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Homology
BLAST of mRNA_H-paniculata_contig4511.11351.1 vs. uniprot
Match: D7FJI8_ECTSI (TCTP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJI8_ECTSI) HSP 1 Score: 291 bits (744), Expect = 4.220e-92 Identity = 141/177 (79.66%), Postives = 157/177 (88.70%), Query Frame = 2
Query: 134 MLVYKDLISGDEMMTDAFPRLPVTDGDGNVIEGMFEVQSGTTVKGADSVDIGCGDAFGGGDEAVDDSAEKVNNVIDPFKYTEVPFGNKTEFRDYLKDYVRKVRQKLKENGVEQPKIKEFMAQAPAIVKFLLSKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYIAMALEEEKF 664
M+VYKDLISGDEMMTDAFP+ PV DG +EGMFEV+S T VKG+D+VDIGCG+AFGG +E VDDS EKVNNVIDPFKYTEVPFG+KTE +DYLK+YVR VR KLKE G QP+IKEFMAQAP +VKFLLSKFADMQTFAGESMTAEGGMAFGYYK+GAHNPTFAYI+ A+E EKF
Sbjct: 1 MIVYKDLISGDEMMTDAFPQNPVVGNDGETVEGMFEVESSTAVKGSDNVDIGCGNAFGGEEEVVDDSVEKVNNVIDPFKYTEVPFGSKTELKDYLKEYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLSKFADMQTFAGESMTAEGGMAFGYYKDGAHNPTFAYISKAMEAEKF 177
BLAST of mRNA_H-paniculata_contig4511.11351.1 vs. uniprot
Match: A0A835YS00_9STRA (Mss4-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS00_9STRA) HSP 1 Score: 218 bits (556), Expect = 3.280e-64 Identity = 108/179 (60.34%), Postives = 136/179 (75.98%), Query Frame = 2
Query: 134 MLVYKDLISGDEMMTDAFPRLPVTDGDGNVIEGMFEVQSGTTVKGADSVDIGCGDAFGGG--DEAVDDSAEKVNNVIDPFKYTEVPFGNKTEFRDYLKDYVRKVRQKLKENGVEQPKIKEFMAQAPAIVKFLLSKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYIAMALEEEKF 664
M+VY D+++GDEMMTDAF +LPV D +GN +EG+FEV+S VKG+ VDIGCG++FGGG DEAVDD+ EKVNNVID F ++E PFG+KTEF++YLK+YV K+R KE G QP+IK FMA AP IVKFLLSK+ D+Q + G S +G M+F YYKEGA P F +I L+ EKF
Sbjct: 1 MIVYTDMVTGDEMMTDAFKKLPVLDDEGNPVEGLFEVESQVIVKGSTEVDIGCGNSFGGGGDDEAVDDAVEKVNNVIDSFNFSECPFGSKTEFKEYLKEYVVKLRGMFKEAGKPQPEIKAFMATAPGIVKFLLSKYNDLQFYVGASYDPQGAMSFSYYKEGATTPNFMFIEGGLKVEKF 179
BLAST of mRNA_H-paniculata_contig4511.11351.1 vs. uniprot
Match: H6WBA0_VAULI (TCTP domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA0_VAULI) HSP 1 Score: 200 bits (509), Expect = 6.990e-57 Identity = 101/178 (56.74%), Postives = 127/178 (71.35%), Query Frame = 2
Query: 134 MLVYKDLISGDEMMTDAFPRLPVTDGDGNVIEGMFEVQSGTTVKGADSVDIGCGDAFGGG--DEAVDDSAEKVNNVIDPFKYTEVPFGNKTEFRDYLKDYVRKVRQKLKENGVEQPKIKEFMAQAPAIVKFLLSKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYIAMALEEEK 661
M+VY DLISGDEMMTDAF PV + G +EG+FEV+S VKG D+VDIGCG++FGGG DE VDDS EKVNN+I F +E PFG++ EF++YLK+YV+KVR LK++G QP+IK FMA AP +VKFLL + + Q + G S G MAF YYKEGA P+F +I L+ K
Sbjct: 1 MIVYADLISGDEMMTDAFKIKPVMNSKGEKVEGLFEVESEIIVKGGDNVDIGCGNSFGGGGADEIVDDSVEKVNNIISSFNLSECPFGSRNEFKEYLKEYVKKVRTALKDSGTPQPQIKAFMAIAPDMVKFLLENYKEYQFYTGSSYDPSGAMAFAYYKEGALTPSFVFIEAGLKVTK 178
BLAST of mRNA_H-paniculata_contig4511.11351.1 vs. uniprot
