mRNA_H-paniculata_contig4531.11388.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4531.11388.1 vs. uniprot
Match: D7FNJ6_ECTSI (Lon protease homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNJ6_ECTSI) HSP 1 Score: 776 bits (2005), Expect = 2.870e-270 Identity = 429/569 (75.40%), Postives = 459/569 (80.67%), Query Frame = 1
Query: 16 QDHYGLDDIKERILEFIAVGKLRGGVHGKILCFVGPPGVGKTSIGRSIAKALDREFYRFSVGGLRDVAEIKGHRRTYVGSMPGKLIQCLKVTGTNNPVVLIDEIDKLGRGHDGDPASALLEVLDPSQNNAFLDNYLDVPVDLSNCLFICTANVLDTIPGPLKDRMEVIRLSGYDLPEKVAISEQYLIPKARVEHGMDKEDRLGHVEIDKEAIESLARWYAREAGVRNLAKLVDKIHRKLALEMVREDQELESAVAAEAPTTA-----------GPAAAPVTEKAEKATTASGSAERAAAAGSTAGK-QSDGEGSKEEPVRTPKAHSVTVDNLDKYVGKPTFTSDRLYE-RDTPPGVVMGLAWTAMGGSSLYIEAMAIGPPPATGXXXXXSSTGDRGEKAGDEGDAAAPTGGGAAGRLRTTGQLGDVMSESAQIAYSMARAYLRKVRPDRGLFFERVGEVHMHVPEGATPKDGPSAGVTMVTSLLSLATDTPVRKDLAMTGELSLTGKVLPVGGIKEKTIAARRSNIQCLVFPQGNKRDFDELPDYLKDGLEVHFASEYQDIFDVAFRKE 1683
+DHYGLDDIKERILEFIAVGKLRGGVHG+ILCFVGPPGVGKTSIG SIAKALDREFYRFSVGGLRDVAEIKGHRRTYVGSMPGKLIQCLKVTGTNNPVVLIDEIDKL R HDGDPASALLEVLDPSQN+AFLDNYLDVPVDLSNCLFICTANVLDTIPGPLKDRMEVIRLSGYDLPEKVAISEQYLIPKAR +HGMDK++RLGHVEI++EAIE+LARWYAREAGVRNL+KLVDKIHRKLALEMV EDQE + G AA V +A T G AAAG + + DG KE PKA VT +NLDKYVGKPTFTSDRLYE PPGVVMGLAWTAMGGSSLY+EAMAI PP T SS G+ RLRTTGQLGDVM+ESAQIAYS+AR L K+RP LFFE+ EVHMHVPEGATPKDGPSAGVTMVT+LLSLAT T VR+DLAMTGELSLTGKVLPVGGIKEKTIAARR+ +QCLVFPQGNKRDF+ELP+YL+DGLEVHFASEY D+F VAF K+
Sbjct: 514 EDHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKALDREFYRFSVGGLRDVAEIKGHRRTYVGSMPGKLIQCLKVTGTNNPVVLIDEIDKLARAHDGDPASALLEVLDPSQNSAFLDNYLDVPVDLSNCLFICTANVLDTIPGPLKDRMEVIRLSGYDLPEKVAISEQYLIPKARKDHGMDKDNRLGHVEIEREAIETLARWYAREAGVRNLSKLVDKIHRKLALEMVLEDQEATAXXXXXXXXXXXXXXXXXXXXXGEAAGLVVVEAGSPTVEEGVVADNAAAGVPEEEGERDGVAGKE-----PKAWVVTKENLDKYVGKPTFTSDRLYEGASAPPGVVMGLAWTAMGGSSLYVEAMAIRPP--TDASALPSS-----------GEXXXXXXXXXGARLRTTGQLGDVMNESAQIAYSVARECLGKLRPASALFFEKAAEVHMHVPEGATPKDGPSAGVTMVTALLSLATGTSVREDLAMTGELSLTGKVLPVGGIKEKTIAARRAGVQCLVFPQGNKRDFEELPEYLRDGLEVHFASEYGDVFGVAFGKK 1064
BLAST of mRNA_H-paniculata_contig4531.11388.1 vs. uniprot
Match: A0A835YRA9_9STRA (Lon protease homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRA9_9STRA) HSP 1 Score: 640 bits (1650), Expect = 4.420e-219 Identity = 362/565 (64.07%), Postives = 423/565 (74.87%), Query Frame = 1
