]
A0A6G0XI33_9STRA3.570e-6848.55Deoxyhypusine hydroxylase n=1 Tax=Aphanomyces eute... [more]
A0A067CPP4_SAPPC9.190e-6852.87Deoxyhypusine hydroxylase n=2 Tax=Saprolegnia TaxI... [more]
A0A1V9YBB6_9STRA1.040e-6752.90Deoxyhypusine hydroxylase n=1 Tax=Achlya hypogyna ... [more]
A0A5D6XV30_9STRA4.920e-6749.84Deoxyhypusine hydroxylase n=1 Tax=Pythium brassicu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4547contigH-paniculata_contig4547:872..9394 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score376.7
Seed ortholog evalue1.1e-101
Seed eggNOG ortholog2880.D7FWS7
Preferred nameLIA1
KEGG rclassRC00003,RC00060
KEGG koko:K06072,ko:K08187,ko:K16369
KEGG TC2.A.1.13
KEGG ReactionR02056
KEGG Pathwayko00564,ko01100,ko01110,ko04919,ko04974,map00564,map01100,map01110,map04919,map04974
KEGG ModuleM00091
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006417,GO:0006464,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0008150,GO:0008152,GO:0008283,GO:0008612,GO:0009058,GO:0009268,GO:0009628,GO:0009889,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010467,GO:0010468,GO:0010506,GO:0010508,GO:0010556,GO:0010608,GO:0012505,GO:0016020,GO:0016043,GO:0016491,GO:0016705,GO:0018193,GO:0018205,GO:0019135,GO:0019222,GO:0019538,GO:0030447,GO:0031323,GO:0031325,GO:0031326,GO:0031329,GO:0031331,GO:0031984,GO:0032268,GO:0034248,GO:0036176,GO:0036177,GO:0036178,GO:0036211,GO:0040007,GO:0042175,GO:0042710,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044010,GO:0044011,GO:0044182,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044764,GO:0046872,GO:0046914,GO:0048037,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0051604,GO:0051703,GO:0051704,GO:0055114,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090605,GO:0090609,GO:0098827,GO:1901564,GO:2000112,GO:2000765
EggNOG free text desc.deoxyhypusine monooxygenase activity
EggNOG OGsCOG1413@1,KOG0567@2759
Ec32 ortholog descriptionArmadillo-like helical
Ec32 orthologEc-16_004240.1
EC1.14.99.29,2.1.1.17
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Exons7
Model size2087
Cds size993
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930362.9099572-UTR-H-paniculata_contig4547:871..12841622930362.9099572-UTR-H-paniculata_contig4547:871..1284Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4547 872..1284 +