Match: A0A225VK44_9STRA (TCTP domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225VK44_9STRA) HSP 1 Score: 173 bits (439), Expect = 3.300e-47 Identity = 90/180 (50.00%), Postives = 119/180 (66.11%), Query Frame = 2
Query: 134 MLVYKDLISGDEMMTDAFPRLPVTDGDGNVIEGMFEVQSGTTVKGADSVDIGCGDAFGGGDEAVDDSAEKVNNVIDP---FKYTEVPFGNKTEFRDYLKDYVRKVRQKLKENGVEQPKIKEFMAQAPAIVKFLLSKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYIAMALEEEKF 664
MLV++D+ + DE+M+D+F +P D +GN + GMF+V+S T KGAD+VDIGCGDAFGG +EAVDDS E VNNVID F Y E F K E + YLK + RKV + LK + + +F + A IVKFL+S F ++Q + +S +E GMA+ YY EGA PTF YI L+E KF
Sbjct: 1 MLVWQDIFTEDEVMSDSFKVVPCKDLEGNEVSGMFQVESKTVAKGADNVDIGCGDAFGGEEEAVDDSVETVNNVIDESVGFGYNETGFDTKAELKTYLKSFFRKVMKNLKSSDASDETLAQFKSDAQEIVKFLVSMFKELQFYMFKSFDSEAGMAYAYYPEGAIAPTFCYIKWGLKEVKF 180
BLAST of mRNA_H-paniculata_contig4511.11351.1 vs. uniprot
Match: A0A4V8H021_9STRA (NoTCTP n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4V8H021_9STRA) HSP 1 Score: 172 bits (437), Expect = 8.190e-47 Identity = 89/181 (49.17%), Postives = 119/181 (65.75%), Query Frame = 2
Query: 134 MLVYKDLISGDEMMTDAFPRLPVTDGDGNVIEGMFEVQSGTTVKGADSVDIGCGDAFGGG--DEAVDDSAEKVNNVIDP--FKYTEVPFGNKTEFRDYLKDYVRKVRQKLKENGVEQPKIKEFMAQAPAIVKFLLSKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYIAMALEEEKF 664
M+VYKD+ISGDE+++DA PV +G G + G+FEV S G +DIGCG+AFGG DE DD+ +K NNV P F YT +PF +K EF+ ++KDYVR VRQ LK +GV IK+FM +AP VK+L+ K+ D++ F +SM + G+ F YYKEGAH PTF Y+ + KF
Sbjct: 1 MIVYKDVISGDEVVSDALKITPVMEG-GEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPSSFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVKF 180
BLAST of mRNA_H-paniculata_contig4511.11351.1 vs. uniprot
Match: A0A484DX33_BRELC (TCTP domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DX33_BRELC) HSP 1 Score: 169 bits (429), Expect = 8.910e-46 Identity = 87/180 (48.33%), Postives = 117/180 (65.00%), Query Frame = 2
Query: 134 MLVYKDLISGDEMMTDAFPRLPVTDGDGNVIEGMFEVQSGTTVKGADSVDIGCGDAFGGGDEAVDDSAEKVNNVIDP---FKYTEVPFGNKTEFRDYLKDYVRKVRQKLKENGVEQPKIKEFMAQAPAIVKFLLSKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYIAMALEEEKF 664
MLV++D+ + DE+M+D+ +P D +GN I GMF+V+S KGAD+VDIGCGDAFGG D VDDS E VNN+ID F Y E F + E + YLK Y RK+ + LK GV++ + F AP IVK+L+S F ++Q + +S +E G+A+ YY EGA PTF YI L+E KF
Sbjct: 1 MLVWQDVFTEDEVMSDSNKVIPCKDMEGNEISGMFQVESKMVAKGADNVDIGCGDAFGGDDAQVDDSVETVNNIIDDSIGFGYIETGFETRAELKTYLKSYFRKIMKHLKSTGVDEETLNRFKTDAPEIVKYLVSMFKELQFYMFKSCDSEAGLAYAYYPEGALAPTFCYIKWGLKEVKF 180
BLAST of mRNA_H-paniculata_contig4511.11351.1 vs. uniprot
Match: M4C5S4_HYAAE (TCTP domain-containing protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=M4C5S4_HYAAE) HSP 1 Score: 166 bits (419), Expect = 2.390e-44 Identity = 88/180 (48.89%), Postives = 114/180 (63.33%), Query Frame = 2
Query: 134 MLVYKDLISGDEMMTDAFPRLPVTDGDGNVIEGMFEVQSGTTVKGADSVDIGCGDAFGGGDEAVDDSAEKVNNVIDP---FKYTEVPFGNKTEFRDYLKDYVRKVRQKLKENGVEQPKIKEFMAQAPAIVKFLLSKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYIAMALEEEKF 664