Query: 16 QDHYGLDDIKERILEFIAVGKLRGGVHGKILCFVGPPGVGKTSIGRSIAKALDREFYRFSVGGLRDVAEIKGHRRTYVGSMPGKLIQCLKVTGTNNPVVLIDEIDKLGRGHDGDPASALLEVLDPSQNNAFLDNYLDVPVDLSNCLFICTANVLDTIPGPLKDRMEVIRLSGYDLPEKVAISEQYLIPKARVEHGMDKEDRLGH-VEIDKEAIESLARWYAREAGVRNLAKLVDKIHRKLALEMVREDQELESAVAAEAPTTAGPAAAPVTEKAEKATTASGSAERAAAAGSTAGKQSDGEGSKEEPVRTPKAHSVTVDNLDKYVGKPTFTSDRLYERDTPPGVVMGLAWTAMGGSSLYIEAMAIGPPPATGXXXXXSSTGDRGEKAGDEGDAAAP-TGGGA----------AGRLRTTGQLGDVMSESAQIAYSMARAYLRKVRPDRGLFFERVGEVHMHVPEGATPKDGPSAGVTMVTSLLSLATDTPVRKDLAMTGELSLTGKVLPVGGIKEKTIAARRSNIQCLVFPQGNKRDFDELPDYLKDGLEVHFASEYQDIFDVAF 1674
+DHYGLDDIK+RILEFIAVGKLRG VHGKILCF GPPGVGKTSIG+SIA+AL+REF+RFSVGGL D+AEIKGHRRTYVG+MPGKLIQ LK +GT NP++LIDE+DKLGRG+ GDPASALLEVLDPSQN+AF+D+YLDVPVDLS LFICTANV+DTIPGPL+DRME I LSGYDLPEKVAISEQYLIPKA E G+ + + + ++I EA+ESL RWY REAGVRNL K + K+ RKLALE+V+ E A AA+A + +G AAA TE AE A GK ++ ++ + + +VT DNL YVGKP FTSDRLYE PPGVVMGLAWTA+GG+SLYIE A+ P A SS + DAA+ T GG +G LR TGQLG VM ES+QIA+ AR L ++ P F ER EVHMHVPEGATPKDGPSAGVTM T+LLSLA PVR D+AMTGE+SLTGKVLPVGGIKEKTIAARR+ + CLVFP+GN+RD+DELPDYLKDGL+VHFA+ Y D++ VAF
Sbjct: 353 EDHYGLDDIKQRILEFIAVGKLRGTVHGKILCFAGPPGVGKTSIGQSIARALNREFFRFSVGGLTDIAEIKGHRRTYVGAMPGKLIQALKTSGTTNPLILIDEVDKLGRGYQGDPASALLEVLDPSQNSAFVDHYLDVPVDLSKALFICTANVMDTIPGPLRDRMETIWLSGYDLPEKVAISEQYLIPKALEEGGLAEGEGVPESLKITSEAVESLIRWYCREAGVRNLEKHIAKVVRKLALEVVKTR---ELAAAADATSDSGDAAAAATEAAEP------------LAQPVIGKTAE----EDAKLLERQDWAVTPDNLSDYVGKPVFTSDRLYEEALPPGVVMGLAWTALGGTSLYIETSAVLPRAAQ-----RSSNAPK--------DAASTDTAGGXXXXXXXXXXXSGALRVTGQLGGVMVESSQIAHHFARRELARLAPAND-FLERA-EVHMHVPEGATPKDGPSAGVTMATALLSLALARPVRADVAMTGEVSLTGKVLPVGGIKEKTIAARRAGVHCLVFPKGNRRDYDELPDYLKDGLDVHFAATYVDVYKVAF 883
BLAST of mRNA_H-paniculata_contig4531.11388.1 vs. uniprot
Match: A0A7S2RZQ8_9STRA (Lon protease homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZQ8_9STRA) HSP 1 Score: 589 bits (1518), Expect = 9.410e-199 Identity = 330/575 (57.39%), Postives = 392/575 (68.17%), Query Frame = 1
Query: 16 QDHYGLDDIKERILEFIAVGKLRGGVHGKILCFVGPPGVGKTSIGRSIAKALDREFYRFSVGGLRDVAEIKGHRRTYVGSMPGKLIQCLKVTGTNNPVVLIDEIDKLGRGHDGDPASALLEVLDPSQNNAFLDNYLDVPVDLSNCLFICTANVLDTIPGPLKDRMEVIRLSGYDLPEKVAISEQYLIPKARVEHGMDKEDRL---------------------GHVEIDKEAIESLARWYAREAGVRNLAKLVDKIHRKLALEMVREDQELESAVAAEAPTTAGPAAAPVTEKAEKATTASGSAERAAAAGSTAGKQSDGEGSKEEPVRTPKAHSVTVDNLDKYVGKPTFTSDRLYERDTPPGVVMGLAWTAMGGSSLYIEAMAIGPPPATGXXXXXSSTGDRGEKAGDEGDAAAPTGGGAAGRLRTTGQLGDVMSESAQIAYSMARAYLRKVRPDRGLF-FERVGEVHMHVPEGATPKDGPSAGVTMVTSLLSLATDTPVRKDLAMTGELSLTGKVLPVGGIKEKTIAARRSNIQCLVFPQGNKRDFDELPDYLKDGLEVHFASEYQDIFDVAF 1674
++HYGL+++K RILEFIAVGKL+G V GKI+C VGPPGVGKTSIG SIAKAL+REF+RFSVGGL DVAEIKGHRRTYVG+MPGK IQCLK TG++NP++LIDEIDKLGRG+ GDPASALLE+LDPSQN +F D+Y+D+P+DLS LFICTANV DTIPGPL DRME++RLSGYDLPEKV I++QYLIPKA + G+ D+ +E+D+ AI SL RWY REAGVR L++ +++I RKLA E+V+ + +G A + AG V+ NL YVGKP FTSDRLYE P GVVMGLAWTAMGGSSLYIE+++ P ++A E + GGG GRL TTGQLGDVM ES+ IA+S AR +LR P + F EVHMHVPEGATPKDGPSAGVTMVTSLLSLAT VRKD+AMTGE+SLTGKVL VGGIKEKTIAARR+ I CLV P NKRDF+ELP+YL+ GLE+HFA+EY D++ VAF
