mRNA_H-paniculata_contig449.11303.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig449.11303.1
Unique NamemRNA_H-paniculata_contig449.11303.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig449.11303.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 227 bits (578), Expect = 4.560e-69
Identity = 115/304 (37.83%), Postives = 178/304 (58.55%), Query Frame = 1
Query:   79 VGEFKHDIGQRFRMKDLGSLSRVLGKEVRRDRPNGTLSISQGSYFREVLNRYGFDECRGVPAPAEGKVKISALESADKPSKPTANSTEYRGMVGSIMYASTGTRPDLGYAVHQAARRVEDPSREDFSTYKRIIHYLSTVPDLGITFGGKSNGHGLKGFVNADWAGNIEDRKSTTGYVFKLNGRAISWCSRKQQLVTWSNTEAECVDAGEAGKEAVYLKGLLGSIDFGCSGGTTLFEYNKSAFNLNKGPSVHCRTNHIGVRWHGIREWIWEGILTLNYVQTGDQLADILTKGLSRIKFQRLESLL 990
            + E K  IG +F++ D+G +  VLG  +RRDR  G ++ISQ +Y + +L R+G ++C+ V  P E       L   + P+    N+ EY+ ++G + Y +T TRPDL  AV   ++ +  PS+E +   KR++ Y+    + G+ F GKS    L G+ +ADWA +++ R+ST+GYVF++NG  +SWCS++Q  VT S TEAE V    A +E V+L+ LL  I       + + E N+ A  L+K P  H RT HI V +H +RE + +  + +NY  T   LAD++TK L R  FQ+   +L
Sbjct:    2 LSEEKKLIGLKFKVDDMGEVKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQELPDDENPT----NTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNYCSTDKMLADVMTKSLPRQTFQKFRDML 301          
BLAST of mRNA_H-paniculata_contig449.11303.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 227 bits (578), Expect = 7.970e-68
Identity = 122/319 (38.24%), Postives = 192/319 (60.19%), Query Frame = 1
Query:   28 LVAIYVDYLVIAGRRK-EVGEFKHDIGQRFRMKDLGSLSRVLGKEVRRDRPNGTLSISQGSYFREVLNRYGFDECRGVPAPAEGKVKI--SALESADKPSKPTANSTEYRGMVGSIMYASTGTRPDLGYAVHQAARRVEDPSREDFSTYKRIIHYLSTVPDLGITFGGKSNGHGLKGFVNADWAGNIEDRKSTTGYVFKLNGRAISWCSRKQQLVTWSNTEAECVDAGEAGKEAVYLKGLLGSIDFGCSGGTTLFEYNKSAFNLNKGPSVHCRTNHIGVRWHGIREWIWEGILTLNYVQTGDQLADILTKGLSRIKFQR 975
            ++ +YVD L+I  R K E+GE K  + + F +K+LG L   LG E+ R+R + T+ ++Q +Y + +  ++G ++C+ V  PA+   K+   A +    P  P      YR +VG++MY +T TRPD+  AV + A+  E  ++  +   KRI+ YL T  DLG+ F G + G  L G+ +A WAG+++ R+STTGYVF LNG AISW S++Q  V  S+TEAE +    A +EAV+L+ LL  +   C   TT+F+ N+    L K P+ H RT HI +++H +RE + + ++ L Y  T + +AD  TK L+R K ++
Sbjct:   88 IIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKPAEDEVFVPRYP------YRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALARPKHRQ 399          
BLAST of mRNA_H-paniculata_contig449.11303.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM)

HSP 1 Score: 227 bits (578), Expect = 1.470e-67
Identity = 122/331 (36.86%), Postives = 190/331 (57.40%), Query Frame = 1