MLV++D+ + DE+M+D+ P D +GN + GMF+V+S T KGAD+VDIGCGDAFGG DE VDDS E VNNVID F Y E F K E + YLK Y RK + LK + +F + A IVKFL+S F ++Q + +S +E G+A+ YY EGA PTF YI L+E KF
Sbjct: 1 MLVWQDVFTEDEVMSDSHKVSPCKDMEGNAVPGMFQVESKTVAKGADNVDIGCGDAFGGDDEQVDDSVETVNNVIDDSIGFGYIETGFDTKAELKTYLKSYFRKTMKHLKATEAGDEALAQFKSDAQEIVKFLVSMFKELQYYMFKSCDSEAGLAYAYYPEGAVAPTFCYIKWGLKEVKF 180
BLAST of mRNA_H-paniculata_contig4511.11351.1 vs. uniprot
Match: A0A067BU98_SAPPC (TCTP domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BU98_SAPPC) HSP 1 Score: 164 bits (414), Expect = 1.230e-43 Identity = 83/180 (46.11%), Postives = 115/180 (63.89%), Query Frame = 2
Query: 134 MLVYKDLISGDEMMTDAFPRLPVTDGDGNVIEGMFEVQSGTTVKGADSVDIGCGDAFGGGDEAVDDSAEKVNNVIDP---FKYTEVPFGNKTEFRDYLKDYVRKVRQKLKENGVEQPKIKEFMAQAPAIVKFLLSKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYIAMALEEEKF 664
MLV++D+ + DE+++D+ + D +GNV+ GM V S T KG ++D+GCGDAFGGGD+ VDDS E VNN+ID F YTE F +K + + YLK Y RK+ + LK G K+ EF + A IVK+L S+F+++Q + +M E GMA+ YY EGA P F YI L+E KF
Sbjct: 1 MLVWQDIFTEDEVVSDSHKVVDAKDAEGNVVPGMLMVTSKTVTKGGLNIDVGCGDAFGGGDQDVDDSVETVNNIIDESVGFGYTETGFDSKADMKAYLKGYFRKIMKHLKSTGASDEKLDEFKSDAQEIVKYLTSQFSELQFYMFRAMDTEAGMAYSYYPEGALAPVFLYIKWGLKEVKF 180
BLAST of mRNA_H-paniculata_contig4511.11351.1 vs. uniprot
Match: F0X2U9_9STRA (Uncharacterized protein AlNc14C1856G13087 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X2U9_9STRA) HSP 1 Score: 163 bits (412), Expect = 2.370e-43 Identity = 86/180 (47.78%), Postives = 116/180 (64.44%), Query Frame = 2
Query: 134 MLVYKDLISGDEMMTDAFPRLPVTDGDGNVIEGMFEVQSGTTVKGADSVDIGCGDAFGGGDEAVDDSAEKVNNVIDP---FKYTEVPFGNKTEFRDYLKDYVRKVRQKLKENGVEQPKIKEFMAQAPAIVKFLLSKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYIAMALEEEKF 664
MLV++D+ + DE+++DA V D +G+ I GM VQS KG+DSVDIGCGDAFG GD+ VDDS E VNN+ D F YTE+ F +KTE ++YLK Y RK+ + LK + V K+ F +A IVKFL++K+ D+Q + S E G++F YY +GA P F YI L+E KF
Sbjct: 1 MLVWQDIFTDDEVVSDANQIQLVKDVNGDEIPGMIMVQSRNVAKGSDSVDIGCGDAFGSGDQEVDDSVETVNNISDDSIGFGYTEISFASKTELKNYLKSYFRKIMKHLKTSEVTDEKLDSFKKEAQEIVKFLVAKYDDLQYYMFRSCDTEAGLSFSYYPDGATTPVFMYIKWGLKEVKF 180
BLAST of mRNA_H-paniculata_contig4511.11351.1 vs. uniprot
Match: A0A6V1UMP4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UMP4_HETAK) HSP 1 Score: 163 bits (413), Expect = 4.790e-43 Identity = 85/181 (46.96%), Postives = 118/181 (65.19%), Query Frame = 2
Query: 134 MLVYKDLISGDEMMTDAFPRLPVTDGDGNVIEGMFEVQSGTTVKGADSVDIGCGDAFGGGDEAV-DDSAEKVNNVIDP---FKYTEVPFGNKTEFRDYLKDYVRKVRQKLKENGVEQPKIKEFMAQAPAIVKFLLSKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYIAMALEEEKF 664
MLVYK + + DE+M+D++ + D DG V+ G+F V+S G +DIGCG+AFGG D+A DD EK NN+I F TE+PF +K EF+ +LKDYVRKVR ++K NGV Q +IK+ M +AP VK+LLS+++++Q + G SM EG M F + PTF YI L++EKF