1691481258.22834-UTR-H-paniculata_contig4547:871..12841691481258.22834-UTR-H-paniculata_contig4547:871..1284Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4547 872..1284 +
1622930363.0313773-UTR-H-paniculata_contig4547:8713..93941622930363.0313773-UTR-H-paniculata_contig4547:8713..9394Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4547 8714..9394 +
1691481258.310673-UTR-H-paniculata_contig4547:8713..93941691481258.310673-UTR-H-paniculata_contig4547:8713..9394Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4547 8714..9394 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930362.9214444-CDS-H-paniculata_contig4547:1284..14591622930362.9214444-CDS-H-paniculata_contig4547:1284..1459Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 1285..1459 +
1691481258.2399197-CDS-H-paniculata_contig4547:1284..14591691481258.2399197-CDS-H-paniculata_contig4547:1284..1459Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 1285..1459 +
1622930362.935695-CDS-H-paniculata_contig4547:3481..35381622930362.935695-CDS-H-paniculata_contig4547:3481..3538Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 3482..3538 +
1691481258.2485936-CDS-H-paniculata_contig4547:3481..35381691481258.2485936-CDS-H-paniculata_contig4547:3481..3538Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 3482..3538 +
1622930362.949901-CDS-H-paniculata_contig4547:4006..40891622930362.949901-CDS-H-paniculata_contig4547:4006..4089Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 4007..4089 +
1691481258.2645466-CDS-H-paniculata_contig4547:4006..40891691481258.2645466-CDS-H-paniculata_contig4547:4006..4089Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 4007..4089 +
1622930362.9648697-CDS-H-paniculata_contig4547:5497..55871622930362.9648697-CDS-H-paniculata_contig4547:5497..5587Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 5498..5587 +
1691481258.2743688-CDS-H-paniculata_contig4547:5497..55871691481258.2743688-CDS-H-paniculata_contig4547:5497..5587Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 5498..5587 +