Query:    1 LATKGETDILVAIYVDYLVIAGRRKEVGEF-KHDIGQRFRMKDLGSLSRVLGKEVRRDRPNGTLSISQGSYFREVLNRYGFDECRGVPAPAEGKVKISA-LESADKPSKPTANSTEYRGMVGSIMYASTGTRPDLGYAVHQAARRVEDPSREDFSTYKRIIHYLSTVPDLGITFGGKSNGHGLKGFVNADWAGNIEDRKSTTGYVFKLNGRAISWCSRKQQLVTWSNTEAECVDAGEAGKEAVYLKGLLGSI-DFGCSGGTTLFEYNKSAFNLNKGPSVHCRTNHIGVRWHGIREWIWEGILTLNYVQTGDQLADILTKGLSRIKFQRLES 984
            L   G+  I VA+YVD LV+A    E+ E  KH + +RF M DLG L   LG E++  R +G +++ Q  + + +L ++G  + + V  P +  +K++  +       + T  +  YR +VG++MY    TRPDL  AV   ++   DP    +   KR++ YL   P  G+ F  + +  G+ G+ +ADWAG+IE R+ST+GY F +NG  ISW S+KQ+ V  S+TEAE +   EA +EAV+LK  L  + +        ++E N+ +  L K P  H RT HI +R+H +RE + +G + L YV T D LAD++TK ++ ++FQ L S
Sbjct:   74 LKRDGQDMIFVALYVDDLVLASSNDELLELTKHALSKRFEMTDLGELEYFLGMEIKNTRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSVVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAVQFQVLRS 403          
BLAST of mRNA_H-paniculata_contig449.11303.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT)

HSP 1 Score: 224 bits (572), Expect = 3.260e-67
Identity = 116/322 (36.02%), Postives = 197/322 (61.18%), Query Frame = 1
Query:   28 LVAIYVDYLVIAGRRKE-VGEFKHDIGQRFRMKDLGSLSRVLGKEVRRDRPNGTLSISQGSYFREVLNRYGFDECRGVPAPAEGKVK-ISALESADKPSKPTANSTEYRGMVGSIMYASTGTRPDLGYAVHQAARRVEDPSREDFSTYKRIIHYLSTVPDLGITFGGKSNGHGLKGFVNADWAGNIEDRKSTTGYVFKLNGRAISWCSRKQQLVTWSNTEAECVDAGEAGKEAVYLKGLLGSIDFGCSGGTTLFEYNKSAFNLNKGPSVHCRTNHIGVRWHGIREWIWEGILTLNYVQTGDQLADILTKGLSRIKFQRLESL 987
            +VAI+VD +++AG+  E + + K  I +RF++KD+G L  +LG +V ++  +G + I Q +Y   ++ +YG + C+ V  P +   K +SA+E ++       N  EY+  VGS++Y S+ TRPD+ +AV+  A+   + + E ++  KRI  YL    + G+ +   +N   + GF +ADWAG++ DRKST+GY F++NG A+SW S+KQ  V  S  EAE V    A +EA++++ LL  ++       T++E N+SA  ++K P  H R+ HI +++H +R+ + +  LT+ Y  TG  LAD+ TKG+ + +F++L  L
Sbjct:   63 VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSE-----LFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 376          
BLAST of mRNA_H-paniculata_contig449.11303.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 221 bits (563), Expect = 9.190e-67
Identity = 116/308 (37.66%), Postives = 186/308 (60.39%), Query Frame = 1
Query:   52 LVIAGRRKEVGEFKHDIGQRFRMKDLGSLSRVLGKEVRRDRPNGTLSISQGSYFREVLNRYGFDECRGVPAPAEGKVKISALESADKPSKPTANSTEYRGMVGSIMYASTGTRPDLGYAVHQAARRVEDPSREDFSTYKRIIHYLSTVPDLGITFGGKSNGHGLKGFVNADWAGNIEDRKSTTGYVFKLNGRAISWCSRKQQLVTWSNTEAECVDAGEAGKEAVYLKGLLGSIDFGCSGGTTLFEYNKSAFNLNKGPSVHCRTNHIGVRWHGIREWIWEGILTLNYVQTGDQLADILTKGLSRIKFQR 975
            ++ +  + E+GE K  + + F +K+LG L   LG E+ R+R + T+ ++Q +Y + +  ++G ++C+ V  PA+   K+    S D+   P      YR +VG++MY +T TRPD+  AV + A+  E  ++  +   KRI+ YL T  DLG+ F G + G  L G+ +A+WAG+++ R+STTGYVF LNG AISW S++Q  V  S+TEAE +    A +EAV+L+ LL  +   C G TT F+ N+    L K P+ H RT HI +++H +RE + + ++ L Y  T + +AD  TK L+R K ++