Sbjct: 34 MLVYKCMFTDDELMSDSYKIKDIVDEDGEVVPGLFGVESKIVAVGGGDIDIGCGNAFGGDDDAGGDDGVEKENNIISESAGFGLTEMPFNSKAEFKAFLKDYVRKVRSEMKSNGVPQEEIKQMMNEAPIFVKYLLSQYSELQFYVGRSMDPEGTMIFARFYGEDLTPTFVYIKAGLKQEKF 214
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 293.5 |
| Seed ortholog evalue | 6.6e-77 |
| Seed eggNOG ortholog | 2880.D7FJI8 |
| Preferred name | TPT1 |
| KEGG ko | ko:K20301 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000909,GO:0001932,GO:0001934,GO:0002181,GO:0003006,GO:0003674,GO:0005085,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005737,GO:0005739,GO:0005768,GO:0005770,GO:0005771,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006970,GO:0006974,GO:0006979,GO:0007049,GO:0007093,GO:0007095,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0008017,GO:0008092,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008361,GO:0009058,GO:0009059,GO:0009314,GO:0009605,GO:0009607,GO:0009615,GO:0009628,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010212,GO:0010332,GO:0010389,GO:0010467,GO:0010494,GO:0010562,GO:0010564,GO:0010604,GO:0010638,GO:0010646,GO:0010648,GO:0010941,GO:0010948,GO:0010972,GO:0012505,GO:0015631,GO:0016043,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019827,GO:0019899,GO:0019953,GO:0022402,GO:0022414,GO:0022603,GO:0023051,GO:0023057,GO:0030001,GO:0030003,GO:0030154,GO:0030234,GO:0030582,GO:0030584,GO:0031012,GO:0031056,GO:0031058,GO:0031155,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031410,GO:0031570,GO:0031572,GO:0031573,GO:0031974,GO:0031981,GO:0031982,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032991,GO:0033043,GO:0033044,GO:0033127,GO:0033129,GO:0033554,GO:0034305,GO:0034599,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0040008,GO:0040014,GO:0040018,GO:0042173,GO:0042174,GO:0042221,GO:0042325,GO:0042327,GO:0042592,GO:0042981,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043900,GO:0043902,GO:0043937,GO:0043939,GO:0043943,GO:0043944,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0044818,GO:0045595,GO:0045596,GO:0045786,GO:0045793,GO:0045927,GO:0045930,GO:0045937,GO:0046483,GO:0046872,GO:0048232,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051020,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060255,GO:0060548,GO:0061458,GO:0062039,GO:0062040,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070796,GO:0070798,GO:0070838,GO:0070887,GO:0071214,GO:0071470,GO:0071478,GO:0071479,GO:0071480,GO:0071704,GO:0071840,GO:0072503,GO:0072507,GO:0072511,GO:0075259,GO:0075260,GO:0075261,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090304,GO:0097708,GO:0098727,GO:0098771,GO:0098772,GO:0104004,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902058,GO:1902060,GO:1902229,GO:1902230,GO:1902275,GO:1902531,GO:1902532,GO:1902749,GO:1902750,GO:1903047,GO:1903664,GO:1903665,GO:1905269,GO:1990624,GO:1990904,GO:2000026,GO:2000241,GO:2000243,GO:2000383,GO:2000384,GO:2000736,GO:2001020,GO:2001021,GO:2001233,GO:2001234,GO:2001242,GO:2001243,GO:2001252 |