1622930362.9776342-CDS-H-paniculata_contig4547:6710..69611622930362.9776342-CDS-H-paniculata_contig4547:6710..6961Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 6711..6961 +
1691481258.2828715-CDS-H-paniculata_contig4547:6710..69611691481258.2828715-CDS-H-paniculata_contig4547:6710..6961Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 6711..6961 +
1622930362.9944537-CDS-H-paniculata_contig4547:7712..78091622930362.9944537-CDS-H-paniculata_contig4547:7712..7809Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 7713..7809 +
1691481258.2914474-CDS-H-paniculata_contig4547:7712..78091691481258.2914474-CDS-H-paniculata_contig4547:7712..7809Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 7713..7809 +
1622930363.0108082-CDS-H-paniculata_contig4547:8473..87131622930363.0108082-CDS-H-paniculata_contig4547:8473..8713Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 8474..8713 +
1691481258.3006217-CDS-H-paniculata_contig4547:8473..87131691481258.3006217-CDS-H-paniculata_contig4547:8473..8713Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4547 8474..8713 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4547.11414.1prot_H-paniculata_contig4547.11414.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4547 1285..8713 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4547.11414.1

>prot_H-paniculata_contig4547.11414.1 ID=prot_H-paniculata_contig4547.11414.1|Name=mRNA_H-paniculata_contig4547.11414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=331bp
MGDREDDGAAVSQKQQQPPLDQLQQCLMDRAQPIGKRTHAAFFLRTLGTP
EAVSAVCEALLVSDDSALLRHELAYILGQMQDASACVTLEKVLEDTSDDC
MVRHEAAEALGAIGDECSVSALEKFTQDPAPEVSQTCQLSLDLMAWRRKQ
GVVSAGTDSTTGKKGYDAGNPYLSVDPAPSCNAGNEEEAAEGEASGVVAT
EQMAERLRDQSRSLFQRYRAMFSLRNQGGEAAAMALASAFVDEDNALFKH
EVAYVLGQMQHPATVPALGSILADLREHQMVRHEAAEALGAIGGEEAERL
LRDFKDDKVDAVKESCEVALDTMEYWSSRA*
back to top

mRNA from alignment at H-paniculata_contig4547:872..9394+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4547.11414.1 ID=mRNA_H-paniculata_contig4547.11414.1|Name=mRNA_H-paniculata_contig4547.11414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8523bp|location=Sequence derived from alignment at H-paniculata_contig4547:872..9394+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGGCATTGGCCTTTCTTGTCTCGGGAGAATCGCCTACGGTGTGCGGGAC