Sbjct: 418 EEHYGLEEVKNRILEFIAVGKLKGSVQGKIICLVGPPGVGKTSIGSSIAKALNREFFRFSVGGLTDVAEIKGHRRTYVGAMPGKPIQCLKATGSSNPLILIDEIDKLGRGYQGDPASALLELLDPSQNASFADHYMDIPLDLSKALFICTANVTDTIPGPLLDRMEMVRLSGYDLPEKVKIAQQYLIPKALRDSGLADADQSLTAAGGEDASSSGNKVSVPVPAGLEMDESAIYSLVRWYCREAGVRQLSQRIERICRKLAFEVVQHGE-------------------------------TGDANNGSKAG----------------------WKVSEANLADYVGKPVFTSDRLYEDQPPAGVVMGLAWTAMGGSSLYIESISTTPR----------------QEADPEMNGLQEKGGG--GRLVTTGQLGDVMRESSAIAHSFARTFLRHQVPGQAENRFLDTAEVHMHVPEGATPKDGPSAGVTMVTSLLSLATSRAVRKDVAMTGEVSLTGKVLAVGGIKEKTIAARRAGITCLVLPMANKRDFEELPEYLRKGLEIHFATEYADVYSVAF 921
BLAST of mRNA_H-paniculata_contig4531.11388.1 vs. uniprot
Match: A0A7S2U824_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U824_9STRA) HSP 1 Score: 572 bits (1474), Expect = 1.080e-197 Identity = 316/593 (53.29%), Postives = 390/593 (65.77%), Query Frame = 1
Query: 16 QDHYGLDDIKERILEFIAVGKLRGGVHGKILCFVGPPGVGKTSIGRSIAKALDREFYRFSVGGLRDVAEIKGHRRTYVGSMPGKLIQCLKVTGTNNPVVLIDEIDKLGRGHDGDPASALLEVLDPSQNNAFLDNYLDVPVDLSNCLFICTANVLDTIPGPLKDRMEVIRLSGYDLPEKVAISEQYLIPKARVEHGM--------------DKEDRLGHVEIDKE-------------------------AIESLARWYAREAGVRNLAKLVDKIHRKLALEMVREDQELESAVAAEAPTTAGPAAAPVTEKAEKATTASGSAERAAAAGSTAGKQSDGEGSKEEPVRTPKAHSVTVDNLDKYVGKPTFTSDRLYERDT-PPGVVMGLAWTAMGGSSLYIEAMAIGPPPATGXXXXXSSTGDRGEKAGDEGDAAAPTGGGAAGRLRTTGQLGDVMSESAQIAYSMARAYLRKVRPDRGLFFERVGEVHMHVPEGATPKDGPSAGVTMVTSLLSLATDTPVRKDLAMTGELSLTGKVLPVGGIKEKTIAARRSNIQCLVFPQGNKRDFDELPDYLKDGLEVHFASEYQDIFDVAF 1674
+DHYGLD++K+ IL+FIA+GKL+G V GKILC GPPG GKTSI +SIA+AL R+FYRFSVGGL DV+EIKGHRRTYVG+MPGKLIQCLK TGT NP+VLIDEIDKLG H GDPASALLEVLDPSQN++F D++LDVPVD+S LF+CTAN L IPGPL DRME+I+LSGYD+PEK+AI++QYL+PK+ E+G+ +E + VE++K AIESL RWY REAGVRNL K +DKI RKLAL++V E + A +T+K+ R +T +NL +YVGKP FTSDRLYE D P G+VMGLAWT+MGGS+LYIE I S G++ G G L+ TGQLGDVM ES QIAY++ARA + + F + +VHMHVPEGATPKDGPSAGVTM+T++LSLA D P+R DLAMTGE+SLTGKVL +GG+KEKT+AARR+ I+C++FP NKRDFDE+PDYLK+GLEVH+A +Y +++VAF
Sbjct: 17 KDHYGLDEVKDIILQFIAIGKLKGTVQGKILCLAGPPGTGKTSIAKSIAEALGRKFYRFSVGGLSDVSEIKGHRRTYVGAMPGKLIQCLKTTGTTNPLVLIDEIDKLGSDHRGDPASALLEVLDPSQNSSFRDHFLDVPVDVSKVLFMCTANDLSRIPGPLIDRMEIIQLSGYDVPEKIAIADQYLVPKSMRENGLMVEVKREEEEDTDNGEEKKDEEVELEKSKKVESFMSEYSLGEDVPKTLTIAQSAIESLVRWYCREAGVRNLYKHIDKITRKLALQIVAEKE-----------------GATLTDKS---------------------------------TRKSDTWEITDENLSEYVGKPIFTSDRLYETDPLPNGIVMGLAWTSMGGSALYIETQGI-----------KRSLDSEGKRRG-------------GGNLKVTGQLGDVMKESTQIAYTVARARMEDINSTNSFFDDF--DVHMHVPEGATPKDGPSAGVTMITAMLSLALDKPIRNDLAMTGEVSLTGKVLAIGGVKEKTMAARRAGIKCIIFPSANKRDFDEIPDYLKEGLEVHYAEDYSKVYEVAF 533