| EggNOG free text desc. | microtubule binding |
| EggNOG OGs | KOG1727@1,KOG1727@2759 |
| Ec32 ortholog description | Mss4-like |
| Ec32 ortholog | Ec-04_006280.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko04131 |
| Exons | 6 |
| Model size | 1887 |
| Cds size | 534 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4511.11351.1 >prot_H-paniculata_contig4511.11351.1 ID=prot_H-paniculata_contig4511.11351.1|Name=mRNA_H-paniculata_contig4511.11351.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp
MLVYKDLISGDEMMTDAFPRLPVTDGDGNVIEGMFEVQSGTTVKGADSVD
IGCGDAFGGGDEAVDDSAEKVNNVIDPFKYTEVPFGNKTEFRDYLKDYVR
KVRQKLKENGVEQPKIKEFMAQAPAIVKFLLSKFADMQTFAGESMTAEGG
MAFGYYKEGAHNPTFAYIAMALEEEKF* back to topmRNA from alignment at H-paniculata_contig4511:2024..10076- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4511.11351.1 ID=mRNA_H-paniculata_contig4511.11351.1|Name=mRNA_H-paniculata_contig4511.11351.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8053bp|location=Sequence derived from alignment at H-paniculata_contig4511:2024..10076- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTCAGTTTTGCGCGTGAAGTTGCCAGTTTCTATTTCTTTGATTGTGACC
TTGAGTCATTTTCTCGAGACATGCCCGTGCTCGTTTGAGACCACAGATTC
ATCCCCCCTTTTCTGACCAACGCCGGCCTCACGATGCTCGTCTACAAGGA
TCTCATTAGTGGCGATGAGATGATGACGGATGCGTTCCCTCGTCTGCCTG
TGACGGATGGCGATGGGAATGTGATAGAGGGCATGTTTGAGGTGATGAAA
TAACTAATACTGTGCTCTGTTGCGACTGGTATAGACAGTCCCTCTATAAA
GACCGATTGTATTGTCCTGCGCTCTACGATACTATCTGCTCAGGTAGCAG
GGTAGTTTTTGGTGTTTTGTTCGGGGTAGGTGGGCGGGTATTCTAATGGA
GAGACCTGGGGTGATCCGTGTGTCTATGAAGTCGGTATAGCCAAAACGGT
GGCGTATTGTTGCTTGAACAAACCCTATCGACTAGGGGGTTATGTCGAGG
CTCCGCAATTTTTGATTCGCATATTGACTGCGGTGACGTGATTTCCACTG
CAGCCCCAGAAGAGAGCGATACCCTGCGGAAATGCCTGAATGGTCAAACA
CATGAAAGATATGCAGACAGCTCAGTAGTAAAAGTACGTTAGAGAAGATT
TGTTGATGCAGCGGTGTTCCTCAAAATTCCCCCATTCGTTTGTTCGTTCA
TGTAGCTGCGGTATAATCGCAGCAGTCGGACGTCTCCCGGCCACACTTAT
TACAGGTGGACAAAACACACCGCTTCATGGGATGGTCACGAGTAGGTACA
AACGTGTAGTCGCTACAGTGCATTGTGTTGTTTTTTGTGTTGCTATTATT
GTACCCCCAGTTTTCAACGATGTGAACTTGCACGATCCCCGTGCGATCGG
ACGGGTTGAATACCTGTGCGGACATAACATTCAGAGATGTTGCGCTGGGC
GACCAGCGTCCCCTGGATGTGTAAAATTCTGCCAACTAAACCAGCCGAAA
TTATTCACCGTTCTTTTTATTCGTGGGCGTCAAAACCTACTGTTTGTCAT
CTATTCTTGATTCATTTGTATCCCATCAGTCCGATATCTTGAACATGGCC
GATTACACGTATCGTGAGGTGCCAGGTATCTCTGGACAAACTCCAAAAAC
CACTCGGCACATGATCGCAGAGACGTCCGGATTTCGACCATGCTCAAAAT
GTTCAGGTAAAAAATTGATTCCCCTCAACTTTCACCAAGCTGACCACACT
AAAAACCATTAAAAAAACGGCAACTGTTGATCGCTGGCCTTGGCAAAACC
CTTAAACACCTAAAGCATTGGAGACATGTGGCCACCACCCTGAAAACAGT
ACATAGAGTACAAATCTGAAGTTGGCGTCCAATGACTGCTGTGTTTGACC