GGAGAAGGTGGGCATATTAAATTAATTCAAATAATTGGGGTGGTCTCGTA TTTGTTTTTTGTAACCATATATAAAACGGGTACAATAGAGGAAAGGGGTA TTCTAAAAGTACCACGATAATGCTGCACTCCTTGGGAACAATACCTCGAC CTTTTTTTTTTTCAAAATCCAAGTGGCCATCGTGTTATTCCTGAAATACC AAATAACGAATACCGTTTGCTCCCTACCGGCTTTACTCAATAGGACCCGT TTTATAGGCGGTTTAAAAAAAAGTGTCCAACTCTGTACCCAATTTAGGAC TGCTGTGCATACGCTAGCGTGCCGCGTTCGCTGCTATCTGGGGGTGTGTG GTGCGTACATATCATGGGCGATCGCGAGGATGATGGTGCTGCTGTCTCGC AGAAGCAGCAGCAGCCGCCACTGGACCAGCTCCAGCAATGTCTGATGGAC CGCGCCCAGCCTATTGGTAAGAGGACGCACGCTGCCTTCTTCTTGAGGAC GCTCGGTACACCAGAGGCGGTGAGCGCCGTCTGCGAAGGTATGATATTTG CGTGCAGAGGGTAAACTTCTGCACAGAGAGAGCGATCCATATATGGGAGG ATAGAGATGGGGTTTCGGTTGTACGTTGAGGCGTCGCTCTTTACAGCAGG CGGTTGTTTCTCACTCATCTGCACGGCAAAGTACAATCATAGCCACATAA CGGAGTACGCATGTGCAGACAGTTCGTATAGAGTAGAGCAGCCAGGAAAG GCACCATGTTTTCATTTGTGTTTGTACTGCTTCGAATTACTCAATTACAT CACCTCTCTAAGATGTGCATACTGACTGTTCTGTCTATACTGACTCAGTG CGTTGGTTACCAAGAACTACTTGATTTTTCTAAAGATATACTTTCCTAGT AAAAGAGGTGAAAAGCCACCCATACCTGCGGCATGTTGTGTCCATCACTG AAGAAACAACGTTTTTTCAAGAGAGTGAGGGGTGTAGGGTCACAGTGAGT ATCTACTGTGTGTGTGTCACATTTCAGTAGGTGTACACATAAACAGTCAA AAGACCTTTCTGCTCGCTAATCTCTCTTGGAGTTACCTTCACAGACAGAA GCATGCAACTAGAGTCCCGAGAGTGGTGGTGTTTTTTGCATGGACCCCTG TTTGACAATCGGAAAACAATCCGTATTTAGCTCAAGAATGAAAATTTAAC CCGGTTCCAATATCATTGTAACAGACAGGCCAAAGTTCAGTCATACGTAT GTTCTGTATATCATTCGTCGTCTATCATGGCCAGCATGAGCCATTGCAAA GCAAATGGCAGAGCTACCTCGAGGACGCCCAGCTGTGGCTGACTTCATAG CGGCAGGCCGCGACGGTTTGATTGTGCGTGGAAATTGCGGCTGGAAGTGT GCATTTCTTGAGAAAAAAACTGATCCCGACTGTGGGATGGTGGACGTTGC AGTGACCTTGCAAGCGTTGCAGTCCTCGGGAAAATTGCAGTCAATGCTAC CCAGGGCATGGGTGCTCTGTCTCGCGACAATTGCAGTGTACTTTAGAATC TTACAGTCAGTGTTACTACCTCGGGCATTGTGGCAACATGGGTTGGAAAA TGACAGGCGCACTGTGCATTAAAAAACACACACACAAAATGACTCACACT GTCCGAACTTGTGGCTGGACCAATTGAGTTGCTCAGTGGTGAGCTGCTTT CTGTACAGCAACAAATCTTAGGGTTTGTCCGGACAATAACCCCATGCAGA CAGCAGACACAAGGAACATAATTAACCCGCCCGCGTTGCCATCGATGTCA GGGTGAGATTGTCCCCGGTGTGGGACAGTATCGTTGAGTGTAGCGCAACA AAGATCGAGAGCTGCTTCGTTCCACAGTTGTGGTCTCAAGAGTCATGTTA CTGTAGTCATGTCTCAAGAACTACTTGATTTCAATAGAGCACCTACGTCC CATCCCTGTACCCCTTCCCCTCCCATTCCCATCAACCCCTTTACAAGTAT TGTAGCTCAGTGAGCACTTTTAATCGTGGACTTGTATTTTCCCTAGACAA AATCCCCTCTGGTGCAACAACTTCGGTGGCGTGGAGCTCGTCGAGGTTCG TACCGAAAGGACTGGAGTTGGTGCGAAACAGTTCGTATGAACGTGTAGAG