BLAST of mRNA_H-paniculata_contig4531.11388.1 vs. uniprot
Match: A0A7S4RG39_9STRA (Lon protease homolog, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RG39_9STRA) HSP 1 Score: 587 bits (1512), Expect = 1.340e-196 Identity = 328/588 (55.78%), Postives = 398/588 (67.69%), Query Frame = 1
Query: 16 QDHYGLDDIKERILEFIAVGKLRGGVHGKILCFVGPPGVGKTSIGRSIAKALDREFYRFSVGGLRDVAEIKGHRRTYVGSMPGKLIQCLKVTGTNNPVVLIDEIDKLGRGHDGDPASALLEVLDPSQNNAFLDNYLDVPVDLSNCLFICTANVLDTIPGPLKDRMEVIRLSGYDLPEKVAISEQYLIPKARVEHGM----DKEDRLGHVE------------------------------IDKEAIESLARWYAREAGVRNLAKLVDKIHRKLALEMVREDQELESAVAAEAPTTAGPAAAPVTEKAEKATTASGSAERAAAAGSTAGKQSDGEGSKEEPVRTPKAHSVTVDNLDKYVGKPTFTSDRLYERDT-PPGVVMGLAWTAMGGSSLYIEAMAIGPPPATGXXXXXSSTGDRGEKAGDEGDAAAPTGGGAAGRLRTTGQLGDVMSESAQIAYSMARAYLRKVRPDRGLFFERVGEVHMHVPEGATPKDGPSAGVTMVTSLLSLATDTPVRKDLAMTGELSLTGKVLPVGGIKEKTIAARRSNIQCLVFPQGNKRDFDELPDYLKDGLEVHFASEYQDIFDVAF 1674
+DHYGLD++K+ IL+FIAVGKL+G V GKILC GPPG GKTSIG+S+A AL R+FYRFSVGGL DV+EIKGHRRTYVG+MPGKLIQCLK GT+NP+VLIDEIDKLGR H GDP+SALLEVLDPSQN+ F D++LDVPVDLS LF+CTAN L+ IPGPL DRMEVIRLSGYD+PEK+AI+EQYL+PKA E+G+ +K VE I+K A+ESL RWY REAGVRNL+K +DKI RKLAL++V ED+ E +TEK+ R SVT NL++YVGKP FTSDR+YE+D P G+VMGLAWT+MGGS+LYIE +I K G + D G G L+ TGQLG VM ES QI+Y++ARA L ++ ++ +++ ++HMHVPEGATPKDGPSAG+TMVT++LSLA D P+R DLAMTGE+SLTGKVLPVGGIKEKT+AARR+ I+CL+FP NKRD+DELPDYLKDGLEVHFA +Y + +VAF
Sbjct: 520 RDHYGLDEVKDTILQFIAVGKLKGTVQGKILCLAGPPGTGKTSIGKSVADALGRKFYRFSVGGLSDVSEIKGHRRTYVGAMPGKLIQCLKSIGTSNPLVLIDEIDKLGRDHRGDPSSALLEVLDPSQNSMFRDHFLDVPVDLSQVLFMCTANDLERIPGPLLDRMEVIRLSGYDVPEKLAIAEQYLVPKAMRENGILSKQEKXXXXXXVEDSDIKQEENETSKHDSDLYTRTKGVPESLSIEKSALESLVRWYCREAGVRNLSKHIDKIVRKLALQIVAEDEGAE-----------------LTEKS---------------------------------ARKSNTWSVTDSNLNEYVGKPIFTSDRMYEKDPLPHGIVMGLAWTSMGGSALYIETQSI--------------------KRGVDSDGKRRGG----GMLKVTGQLGKVMEESTQISYTVARARLAEI-DEKNTYYDD-NDIHMHVPEGATPKDGPSAGITMVTAMLSLALDKPIRNDLAMTGEISLTGKVLPVGGIKEKTMAARRAGIKCLIFPAANKRDYDELPDYLKDGLEVHFADDYSTVREVAF 1031
BLAST of mRNA_H-paniculata_contig4531.11388.1 vs. uniprot
Match: LONM_PHATC (Lon protease homolog, mitochondrial n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=LONM_PHATC) HSP 1 Score: 579 bits (1493), Expect = 1.180e-195 Identity = 321/561 (57.22%), Postives = 384/561 (68.45%), Query Frame = 1