TTTATTGGCGAGTTTCTTGAGGGGGTAGGGTTTGAAAACAGCTTTCGGCA
CCCGGAGGGTTTCGTAAACCCGCAATTAGGATTGCAACTCCATCATTGTT
CGATCTGCTGTTTTTCCCATTAGTAGGGTAGTATTGCCGTATCCTCTCGT
GACGGCGTGTCTTATAATATAAACCAGATGTGACATCACCCCCGTTTCTG
TTGAAGCCGTGAGGAGTTGGAGCGGAAATATTTTTTTGCGTTGTACTCAC
TCGTGCCAGGCGCGTTACAATGGGGCGTCGGCAAAAGCGGCAAAAGTTGT
TTACACCACAATTATTCAACAGTGGCTAATGAAAACGAAAGCGGATTGAT
AACACTGATTGCCATAGCCACTCCCTCCCTAGTTGGGGGTGTTATGACAG
CGGAATTCAATAGTGATGTACATCTCCAGACGACCTTGCTACCAATTTAG
ATGCTTCTCTGGCCCTGGGTCTTGAAGTTGGTAGATGTAGAGGGTGATAT
TCGGAAATAGAGATGGCTCTATCTTGCCAAAACCTTTCATGACCTGCGAT
CAAAACCCAAATACGCACTCAGGATCATTTTCCTGCCTGTACTGTATGCC
GGAATGGCATTTTTGCGGCACGTGGCATTCGCGGCACTGAGCGTGAGTTG
TGACCTACACCGGGGTTGACGTGAGACTTGAGGTGTAATATATTGGCACA
GAGTGGTGTGAGGTTGGTAAAAATGATATCACGCCAGTGCTGAAACATTG
ATCTGAAATATATTTTACTTGTATATTGTGCCTGAAATTCTCAGGCCGCA
AATCACGGTCGTCAACCCGTGTTGTACAGCCGTAAATTCGAGCCTGCCGC
TTACACACGAAGCACAGACGAACCGAGGCGGACAGTAGGTGTCTGAGCTA
CTCTGACCGCGGGCCATCTATGTCGAAGCCAATTTGAGGCTAGTGATGGC
GTCAAGCGTGGACAGTGATATCCGAAAGCAGTAAGTCCCACAGTCCGATG
CGGCAGGGATTGTGAACCCTGCCAACTAGAGCACCGTTTCTCCCATCGGT
TGGTGAATAAAAGCATCCCCTGTTGACCTGAAAACGTTGCTAACGTATTG
GTCACCCGAAACCCATTTGCTGCAGTATGTACTGCTTAATCACTTTTTCA
TTGCTAGTTTTGACTAATACTGACGGTTGGCGCTGTATGGTGGACCCGTG
ATAGCATGAGGTACCCTGATTTTTACCGCGGTTTCATTTGAACGTGCCAC
GCGATCATTTTCTTTGTTTGAAGGTTATTTCTTTCGTATTTTCTCTTGAC
TACGTAACGTGAACACGGATTCAGGTGCAATCCGGCACCACCGTGAAGGG
CGCCGATTCCGTAGATATCGGATGCGGTGACGCGTTCGGCGGAGGTGACG
AGGCCGTCGACGACAGTGCGGAGAAGGTGAGTGAGTAATCTTTACTTTAG
TTTATGTTATTTTCCACGATATTAGAAGGATAATTGAAAATTTCAGGCCT
GCCTAGTATATCGAATCGTCGTCCAGTTTATGTGTCTTTTGGTGACTGGC
CTTATTGGACTGGACGAATAAATGTGAGCAATTCATCGCATTCCTTTGAT
CTAAATGTTTGTCGGTTCTGATTGCTGAAGCTTTCTCTTGAAATTGACCA
GTATTGACATGATAACTGCGTGCCGTATCGCTGTCCTCTCTGTTGTAAGG
TATGACCACAGCTATGCCTCAGCAGTTCTTGTTCGTCCTCAATGCATGGA
CTCGCTCGGGTCGCATGGAAATTCGGTGTTGAAGAGTTGCGCGGGCACAC
ACTGGAAGAAATGTTATACACTGATCACCCTCATCACCTCGCCCCCACAC
CCTGTATACCGTAGTGATTACCAGGGTACACAAAGGAGTGACGACCATTG
GATGTAGCGTCGTGGACTCTACCAGTGTGACTACATGGATATTTCATGAT
TTTTTCATAAGAGGTATTAGCTGTTGGGTTGGTGTCATGTTCACGATGCT
TTTGTGGCGGTTTTTTCTGATGGTGCTTGGATTAATTTTTTGACGTGACT
GTTGTGTTATACGTGTCAATTTTTGGTGGGGGCGGGGGGGCGGGGGGGTG
GGGACTAGCCGCAGTTGGTAGAACTCAGCTCTATCGCTGATTCATATCCC
GATGTTTCTCACGTTTTTAGGCTATCCAGCTGAACTGAACTTACGTTTGC
GCACTTACGAGCGGAAGTCGATCTACAATTGACCTACTTGATCACGTACA
ACAATTGCCTAACACAGCATCACCATCAGGAAGGCCAACATGTACATTGT
CGATATACACGGTTCGGCGCAGAAGCCAAATTAGTGAAGAGCGAGCCGAG
AGTTGGTTATAATTCCTGTAAAAAACACCGATGAGAATCGAAGAGCATAA
TGCAGGTATATTAGCTCATAACCTGGACGCGGCTGGATGGATGATTCACA
AATCAAGCTGACCAAACTACGTCGGGGTTACAACGCTGTGGTTGTCGCAG
GTTAATAACGTGATCGACCCTTTCAAGTACACTGAGGTGCCGTTCGGGAA
CAAGACAGAATTCAGGGACTACCTGAAGGTGCGTATGAGAACCTTGATAG
ATGTGCTCTAAATCGTCAAGAAGATGTGACGAAAATATTGATAATAGTCC
ATGGAAAATTGCGAACGATTCTTGTTGCGCCAACCCTTGGATTGTTTTCC
ATAGCCTTCTGTTCAGTTGTACAGAAGTTGTTCATTACTTGTTTGTTACG
GAATAAGACTGGTGATTAATAGTTGTCGCTTTATGAGAAGGCATTTCAAA
CCATCTACCTAATCTGTGAGGGAATACATGCCTGCAGATTAATGTGTGGT
AGTCGTGATTCACTACCGCTAGTCACAAAACTACATTCCCAGTATTTACT
TGTTGACCGAGGCCCTCGTTAAGTGCAGTAATCACATCAGTAGGGTGAGA
GGCGCATCTTTTCAGCAATGGGGAGGTGTTCCATTCATGAGTGTAATATG
CTAACACCTCGCATTTCCTACAAGTGAAACGCTTTTGGTAAATACACACG
AACCGGTCAACTCCATTTGTGATCCTTCACGAGAGATGATTGAGTAGGTC
CTTCCGCGGACGTTTGATGAGCCCACACAGAACCTTGGCCATATAACGTG
ATAAGATGTGAAATTGGAGCATTTGGACTCATGAAATCAAATGAGAAAAT
TGGGACGTAAAGAGTTGGGAGGTGAACAAAGTTGGGAGAAAACTAGGGTG
TGGGATGTCAAGAAAAGCTTGGCCAAGATCTGTCTTTCCCCCCCCTCAAA
GACAGCCATTGGTCGCAATACGAGGAATAGGAGAGTCTGGACTTTTAGGT
GAAGTACAAATGAGGACCTTGCTTTTTCTTTTTAATTGAAAGGCTCAAGG
GACCTCAATTTGCCTCTGTTCTTGTCAAGATTGGGACTGGAGCTCGACTC
TCCGAATCGTGTTTTTCGATGAGGATAAAAGACGCTCGGACCTCTTGATC
GTCATCGTTCGTTATTCTGATCAGGATTACGTCCGTAAGGTACGTCAAAA
ACTGAAGGAGAACGGCGTGGAGCAGCCAAAGATCAAGGAATTCATGGCGC
AAGCGCCAGCGATCGTAAAGTAAGTCATGTTTTGCTGTCTAGATGCCTAC
GCCGTGTTTGTTCGGTGACATTATTACTGTCTGTACCTGGGGTGTCGAGT
GTAGCTGGCTGCACTGCAAAGATTCGGGCATCATGAAAGGTTTCACAGGG
GTAAAGAAGGCAGGTGTCAGGACAAGGGGAAGCTTTAAACAACGAGTGCG
ACAACTGTACATTGTACATTGAGTCGACAGGTTGCTGGTGTTCCATGCAT
GGGTTTCATCTCGGACTGTTTTGGCGGAATAACCTCTACACTAAAATTTC
GTTCTCAAATTGTATTTCTCAGGTGTGCTGAATTTTCATGATTCTTCCCT
CGTCAATGGTCGAATATCAGTCCTCAATTTTACATGTCATTACTACACAG
TAGGCCAACGTCGCAAAAAAAAAAGGCTTCAGGCTTTTTTCATGGGAAGG
CAGCGTTAATCTGTTGAGGTTTGGCTGTTCCCGTTTTGATTAAAAGATGG
TGATGAAATTAAGATTATTACGTAACGTTTGGGTGTTTTTGGTGCGCCCA
GCACATTATACGGGTCTTCCTCTTGATTTCATCGATCCAGCGCAGCCCCT
TTCTCCCTCCCCCATCCTCAAGTGTGCTAGACTATCAAGCCTACATAGGT
GGAATGATAGGATGATGACGAGGCCGCGCTGAATAGTTGGATAATGGGAG
TTGAGGACTCGTCAATCATCAGTCCGTCGCGGCCGAAGTGGATAAATTAC
ATGGATGTCGACATTTTATTTCCCCCTTACCTACGTCTGCTGAGTGCAGG
TTCCTGTTGAGTAAATTCGCCGACATGCAGACTTTCGCTGGAGAGTCGAT
GACAGCGGAAGGGGGGATGGCTTTCGGGTACTACAAAGAGGGTGCCCACA
ACCCGACATTTGCCTACATCGCCATGGCGCTTGAGGAGGAAAAGGTAAGA
AAACGTTGTCTTGTACGTATATAGTACATCGAAAGAGTTAGTTATTAGAT
GACTAATTGGTTGATGTTATAGTTGCCTGATGTTTTGGCGTGCTTCAATG
ATGATGAGGTTCTTTCACCTTTTTAGGGTTGAGAGGAAGAGGTGAGAGCC
GAAAAAGCCTCACCTGTTGGCTCATAAGAGTGGCTTTCATCTTTCTGTAC
CTTGTTTTCATCAAAACAGATGGTTGTACTTGTTGTTCGACTACTGGTTT
CTTGACGTGAACACGTGGTAAAGTTACCGTGGCGGTGATACTCTTTTTCC
CGATTTCTTCGGTGCTTCGTGTACCTACAAGCGCTCGGCCCTGCGAAAAG
TGTAATGAGATCATTGTATAAGCAACTTTTCACCACTTGGGACGCTGTGC
CGTGAGGCTTTCGGAGAACGAAATCGAGTTTGAACTTTGTGTAGTTTGTC
TAGGTCCCTGTATAGTTTAGTGGTGTAAGCTGGGCTAGGTTGACTACCTC
CTTGGATTTTGACCATGCTGTAAAGCGTGAAAGAGTCATTAAACATGTTG
AATGCACGTTCATGGTTGAGTTGAATATCTCCCGTGAAGTGTTTTTCTAC
ACTGTACTTCATTTTGGTTGCATCGCGCTTTTTTTATTGCGAACTATCAG
GCTACTCCGTGTCGCCTGTTTGTCCTTGGCATAGTGAGTTTAAATTGACG
AGCGCTGGCGTTCATCGTGCCATACATTCCTCGACATCTTTAGAAGTCGT
CTCAATAAATGATGGCTGGTATGATCAAGTTTGCGAAAATAGTAGGTAGC
CACTAAATGTTGTATTTGGATGGAACATACCTCATGACTGTCCTCCCCCG
GTCCCTTCCTGTCTTTCTTCGTGACAGTTTTAACGCGGCGGGGTCTTCCG
TGTTATGCATTCGCGTATGGAGAGAAAATTGTTGCAGGGTGGTGAACGCT
TTTGTAGAGTATGCGGGACGAGAGGGGGCGAGATGGTTGTGATGATTGCT
GCCTTTGAACACGGTGCTAGGGCAATAGCTCAAGAGGTGTCTCTCCGCTG
CTTTGAAACGAAGCCCTCTTGTGCGTGTGGTTCCCTGATACCGTGCGAGT
GAAGTTGCATTGGAAGGTGGCCCATCTGTGGCTGGATGTTGTATTGTTTT
CCACTGCGGATTGCTTTTTACACAGCAACGCTGGTGGGCGTGATTGTGGC
GACGGCATGATGGTCGTTTCGGCAGACGCGCTGTGGCTGACCCACATGTG
GAAAAGCTATATTACACACTAGTCGGACAGTATTTGACTACATGAGAGCC
CAGGGCATACAGTTGTTGCAAACTCACGTGCTAGATCTCGTCCTCTCAAT
CTTGACCGATTTGAGTACCTTTTGTCCCTTGCGTCCATGATGCATGGCAA
AATACATGTGCTTGTTGTGGCATTTGGGGGTGTTGGTGTGAAAGTGATCT
CGACGGCAAATAATGAGTCCAAGTTGTTTCGGGTTGGATTGGCGTAATGT
CTCCCATGTCTTGAGTATGTAGACTTCTCGTTGTTACTTGTTAGTCTATC
TTCATCTCCACTCTTGTCTGGTGACGCTGGTTGCAGTTTGGAAAGGGGGC
ACATGGATGGTGTGCCCTTGTCAATGTTAATAATTGGTATCGGGACAAAG
TCGGGGAAACGAATGAGATTACCTGCGTGACTGATGTCGAAAAATGTGAG
CGGTGAGATTTTTGGGGTACTGATGGCAAGGCGCTGATGATTTCTGGACG
CCGTCGATCCCCTTTTGCGCCCAAAATGAGCCTTACTTCATTGTGGCCAT
CAGGGAAGGTGTTATTTTTTCATGTTTGTTTCATCGCGTTTATTACCACC
GGGACTGCCGTCATCATCCACGGGTGTACCGTGATGAAAAAATCCAACAC
TTAGTGTCTGAATTGTCGTTCGGGCGTCGTTGATGCACATATGGCCAGAG
GTTACCTTCAAAGTTCCTTGTAGCGGATATTACATGTTCCACCATTGTGG
AAAGGTTGACAATGTGCATGGAATCTACATGGACGTTGGGTAAACGCCAG
CACCAACCACAGCGTGGACAAGTTGTGATATATGCAACACCGTACCCCGT
GGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig4511:2024..10076- >mRNA_H-paniculata_contig4511.11351.1 ID=mRNA_H-paniculata_contig4511.11351.1|Name=mRNA_H-paniculata_contig4511.11351.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1068bp|location=Sequence derived from alignment at H-paniculata_contig4511:2024..10076- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCGTCTACAAGGATCTCATTAGTGGCGATGAGATGATGACGGATGC
GTTCCCTCGTCTGCCTGTGACGGATGGCGATGGGAATGTGATAGAGGGCA
TGTTTGAGATGCTCGTCTACAAGGATCTCATTAGTGGCGATGAGATGATG
ACGGATGCGTTCCCTCGTCTGCCTGTGACGGATGGCGATGGGAATGTGAT
AGAGGGCATGTTTGAGGTGCAATCCGGCACCACCGTGAAGGGCGCCGATT
CCGTAGATATCGGATGCGGTGACGCGTTCGGCGGAGGTGACGAGGCCGTC
GACGACAGTGCGGAGAAGGTGCAATCCGGCACCACCGTGAAGGGCGCCGA
TTCCGTAGATATCGGATGCGGTGACGCGTTCGGCGGAGGTGACGAGGCCG
TCGACGACAGTGCGGAGAAGGTTAATAACGTGATCGACCCTTTCAAGTAC
ACTGAGGTGCCGTTCGGGAACAAGACAGAATTCAGGGACTACCTGAAGGT
TAATAACGTGATCGACCCTTTCAAGTACACTGAGGTGCCGTTCGGGAACA
AGACAGAATTCAGGGACTACCTGAAGGATTACGTCCGTAAGGTACGTCAA
AAACTGAAGGAGAACGGCGTGGAGCAGCCAAAGATCAAGGAATTCATGGC
GCAAGCGCCAGCGATCGTAAAGATTACGTCCGTAAGGTACGTCAAAAACT
GAAGGAGAACGGCGTGGAGCAGCCAAAGATCAAGGAATTCATGGCGCAAG
CGCCAGCGATCGTAAAGTTCCTGTTGAGTAAATTCGCCGACATGCAGACT
TTCGCTGGAGAGTCGATGACAGCGGAAGGGGGGATGGCTTTCGGGTACTA
CAAAGAGGGTGCCCACAACCCGACATTTGCCTACATCGCCATGGCGCTTG
AGGAGGAAAAGGTTCCTGTTGAGTAAATTCGCCGACATGCAGACTTTCGC
TGGAGAGTCGATGACAGCGGAAGGGGGGATGGCTTTCGGGTACTACAAAG
AGGGTGCCCACAACCCGACATTTGCCTACATCGCCATGGCGCTTGAGGAG
GAAAAGTTTTAATTTTAA back to top
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