GACATCTTGTTCATCCCTTGTTGCAAACTCCCCAAGCCGCGAGTTACTAC TGTGGGACATACTGATATAGCCCGAAAACCCTATTTTCTTACGGGAAAAA ATCCAGTTTTGGCTGTAAGTTCATGGTTTTTCAATATTTTCGACACTAAC CGGTCCACTATGTTTTTTGTGTTCACTGACGGCACTAGTAAACAGATCCG TATTGAAACATTTGCCGTACTTGTCGAGATATGGCGATGATATCATTAGT ATGTCCCACCGTGGTAGTACAGCACAGCTATAGATAAAATCCAACATGCG CCCCCACGGTCCCCCCGCTTACCTCGATCTACCCCCCCCCTCTCTCGCTT CTCTTTGTCTCCTGTTTGAATTATTTTTTCCATATTGGTGCTTGTGCGCG ATGTGAGCAGCTTTACTTGTATCGGATGACTCGGCACTGCTACGTCATGA GCTCGCCTACATTTTGGGTAGGTTTTTTTTTTTTTTTTTTTGTCTTTGTA CTTGGGGATTAGTACGTCGTTGACTCGCTGCTACAGATATAGTACCGTGA CGTAGTATCATAACTCTCCTACAGGTACTATTACACCATATATTGGAGAG ATCAGTGGTATTATCGGTAGACAAGTAGAAAAGGGTCTATATACTAATAG GGTGTTTGAGCAAAAGACGAATTTCTTTCGTAAATTTCGTTTGCTCGTCG CAAACACCATCCGGACCGCAGATCACGACAGCAGCATATTCTCGATGCTG CATTACCACGCACCTTGCACAGCCAGCAGCACTTGAAAAATTCGCCCGAA CGGTTGAACTACACTGCGTCGAGGTTCGACCTTGTCTATGTGCTGCTGCT GCTACTGCTGTTGTTGCCGCACCACCTTATCTGCATCTGTTTTCTTTTTG GCCAACGGTTGGATGCTTTTGCATGGCCCTGATAGGACAAATGCAGGATG CGAGCGCGTGCGTGACGCTGGAAAAGGTACTGGAGGACACGTCTGACGAC TGTATGGTCCGACATGAGGTACGAAACACGCTCCCACTTATGCCGGTACT TAATTTTCCTTTTTGCATGTCGTACCTGTTAGACCATGGACCACACATGT AATCCTCGGGAGGACGGAGGTGTTTGTTCTCCCATCAGAGCGATTCTGGA TGGCCAATCGCTCTTTTTTACGTTCCTATTTGTGTCTCAATTTTTTTTTT GGCCTACCCTATCCTCCTTAATTCCCTTGGCTTTTTCAGGAGAATTTACA TTTTCTGACAGGTATTCGTTCGCGTCCGGGGGATGAATTTTTGCGGTATA TATATATTGTATTTCTTGTCGTTGTGATGTAGTATTGTCTTGCTTTCATA GACACCGCTGACCTAACTAAAATGTGGACTCCTGGGCCGTCGAAGAGTGC AGGTGCCAAAAGCAGTACGATTTGGTGCCCGTTAGAGTATAGAATTACCT TTTTAGAAAAAAAATAAATAATAGTGATGAAATTTGAGAACACTATGCTC CCGGGAGAGGTTGGCTCTCGGGGGAACACCACCTGCTCTGTGCGGGTCGG TTCTAGGTCTTGGGGTGTAGTGTGGAGTAAGCATTTGGGTTTTGTTCTGT CGTACATGGACTGCTCATCCAGGGTCGAACACAGCCAGAAAGCTGTTTCG AGAAGGGGACAAAATACCATTGGTCGTTGTGTAGGGAGCCGTGTTTGAGA ACCCCAGGAACGTCAGGAACGTGCTCTCCACGAACTGTTTATTATTGTTT TTTTTTTTGTGTGTTTTTACACCACAGAGGTTTTGGAAAACTTACGTACT TGAAGGAACTACGGCACCCTGTTTGTTGCTGTTTGTCGAGCCTCAGCTTG ACCGGCGATGGAGGAATTTGCTTACAAATATGGTGGGGGGAAATACGAGA AATCGGGGAGCACACTGACGAGGAGAGCGTTGTTTGCCGCGAGCGACGTA CATTTTGCATGTCGTCCTATGACATGAGGTGTCTTCTATATTTCACGTCG AGGTTGGCTGGTCACTCGTGGGAGTGGCGATATATGTATCAACCTCTTCT TGAGGTAGAAAAAATGTAATGTTGTGTTCCGCCACGTGACTCCAAGCACG AATCAAGAATTATAATAAATAAACAGTTCAAATTGACTCGGTCGAAATGT ATGGATATTCGCTCGCGAGGGTGACTCCTGCCGCCGAAAAGGAGTAACCC