Query: 7 TRAQDHYGLDDIKERILEFIAVGKLRGGVHGKILCFVGPPGVGKTSIGRSIAKALDREFYRFSVGGLRDVAEIKGHRRTYVGSMPGKLIQCLKVTGTNNPVVLIDEIDKLGRGHDGDPASALLEVLDPSQNNAFLDNYLDVPVDLSNCLFICTANVLDTIPGPLKDRMEVIRLSGYDLPEKVAISEQYLIPKARVEHGMDKEDRLGHVEIDKEAIESLARWYAREAGVRNLAKLVDKIHRKLALEMVREDQELESAVAAEAPTTAGPAAAPVTEKAEKATTASGSAERAAAAGSTAGKQSDGEGSKEEPVRTPKAHSVTVDNLDKYVGKPTFTSDRLYERDT-PPGVVMGLAWTAMGGSSLYIEAMAIGPPPATGXXXXXSSTGDRGEKAGDEGDAAAPTGGGAAGRLRTTGQLGDVMSESAQIAYSMARAYLRKVRPDRGLFFERVGEVHMHVPEGATPKDGPSAGVTMVTSLLSLATDTPVRKDLAMTGELSLTGKVLPVGGIKEKTIAARRSNIQCLVFPQGNKRDFDELPDYLKDGLEVHFASEYQDIFDVAFRKED 1686
T +DHYGLDD+K+ ILEFIA+GKLRG V GKILC GPPG GKTSI +S+A AL R+F+RFSVGGL DV+EIKGHRRTY+G+MPGKLIQCLK TGT NPVVLIDEIDKLG G GDPASALLEVLDP QN+ F D +LDVPVD+S LFICTAN L+ IPGPL DRMEVIRLSGYDLPEKVAI+EQYL+PK+ + G+ + ID A+ SLARWYAREAGVRNLAK +D+I RKLAL++V E + A +T+K+ R +T DNL +YVGKP FTSDRLYE P G+VMGLA+T+MGGS+LYIE +I RG D+ T GG G L+ TGQLGDVM ES QIA ++ARA L ++P+ F + ++HMHVPEGATPKDGPSAGVTMVTS+LSLA D P+R DLAMTGE+SLTGKVL VGGIKEK + ARR+ I+C++ P NKRD+DE+PDYLK+ LEVH+A + +++VAF D
Sbjct: 398 TLDRDHYGLDDVKDTILEFIAIGKLRGSVQGKILCLSGPPGTGKTSIAKSVADALGRQFFRFSVGGLSDVSEIKGHRRTYIGAMPGKLIQCLKATGTTNPVVLIDEIDKLGTGFRGDPASALLEVLDPGQNSTFRDYFLDVPVDISKVLFICTANELERIPGPLLDRMEVIRLSGYDLPEKVAIAEQYLVPKSMRDSGLLGVPETLKLTID--AVRSLARWYAREAGVRNLAKYIDRITRKLALQVVAESE-----------------GATLTDKSS---------------------------------RKSNTWEITEDNLHEYVGKPVFTSDRLYEDGPLPHGIVMGLAYTSMGGSALYIETQSI----------------RRGL------DSEGKTRGG--GTLKVTGQLGDVMKESTQIASTVARARLSDIKPESNFF--DINDIHMHVPEGATPKDGPSAGVTMVTSMLSLALDRPIRNDLAMTGEVSLTGKVLAVGGIKEKIMGARRAGIKCVILPAANKRDYDEIPDYLKEDLEVHYADTFDKVYEVAFSSVD 880
BLAST of mRNA_H-paniculata_contig4531.11388.1 vs. uniprot
Match: A0A4D9CTF9_9STRA (Lon protease homolog, mitochondrial n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTF9_9STRA) HSP 1 Score: 581 bits (1498), Expect = 6.640e-195 Identity = 332/594 (55.89%), Postives = 397/594 (66.84%), Query Frame = 1
Query: 16 QDHYGLDDIKERILEFIAVGKLRGGVHGKILCFVGPPGVGKTSIGRSIAKALDREFYRFSVGGLRDVAEIKGHRRTYVGSMPGKLIQCLKVTGTNNPVVLIDEIDKLGRGHDGDPASALLEVLDPSQNNAFLDNYLDVPVDLSNCLFICTANVLDTIPGPLKDRMEVIRLSGYDLPEKVAISEQYLIPKARVEHGMD------KED------RLGHVE--------------------------IDKEAIESLARWYAREAGVRNLAKLVDKIHRKLALEMVREDQELESAVAAEAPTTAGPAAAPVTEKAEKATTASGSAERAAAAGSTAGKQSDGEGSKEEPVRTPKAHSVTVDNLDKYVGKPTFTSDRLYERDTPPGVVMGLAWTAMGGSSLYIEAMAIGPPPATGXXXXXSSTGDRGEKAGDEGDAAAPTGGGAAGRLRTTGQLGDVMSESAQIAYSMARAYLRKVRPDRGLFFERVGEVHMHVPEGATPKDGPSAGVTMVTSLLSLATDTPVRKDLAMTGELSLTGKVLPVGGIKEKTIAARRSNIQCLVFPQGNKRDFDELPDYLKDGLEVHFASEYQDIFDVAFRKE 1683