Sbjct:    1 MIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKL-VKPSEDEDFVPRY---PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALARPKHRQ 303          
BLAST of mRNA_H-paniculata_contig449.11303.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4)

HSP 1 Score: 231 bits (590), Expect = 1.160e-66
Identity = 128/318 (40.25%), Postives = 182/318 (57.23%), Query Frame = 1
Query:   25 ILVAIYVDYLVIAGRRKE-VGEFKHDIGQRFRMKDLGSLSRVLGKEVRRDRPNGTLSISQGSYFREVLNRYGFDECRGVPAPAEGKVKISALESADKPSKPTANSTEYRGMVGSIMYASTGTRPDLGYAVHQAARRVEDPSREDFSTYKRIIHYLSTVPDLGITFGGKSNGHGLKGFVNADWAGNIEDRKSTTGYVFKLNGRAISWCSRKQQLVTWSNTEAECVDAGEAGKEAVYLKGLLGSIDFGCSGGTTLFEYNKSAFNLNKGPSVHCRTNHIGVRWHGIREWIWEGILTLNYVQTGDQLADILTKGLSRIKFQR 975
            ++VA+YVD L+I     E V + K D+  +F M DLG    +LG E+ RDRP+ TLSISQ +YF E+L R+G  +C+  P P E  V +  L  A+       +S  Y+  VGS+MY   GT PD+ ++V   ++    P  E     KR++ Y+    DLG+ F G  N   ++ F++ADWA +  +R S TGYV  L G  ISW S+KQ     S+TEAE + A  A KEA++L+  +  + F     T L+  N+SA  L K    H RT HI VR+H IRE + +  + L Y+ T DQ+AD LTKGLS++K  +
Sbjct:  393 VVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPMEVGVSLRKLSEAE------VDSQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVFIGSGNTK-IEVFIDADWAQDKNNRHSLTGYVCTLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHINVRYHFIRENVEDEQIELVYIPTEDQVADALTKGLSKVKLDK 703          
BLAST of mRNA_H-paniculata_contig449.11303.1 vs. uniprot
Match: A0A0A9YPH4_LYGHE (Copia protein n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YPH4_LYGHE)

HSP 1 Score: 220 bits (561), Expect = 4.810e-66
Identity = 122/326 (37.42%), Postives = 187/326 (57.36%), Query Frame = 1
Query:   10 KGETD--ILVAIYVDYLVIAGRR-KEVGEFKHDIGQRFRMKDLGSLSRVLGKEVRRDRPNGTLSISQGSYFREVLNRYGFDECRGVPAPAEGKVKISALESADKPSKPTANSTEYRGMVGSIMYASTGTRPDLGYAVHQAARRVEDPSREDFSTYKRIIHYLSTVPDLGITFGGKSNGHGLKGFVNADWAGNIEDRKSTTGYVFKLNGRAISWCSRKQQLVTWSNTEAECVDAGEAGKEAVYLKGLLGSIDFGCSGGTTLFEYNKSAFNLNKGPSVHCRTNHIGVRWHGIREWIWEGILTLNYVQTGDQLADILTKGLSRIKFQRL 978
            K ETD  + V ++VD L+I G    E+  FKH++  +F M DLG +   LG  + RDR N T+ I Q  Y +++L ++G D  + +  P E  +K++  +S     KP      YR ++GSI+Y   G+RPDL +A++  +R  E P+ E ++  KR++ Y+     LG+ +  K   + L GFV+ADW G+++DR+S +GY     G  +SW ++KQ  V+ S+TEAE V    A  EA+ L G++  +    S    LFE N+S  +L +      R  HI ++ H IRE + EG++ LNYV T +Q ADILTKGL +  F+ L
Sbjct:   18 KSETDHRLYVFLFVDDLLIIGNNLNEIERFKHNLRNQFEMSDLGEVKNFLGLTIERDRSNKTMKIHQKDYIQKLLIKFGMDYSKPIGTPVEKNLKLNFNKSHQTLDKP------YRELIGSIIYLMIGSRPDLCFAINFFSRYQESPTVEHWNYLKRVLRYIRGSAHLGLLYSDKKCEYVLSGFVDADWVGDVDDRRSVSGYCMYACGNIVSWATKKQTTVSLSSTEAEYVALSSAVCEAISLNGVVNDLGLK-SDFVMLFEDNQSCIHLARNRENSKRIKHIDIKHHFIREKVDEGVIKLNYVSTSEQNADILTKGLDKQSFEYL 336          