CAGATAACACCCCTCTGACGTAGGACGACTCATACCTCGAGCTATGGTTG CTCAATATAATATAATCAAGAACAAGCAGTGTTTTTACTCTTTCTGTTTA TTTCTGTTTATCTCTCATTTTTTTCCTTCTTGTCTATTCTCGTTTCTTAC GTTGTCCTGAACGAACGAAAATATTGAAATAGCGTCTCCTCCTCATGGTT CGCCGGGCACTATTTGTTCATTGAAGGCTGCGGAAGCGTTGGGGGCTATC GGCGATGAGTGCTCGGTGTCTGCGCTGGAGAAGTTCACCCAAGACCCTGC GCCGGAAGTGTCTCAGGTTACGTCAGCTGTACGAAGTAGATGCTGTTTCG GGAGAGGAACAAGGGCCAGAGGAAAAGCGCGACATGGCTTCTCTCTTTTC TTATGTAGTAGTAGGGCGTAGTATAAAGGGTATGGATTCAAGTAACGTTT TTAGTGTGGTGTGGTTTCGTTCGGTGTGGGTTAGGTTGTATGTATGTAAT TTTTGCATGTTTAAGATGGTGCAGTACCGTCCAATGCCAACGCATTACTG ACTTCTCTAGGTATAAAAAGTACATGAGAACAGCTCTTTTAAACGTGTTA CTGCTAGTGTTTGTTGAATACGCGTAAATAATAACTGCTTGGGTGTCATG TGTCCTGTTTTTTTTTTGTTTTTCCCATCTGGGACTGAAAATGCTGCACG GTCCCTTTCAGCGATTTGCAGGTTGTAACTGAAAAAGGTTTTTTTTTTTA AAATCATGTTTTGGTTGTACTATTCTCAACCCCCCTCTCCCCCTTGTGAG GTAAATCGTGCATTTGGGGGGACCCAATTCACGTAGCGAGAAAAGGCCCT CCGTCGGAAAAAGAGATATGAATGTAACCGAGAGAATCCAGTAGAAGTTG AAGGGTGCGATAGAGAAGGTCTCTGGATGCTCGGGATTGCGAAAAGCAGG CGATAGCTGTTCTAGGCGATAGAAATTGGCCTGAACTGGCGAGGGTTGAG GAAAATACTAACTAGTTCGATAGGATAGGTAAAACATTTTGGAGGCATAT TTGGCAACGTAGGAAAATGCGATTAGCCATCGGAGTTCGATAGGACAGAA AGAAGAGAGCTCCGTCCTCTTCGGATGCGTGCTCAATGGTCCAACAACTA TGGTGTGAAAACATGACGATCCCCCCCCCCCCCCCCTCGTGATGGTCCTG GCCCCGGGACAATTGTTCGACCCTATCCTAGCATCAGTACCCGCCGGTGC TACCTTAGACCCTCCTAACTCCGCTGACGGTGCGGTACGGAAAACGCAAT GCTTGCTTCAAGGCGGCGTGGCCCGTCCTTGATGCGCCATCCCCGATCCT GGTCCCGGACACGGCATTTCTTCCTCACGCGTTCTCCGAACGCTGTTTTT TCGTGCCATCGTTTCTCTCACTCGCTCGATCTTCTTCAGACGTGCCAGTT GTCTTTGGACTTGATGGCCTGGCGGCGCAAGCAGGGAGTGGTGTCTGCTG GAACAGACTCCACGACCGGCAAGAAGGGGTACGATGCCGGTAATCCTTAT CTTTCGGTGGATCCTGCTCCCAGCTGCAATGCAGGAAACGAAGAGGAGGC AGCAGAAGGAGAAGCGTCGGGCGTTGTGGCGACAGAGCAAATGGCGGAAA GACTTCGAGACCAAAGTCGAAGTCTGTTTCAAAGATACAGGTAATTGTAG GCATGTGCGTCGAGGGGGGGGGAGGGGTCAGGGAGGTCGGCGCAGGTTCA GTTATGTCGTAATTTTTGCACTCGAGTGTGTATAATACACAGGATCGAAG AACAACGGTTTCCATTCATCTTCTCCCCGTGGTTTAGCGACGCTTTATTT GTGGTCTTGGGTGATCTCTAGTCACCCGGCCCCAAAGCTTACAATTGTTA TGGTCTCGCTCTCTCGCTTTCTGTGCTTTTTATCGTTGTCGTATATTTTC GCCATCATGGAGACGCCCTCGTCGACTGTGTTGCCTTGAAGCCGGAGGTA TATCATTGTCGGGATGCAAACCTGTTTTAAATGCAGTCGACCATTTCGAG AACGACGACATTGCGCGGTCGAAAGATCCGGTCAACCGATAGATCTCTTC AGCAAAATCTTTCCAACGGCGCATTAATATATTATTCGTTGTTGTTAGCG CCTTGAGGTATGTATGAAGTTCTCGAGATAATTGCGTTTGAAAAAAACGT TCGCACCCCGGTGATGTTGATATTTCCGGGCACTATGGTAGGTGGTGTCG TGTTTGTCATGGAGAAAATTCTCGAATTGAATAGGGTGGCTGTTTTGTTG CCGTTGCATTTGTCATACGTTTACCGATCGGGCGGCTATTTCCTTTTGCC GTGTGCTCGAAACGAAGAGCACACCATGTATCATTTAATGTCTTGCCGTG TTGTTTTTTTTTCCTCGTTTTTTGTTCCTCCTTACGGTCAGGGCCATGTT CTCGTTGAGGAACCAGGGGGGAGAAGCCGCAGCTATGGCTCTTGCCTCGG CATTTGTCGACGAGGATAATGCGCTCTTCAAGCACGAGGTTGGTTCGGGG CACACGCAAGTATTGGCGTTGATGTTATCGCCGTCGTCGCTGCCTTTATT TTCGTTTTTTTTTTTTTTAACATGTATTGCCGCGCAGCGGGTGACTGACT GTAAACCGCTGTTATCTCCTGAAGCATATAGTATTTCCTGCCGCTATGGT GTACGTACCATATATAATGTATAATTCACGCGGTAGTTCATACTTCTCCC CAATGTCTCACGTTTTGAAGATACTCTAATGGTTTATAAAGTCGTTTGAA GAAGCTTCTTCTCCACTTTTGCCACCCCTCCCCCCCCCAAAAAAATGACG TGTTGTGTCCACTCTTGGGGGGGAAAGGCAGCTGCACATGCCAAACGCTT ACTCGAAGGGACCTCCTCTTTGAAATACACGAGCCACAACACACAACACA CGTAGACACACGCATACAACGGCGTGTCACGTCACTTCTAAGCCCTTTTA TCTTGTAATGGGCTTTCGAATCTCCCTGCCTTCAAACCTGATTTTTACGA AATCCAGTACAGTTGTCTTTCTGGCTATGACAGCAAAAACAGGAACCAGG CTCCTTAAAAATCAAGTATCGGATGTGCAATAGAATCTGCCTCACTCTCT CGATTTTTCACCTTCGTTAAACACACACGCACATGCACATGCACATGCAC AGGTAGCGTATGTCCTGGGCCAGATGCAGCACCCCGCGACGGTACCGGCC CTAGGCAGCATCTTGGCCGATCTCCGAGAGCATCAGATGGTGAGGCACGA GGCGGCAGAGGCCCTGGGGGCTATTGGAGGCGAGGAAGCGGAACGGTTAC TGAGAGATTTCAAGGATGATAAAGTAGATGCCGTTAAGGAGAGCTGCGAG GTCGCCTTGGACACGATGGAATACTGGTCCTCGCGCGCCTAATGTAGCGG TTTTCTCAAGTCTCTGCTTTTTCTTTACGTGTATATGTGTGTGTGCATGT ATCCCAACGAGAAAAAGAGAGGCTGTGGGTTGCCGTACTTCACACATGCT GTGTGTATGTATAGCGTGCTATGGTCGTCTCGCGAAGTTGCGCTGAATGT GTCCTCGAAAATGGCTTGCGTGTTCTTTCTCGAGACGGAGAAGAGCAAAA GCAAAAGCTGGGTCTTATCTCTGAATCTCTAGGCAGCTCTTTTTCTATCT CGACATGTTCGCAGGGAAGGTAGAACTCTCTACAACTAGAGAGCCCATCG AAAACGTTTTGACAAAAAATAACGTCGCCTATCAACTGCGCAGGTTGTTT TTTTTATCCACAAACTCGTATATATTATGATGTTCGTAAAACCAGTAAGA TAGATAACGATGACGATTTCAACGGCGAGAGCGTTTCCGCCCTTCGTACC TTTCCTGTCTGGTACATTCGTCCGACGAATGTCACCGCCGGTGGTTGGTC ATAGTCCAAGGTTCTAGCTCTCACGACGCACGGCCCGCCCGCCGGCCCTT CTTTCTCCCCTTCCTAAATTTTGCGTCTGCTTGGTCATGATCCATATATC GTGGTCCCTTCTTCATAGTTGGAATCTTTAAAGGAGTCAATAATATATAT GATTTTGTACTCGGGGGAGTATG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig4547:872..9394+

>mRNA_H-paniculata_contig4547.11414.1 ID=mRNA_H-paniculata_contig4547.11414.1|Name=mRNA_H-paniculata_contig4547.11414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1986bp|location=Sequence derived from alignment at H-paniculata_contig4547:872..9394+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCGATCGCGAGGATGATGGTGCTGCTGTCTCGCAGAAGCAGCAGCA
GCCGCCACTGGACCAGCTCCAGCAATGTCTGATGGACCGCGCCCAGCCTA
TTGGTAAGAGGACGCACGCTGCCTTCTTCTTGAGGACGCTCGGTACACCA
GAGGCGGTGAGCGCCGTCTGCGAAGATGGGCGATCGCGAGGATGATGGTG
CTGCTGTCTCGCAGAAGCAGCAGCAGCCGCCACTGGACCAGCTCCAGCAA
TGTCTGATGGACCGCGCCCAGCCTATTGGTAAGAGGACGCACGCTGCCTT
CTTCTTGAGGACGCTCGGTACACCAGAGGCGGTGAGCGCCGTCTGCGAAG
CTTTACTTGTATCGGATGACTCGGCACTGCTACGTCATGAGCTCGCCTAC
ATTTTGGCTTTACTTGTATCGGATGACTCGGCACTGCTACGTCATGAGCT
CGCCTACATTTTGGGACAAATGCAGGATGCGAGCGCGTGCGTGACGCTGG
AAAAGGTACTGGAGGACACGTCTGACGACTGTATGGTCCGACATGAGGAC
AAATGCAGGATGCGAGCGCGTGCGTGACGCTGGAAAAGGTACTGGAGGAC
ACGTCTGACGACTGTATGGTCCGACATGAGGCTGCGGAAGCGTTGGGGGC
TATCGGCGATGAGTGCTCGGTGTCTGCGCTGGAGAAGTTCACCCAAGACC
CTGCGCCGGAAGTGTCTCAGGCTGCGGAAGCGTTGGGGGCTATCGGCGAT
GAGTGCTCGGTGTCTGCGCTGGAGAAGTTCACCCAAGACCCTGCGCCGGA
AGTGTCTCAGACGTGCCAGTTGTCTTTGGACTTGATGGCCTGGCGGCGCA
AGCAGGGAGTGGTGTCTGCTGGAACAGACTCCACGACCGGCAAGAAGGGG
TACGATGCCGGTAATCCTTATCTTTCGGTGGATCCTGCTCCCAGCTGCAA
TGCAGGAAACGAAGAGGAGGCAGCAGAAGGAGAAGCGTCGGGCGTTGTGG
CGACAGAGCAAATGGCGGAAAGACTTCGAGACCAAAGTCGAAGTCTGTTT
CAAAGATACAGACGTGCCAGTTGTCTTTGGACTTGATGGCCTGGCGGCGC
AAGCAGGGAGTGGTGTCTGCTGGAACAGACTCCACGACCGGCAAGAAGGG
GTACGATGCCGGTAATCCTTATCTTTCGGTGGATCCTGCTCCCAGCTGCA
ATGCAGGAAACGAAGAGGAGGCAGCAGAAGGAGAAGCGTCGGGCGTTGTG
GCGACAGAGCAAATGGCGGAAAGACTTCGAGACCAAAGTCGAAGTCTGTT
TCAAAGATACAGGGCCATGTTCTCGTTGAGGAACCAGGGGGGAGAAGCCG
CAGCTATGGCTCTTGCCTCGGCATTTGTCGACGAGGATAATGCGCTCTTC
AAGCACGAGGGCCATGTTCTCGTTGAGGAACCAGGGGGGAGAAGCCGCAG
CTATGGCTCTTGCCTCGGCATTTGTCGACGAGGATAATGCGCTCTTCAAG
CACGAGGTAGCGTATGTCCTGGGCCAGATGCAGCACCCCGCGACGGTACC
GGCCCTAGGCAGCATCTTGGCCGATCTCCGAGAGCATCAGATGGTGAGGC
ACGAGGCGGCAGAGGCCCTGGGGGCTATTGGAGGCGAGGAAGCGGAACGG
TTACTGAGAGATTTCAAGGATGATAAAGTAGATGCCGTTAAGGAGAGCTG
CGAGGTCGCCTTGGACACGATGGAATACTGGTCCTCGCGCGCCTAAGTAG
CGTATGTCCTGGGCCAGATGCAGCACCCCGCGACGGTACCGGCCCTAGGC
AGCATCTTGGCCGATCTCCGAGAGCATCAGATGGTGAGGCACGAGGCGGC
AGAGGCCCTGGGGGCTATTGGAGGCGAGGAAGCGGAACGGTTACTGAGAG
ATTTCAAGGATGATAAAGTAGATGCCGTTAAGGAGAGCTGCGAGGTCGCC
TTGGACACGATGGAATACTGGTCCTCGCGCGCCTAA
back to top