+DHYGL DIK RILEF+AV KL+G GKILCFVGPPGVGKTSIG+SIA+AL R F+RFSVGGL DVAEIKGHRRTYVG+MPGK+IQCLK T+NP+VLIDE+DKLGR GDPASALLE+LDP+QN +F+D+YLDVPVD+S LFICTAN++DTIPGPL DRMEVIRLSGYDLPEKVAI++QYLIPKAR E G+ +E+ + GHVE I + AI+SL RWY REAGVRNL K ++KI RKLA E+V++ + +E A E GP G + G+G EE V T + SVT NL+KYVGK FTSDRLYE PPGVVMGL+WTAMGG+SLYIE ++ + G G L +TGQ+G VM ES +IA++ AR L + D F ++HMHVPEG+ PK+GPSAGVTM T+LLSLA + VR D+AMTGE+SLTGKVLPVGGIKEKTIAARRS + CL+FP GNK+DF+ELP YLK+GLEVHFA+ Y D+FD AF +E
Sbjct: 459 EDHYGLQDIKNRILEFMAVSKLKGSTQGKILCFVGPPGVGKTSIGKSIARALGRAFHRFSVGGLYDVAEIKGHRRTYVGAMPGKIIQCLKTVQTSNPLVLIDEVDKLGRDR-GDPASALLELLDPNQNESFIDHYLDVPVDVSKVLFICTANLIDTIPGPLLDRMEVIRLSGYDLPEKVAIAQQYLIPKAREEAGIPMPSIEGREEAGLEGGKEGHVETKEGEGGEEAMEKKPHSAMDIPENVRITEGAIDSLIRWYCREAGVRNLEKHIEKICRKLAHEVVQKAEGVEPKGADEL----GPG----------------------------GGEESGQG--EEDVATREDWSVTEKNLEKYVGKRVFTSDRLYEGGAPPGVVMGLSWTAMGGASLYIEVQSVRHKSSGG------------------------------GTLTSTGQMGSVMEESTRIAHTFARRKLEDFQADNAFF--DTHDLHMHVPEGSIPKEGPSAGVTMTTALLSLALNRSVRADVAMTGEISLTGKVLPVGGIKEKTIAARRSGVTCLIFPHGNKKDFEELPGYLKEGLEVHFATVYNDVFDCAFAEE 985
BLAST of mRNA_H-paniculata_contig4531.11388.1 vs. uniprot
Match: B8C600_THAPS (Lon protease homolog (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C600_THAPS) HSP 1 Score: 576 bits (1484), Expect = 6.810e-195 Identity = 310/557 (55.66%), Postives = 389/557 (69.84%), Query Frame = 1
Query: 16 QDHYGLDDIKERILEFIAVGKLRGGVHGKILCFVGPPGVGKTSIGRSIAKALDREFYRFSVGGLRDVAEIKGHRRTYVGSMPGKLIQCLKVTGTNNPVVLIDEIDKLGRGHDGDPASALLEVLDPSQNNAFLDNYLDVPVDLSNCLFICTANVLDTIPGPLKDRMEVIRLSGYDLPEKVAISEQYLIPKARVEHGMDKEDRLGHVEIDKE-AIESLARWYAREAGVRNLAKLVDKIHRKLALEMVREDQELESAVAAEAPTTAGPAAAPVTEKAEKATTASGSAERAAAAGSTAGKQSDGEGSKEEPVRTPKAHSVTVDNLDKYVGKPTFTSDRLYERDT-PPGVVMGLAWTAMGGSSLYIEAMAIGPPPATGXXXXXSSTGDRGEKAGDEGDAAAPTGGGAAGRLRTTGQLGDVMSESAQIAYSMARAYLRKVRPDRGLFFERVGEVHMHVPEGATPKDGPSAGVTMVTSLLSLATDTPVRKDLAMTGELSLTGKVLPVGGIKEKTIAARRSNIQCLVFPQGNKRDFDELPDYLKDGLEVHFASEYQDIFDVAFRK 1680
+DHYG+D++KE IL+FIAVGKL+G V GKILC GPPG GKTSI S+A+AL R+F+RFSVGG+ DV+EIKGHRRTYVG+MPGK+IQCLK TG++NP+VLIDEIDKLGR GDPASALLEVLDPSQN+ F D+++D PVD+S LF+CTAN LD IPGPL DRMEVIRLSGYD+PEK+ I++QYL+PK+ V G+ ++ +K+ A+ESL RWY REAGVRNLAK +DKI R L+L++V E++ A +T+K+ R V+ DNL +YVGKP FTSDRLY+ D P G+VMGLAWT+MGGS+LYIE I T G++ G G L+TTGQ+GDVM ES QIAY++ARA + ++ PD F + ++HMHVPEGATPKDGPSAGVTMVT++LSLA D P++ DLAMTGE+SLTGKVL VGGIKEKT+AARR+ I ++ P+ +RDF+ELPDYLK+GL+VHFA+EY D++DVAF K
Sbjct: 355 RDHYGMDEVKETILQFIAVGKLKGSVQGKILCLAGPPGTGKTSIAESVAEALGRKFFRFSVGGMSDVSEIKGHRRTYVGAMPGKIIQCLKSTGSSNPLVLIDEIDKLGRDFRGDPASALLEVLDPSQNSTFRDHFIDAPVDISKVLFMCTANELDAIPGPLLDRMEVIRLSGYDVPEKLEIAQQYLVPKSMVNSGLMVKEIHEDDSTEKDNALESLVRWYCREAGVRNLAKKIDKITRLLSLQVVAEEE-----------------GAMLTDKS---------------------------------TRKSDTWEVSSDNLHEYVGKPIFTSDRLYDTDPLPHGIVMGLAWTSMGGSALYIETQGIKRGLDT-----------EGKRRG-------------GGTLKTTGQMGDVMKESTQIAYTVARARMAEIAPDNSFFDDT--DIHMHVPEGATPKDGPSAGVTMVTAMLSLALDRPIKSDLAMTGEISLTGKVLAVGGIKEKTMAARRAGISTIILPEDCRRDFEELPDYLKEGLDVHFATEYSDVYDVAFGK 835