BLAST of mRNA_H-paniculata_contig449.11303.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID)

HSP 1 Score: 235 bits (599), Expect = 5.320e-66
Identity = 122/328 (37.20%), Postives = 194/328 (59.15%), Query Frame = 1
Query:    7 TKGETD--ILVAIYVDYLVIAGRRKEV-GEFKHDIGQRFRMKDLGSLSRVLGKEVRRDRPNGTLSISQGSYFREVLNRYGFDECRGVPAPAEGKVKISALESADKPSKPTANSTEYRGMVGSIMYASTGTRPDLGYAVHQAARRVEDPSREDFSTYKRIIHYLSTVPDLGITFGGKSNGHGL-KGFVNADWAGNIEDRKSTTGYVFKLNGRAISWCSRKQQLVTWSNTEAECVDAGEAGKEAVYLKGLLGSIDFGCSGGTTLFEYNKSAFNLNKGPSVHCRTNHIGVRWHGIREWIWEGILTLNYVQTGDQLADILTKGLSRIKFQRL 978
            TKG+    ++VA+YVD L+IA    ++  E K  +G+RF M+D   +  +LG +V+RDR N  L+I Q ++   VLNR+  +EC+ V  P E  +K   L   ++         +Y+  +G + YAS GTRPD+  AV   ++ +  P ++ +   KR++ YL    D G+ + G  +G  L  GF +ADWAG+I+ RKST+GYVFK+    +SW S++Q +V  S TEAE V   +A +E ++L+ L   +DF  +  T +FE N+ A  L K    H RT HI +++H +R+ + + ++ L Y  T + +AD+LTKGL R +F++L
Sbjct:  963 TKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFEKLADDEE----IVKLKDYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPTKMFEDNQGAIELAKNQPNHSRTKHIDIKFHHVRDAVAKKVIDLEYCPTDEMIADLLTKGLPRPQFEKL 1286          
BLAST of mRNA_H-paniculata_contig449.11303.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 219 bits (558), Expect = 3.230e-65
Identity = 125/324 (38.58%), Postives = 190/324 (58.64%), Query Frame = 1
Query:   10 KGETDILVAIYVDYLVIAGRRKEV-GEFKHDIGQRFRMKDLGSLSRVLGKEVRRDRPNGTLSISQGSYFREVLNRYGFDECRGVPAPAEGKVKISALESADKPSKPTANSTEYRGMVGSIMYASTGTRPDLGYAVHQAARRVEDPSREDFSTYKRIIHYLSTVPDLGITFGGKSNGHGLKGFVNADWAGNIEDRKSTTGYVFKLNGRAISWCSRKQQLVTWSNTEAECVDAGEAGKEAVYLKGLLGSIDFGCSGGTTLFEYNKSAFNLNKGPSVHCRTNHIGVRWHGIREWIWEGILTLNYVQTGDQLADILTKGLSRIKFQRL 978
            +G++ ++V++YVD L+  G    +  EFK  + + F M DLG +   LG EV +D     + I+Q  Y  E L +YG + C  V  P     K+S     D      A+ T ++ +VGS+ Y  T TRPDL Y+V+  +R +E+P+ +     KRI+ Y+      GI +  +  G  L GFV++D+AG+++DRKST+GYVF L G A+SW S+KQ +VT S TEAE V A     +A++L+ +LG I +    GTTLF  N S   L+K P +H R+ HI VR++ +R+ + E ++ L +  T DQL+DI+TK +    F+RL
Sbjct:   51 EGDSILIVSLYVDDLIYTGNSLTMLEEFKQSMMKEFAMTDLGKMKFFLGVEVIQD--GRGIFINQQKYAEETLKKYGMEGCNAVKNPIVPGNKLSRAGGGD-----AADPTMFKQLVGSLRYL-TATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAVKLEVFERL 365          
BLAST of mRNA_H-paniculata_contig449.11303.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 230 bits (587), Expect = 2.430e-64
Identity = 136/335 (40.60%), Postives = 186/335 (55.52%), Query Frame = 1
Query:   25 ILVAIYVDYLVIAGR-RKEVGEFKHDIGQRFRMKDLGSLSRVLGKEVRRDRPNGTLSISQGSYFREVLNRYGFDECRGVPAPAEGKVKISALESADKPSKPTANSTEYRGMVGSIMYASTGTRPDLGYAVHQAARRVEDPSREDFSTYKRIIHYLSTVPDLGITF---GGKSNGHGLKGFVNADWAGNIEDRKSTTGYVFKLNGRAISWCSRKQQLVTWSNTEAECVDAGEAGKEAVYLKGLL------GSIDFGCSGGTT---LFEYNKSAFNLNKGPSVHCRTNHIGVRWHGIREWIWEGILTLNYVQTGDQLADILTKGLSRIKFQRLESLL 990
            +++A+YVD ++IAG  R  +  FK  + +RF M DLGS   +LG E+ RDR   TLSISQ  Y  ++L R+G   CR V  P E  +K+  L  A    KP      Y+  +GS+MYA  G+RPDL +AV   ++    P  + +    R+  YL    DL +++      SNG    G+ +ADWAG++ DR+ST+G  F L+G A+SW S+KQQ +  S+TEAE V    A KEA++L+ LL       SI     G      L   N+SA  L K  + H RT HI VR H IR+ I  G L   YV T DQ+AD+LTK L+R K  R  + L
Sbjct: 1178 LIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATIDPKP------YQSALGSLMYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVSWQSKKQQSIAQSSTEAEYVALASAAKEALWLRALLDDLAIPASISRSSPGSKVTPLLLVDNQSAMALAKNSTFHDRTKHIAVRHHFIRDEIERGTLEAEYVPTDDQVADVLTKALAREKHVRFTTAL 1506          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig449.11303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9D5L2_PARCT4.560e-6937.83Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
H3GB17_PHYRM7.970e-6838.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB98_PHYRM1.470e-6736.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9M6E1_PARCT3.260e-6736.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB69_PHYRM9.190e-6737.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C9VSW1_SPHS41.160e-6640.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A9YPH4_LYGHE4.810e-6637.42Copia protein n=1 Tax=Lygus hesperus TaxID=30085 R... [more]
A0A7M6DPI8_9CNID5.320e-6637.20Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A6D2JBX5_9BRAS3.230e-6538.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1M2VV58_TRAPU2.430e-6440.60Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig449contigH-paniculata_contig449:25429..26487 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Exons2
Model size996
Cds size996
Stop1
Taxonomic scopeArthropoda
Seed ortholog score223.8
Seed ortholog evalue1.2e-55
Seed eggNOG ortholog7029.ACYPI24114-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38DPC@33154,3BI7U@33208,3CTS1@33213,3SQRW@50557,41WYJ@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930348.7690406-CDS-H-paniculata_contig449:25428..260981622930348.7690406-CDS-H-paniculata_contig449:25428..26098Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig449 25429..26098 -
1691481252.2752652-CDS-H-paniculata_contig449:25428..260981691481252.2752652-CDS-H-paniculata_contig449:25428..26098Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig449 25429..26098 -
1622930348.7891288-CDS-H-paniculata_contig449:26161..264871622930348.7891288-CDS-H-paniculata_contig449:26161..26487Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig449 26162..26487 -
1691481252.2854955-CDS-H-paniculata_contig449:26161..264871691481252.2854955-CDS-H-paniculata_contig449:26161..26487Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig449 26162..26487 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig449.11303.1prot_H-paniculata_contig449.11303.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig449 25429..26487 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig449.11303.1

>prot_H-paniculata_contig449.11303.1 ID=prot_H-paniculata_contig449.11303.1|Name=mRNA_H-paniculata_contig449.11303.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=332bp
LATKGETDILVAIYVDYLVIAGRRKEVGEFKHDIGQRFRMKDLGSLSRVL
GKEVRRDRPNGTLSISQGSYFREVLNRYGFDECRGVPAPAEGKVKISALE
SADKPSKPTANSTEYRGMVGSIMYASTGTRPDLGYAVHQAARRVEDPSRE
DFSTYKRIIHYLSTVPDLGITFGGKSNGHGLKGFVNADWAGNIEDRKSTT
GYVFKLNGRAISWCSRKQQLVTWSNTEAECVDAGEAGKEAVYLKGLLGSI
DFGCSGGTTLFEYNKSAFNLNKGPSVHCRTNHIGVRWHGIREWIWEGILT
LNYVQTGDQLADILTKGLSRIKFQRLESLLM*
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mRNA from alignment at H-paniculata_contig449:25429..26487-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig449.11303.1 ID=mRNA_H-paniculata_contig449.11303.1|Name=mRNA_H-paniculata_contig449.11303.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1059bp|location=Sequence derived from alignment at H-paniculata_contig449:25429..26487- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCGCGACGAAGGGGGAGACAGACATTCTCGTAGCCATTTATGTTGACTA CCTGGTCATCGCTGGACGTCGTAAGGAGGTAGGCGAGTTCAAGCACGACA TAGGTCAGCGTTTTAGGATGAAAGACTTGGGCTCCCTCTCGCGCGTGTTG GGAAAAGAAGTACGACGTGACCGCCCCAATGGTACCCTATCAATATCCCA AGGTAGCTATTTCCGCGAGGTACTAAACAGATACGGTTTTGATGAATGTC GAGGAGTACCCGCCCCTGCAGAGGGAAAAGTGAAGATTTCGGCACTCGAA TCGGCCGACAAGCCCTCCAAACCGACGTCTCTTGGAGCTGTACTGTCGGA CATAGGCACAGGCGTGCAAGAAAGCAGCAGTAGAAGAAGTGCCAATTCAA CTGAATACAGAGGCATGGTAGGATCAATCATGTATGCCTCAACAGGAACT CGACCTGATCTGGGATACGCGGTACACCAAGCAGCACGTCGTGTGGAGGA CCCATCTCGAGAAGACTTCAGTACATACAAGCGCATTATTCATTATCTCA GTACCGTGCCTGACCTCGGAATTACGTTCGGCGGTAAGAGCAATGGTCAC GGTCTTAAAGGATTCGTTAATGCCGACTGGGCGGGAAATATCGAGGACCG AAAGTCCACAACAGGATACGTATTCAAGCTAAACGGCCGTGCGATAAGTT GGTGCTCCAGGAAGCAACAGTTAGTCACATGGTCCAATACAGAGGCAGAG TGCGTTGATGCAGGAGAAGCAGGAAAGGAGGCGGTTTATCTTAAGGGGTT ACTAGGATCGATAGATTTCGGATGCAGCGGGGGCACGACATTGTTTGAGT ACAACAAATCAGCTTTTAATCTCAATAAGGGACCTAGCGTACACTGCAGG ACAAACCACATCGGAGTGCGCTGGCACGGAATTCGAGAGTGGATTTGGGA AGGAATATTGACGTTGAATTACGTGCAGACTGGCGACCAACTCGCTGACA TTTTAACGAAAGGACTGAGCAGAATAAAGTTTCAGAGACTTGAAAGTTTA CTCATGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig449:25429..26487-

>mRNA_H-paniculata_contig449.11303.1 ID=mRNA_H-paniculata_contig449.11303.1|Name=mRNA_H-paniculata_contig449.11303.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1992bp|location=Sequence derived from alignment at H-paniculata_contig449:25429..26487- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCGCGACGAAGGGGGAGACAGACATTCTCGTAGCCATTTATGTTGACTA
CCTGGTCATCGCTGGACGTCGTAAGGAGGTAGGCGAGTTCAAGCACGACA
TAGGTCAGCGTTTTAGGATGAAAGACTTGGGCTCCCTCTCGCGCGTGTTG
GGAAAAGAAGTACGACGTGACCGCCCCAATGGTACCCTATCAATATCCCA
AGGTAGCTATTTCCGCGAGGTACTAAACAGATACGGTTTTGATGAATGTC
GAGGAGTACCCGCCCCTGCAGAGGGAAAAGTGAAGATTTCGGCACTCGAA
TCGGCCGACAAGCCCTCCAAACCGACCTCGCGACGAAGGGGGAGACAGAC
ATTCTCGTAGCCATTTATGTTGACTACCTGGTCATCGCTGGACGTCGTAA
GGAGGTAGGCGAGTTCAAGCACGACATAGGTCAGCGTTTTAGGATGAAAG
ACTTGGGCTCCCTCTCGCGCGTGTTGGGAAAAGAAGTACGACGTGACCGC
CCCAATGGTACCCTATCAATATCCCAAGGTAGCTATTTCCGCGAGGTACT
AAACAGATACGGTTTTGATGAATGTCGAGGAGTACCCGCCCCTGCAGAGG
GAAAAGTGAAGATTTCGGCACTCGAATCGGCCGACAAGCCCTCCAAACCG
ACTGCCAATTCAACTGAATACAGAGGCATGGTAGGATCAATCATGTATGC
CTCAACAGGAACTCGACCTGATCTGGGATACGCGGTACACCAAGCAGCAC
GTCGTGTGGAGGACCCATCTCGAGAAGACTTCAGTACATACAAGCGCATT
ATTCATTATCTCAGTACCGTGCCTGACCTCGGAATTACGTTCGGCGGTAA
GAGCAATGGTCACGGTCTTAAAGGATTCGTTAATGCCGACTGGGCGGGAA
ATATCGAGGACCGAAAGTCCACAACAGGATACGTATTCAAGCTAAACGGC
CGTGCGATAAGTTGGTGCTCCAGGAAGCAACAGTTAGTCACATGGTCCAA
TACAGAGGCAGAGTGCGTTGATGCAGGAGAAGCAGGAAAGGAGGCGGTTT
ATCTTAAGGGGTTACTAGGATCGATAGATTTCGGATGCAGCGGGGGCACG
ACATTGTTTGAGTACAACAAATCAGCTTTTAATCTCAATAAGGGACCTAG
CGTACACTGCAGGACAAACCACATCGGAGTGCGCTGGCACGGAATTCGAG
AGTGGATTTGGGAAGGAATATTGACGTTGAATTACGTGCAGACTGGCGAC
CAACTCGCTGACATTTTAACGAAAGGACTGAGCAGAATAAAGTTTCAGAG
ACTTGAAAGTTTACTCATGTAATGCCAATTCAACTGAATACAGAGGCATG
GTAGGATCAATCATGTATGCCTCAACAGGAACTCGACCTGATCTGGGATA
CGCGGTACACCAAGCAGCACGTCGTGTGGAGGACCCATCTCGAGAAGACT
TCAGTACATACAAGCGCATTATTCATTATCTCAGTACCGTGCCTGACCTC
GGAATTACGTTCGGCGGTAAGAGCAATGGTCACGGTCTTAAAGGATTCGT
TAATGCCGACTGGGCGGGAAATATCGAGGACCGAAAGTCCACAACAGGAT
ACGTATTCAAGCTAAACGGCCGTGCGATAAGTTGGTGCTCCAGGAAGCAA
CAGTTAGTCACATGGTCCAATACAGAGGCAGAGTGCGTTGATGCAGGAGA
AGCAGGAAAGGAGGCGGTTTATCTTAAGGGGTTACTAGGATCGATAGATT
TCGGATGCAGCGGGGGCACGACATTGTTTGAGTACAACAAATCAGCTTTT
AATCTCAATAAGGGACCTAGCGTACACTGCAGGACAAACCACATCGGAGT
GCGCTGGCACGGAATTCGAGAGTGGATTTGGGAAGGAATATTGACGTTGA
ATTACGTGCAGACTGGCGACCAACTCGCTGACATTTTAACGAAAGGACTG
AGCAGAATAAAGTTTCAGAGACTTGAAAGTTTACTCATGTAA
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