BLAST of mRNA_H-paniculata_contig4531.11388.1 vs. uniprot
Match: A0A7S1CRC2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CRC2_9STRA) HSP 1 Score: 563 bits (1450), Expect = 8.490e-192 Identity = 313/591 (52.96%), Postives = 394/591 (66.67%), Query Frame = 1
Query: 16 QDHYGLDDIKERILEFIAVGKLRGGVHGKILCFVGPPGVGKTSIGRSIAKALDREFYRFSVGGLRDVAEIKGHRRTYVGSMPGKLIQCLKVTGTNNPVVLIDEIDKLGRGHDGDPASALLEVLDPSQNNAFLDNYLDVPVDLSNCLFICTANVLDTIPGPLKDRMEVIRLSGYDLPEKVAISEQYLIPKARVEHGM-------DKEDRLGH------------------------------VEIDKEAIESLARWYAREAGVRNLAKLVDKIHRKLALEMVREDQELESAVAAEAPTTAGPAAAPVTEKAEKATTASGSAERAAAAGSTAGKQSDGEGSKEEPVRTPKAHSVTVDNLDKYVGKPTFTSDRLYERDT-PPGVVMGLAWTAMGGSSLYIEAMAIGPPPATGXXXXXSSTGDRGEKAGDEGDAAAPTGGGAAGRLRTTGQLGDVMSESAQIAYSMARAYLRKVRPDRGLFFERVGEVHMHVPEGATPKDGPSAGVTMVTSLLSLATDTPVRKDLAMTGELSLTGKVLPVGGIKEKTIAARRSNIQCLVFPQGNKRDFDELPDYLKDGLEVHFASEYQDIFDVAF 1674
+DHYG+D++KE IL+FIAVGKL+G V GKILC GPPGVGKTSI S+A AL R+FYRFSVGG+ DV+EIKGHRRTYVG+MPGK+IQCLK TG++NP+VLIDEIDKLGR H GDPASALLEVLDPSQN+ F D+++D PVD+S CLF+CTAN L IPGPL DRMEVI+LSGYD+P+K+ I+E+YL+PK+ V G+ K+D G + I++ A+ESL RWY REAGVRNL K +DKI L+L++V E++ E +T+K+ + +SD + +V+ DNL +YVGKP FTSDRLYE+D P G+VMGLAWT+MGGS+LYIE I S G R GG G L+TTGQ+GDVM ES QIAY++ARA L + P F + ++HMHVPEGATPKDGPSAGVTMVT++LSLATD P++ DLAMTGE+SLTGKVL VGGIKEKT+AARR+ I+ ++ P+ +RD+DELP+YLKDGL++ FAS+Y ++DVAF
Sbjct: 173 RDHYGMDEVKETILQFIAVGKLKGSVQGKILCLAGPPGVGKTSIAESVAAALGRKFYRFSVGGMSDVSEIKGHRRTYVGAMPGKIIQCLKSTGSSNPLVLIDEIDKLGRDHRGDPASALLEVLDPSQNHTFRDHFIDAPVDISKCLFMCTANDLGRIPGPLLDRMEVIQLSGYDVPDKLEIAEKYLVPKSMVNSGLMIDESEAAKDDESGXXXXXXXXXXXXXEAEERLPTYQLAERVPDTLSIERSALESLVRWYCREAGVRNLQKKIDKITGLLSLQVVAEEEGAE-----------------LTDKSSR--------------------KSD-------------SWTVSSDNLHEYVGKPIFTSDRLYEKDPLPHGIVMGLAWTSMGGSALYIETQGI--------TRGLDSDGKR-------------RGG---GTLKTTGQMGDVMKESTQIAYTVARARLADIDPTNSYFDDT--DIHMHVPEGATPKDGPSAGVTMVTAMLSLATDKPIKSDLAMTGEVSLTGKVLAVGGIKEKTMAARRAGIKTIILPEDCRRDWDELPEYLKDGLDIQFASDYSSVYDVAF 687
BLAST of mRNA_H-paniculata_contig4531.11388.1 vs. uniprot
Match: A0A329SV12_9STRA (Lon protease homolog, mitochondrial n=19 Tax=Phytophthora TaxID=4783 RepID=A0A329SV12_9STRA) HSP 1 Score: 568 bits (1465), Expect = 4.970e-191 Identity = 317/560 (56.61%), Postives = 394/560 (70.36%), Query Frame = 1
Query: 16 QDHYGLDDIKERILEFIAVGKLRGGVHGKILCFVGPPGVGKTSIGRSIAKALDREFYRFSVGGLRDVAEIKGHRRTYVGSMPGKLIQCLKVTGTNNPVVLIDEIDKLGRGHDGDPASALLEVLDPSQNNAFLDNYLDVPVDLSNCLFICTANVLDTIPGPLKDRMEVIRLSGYDLPEKVAISEQYLIPKARVEHGMDKE----DRLGHVEIDKEAIESLARWYAREAGVRNLAKLVDKIHRKLALEMVREDQELESAVAAEAPTTAGPAAAPVTEKAEKATTASGSAERAAAAGSTAGKQSDGEGSKEEPVRTPKAHSVTVDNLDKYVGKPTFTSDRLYERDTPPGVVMGLAWTAMGGSSLYIEAMAIGPPPATGXXXXXSSTGDRGEKAGDEGDAAAPTGGGAAGRLRTTGQLGDVMSESAQIAYSMARAYLRKVRPDRGLFFERVGEVHMHVPEGATPKDGPSAGVTMVTSLLSLATDTPVRKDLAMTGELSLTGKVLPVGGIKEKTIAARRSNIQCLVFPQGNKRDFDELPDYLKDGLEVHFASEYQDIFDVAFRKE 1683
+DHYGL DIKERILEFIAV KL+G V GKI+CFVGPPGVGKTSIG+SIA++L+REFYRFSVGGL DVAEIKGHRRTYVG+MPGK+IQCLK T ++NP++LIDEIDKLGRG+ GDPASALLE+LDPSQN+ F+D+Y+DVPVDLS LFICTANV DTIPGPL DRMEV+RLSGYD PEK+AI+++YL+PKA + G+ K + LG + EAI +L + Y RE+GVRNL K V+K+ RK+ALE+V +++E A A EA AG+ + E ++E+ R ++ + L KYVGKP FTSDR++++ P GVVMGLAWTAMGG+SLYIE + + GDR L TTGQ+G VM ES +IA++ AR+ + + P+ F E EVH+HVPEGATPKDGPSAG TMVT+LLSLA D V+ DLAMTGELSL GKVLPVGGIKEKTIAA+R+ ++ L+ P GNKRDFDEL +YL++ L+VHFA Y D++ VAF +E
Sbjct: 431 EDHYGLKDIKERILEFIAVSKLKGDVQGKIICFVGPPGVGKTSIGKSIARSLNREFYRFSVGGLSDVAEIKGHRRTYVGAMPGKIIQCLKSTQSSNPLILIDEIDKLGRGYQGDPASALLELLDPSQNSGFVDHYMDVPVDLSRVLFICTANVTDTIPGPLLDRMEVLRLSGYDSPEKLAIAKEYLVPKALEKTGLQKSKTTPESLG---LTDEAILTLVKQYCRESGVRNLEKHVEKVFRKVALEVV---EDIERAKADEA--------------------------------QEAGESTAAEETEEDKDR----FLISPEKLSKYVGKPIFTSDRMFDKQFP-GVVMGLAWTAMGGASLYIETTKV------------YTKGDR-------------------SGLITTGQMGSVMEESTKIAHTYARSKMHAIDPENKFFEEN--EVHLHVPEGATPKDGPSAGCTMVTALLSLAMDKTVKPDLAMTGELSLVGKVLPVGGIKEKTIAAKRAGVKTLILPLGNKRDFDELEEYLREDLDVHFADYYDDVYKVAFEQE 914 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4531.11388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4531.11388.1 >prot_H-paniculata_contig4531.11388.1 ID=prot_H-paniculata_contig4531.11388.1|Name=mRNA_H-paniculata_contig4531.11388.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=564bp MCTRAQDHYGLDDIKERILEFIAVGKLRGGVHGKILCFVGPPGVGKTSIGback to top mRNA from alignment at H-paniculata_contig4531:366..10184+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4531.11388.1 ID=mRNA_H-paniculata_contig4531.11388.1|Name=mRNA_H-paniculata_contig4531.11388.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9819bp|location=Sequence derived from alignment at H-paniculata_contig4531:366..10184+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4531:366..10184+ >mRNA_H-paniculata_contig4531.11388.1 ID=mRNA_H-paniculata_contig4531.11388.1|Name=mRNA_H-paniculata_contig4531.11388.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3384bp|location=Sequence derived from alignment at H-paniculata_contig4531:366..10184+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |