mRNA_H-paniculata_contig4462.11253.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4462.11253.1
Unique NamemRNA_H-paniculata_contig4462.11253.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4462.11253.1 vs. uniprot
Match: D7FL55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL55_ECTSI)

HSP 1 Score: 624 bits (1608), Expect = 4.100e-198
Identity = 337/510 (66.08%), Postives = 377/510 (73.92%), Query Frame = 2 
Query:  107 GKTCMDISSLEINGVPKELTPLSWNIAGADILCLMACSLGYMALCLAIEYGKTFPKLRGILSPDPRVPIAPVPTQHSSGSNGYSLMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPRVEAENGAEVVLKGLRKVYRTKQGPKVAVHKLSFAVAKGDCFGFLGINGAGKSTTLGILSGDISPTTGEATIAGHDILTEQSKLRRYIGYCPQEDALLDLLTVQEHLLLYARIKGVEEDLLPKVAGEKMEQMDLCQFKRIKACELSGGNKRKLSVAIAMIGEPRVVFLDEPSTGMDPIARRFMWDIISRMTTKDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADMKLHRPSDAAAMEVLRVMQEKRLGPIIGQGLDRSRLVPPLDIYCRAMVQDGGTSARADAMEEALHSGSGAFLQDIIRSEGGTVPARLFIDWYLCEDRAADLEMFLNKTFPGTELVERPTLFSCRYKIAHQEGMTLADVFGHFEAAKTE 1636
            GKTC+D+ SL  + VPKELTP S  I GADI CLMA                                               S +E            +DEDVAAEA RV+ M    R + E G EV+L  LRKVYRTKQGPKVAV  LSF+VA+GDCFGFLGINGAGKSTTLGILSGDI PT G+A+IAGHDILTEQ++LRRYIGYCPQ+DALLDLLTV+EHLLLYARIKGV E+ +  VAGEKM+QMDL  F+  KA ELSGGNKRKLSVAIAMIG+PRVVFLDEPSTGMDPIARRFMWDIISRMTT DRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFG GFEADMKL  PS +AA EV++++    +  IIG  +D SRL  PLDI C  + +  G   RA+A+E AL SGSGAFLQD++ SEGGT+P RLFIDWYLCE RA DL +FL +TFPG ELVERPTLFSCRYKI +Q+GM LADVF HFEAAK +
Sbjct: 1710 GKTCVDVLSLGRDRVPKELTPFSAIITGADIACLMA-----------------------------------------------SCVE------------DDEDVAAEARRVEEMEGVLR-DGEGGGEVILNNLRKVYRTKQGPKVAVQGLSFSVARGDCFGFLGINGAGKSTTLGILSGDICPTRGKASIAGHDILTEQNQLRRYIGYCPQDDALLDLLTVEEHLLLYARIKGVNENRIGHVAGEKMQQMDLTSFRETKAFELSGGNKRKLSVAIAMIGDPRVVFLDEPSTGMDPIARRFMWDIISRMTTTDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGSGFEADMKLQPPSTSAATEVMQLLMAHGVANIIGDDIDSSRLWGPLDICCDGLAR--GDFDRAEALETALKSGSGAFLQDVLGSEGGTLPTRLFIDWYLCEQRADDLNVFLAETFPGAELVERPTLFSCRYKIPYQDGMKLADVFEHFEAAKAK 2157
[Close]
BLAST of mRNA_H-paniculata_contig4462.11253.1 vs. uniprot
Match: A0A6H5J891_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J891_9PHAE)

HSP 1 Score: 539 bits (1389), Expect = 2.100e-182
Identity = 306/517 (59.19%), Postives = 351/517 (67.89%), Query Frame = 2 
Query:  107 GKTCMDISSLEINGVPKELTPLSWNIAGADILCLMACSLGYMALCLAIEYGKTFPKLRGILSPDPRVPIAPVPTQHSSGSNGYSLMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPRVEAENGAEVVLKGLRKVYRTKQGPKVAVHKLSFAVAKGDCFGFLGINGAGKSTTLGILSGDI-------SPTTGEATIAGHDILTEQSKLRRYIGYCPQEDALLDLLTVQEHLLLYARIKGVEEDLLPKVAGEKMEQMDLCQFKRIKACELSGGNKRKLSVAIAMIGEPRVVFLDEPSTGMDPIARRFMWDIISRMTTKDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADMKLHRPSDAAAMEVLRVMQEKRLGPIIGQGLDRSRLVPPLDIYCRAMVQDGGTSARADAMEEALHSGSGAFLQDIIRSEGGTVPARLFIDWYLCEDRAADLEMFLNKTFPGTELVERPTLFSCRYKIAHQEGMTLADVFGHFEAAKTE 1636
            GKTC+D+ SL  + VPKELTP S  I GADI CLMA  +GY+ +CLAIEYG+T PKL G L PDP+        +HS                 TD   +DEDVAAEA RV+ M    R + E G E              GPKVAV  LSF+VA+GDCFGFLGINGAG+                  +   G +  AG  +       +R  G   ++        V+EHLLLYARIKGV E+ +  VAGEKM+QMDL  F+  KA ELSGGNKRKLSVAIAMIG+PRVVFLDEPSTGMDPIARRFMWDIISRMTT DRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFG GFEADMKL  PS AAA EV++++    +  IIG  +D SRL  PLDI C  + +  G   RA+A+E AL  GSGAFLQD++ SEGGT+P RLFIDWYLCE RA +L  FL +TFPG ELVERPTLFSCRYKI +Q+GM LADVF HFEAAK +
Sbjct:   36 GKTCVDVLSLGRDRVPKELTPFSTIITGADIACLMASCVGYLVICLAIEYGQTSPKLLGWLRPDPKT------DRHSD----------------TDPEEDDEDVAAEARRVEEMEGVLR-DGEGGGE--------------GPKVAVQGLSFSVARGDCFGFLGINGAGEQPNAHTSKESTHVDKMFSARKRGRSGNAGRQVPKAYHNYQRQYGADHRQYG-----EVEEHLLLYARIKGVNENRIGHVAGEKMQQMDLTPFRETKAFELSGGNKRKLSVAIAMIGDPRVVFLDEPSTGMDPIARRFMWDIISRMTTTDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGSGFEADMKLQPPSTAAATEVMQLLMAHGVANIIGDDIDSSRLWGPLDICCDGLAR--GDFDRAEALETALKCGSGAFLQDVLGSEGGTLPTRLFIDWYLCEQRADNLNDFLEETFPGAELVERPTLFSCRYKIPYQDGMKLADVFEHFEAAKAK 508
[Close]
BLAST of mRNA_H-paniculata_contig4462.11253.1 vs. uniprot
Match: A0A7R9U9S9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9S9_9STRA)

HSP 1 Score: 375 bits (963), Expect = 2.020e-113
Identity = 244/528 (46.21%), Postives = 310/528 (58.71%), Query Frame = 2 
Query:  107 GKTCMDISSLEINGVPKELTPLSWNIAGADILCLMACSLGYMALCLAIEYGKTFPKLRGIL--SPDPRVPIAPVPTQHSSGSNGYSLMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPRVEAENGAE---VVLKGLRKVYRTKQGPKVAVHKLSFAVAKGDCFGFLGINGAGKSTTLGILSGDISPTTGEATIAGHDILTEQSKLRRYIGYCPQEDALLDLLTVQEHLLLYARIKGVEE-DLLPKVAGEKMEQMDLCQFKRIKACELSGGNKRKLSVAIAMIGEPRVVFLDEPSTGMDPIARRFMWDIISRMTTKDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADMKLHRPSDAAAMEVLRVMQEKRLGPIIGQGLDRSRLVP-PLDIYCRAMVQDGGTSARAD-----AMEEALHSGSGAFLQDIIRSEGGTVPARLFIDWYLCEDRAADLEMFLNKTFPGTELVERPTLFSCRYKIAHQEGMTLADVFGHFEAAKTEAARLCI 1654
            GK C  ++  E   + K   P   ++ G +++ LM   + Y+A+ L IEY   FP +      + DP+ P                             L EDEDVAAEA RV           + GA+   V L+ LRKV+ T  GPKVAV KLSF + +G+CFGFLGINGAGKSTTL ILSG+  PT+G A IAG DI   Q K+RR IGYCPQ DALL+LLTV+EHL LYARIKGV E DL+ +V   K++QMDL  F    A  LSGGNKRKLSVAIAMIG P +VFLDEPSTGMDP+ARRFMWD+IS ++T+  +CSVILTTHSMEEAE+LC  IGIMVNG  +CLG  Q LK RFG G++ D+K      +      R+++E  L        D  R+V     +   A  QD  T   +      AM++    G GA +  +++SEG  + A   + +++ E R A +  FL+  FP  +LVE  T+FS R++I  Q G  LAD F  FE AK    RLCI
Sbjct:  502 GKDCYVVTK-EGYELGKMAGPFHLDVVGTNVVYLMVEIVVYLAITLGIEYSLQFPMILRFWQRTRDPQDPRG---------------------------LYEDEDVAAEANRV----------LDGGADGDVVCLRQLRKVFPTPVGPKVAVRKLSFGIPRGECFGFLGINGAGKSTTLSILSGEFPPTSGTAYIAGFDIQHNQGKIRRRIGYCPQFDALLELLTVREHLELYARIKGVPEGDLMERVVQGKLKQMDLNAFADKAAGSLSGGNKRKLSVAIAMIGGPSIVFLDEPSTGMDPVARRFMWDVISNLSTRGGKCSVILTTHSMEEAEALCTRIGIMVNGGFKCLGGAQRLKERFGGGYDVDIKFSLFERSEVEAGCRLLREAGLLTYPVSDEDFGRVVDIRASLLHLAESQDLETGKASGENVDLAMDQIDPVGRGAEISVLLQSEGA-IDAAALVQFWMAEQRLAMMFAFLSNGFPMWKLVETKTIFSHRFRI--QTGNGLADTFDRFEDAKV---RLCI 985
[Close]
BLAST of mRNA_H-paniculata_contig4462.11253.1 vs. uniprot
Match: A0A662WCS5_9STRA (ABC transporter domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WCS5_9STRA)

HSP 1 Score: 340 bits (873), Expect = 8.110e-105
Identity = 218/509 (42.83%), Postives = 299/509 (58.74%), Query Frame = 2 
Query:  167 PLSWNIAGADILCLMACSLGYMALCLAIEYGKTFPKLRGILSPDPRVPIAPVPTQHSSGSNGYSLMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPRVEAENGAEVVLKGLRKVYRTKQGPKVAVHKLSFAVAKGDCFGFLGINGAGKSTTLGILSGDISPTTGEATIAGHDILTEQSKLRRYIGYCPQEDALLDLLTVQEHLLLYARIKGVEEDLLPKVAGEKMEQMDLCQFKRIKACELSGGNKRKLSVAIAMIGEPRVVFLDEPSTGMDPIARRFMWDIISRMTTKDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADMKLHRP--SDAAAMEVLRVMQEKRLGPIIGQGLDRSRLVPPLDIYCRAMVQDGGTSARADAMEEALHSGSGAFLQDIIRSEGGTVPARLFIDWYLCEDRAADLEMFLNKTFPGTELVERPTLFSCRYKIAHQEG---------------MTLADVFGHFEAAKTEAA 1642
            P +    G +I+ L+  ++ Y A+ + I+Y  TFPK +  +S DP +P+                       +  D+   D DV AE  RV  +       A+N A + L+ LRKVYR  +G KVAV  LSF +  G+CFGFLGINGAGK++T+ +L+GDI PT+G AT++G DILT+Q ++RR IGYCPQ DAL+DLLTV+EHL L+A+IKGV   +L +V  EKMEQ++L  F+   A  LSGGNKRKLSVAIAMIG P+++FLDEPSTGMDP++RRFMWDIIS ++T  +E +V+LTTHSMEE E+LC  +GIMV G L+CLGS QHLK RFG G   D KL  P   D +A+ VLR          +   +D  +L     ++ +A  +   T+             +G  + +  + +G  V A  F  W++ E +  ++  FL K F   EL+ER    SC +KI  Q G               + L++VF   E AKT+ A
Sbjct:   72 PFALENTGYEIIYLLFDAVLYFAIAVGIDYAMTFPKFKAAMSKDPSIPL-----------------------ERGDV---DADVGAEEERV--LMGG----ADNDA-IKLQNLRKVYR--KGEKVAVENLSFGLKHGECFGFLGINGAGKTSTMKMLTGDIVPTSGNATLSGFDILTQQVQVRRQIGYCPQFDALIDLLTVREHLELFAKIKGVPNAVLNEVVIEKMEQLNLMAFEDKLAGSLSGGNKRKLSVAIAMIGAPKILFLDEPSTGMDPVSRRFMWDIISEISTYSKESTVVLTTHSMEECEALCTRVGIMVGGGLKCLGSVQHLKTRFGDGLMFDAKLQVPLTEDVSAL-VLRHFDS------LETRIDEDQLAETCRLFGKAAWEQKITNTHP----------TGHTIANFAKRDG-YVLASSFAAWWITETQFDNVSSFLEKNFGAVELLERKH-DSCWFKIHGQSGHGAAFGGSGAQADSTLRLSNVFDLVENAKTQLA 526
[Close]
BLAST of mRNA_H-paniculata_contig4462.11253.1 vs. uniprot
Match: A0A1V9Z365_9STRA (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z365_9STRA)

HSP 1 Score: 352 bits (903), Expect = 3.010e-103
Identity = 221/496 (44.56%), Postives = 297/496 (59.88%), Query Frame = 2 
Query:  176 WNIAGADILCLMACSLGYMALCLAIEYGKTFPKLRGILSPDPRVPIAPVPTQHSSGSNGYSLMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPRVEAENGAE---VVLKGLRKVYRTKQGPKVAVHKLSFAVAKGDCFGFLGINGAGKSTTLGILSGDISPTTGEATIAGHDILTEQSKLRRYIGYCPQEDALLDLLTVQEHLLLYARIKGVEEDLLPKVAGEKMEQMDLCQFKRIKACELSGGNKRKLSVAIAMIGEPRVVFLDEPSTGMDPIARRFMWDIISRMTTKDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADMKLHRPSDAAAMEVLRVMQEKRLGPIIG--QGLDRSRLVPPLDIYCRAMVQD--GGTSARADAMEEALHSGSGAFLQDIIRSEGGTVPARLFIDWYLCEDRAADLEMFLNKTFPGTELVERPTLFSCRYKIAHQEG----MTLADVFGHFEAAK 1630
            +++AG +I+ L   S+ + +L L I+   +FPK + + + DP++P A         +N                +VED DVAAEA RV           E  A+   VV+K L+KVY    G K+AV  LSFA+ KG+CFG+LGINGAGK+TT+ +L+GDI PT+G AT+ G DILT+Q +LRR IGYCPQ DAL++LL+V+EHL L+A+IKGV    +  V  EK+ QM+L  F+   A  LSGGNKRKLSVAIAMIG P ++FLDEPSTGMDP++RRFMWDII+ ++T ++E +++LTTHSMEE E+LC  +GIMV GRLRCLGS QHLK RFG G   D KL+ PS     ++L     +R+ P+     GLD           C  + Q   G   A+  A   AL         D +    G V   LF  W++ ED+ +  + FL KTF   EL+ER     CR+K+   +     + L+DVF   EA K
Sbjct:  752 YDMAGTEIIFLAVQSIIFFSLALGIDVLLSFPKFKAMFTRDPQLPDA---------AN----------------IVEDPDVAAEATRV----------LEGRADKDMVVIKRLKKVYT---GNKIAVRNLSFALPKGECFGYLGINGAGKTTTMKMLTGDILPTSGGATLGGFDILTQQLELRRLIGYCPQFDALIELLSVREHLELFAKIKGVPAADVAVVVKEKLTQMNLQSFEHKLAGTLSGGNKRKLSVAIAMIGSPPIIFLDEPSTGMDPVSRRFMWDIIADVSTANKESTIVLTTHSMEECEALCTRVGIMVGGRLRCLGSVQHLKSRFGDGLMVDSKLNVPSP----QLLADFFSRRVKPVCTAVSGLDGLLTRDQTMKLCGDLGQPERGAWIAKNHATGYAL---------DAVLERDGKVAVSLFCSWWVGEDQFSAYDAFLQKTFARVELLERQNEH-CRFKLHDNKSSGSTLLLSDVFAKMEANK 1195
[Close]
BLAST of mRNA_H-paniculata_contig4462.11253.1 vs. uniprot
Match: M4C4G7_HYAAE (ABC transporter domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4G7_HYAAE)

HSP 1 Score: 333 bits (855), Expect = 2.940e-102
Identity = 215/492 (43.70%), Postives = 285/492 (57.93%), Query Frame = 2 
Query:  164 TPLSWNIAGADILCLMACSLGYMALCLAIEYGKTFPKLRGILSPDPRVPIAPVPTQHSSGSNGYSLMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPRVEAENGAEVVLKGLRKVYRTKQGPKVAVHKLSFAVAKGDCFGFLGINGAGKSTTLGILSGDISPTTGEATIAGHDILTEQSKLRRYIGYCPQEDALLDLLTVQEHLLLYARIKGVEEDLLPKVAGEKMEQMDLCQFKRIKACELSGGNKRKLSVAIAMIGEPRVVFLDEPSTGMDPIARRFMWDIISRMTTKDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADMKLHRPSDAAAMEVLRVMQEKRLGPIIGQGLDRSRLVPPLDIYCRAMVQDGGTSARADAMEEALHSGSGAFLQDIIRSEGGTVPARLFIDWYLCEDRAADLEMFLNKTFP--GTELVERPTLFSCRYKI-AHQEGMTLADVFGHFEAAK 1630
            +P S +I G +++ L   ++ Y  L + I+Y  TFPK++  +S                   G  + +        D   ED DV  EA RV S  +       +G  V L GLRKVYR   G KVAV  LSF + +G+CFGFLGINGAGK+TT+ +L+GD  PT G AT+ G DILT+Q ++RR IGYCPQ DAL +LLTV+EHL L+A IKGV    L +   EK++QM+L  F+   A  LSGGNKRKLSVAIAMIG+PR+VFLDEPSTGMDP++RRFMWD+I+ ++T+ +  +++LTTHSMEE+E+LC+ +GIMV GRLRCLGS QHLK RFG G   D+KL  P+     + L  + ++  G    + + R  L    D  C A    G   A+  A       G  A L+       G V A  F+ W L E R   L  FL  +F      ++ER   F CR+K+    E + L+ VF   E  K
Sbjct:   91 SPFSTDIMGWEMIFLFFTAILYGLLAVLIDYSMTFPKVKDWMS------------------GGDDVQD--------DPFEEDVDVLKEAQRVASGEA-------DGDVVKLAGLRKVYR---GGKVAVRNLSFGLKRGECFGFLGINGAGKTTTMKMLTGDELPTHGTATLGGFDILTQQVEVRRQIGYCPQFDALFELLTVREHLELFASIKGVRRSRLNEAVAEKIKQMNLGDFENKLAGSLSGGNKRKLSVAIAMIGDPRIVFLDEPSTGMDPVSRRFMWDVIASISTRGKNSTIVLTTHSMEESEALCSRVGIMVGGRLRCLGSVQHLKSRFGDGLVVDVKLATPTQ----QELGDLMQQNYGDA-NENITRDNL----DDKCNAFGNQG--LAQRVAASHPTGYGLAAILE-----RDGYVKAESFLSWCLEETRFDTLYDFLAHSFSHGSVAVMERQNDF-CRFKLHGSNEELRLSKVFALVEGVK 529
[Close]
BLAST of mRNA_H-paniculata_contig4462.11253.1 vs. uniprot
Match: T0S2C2_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S2C2_SAPDV)

HSP 1 Score: 353 bits (905), Expect = 1.140e-101
Identity = 224/525 (42.67%), Postives = 306/525 (58.29%), Query Frame = 2 
Query:   98 VSRGKTCMDISSLEINGVPKELTPLS---WNIAGADILCLMACSLGYMALCLAIEYGKTFPKLRGILSPDPRVPIAPVPTQHSSGSNGYSLMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPRVEAENGAEVVLKGLRKVYRTKQGPKVAVHKLSFAVAKGDCFGFLGINGAGKSTTLGILSGDISPTTGEATIAGHDILTEQSKLRRYIGYCPQEDALLDLLTVQEHLLLYARIKGVEEDLLPKVAGEKMEQMDLCQFKRIKACELSGGNKRKLSVAIAMIGEPRVVFLDEPSTGMDPIARRFMWDIISRMTTKDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADMKLHRPS-----DAAAMEVLRVMQEKRLGPIIGQGLDRSRLVPPLDIYCRAMVQDGGTSARADAMEEALHSGSGAFLQDIIRSEGGTVPARLFIDWYLCEDRAADLEMFLNKTFPGTELVERPTLFSCRYKI--AHQEGMTLADVFGHFEAAKTEAA 1642
            +  G   M + SL +  +    T +S   W+IAG +I+ L   S+ +  L L I+   +FP+++ I S DP++ +                          D  V+DEDVAAEA RV    +   +       +V+K L+KVY    G KVAV  LSFA+ KG+CFG+LGINGAGK+TT+ +L+GDI PT G AT+ G DILT+Q +LRR IGYCPQ DAL++LL+V+EHL L+A+IKGV    +  V  EK+ QM+L  F+   A  LSGGNKRKLSVAIAMIG P ++FLDEPSTGMDP++RRFMWDII+ ++T ++E +++LTTHSMEE E+LC  +GIMV GRLRCLGS QHLK RFG G   D KL+ PS     D  A  V  V Q  +    +   L R ++          +  D G S RA  + ++  +G   +  D +      V   LF  W++ E++    + FL  TF   EL+ER     CR+K+  +    + L+DVF   EA K + A
Sbjct: 1432 LGNGLLTMSLKSL-VGAITNSKTVVSAYDWDIAGTEIIYLALESVVFFGLALGIDVLLSFPRIKAIFSRDPQLDVK-------------------------DDHVDDEDVAAEAKRVLDGLADKDM-------IVIKRLKKVYT---GNKVAVRNLSFALPKGECFGYLGINGAGKTTTMKMLTGDILPTGGAATLGGFDILTQQLELRRLIGYCPQFDALIELLSVREHLELFAKIKGVPSADIAGVVKEKLTQMNLQSFEHKLAGTLSGGNKRKLSVAIAMIGSPPIIFLDEPSTGMDPVSRRFMWDIIADVSTANKESTIVLTTHSMEECEALCTRVGIMVGGRLRCLGSVQHLKSRFGDGLMIDSKLNVPSPVQLGDFFARSVQPVCQAAK---DLETHLSRDQITK--------LCGDLGQSDRAGWIAKSHSTG---YALDAVLERDSNVSLSLFCAWWVGENQFVAYDSFLRSTFARVELLERQNEH-CRFKLHDSVDAKLKLSDVFAKMEAHKVDVA 1905
[Close]
BLAST of mRNA_H-paniculata_contig4462.11253.1 vs. uniprot
Match: V9FKV9_PHYPR (ABC transporter domain-containing protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9FKV9_PHYPR)

HSP 1 Score: 334 bits (856), Expect = 2.880e-101
Identity = 211/498 (42.37%), Postives = 296/498 (59.44%), Query Frame = 2 
Query:  155 KELTPLSWNIAGADILCLMACSLGYMALCLAIEYGKTFPKLRGILSPDPRVPIAPVPTQHSSGSNGYSLMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPRVEAENGAEVVLKGLRKVYRTKQGPKVAVHKLSFAVAKGDCFGFLGINGAGKSTTLGILSGDISPTTGEATIAGHDILTEQSKLRRYIGYCPQEDALLDLLTVQEHLLLYARIKGVEEDLLPKVAGEKMEQMDLCQFKRIKACELSGGNKRKLSVAIAMIGEPRVVFLDEPSTGMDPIARRFMWDIISRMTTKDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADMKLHRPSDAAAMEVLRVMQEKRLGPIIGQGLDRSRLVPP-LDIYCRAMVQDGGTSARADAMEEALHSGSGAFLQDIIRSEGGTVPARLFIDWYLCEDRAADLEMFLNKTFP--GTELVERPTLFSCRYKIAHQEGMT-LADVFGHFEAAKTE 1636
            ++ +P S +I G +++ L+  ++ YM + + ++Y KTF K+  + + +             S S  + +               DEDV  EAVRV S  +       +G  V L GLRKVY    G KVAV  LSF + +G+CFGFLGINGAGK+TT+ +L+GD++P+ G AT+ G+DILT+Q ++RR IGYCPQ DAL DLLTV+EHL L+  IKG+ +  + +V  EK++Q++L  F+   A  LSGGNKRKLSVAIAMIG P ++FLDEPSTGMDP++RRFMWD+I+ ++T+ +E +++LTTHSMEE+E+LC+ +GIMV GRLRCLGS QHLK RFG G   D+KL    DA  ++ L  + +     I GQ     R+ P  LD  CRA       + R  A     +S + A  +D      G + A  F  W + E R   L  +L   F   G  ++ER   F CR+K+    G   L+ +F   E  KT+
Sbjct:  186 EKTSPFSTDIMGFELIFLLLTAIAYMIIAVRLDYVKTFAKVTDVNTDE-------------SFSGDHEI---------------DEDVEKEAVRVASGGA-------DGDAVKLAGLRKVY---PGGKVAVRDLSFGLKRGECFGFLGINGAGKTTTMKMLTGDVAPSRGTATLGGYDILTQQLEVRRQIGYCPQFDALFDLLTVREHLELFGAIKGIPQASIDRVVKEKIQQLNLGDFEHKLAGSLSGGNKRKLSVAIAMIGNPAIIFLDEPSTGMDPVSRRFMWDVIADISTRGKESTIVLTTHSMEESEALCSRVGIMVGGRLRCLGSVQHLKTRFGDGVVFDVKL----DAPTVDELEYLVQH----IFGQ--QDQRVSPEQLDGKCRAFGYPE-LADRVTASHPTGYSLAAAMKRD------GFIRAVAFCSWCVEETRFDALNEYLTTAFGPNGVLVMERQNDF-CRFKVRGSNGQVKLSKMFALVEGVKTK 627
[Close]
BLAST of mRNA_H-paniculata_contig4462.11253.1 vs. uniprot
Match: A0A7S1CQA7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQA7_9STRA)

HSP 1 Score: 348 bits (893), Expect = 3.150e-101
Identity = 225/497 (45.27%), Postives = 290/497 (58.35%), Query Frame = 2 
Query:  167 PLSWNIAGADILCLMACSLGYMALCLAIEYGKTFPKLRGILSPDPRVPIAPVPTQHSSGSNGYSLMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPRVEAENGAEVVLKGLRKVYRTKQGPKVAVHKLSFAVAKGDCFGFLGINGAGKSTTLGILSGDISPTTGEATIAGHDILTEQSKLRRYIGYCPQEDALLDLLTVQEHLLLYARIKGVEEDLLPKVAGEKMEQMDLCQFKRIKACELSGGNKRKLSVAIAMIGEPRVVFLDEPSTGMDPIARRFMWDIISRMTTKDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADMKLHRPSDAAAMEVLRVMQEKRLGPIIGQGLDRSRLVPPLDIYCRAMVQDGGTSARADAMEEALHSGSGAFLQDIIRSEGGTVPARLFIDWYLCEDRAADLEMFLNKTFPGTELVERP-TLFSCRYKIAHQEGMTLADVFGHFEAAKTEAARLCI 1654
            P    + G +I  L   ++ Y AL +AI+ G ++P +R  + PD  VP   V                          VEDEDVA E  RV    +S R    N   +VLK LRKVY    G K AV  LSF +  G  FGFLGINGAGK++TLGILSG + PT+G AT+AG DILT+Q ++RR +GYCPQ DALLDLLTV+EHL L+A IKGV ED +  V  +K+  M L QF    A  LSGGNKRKLSVAIAMIG+P ++FLDEPSTGMDP+ARRFMW++I+ +  +    S++LTTHSMEE E+LC+ +GIMV GRLRCLGS QHLK RFG+G+ A+++L  P +    ++L      R+ P    G      VP L   CR +    G S RA      +H  S  +L        G V   +F +W+  E +AA L  F+ ++F   ELVER   LF  RY++    G  L+ +FG  E  +    RLCI
Sbjct:  832 PFDMFVTGTNITYLAFEAVLYFALAVAIDVGLSYPSVRARVMPDKDVPEKSV--------------------------VEDEDVARERQRV----ASGRA---NDDLIVLKNLRKVYG---GRKAAVRGLSFGIPSGQVFGFLGINGAGKTSTLGILSGKLLPTSGSATLAGLDILTQQVEVRRLLGYCPQFDALLDLLTVREHLELFAHIKGVPEDEVADVVSDKIADMQLSQFANKCAGTLSGGNKRKLSVAIAMIGDPPLLFLDEPSTGMDPVARRFMWNLIASVAAERERVSIVLTTHSMEECEALCSRVGIMVGGRLRCLGSVQHLKQRFGKGYLAEIRLEDPDEDVVKDILH-----RIEPYCANGRVPWDQVPTL---CREL----GDSRRA----LMIHPNSSGWLLANHFQREGFVDDTVFAEWWAAETQAAVLHTFVVRSFARCELVERHGELF--RYRL-RDGGQALSAIFGVIEDNRE---RLCI 1270
[Close]
BLAST of mRNA_H-paniculata_contig4462.11253.1 vs. uniprot
Match: G4YI13_PHYSP (ABCA1 lipid exporter n=4 Tax=Phytophthora TaxID=4783 RepID=G4YI13_PHYSP)

HSP 1 Score: 351 bits (900), Expect = 5.430e-101
Identity = 223/506 (44.07%), Postives = 302/506 (59.68%), Query Frame = 2 
Query:  167 PLSWNIAGADILCLMACSLGYMALCLAIEYGKTFPKLRGILSPDPRVPIAPVPTQHSSGSNGYSLMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPRVEAENGAEVVLKGLRKVYRTKQGPKVAVHKLSFAVAKGDCFGFLGINGAGKSTTLGILSGDISPTTGEATIAGHDILTEQSKLRRYIGYCPQEDALLDLLTVQEHLLLYARIKGVEEDLLPKVAGEKMEQMDLCQFKRIKACELSGGNKRKLSVAIAMIGEPRVVFLDEPSTGMDPIARRFMWDIISRMTTKDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADMKLHRPSDAAAME-VLRVMQEKRLGPIIGQGLDRSRLVPPLDIYCRAMVQDGGTSARADAMEEALHSGSGAFLQDIIRSEGGTVPARLFIDWYLCEDRAADLEMFLNKTFPGTELVERPTLFSCRYKI-------AHQEGMTLADVFGHFEAAKTEAARLCIRK 1660
            P +    G +I+ L+  +  Y AL + I+Y   FPK++  LS DP +P+A     H                      V DEDV AE  RV  M       A+N   + L+ LRKVYR  +G KVAV  LSF + +G+CFGFLGINGAGK+TT+ +L+GDI PT+G AT++G DILT+Q ++RR IGYCPQ DAL+DLLTV+EHL L+A+IKGV    L  V  EKMEQ++L  F+   A  LSGGNKRKLSVAIAMIG P+++FLDEPSTGMDP++RRFMWD+IS ++T ++E +V+LTTHSMEE E+LC  +GIMV G L+CL S QHLK+RFG G   D KL  PS  A  E VLR          +G  +D+  L     ++        G ++ A  +     +G    + ++ + +G  V    F  W++ E +  ++  FL ++F   EL+ER    SC +KI       +H   + L++VF   E AKT   RL IR+
Sbjct: 1481 PFALENTGYEIIYLLIDAALYYALAVGIDYALNFPKIKSALSKDPDIPVA-----HR---------------------VIDEDVGAEVDRV--MLGG----ADNDT-IKLQNLRKVYR--KGQKVAVQDLSFGLRQGECFGFLGINGAGKTTTMKMLTGDIVPTSGNATLSGFDILTQQVEVRRQIGYCPQFDALIDLLTVREHLELFAKIKGVSSADLDFVVSEKMEQLNLTAFEDKLAGSLSGGNKRKLSVAIAMIGSPKILFLDEPSTGMDPVSRRFMWDVISEISTYNKESTVVLTTHSMEECEALCTRVGIMVGGELKCLASVQHLKNRFGDGLMFDAKLQVPSAEAVSELVLRRFDS------LGTRIDQDDLTETCQLF--------GNASWAQKIVNTHPTGHA--IANLAKRDG-YVSTSSFAAWWITETQFENVAAFLQQSFGAFELLERQN-DSCWFKILDQSTGDSHNRALRLSNVFEVVENAKT---RLSIRE 1930
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4462.11253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL55_ECTSI4.100e-19866.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J891_9PHAE2.100e-18259.19ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7R9U9S9_9STRA2.020e-11346.21Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A662WCS5_9STRA8.110e-10542.83ABC transporter domain-containing protein n=1 Tax=... [more]
A0A1V9Z365_9STRA3.010e-10344.56ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ach... [more]
M4C4G7_HYAAE2.940e-10243.70ABC transporter domain-containing protein n=1 Tax=... [more]
T0S2C2_SAPDV1.140e-10142.67Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
V9FKV9_PHYPR2.880e-10142.37ABC transporter domain-containing protein n=1 Tax=... [more]
A0A7S1CQA7_9STRA3.150e-10145.27Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
G4YI13_PHYSP5.430e-10144.07ABCA1 lipid exporter n=4 Tax=Phytophthora TaxID=47... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4462contigH-paniculata_contig4462:1462..15779 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score626.3
Seed ortholog evalue1.4e-176
Seed eggNOG ortholog2880.D7FL55
KEGG koko:K05643,ko:K05645
KEGG TC3.A.1.211
KEGG Pathwayko02010,map02010
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006869,GO:0008150,GO:0009653,GO:0010876,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030587,GO:0031090,GO:0031288,GO:0032502,GO:0033036,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048856,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0071702,GO:0090702,GO:0098588,GO:0098805,GO:0099120
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0059@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons15
Model size2135
Cds size1698
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930341.8467247-UTR-H-paniculata_contig4462:1461..18161622930341.8467247-UTR-H-paniculata_contig4462:1461..1816Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4462 1462..1816 -
1691481249.3385909-UTR-H-paniculata_contig4462:1461..18161691481249.3385909-UTR-H-paniculata_contig4462:1461..1816Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4462 1462..1816 -
1622930342.1496377-UTR-H-paniculata_contig4462:15697..157791622930342.1496377-UTR-H-paniculata_contig4462:15697..15779Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4462 15698..15779 -
1691481249.5455873-UTR-H-paniculata_contig4462:15697..157791691481249.5455873-UTR-H-paniculata_contig4462:15697..15779Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4462 15698..15779 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930341.865206-CDS-H-paniculata_contig4462:1816..19601622930341.865206-CDS-H-paniculata_contig4462:1816..1960Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 1817..1960 -
1691481249.3553164-CDS-H-paniculata_contig4462:1816..19601691481249.3553164-CDS-H-paniculata_contig4462:1816..1960Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 1817..1960 -
1622930341.8886678-CDS-H-paniculata_contig4462:5711..58181622930341.8886678-CDS-H-paniculata_contig4462:5711..5818Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 5712..5818 -
1691481249.3651738-CDS-H-paniculata_contig4462:5711..58181691481249.3651738-CDS-H-paniculata_contig4462:5711..5818Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 5712..5818 -
1622930341.9055831-CDS-H-paniculata_contig4462:6170..62501622930341.9055831-CDS-H-paniculata_contig4462:6170..6250Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 6171..6250 -
1691481249.376995-CDS-H-paniculata_contig4462:6170..62501691481249.376995-CDS-H-paniculata_contig4462:6170..6250Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 6171..6250 -
1622930341.9217625-CDS-H-paniculata_contig4462:6971..70611622930341.9217625-CDS-H-paniculata_contig4462:6971..7061Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 6972..7061 -
1691481249.3863397-CDS-H-paniculata_contig4462:6971..70611691481249.3863397-CDS-H-paniculata_contig4462:6971..7061Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 6972..7061 -
1622930341.9380443-CDS-H-paniculata_contig4462:8127..81961622930341.9380443-CDS-H-paniculata_contig4462:8127..8196Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 8128..8196 -
1691481249.3954701-CDS-H-paniculata_contig4462:8127..81961691481249.3954701-CDS-H-paniculata_contig4462:8127..8196Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 8128..8196 -
1622930341.9597425-CDS-H-paniculata_contig4462:8783..89561622930341.9597425-CDS-H-paniculata_contig4462:8783..8956Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 8784..8956 -
1691481249.414207-CDS-H-paniculata_contig4462:8783..89561691481249.414207-CDS-H-paniculata_contig4462:8783..8956Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 8784..8956 -
1622930341.974988-CDS-H-paniculata_contig4462:9484..96211622930341.974988-CDS-H-paniculata_contig4462:9484..9621Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 9485..9621 -
1691481249.4266715-CDS-H-paniculata_contig4462:9484..96211691481249.4266715-CDS-H-paniculata_contig4462:9484..9621Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 9485..9621 -
1622930341.9977665-CDS-H-paniculata_contig4462:10080..101771622930341.9977665-CDS-H-paniculata_contig4462:10080..10177Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 10081..10177 -
1691481249.4388802-CDS-H-paniculata_contig4462:10080..101771691481249.4388802-CDS-H-paniculata_contig4462:10080..10177Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 10081..10177 -
1622930342.0179088-CDS-H-paniculata_contig4462:10677..107941622930342.0179088-CDS-H-paniculata_contig4462:10677..10794Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 10678..10794 -
1691481249.4501545-CDS-H-paniculata_contig4462:10677..107941691481249.4501545-CDS-H-paniculata_contig4462:10677..10794Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 10678..10794 -
1622930342.0454504-CDS-H-paniculata_contig4462:12261..123241622930342.0454504-CDS-H-paniculata_contig4462:12261..12324Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 12262..12324 -
1691481249.461286-CDS-H-paniculata_contig4462:12261..123241691481249.461286-CDS-H-paniculata_contig4462:12261..12324Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 12262..12324 -
1622930342.0728521-CDS-H-paniculata_contig4462:12999..130911622930342.0728521-CDS-H-paniculata_contig4462:12999..13091Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 13000..13091 -
1691481249.4729013-CDS-H-paniculata_contig4462:12999..130911691481249.4729013-CDS-H-paniculata_contig4462:12999..13091Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 13000..13091 -
1622930342.0905273-CDS-H-paniculata_contig4462:13352..134341622930342.0905273-CDS-H-paniculata_contig4462:13352..13434Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 13353..13434 -
1691481249.4844048-CDS-H-paniculata_contig4462:13352..134341691481249.4844048-CDS-H-paniculata_contig4462:13352..13434Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 13353..13434 -
1622930342.1047103-CDS-H-paniculata_contig4462:13751..140561622930342.1047103-CDS-H-paniculata_contig4462:13751..14056Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 13752..14056 -
1691481249.495428-CDS-H-paniculata_contig4462:13751..140561691481249.495428-CDS-H-paniculata_contig4462:13751..14056Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 13752..14056 -
1622930342.1171618-CDS-H-paniculata_contig4462:14512..146301622930342.1171618-CDS-H-paniculata_contig4462:14512..14630Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 14513..14630 -
1691481249.5065432-CDS-H-paniculata_contig4462:14512..146301691481249.5065432-CDS-H-paniculata_contig4462:14512..14630Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 14513..14630 -
1622930342.1337519-CDS-H-paniculata_contig4462:15673..156971622930342.1337519-CDS-H-paniculata_contig4462:15673..15697Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 15674..15697 -
1691481249.5295613-CDS-H-paniculata_contig4462:15673..156971691481249.5295613-CDS-H-paniculata_contig4462:15673..15697Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4462 15674..15697 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4462.11253.1prot_H-paniculata_contig4462.11253.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4462 1817..15697 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4462.11253.1

>prot_H-paniculata_contig4462.11253.1 ID=prot_H-paniculata_contig4462.11253.1|Name=mRNA_H-paniculata_contig4462.11253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=566bp
MGVQAVSRGKTCMDISSLEINGVPKELTPLSWNIAGADILCLMACSLGYM
ALCLAIEYGKTFPKLRGILSPDPRVPIAPVPTQHSSGSNGYSLMESSTAV
DSTDLLVEDEDVAAEAVRVDSMFSSPRVEAENGAEVVLKGLRKVYRTKQG
PKVAVHKLSFAVAKGDCFGFLGINGAGKSTTLGILSGDISPTTGEATIAG
HDILTEQSKLRRYIGYCPQEDALLDLLTVQEHLLLYARIKGVEEDLLPKV
AGEKMEQMDLCQFKRIKACELSGGNKRKLSVAIAMIGEPRVVFLDEPSTG
MDPIARRFMWDIISRMTTKDRECSVILTTHSMEEAESLCNNIGIMVNGRL
RCLGSTQHLKHRFGRGFEADMKLHRPSDAAAMEVLRVMQEKRLGPIIGQG
LDRSRLVPPLDIYCRAMVQDGGTSARADAMEEALHSGSGAFLQDIIRSEG
GTVPARLFIDWYLCEDRAADLEMFLNKTFPGTELVERPTLFSCRYKIAHQ
EGMTLADVFGHFEAAKTEAARLCIRKGERGALPRNRSVVETVSRTSRRRS
SRNRRRTSRSRRRSC*
back to top

mRNA from alignment at H-paniculata_contig4462:1462..15779-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4462.11253.1 ID=mRNA_H-paniculata_contig4462.11253.1|Name=mRNA_H-paniculata_contig4462.11253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14318bp|location=Sequence derived from alignment at H-paniculata_contig4462:1462..15779- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGTGACTGGCCTTGCTTTGATGGTGACGTCCTTCGTGCTCAACCTGGTA
GAATCTACGAGGGATATCAATGCGAAATTGAAATGGGTGTACAGGCTGTT
TCCAGGGTAAGCAGTCTCAGAGGACGTCGTTCAGTGACCGACAGGGGGTG
AGGTGTAAACATTCCGGAAAATTCCCTAAGGGGAGAAGAATATTATATTA
TCCAATATTGTAATACGCCTTTATCCAATATTGTAAGACAATAGTTCGAT
ACGGCCAATGACGGTGGACCCTAACAAAGTAAATCAAGTAACAAAATGGA
TCAATATCGACAAAACAAAGTTTGCCCCATTCTTTTTGTAGATTTTAAAG
TGTTGTGCAGCAAAACTTTACCGTTGGAGATGTTGCGCCGACGCAGAGTA
GAGTAGAGTAGAGTAATACCCGGGTATCGGCGTGAAGGTGAAGCTTTCAG
TTCTCCGACGATGCAGGTCTTACGGTCGACGAGCAAGAGTTACGTCTATA
GCAAATTTATCACTTAGAGCATTCAAAACCGTGTTTTTTCGCCGAAATCA
TTCGTGTAAATCACGGGCTAGTCCCGATGGTTAATTCGCGGATTCGTTTG
TCGTCTAAACAACCTCAGTACCAGGCGAAAAACGATACAGGTTCTACATA
TTAGGGATTAAGGTAGTACGCAAGGGATACTACTGCACACCAGCATCCTC
GCGATGCGTGCTTTAGAACACGCCTTATTTTATGGCCATTGCGACCCCCC
GTGATCTTTTAGATCCTTTGACAAGTCAGAGGGTGTAATTTGTGTTTTTG
AAACTGTTTAGTCTCTTTTTCTTGGGAAAGGAAAGTCTAATGCCAAGAAC
TAGCTATGTGTGCTAGGACGTGCAGCATATCAAATGCATGAAATGGTGAA
ATATTTCAAGTTACCGGTCTCTACGCTACACTCGGTAAGGTCGTACAGGT
CATCGCTCGTTTTTGGGTGGATATGTACCCACTGACGATAAATTCGGCGG
GGCTCAGGTAGAGTGTTGTTTATGGTTCTGCGGCTACTTCGTTGTCCCGG
AGGCCATTGTTTTTGTTATGACTGTTCCCATTTTTTTCGCCCGCTATTGC
CAGTTTCTGTTTGGGAGATGGACTTACTCAGCTGGTATTATGCGACCAGG
GAAAAACATGCATGGACATCTCTAGCCTGGAAATCAACGGAGTACCTAAA
GAGCTTACGCCACTCTCGTGGAACATTGCCGGTGCTGACATTTTGTGTCT
CATGGCGTGCTCCCTAGGTGAGAAAGTAGTTTCTTCGATTCTGTCGGGTC
ACGTTTGCACATGCGCATTTCGTAAGTAGGGAACTGAAGAAAGGGTCATA
ATTCTTGCCTTATGCATCTGCTCCGAACGAATTTGTCGTGTTTCGTCGTT
GAAACGAGTAAGCACATAGCACATAGTGCATCCTGTGTCAAGCACAGCAG
AATTTGAGGAAGCTCGCTTTTTGTGTTTCGCGGAATTCGGGCGACACTTC
GAGGCACTGGATGATGATACGATATAAGCAGGGTGAGAAGTCGAGACTCT
ATTGCGTGTGATATAAGCAGGGTCACAATTAGAGAGTACACGTGATGAGT
TGAGTGACTTCAAAGTTTTGACTACCGTTCCGCCCCGTGCAGCGATTGTA
GCTCCCATCCTCATGCTTTCCACTGCTGTCATGCCTGCGTCATCTGCTTC
GCCGCTTTCATCCACATCGACAGGATACATGGCTTTATGCTTGGCGATTG
AATATGGCAAGACCTTCCCCAAACTGCGGGGAATACTCAGCCCGGACCCC
CGCGTGCCAATAGCACCTGTCCCTACCCAACACAGTAGCGGCAGCAACGG
TTATTCGCTCATGGAGTCGTCGACTGCTGTCGACTCAACGGATTTACTCG
TCGAGGATGAAGATGTTGCTGCTGAAGCCGTAAGGGTTGATAGTATGTTC
AGTTCTCCAAGGGTTGAAGCTGAAAATGGCGCAGAGGTGGTGTTGAAGGG
CCTTCGAAAGGTGTACCGGACTAAACAGGTGACAAATACGCATCGCGTGC
TGTAGAATGCTGGAGGCGAGAGTCGGAAATGAGCGTGGAGACAACAGTTC
CGGTACTTCAATGGTGTTGCATACATCACGTTCAGCACGTAACACTCCGT
CGGTGGCGGCGAAAGCAGTCGTAATTGATGTCGGTTTCACTCTAGAAGAA
ATTTAGTAACAATCGGTCGTTCAGCTTGGCAAAGTCTTATGTTTTCGTCA
TGAGAGAGGTCCTTTCACGTTCTATCTGGGATGGGGTCATCGGTTGTGCT
CAGTGATGCTTCTGCCAAAATGTTCTGACACTTGGCTTTGAGCAGGGACC
AAAGGTGGCGGTGCACAAGCTTAGCTTTGCGGTGGCAAAGGGGGACTGCT
TCGGCTTTTTGGGAATCAACGGTGCCGGTATGTTTCCGCTTGGATGACAC
CGTTTTTTCCCCCATTGATTGTCCGTTGCAGAGCGCGCGAGAGTTCCTAC
ACGTCGTAGCTGTTGCCGTACATTATAGAGGTATAACGTCCGAACAAAGC
GCCATATCAGTCGAACGTAATGCCACTTATCCGCAATAGCACAATGCTGC
TGTAGGTTGTTTGTAGGAAGCGTGCTTCGCGTGTCAGCAAGAGCTCAAGA
GTACCAACAATTTGTGCAAACGTTTGGCTTGTCAACAGGAAAGAGTACAA
CGCTGGGCATTTTATCTGGAGATATCTCCCCTACAACCGGCGAGGCAACC
ATCGCTGGCCATGACATTCTCACGGAGCAGGTAGGGACTGTCCTTCATCA
GTAGCGGTAATCTGACAGTGTCCATAGCGTTTTATGCACACCGTAACATG
GGTGTCAACGGCGTGTGAATGAGTTTGCCACAAAGCAGCTGTTGCAAAAT
GTTCGATCGGTGGGTCTTACGTGGTGGGTGCCTTCAATATCGACACTCAC
TTACGTTACTTACTGACGGCTGACCGACACTAATGCAGCAGTCGGCGATG
CACCCGCAGCATCACATCAGCTTATTGCCCTCTTGTCTTTCGGTCCCCTA
CATGTACATGCAGATTTAGCTGCCCCCTTAAGGCACAGGGGTGTCCTTTG
CCCTTATTATTGTGCAGCTGTAAGGTAGCGATAGCACGGTGAGACAATGT
ACACCGGAGTGAGATAGTCTCCCGCGATCTACTCACTTGAGGTTCAGAAA
TTGCTATTGCTTGGTAAGGGTAACGTTTGCACGCTTGGGAATTGCTCTTG
TAAAATTGTTGACAGCAGCATTTTCATGCGTGCGCTCTGTTGTGCCAACG
CAAAGCAGTGTAGTTCCCATCCAGATGGGCGAAGCGCTTCATGTAGTTGC
CATTTCCCGGCGATCGGCCCCTTGCAGCCGTGTAAATCGACAGCCTTATT
TTTAACGCCCTATAATTCGTTTCTTATTCCCCGATCATACGCCGATGATA
TACAGTCGAAGCTTCGGCGGTACATCGGCTACTGCCCGCAGGAAGACGCA
CTGCTCGATCTGCTCACGGTGAGCTTTAGTGTCCTGTCTCGCACCTACAC
TTGACCGACCTTTTTACCTACACTTGACCGACCTTTTTCCCGCCTAATTG
TTTTACGTATCCAGCTCGAACGTATTTCGGTGCACGATGCATGTTTCATT
CTCCTTAATATTGTCTATCTAGTCTATCTAACGTACCAGGTGATTTTGGT
GTTCGCAGCCGCGTGTGTAACACTGCAACCGCCGGATGTTTGTGGGAGTA
ACTCCAATTTTCTATTCATACAGTACAGGCCGATGATATCCTTTCACATT
AGCATTGGAGCGAACGGGAGGGAAGGTTTTGTAGGTATTTATGGAGTCAC
CCGTCCAAGCACCAACCCTCACTTGAACTTGAGCTATACAAGCTGGGCCG
ACCAAGAAACTTATATTGTTTCGGATGATCACATCTTCTCAACTACTGCG
CTTCACCAAAAAACGAAAGTTTTGTTGCAATCGACCAATCAACCCGCGTG
TGCAGAGCCACGTGCCTAGCCCGTTGAAATTAGTTCTACAAATTTGAGGT
TAGCTGCCCAACCAGCGTGTGAGGATGTTGGCGTTGAAACCGATTTATTT
TTGGGGCGCAATTAGAATCATGTGGCGTAAAAGTGCGCAGATCAGGGACA
CCCCAAGCCCACGCTCCGTGACATGGCTACGAGCGTGCCAGTAGGTCAGC
AATGGCAGAGGGCGTCAGTCCCTACGATTGTGCACAAGGCCAAGGGAATG
TATCGGTTGAAGCTGAGTTTGAATGTGTGCTGCATTGGCAGATCATCGGA
CACTGTGACAAATTGTAGGTTTACTGTACAATTGTATCTGAGCAAAGTTC
CTGAGCATAAATGCGCTGTTGAAGAATCGTCCTCCAAGGCGCAGTTTTTG
AAGTTTCGACCTGAAATTTGACACGTCATTCGCAACGTACTCGCGGAGAC
CCCAACCGCAATAAGCAGATTTATGTATGTGTTTTCAATCACTTACCACC
AATCCAAATTTCACCCCCTGTGGAAAATCCGTAACATATTTGCCAGAAAA
AAAGAAAAAAAAAGATTGCTTATCTCGGTTGGGGTCTCCGCGAGTACGTT
GCGAATCACGTGTCAAAATTTCAGGTTGAAACTTCAAAAAAAGCGTCGTG
GAGGGCGAGATGACTGCATAATTTCTTTCTTGGCGGGCCCAGGTTGTATT
TGATTCGCAATGTGCTGGAAGATGGCTAAAAAAAGCTCGCTTTTACACAT
GCATATTTTTTTCACGTGCCGATTTGGAGCAATGTTTATGTCGTTCGATT
GAGCAGATCGAATTAGATTTGGAATGAGGGTACACGGACCTCGTTGAATC
ACTTTTGTTATTACGTGTGGGCTTGGTTGTTCAATTCAAAAGACAATCAC
TCCTGATTTCGTCCACTTTGTGGTGTATGACCTTGGGCCAGTCGCGGCTT
TGACTGACTGTTACTCTCGTTCTACACGATTGCAGGTACAGGAGCACCTG
CTTCTTTACGCCCGCATCAAGGGCGTAGAGGAAGACCTACTGCCTAAGGT
GGCGGGCGAAAAGATGGAGCAAATGGACCTATGTCAATTCAAGAGGATCA
AGGTGTGACATTCCACTTTACTTTAGGTTACATTGCATATTTGCGTAGAT
TGGGCTTTCGCAAGGGAGTGATTCGTCGCAGCGGACATGGGTTGCAGTTT
TTAACCTGCACGATGCCGTTCACTAGACAGCCCTGAGGCGGACGGCACTT
TAAAATCGGCGTTCCTTGAGGTGCGTAATGGGAAGTCGGAATAGAGATCC
CCATGGGACCCTGCGCAAGCAACACTTGGTAGGATGGATTTACACTTCAA
GAGAAATTTGTTTCCCTTTCCCCGTGTACCCAGCGATATTCGTCGAGCCG
TGATATATTGATTGAATCAAATATCTAAATCATAGATCGACTCCTTCACT
TCACTAATGCAGTTGATTCTCTCAGGTACTTGTGGATTCATTTATGAATT
CTTTCACTCTTTCATTGATTCACTCTAATGATCTGTTCCCCTTTGCGGTG
TATTTTGTTCCACCTGGGGCTGTACGTGCATGTATCAATGATCTATCTGA
AGGCGTGTGAACTCAGCGGTGGGAACAAGCGCAAGTTGTCCGTTGCCATC
GCCATGATTGGAGAACCAAGGGTGGTGTTTTTGGACGAGCCGAGCACAGG
TGTGGACAGCATGTAGCCCTCAACTAGATTGCAACAACGGGGGACGTTCG
GAAGTGCGCCAGTCAATAGGCCTTATAGGCCGTCCTAGTGTCCTGGGCAT
AGTGGATTGGATGTACTGGGGATAGTTGCTCTCCTTTACACGATGGAAGT
GAATACATGGTAATACAAGAACAAGACGTATGCCATCTAAATGTAACATG
GTTCATGCCTGAATATGCGTTGAGCCTGCTCATACCGTAGCCTGTGCGAT
TGTTAAGGCCAGACTGTGCCAAGTCGACGAAACTGAACAATACTGGACGT
GTGACAGGTATGTATGTATTCGATAGCATCCCAACTTGGAATGAGTGCAT
GTTAGCACACTCGCGTTTTCATTTGTCCCAACAAGACGGACAATACTATT
CGTTGTCTCCAAAGCTCTTGTCCTTGTGCCTGTCCTCGTTCTCATGTGTT
ACTGAAAGGCATGGACCCGATAGCGCGTCGGTTCATGTGGGACATAATCA
GCCGCATGACTACGAAGGACAGGGAGTGCAGCGTTATCCTCACGACGCAC
AGTATGGAGGAGGCGGAGTCACTCTGCAACAATATTGGAATTATGGTGAG
ATTCGTTGGGAATATCTCAAAAACGTCCGAAGTGTGCGATATGCTCGTAG
CAAGATCCTTGTTGGCCTCAGGAAGGCTAGACGATGTCTTGCTTCATTGG
TGTAGAACTCTCAACTACAAAGCTGGGAGTGTGGTACAGGCCTGTAAAAT
GTCCGTGTTGGAAAGCACGACGGAATTACGCTGGTATTGTTTTCATTCCA
CTTTCGCCGTGCCCGAGGCGACGCCATCCGTTTTTGCAAACCTCGAACCT
GTACGGCCACGCTTTCGAAAGCACGACGGAATTATGCTGGTATTGTTTTC
ATTCCGCTTTCGCCGTGCCCGAGGCGACGCCATCCGTTTTTGCAAACCTC
GAATCTGCACGGCCATGCTCATTTTCATTGCCAATTATTTAATAAGTATC
CAAGTGCGTTGGAAATTTGCGCATCACACTCACCGGCTTCTGTTCGTATA
TGGATCTTCTAGCGCTAGTTGTCAGCTGTAAGTGAAGCGCTGTTACTACC
AACGGACGAATGGACTAAATCAGGTGAACGGAAGGCTTCGTTGTTTGGGC
TCAACGCAGCACCTCAAGCATCGGTTCGGCAGGGGGTTCGAGGCGGACAT
GAAGCTACACCGGCCTTCGGATGCAGCCGCCATGGAGGTGTTACGTGTGA
TGCAAGAGAAGCGGCTTGGGCCTATCATAGGCCAAGGTTTAGATCGGTGG
GGAGCACCTTCGAGCCGAATGTTCATGTCAACACCTGTACATTTTCGGTG
TCAAGTATTTGCTTTGGGAGTAAGTGTGGTTAATATTATGAGGACGAGTT
AATGGTTAATGGCAATTCCGTTCAACCGTACGGAAAATGATGCATATCGT
GCAGGTATCAAAGGGTTCATCGGTGGATCATTATTTTCATTTGGACGTGC
CTTATTGTTCTGCAGAATCCGTGCCTCGGGCAACTAGACAAAATGGTTCC
AACACGATGTTGGATGTTCTTGGCATACAACGGGACATGGTACTTTCCGT
TCTGATGAGCGACAGAAGCGTTGCACCGAGACTGGTTTCACATGAGGCTA
CACTAGGGTTTTGATTCGCGCCTGTTCAGTACGGGATACGAAGTAAATCT
TTCATGAAGCTGTTGTACTTACTCATTTGGCAGTGGTCGACAACTCAACC
GCAGCTGCTAGAACTCACGGTACGAGTCGACCTTGTATAGCGCGTGTAAA
TGGCGGTTTGTCTCGCGTTCGCTGAGTGCTGGAATCTTGCTTGTTAGACT
GTGATCTGGTTCACTTTTTCGTTGTTATTGCAGGTCCAGACTCGTGCCTC
CTCTAGACATCTACTGCCGAGCTATGGTGCAAGATGGAGGAACCTCGGCA
AGGTAAGCAGTCGTGGAGAGAGCTTCGATGATTCGAGCGCACATCTGCCA
ATGTGTTTTGCTGCTGCCGGCATGCTTTGACGAACTCTTCATGTACTCAT
GCAGCAAATGAACATTTTTTTGCCGTTTTACGGCGAAGAGGATACCAGAC
GTATAAGCAGGAAGCCACGTCGAGGATGCAAATACGCATGCGGCGTGTTT
CTGCCTCCTGCCAGAGAGAGGCGCCCTGTTGCCTTAACACGAATAGCTTG
TGCTGCAATTCTCTTCGTGGAAGTACCACAGGCCACAAGTATACACGCTA
AAACAGCCGTCAGCGAAACAGAGGCAGGAGCAATCCCCGTAATAGGTTTC
AGGAAGCTTTACTCTTAACAGACATGAGCGACGACAGCACGCAGTAGCGT
TTGCCAGCCAAGAATCCTTCTGTGAGTTTGTCTTGTTCTTGCTTTAACTT
CAAACTCAGCAGATACATCAACATCACGTAGCCGCTGATGTACACACACA
TGTTTGGCGTGTTCTCGCTCGTACTTCCTTGTTCTTTCTTGTTCGTTCTG
TTTGCTACGGACTGTCCACCTACTGACCGCGCACACCCATTGGTGGGAAG
CATTGCCCACGGTATAGTAACAATTTATGTTAGAGGCACCGTTGCTCGCA
TTACTGTTCTTCTCATCATTATTCTGTAACAAAAACCAAACTCCTGATTG
CTTCACCTCCGCCTGTCCGCTGCAAGCATCATAAACATGATCACCCCTGA
CTTTGATTCACGACTCGAAGAGCTTGGAAATATATTGTCGTCTGCGATCT
ATCTCACACAACCGCTCCTTGAATATTGTATTTGCCGTGTATTTAGTCCT
CATACAGTGAGCAATGAACATCGAACATTGAATGTTGAACATCGAGCATC
GGTACCAGGGAGGCTGTGAAGCAGTGATGTGCTGGGTATGGACTTGGCAA
TTTGTTCCTGCCACTCTGTCGAGGGGAGAAGAAGACCCGAATGGGTTGAT
CTTTGTGGTTGTCGAATACATTCAAATTATCCTGATTTATCACCTCCGCT
GCGTATTTTAACTGCCAGGGCGGACGCTATGGAGGAAGCCCTTCACTCCG
GCAGCGGGGCATTTTTGCAAGATATTATCCGGTCTGAGGGTGGCACTGTG
CCGGCCAGGTGATTCACCGCTACTTCGCCATCGTCGGTCTTGCAGTGCAT
CGCTGCACCTTCTCTTCGCTGTCGAAGGAGCACCCATGTTATGACTTGAA
GAGGCGGTTTCTCTTTCTTACCGGCATGGTTGTTTATTTCAGTCGTTAGC
GTTCAAAGCTTTTCACACAAGCTTTATTGCACATGCACGTGTCTTCGACT
GACGCATATCTTCAACTTGTCACCAAAAGCGGTTAGTAGTGAATAGTATT
ATCGAATGGTTGGTTGGCCCTTGCAGAGTTTTCATTCCGGAACCGAATGG
GGTGTCGTTTATTTCGCACCTCCAGCCTGTGTGGGGTCCGTTGTGCAAGA
GGTTTCATCCCTATAATGACGCTCATGGTCGGTTTTGCCTGACTACATGT
ACAAGCTGGTCGATGGTCACTTTCTTTATACGTTGCCGGTGATGTGGAAA
GCCTTGGACTTACTAGCTTTGTGTGTAGACCTACCGTAACAACCACTGCC
CCTAGTTCCAGAAGTTGATGTTCCGATCAGGCGGCATTAAGGCTCGTGAT
TTGGACTAGAGTTCATACCTAGTTCTCGCTCGCTCTTGCCGATTTCCGAG
GGGCTGGCTGGCTTGTTTTTGGTGTGTTCGTTGTGGGCGGACCATGGCCG
TTTCCAATTCAATCGTTTTGCGCAGGCGTACGTCATACTGTTGATTTTGG
TGTCCGCTGCTGCACGCTCGTGTTTCAAGGTTATTCATCGACTGGTACCT
CTGTGAGGACAGAGCTGCTGACCTCGAGATGTTTCTCAACAAGACGTTTC
CGGGGACAGGTACGATAAGCACCGTGCGGTAAGCATCGCATTTGTTTCCC
AGCGAAGCTGCATCATGCGGGCCGCGTGTATTCACCTTCATGTAGTCACA
GGGAGCATATTTTTTCACCTGCAGATGACTCCCTACCAGGAACCAATCCC
GCGCAGGGGAGTTTTTTTGTAATACCGCTTACCTTGGTATTTTTCGATGC
TTGGGGGGGCAAGTTCCCGCAACTCGATACACAGCACTTGACATGTTCGC
ACCCACCAGAGGGTGGTATACTGGTGGGAATATCATATAACGGGCTTTGT
CGAAAATGCTGATCTGTTAACCCAGCATTTCCAATGCCCCAATTTTTACC
CTCACGAACAGAGCTGGTGGAGCGACCGACACTGTTTTCATGTCGATACA
AGATTGCTCACCAAGAGGGGATGACGCTGGCGGATGTTTTCGGACACTTC
GAGGCGGCCAAGACCGAGGTTCGTCGATTGATTACCGTCGCGAAATCTAC
AGTTGGGACTAAATGTCAATGTTCTTCGGCGTTATTGTTTGTTTGCACAG
GTTTGTCACCACACAGCAAACTTGACCCTCGGTGCAAAACAAGTTAGGAT
GTATAGATAGCTACATGCTTGTGAAGTAATAACTGCAAAAAAAAACGGAA
ATGGGCGAAACAGCGTCCGTCGAAAATGGGATATACACTAATGCCTCACA
TGTTCGCATTTATATCGCCGAAAACGTGCCCGATTCACAAGCTCATATGT
TAATTGGAAAGTTCCCGATCCCAATTCCAATTCTGGCGCATTCTATGGAA
CTAGCGCATTTCGCGTCATGGCCTTGAGATTTACTGTTCACTACTAAAAA
ATCCACCATAAACATCAGCAGCCCCCCCTTTTTTTTTGTTGAAAAAGTGA
ATTCCTCAACCAAGTCTAGAAATCAAATTTCATTCAATGCAATCCGGTGC
AAAGGAAAGCCGACAACCGTGGGTGCACAGATATATGTTGATACTGTCTT
CGAAAGCGAGAAGTCACCATTTATGTTGTTCAGAGGTATCCCTCGCATGA
TTCACCTTCGATTTTCGTCAACTCTTGCGCCCCCCCCCATAAATACGAAT
ACCTGCAAATGGTTTAACAAAAAACTGAAACTATTGGCCCGAGTTTGAGG
GTGAGCTCATGTTTTCTATGTGCCCTGGACCATCTACGACTGCTAATAAT
ACTTGTAAATCGAATGAACGGGGGTGGGTACTTATTCTATGTACCGCTCA
TTCTGAAACTCGGGCGAATACTTTCAGTTTTTTGTGAGAACCATTTGCAA
GCATTCGTATTTGTCCGGAGGGTGAACTCTTGCTTGGTGGTGTTGCCGCC
CACCCATCACGCACTTTATTTCGCTGGAATGGACTACCTGGGTTACTTGG
ATCAAGCCTTCATTTTTTCCACCTGTCTGTCGTATTTATGTGTGTGTGTG
TGTGTGTTTGCTAGCTTGGTCTCGCCTCTTATGCAGTCGGGCAGACGACG
CTGGAGCAGATTTTCAACAACTTCGCCGCTAGTCGAGAAAACCCCGAGGT
TAGGTTGGGAGCCGGCGGCAACTAGTAGCGTAGGTTGGATTCTGGGTTGT
GTTTTATTTCGGCTAGCCAGGCACATGTTCGGAAGGTGTTGATGGGAAAT
TTGATGCGCACAGTATTTGGTGCTGGAAGACTTGATTCAAGAGTTGCGGT
CGGTTTATTAGAAGGTTCTCTGCGTATTCAGAAGATGATCTACCCGTAGG
CCGGTTAGACAGGCAGCTGTTCTTAAAGTTTCCTATAGCCTGCCTTACGA
CTTGATCATGTGTTCCAGTTGAAGTATGTACTGCGTTTCTGGTCATCTTG
GGAATCATGTTTGGCCAATGCTTTGTGCTTGGCGTCTTTCCATTAGAGGC
CACGATGTTTACCCTACTGTACGATGGTTGAATCTCACCGTTGGTGACAG
TGAAAGCAAACGTTGAGTTCGGCGTCGATAATCACCCATGGTCGATGCTA
TCAAGGCCCAGCAATGGGAGGGACCACGCGTAAACAGGGAGACGTGCACT
GAAGTTGGACAAGCGTCATAGTCGCATCCGATGGTCGATGTAATCGTTTC
CTTGTCACCAGAAGTCGGCAAAGCTAGGTAAAGGCGAATCATTTGACCGC
GAGACTACGCAAAGGCAGTGCCGGGCGGTCGCGCAGTGACAGGGCAGAAA
ATTAGGTGGTGTGATGGCAGATGTAGACTCGTCATCAACATCAAACCGGG
AGCGACTGCCGAACGGACTGGTTGTACACATATGTACGTCCCCTGCTGCG
TGACAGAAATAGGAGGAGCTTCCCACTGTGTGGTACTTACTCAGCACTGG
TGTGTGACATGCTTGCTGTGTGTTCTTGGGGGCTCCAAGTACCGCACCCT
TAGCTGTGCGTATCATCATGTAACGACCACTTACAGGAATATAGGATCCC
TTTGTTCTTTAGGGTAAAAATAATACAGTTGTAATTTGCGCACTATATCC
CATCCCCCAAACCCAATGAGCTTTAAATATTTTCTCTTCTACAGATAAAA
AACGTCTACTTTCGACAAAATTGGGATCAGGAAATCTCAAGATATAGGAC
AAAACGGCAAAATCAAAGGGAACCGTGAACGGCTACTAGATAGCTGCTTT
GAATGCCCTTATCTCGGGAGTAGAGGAGTCAACATGAAAGACACCAACAC
CCAACGAACGCTGATGCCATGTACTTTCACCGACTCTGTTTGAGTCATTC
TTGATGCGGCACGTACTCTCGGGAAAATCGTGAAAACACGTTTTGTCCTA
AAGAAAGAGTGACCCTTGCTTATAGAGTTGGCTGTTATTTGGACATTGCA
GCTGTACAAACACCGCTGCCATGAATAGGGCGCGGCATAGCCTTGTCTGT
CTTCAGGATGAAGATCGGCGGCTCCGGACCGAGAGGACTCCAGGTTCCAT
CATGGAGTATATATTTGATGACGGTTTCAACAGCGCCTACTATAATACAA
GTTCTTTAAAAGTTTTTTTTCTTGAAGATGAAACGTGTTGCACGATAGAT
AATCCGAATAGTACGTGACGAATCAAGCATGAAATAGCCGATCATGAAAA
GATGGAACGTAGTCTCATTAATTTTTCATTGAAAACTCGAAAAACGGTGC
ATCCTGATGGTACACGCAGGGATGGTTATTGTGAGTAAAGGCTTTTCGTG
GAGGCCTAGGGCAGGTCGCGCTGTGTGTGTTCCTTCGCGGCCGCTCGGCC
GCTACTTCCGGCCCAACGACGAGGATTCCACTTTCCTTTCTTTTAAACGG
TAAATAAAAGCATTGGTGTGGACACGGTCTCTTGTAACGGCGGAACGACG
ATTGAATTTCGCGGATTGAATCATGTTATTGGACACGCCGAAGGCCTTCA
TGAAGAACTGGTTGCAGACGACCCTCCTACCAGAGATGGCCTTTTACTAG
CGGCGCGATTAAGTTGAGAGGATTTCGAGCACACAAGTTCTCGTCCAGCA
CACCCTCATCCTGTGAAAGCGGACCACCATGAATGCACCATCCACCGCAA
TATCTACTAAAACAAACCGTTGCGTGGAATGGGTGTGGAAGGAAATGAGG
GCTCAAGGGTAGTCTCATGAATAAAGTATGATCCAATCCTGCTTGGACAA
AAGCTTCAGTGGTGTCAAAATGAAACAGTCGTAAATCCTCCTGTACTGCT
ACGGCCAACACCGTCATCACAGCAGCGGCGGAAAAGGTAGGTGCAAAACA
TTCAGCGTAGTCCATGTCTTGGATTTGTGTCCTTCCATCAGCTGTCAACC
TTGCTTTGCACTTTACCACATCCCCCACCTCGTTAATTTATATGACAAAA
TGAACTGCCCCCTCGACGGTTTCTTCCTTTCGCTGTCACTTACTACAGTA
AAAGTTCCCGTCCTAGCATGGCTCCCAATTTCTCTTTGATTTTCCTCCTT
CCAAAACGGACGGTATTTTGATCGTCGCACATTATCTCTGTTTCGAGGTA
AGCGTTCCGCATCATTCAAGAAGAAAGGCTCAAAACTCAACTCCCCTGTA
CCAGAAAAGCAGCCTCGTCCTCCATAACGTCGGACATCTTGAACTTTACC
TCGGGTCCAGCGTCATAAACGAGGAAAGCTCACGCCTCCTCGTCCTGTAT
CCTCCGCTGTTCTGCTCTTGTCCTTCCCTGCCGGATGGGGTCGGGCGTCG
GTACGTTACACGCTTCAAGGCGGCGCGCCTCTGTATCCGCAAGGGCGAGA
GGGGAGCCCTCCCCAGAAATCGCTCCGTTGTCGAGACTGTCTCGCGCACT
TCTAGGCGACGAAGTTCCAGAAACAGACGACGAACCTCCAGAAGCAGGCG
ACGAAGCTGTTAAGGAAGACGATCTTGAAGATGAGGAAGGCGTTGCGGTT
GTTAGTGGCGAAGAAGCCTCGGCTGGGGGAGATGACGTCGCTACCCCCCT
CTTGTCTTCCTGCAAAGTTGTCGGCCTAGGCAAATATACGTATTCCATTT
CCCCCCCCTCCTCACTTTCTGTCGGCGTCGGACATTTCGGCTGTACAGAG
GAAGGAGTGGACCGCGCAGTTACATGAGCCCATGTGACATCGCGAGTTGT
TACAACGGCGCCAGATTCAGACAGTACGCGCATAGAGTCCTTCGGATGGT
TGCGTTGCGGTCCACGGTAGACACACGGTCTTGCTTTCGGTTCTAATTTA
TTGTTTCTCTTTACTTGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig4462:1462..15779-

>mRNA_H-paniculata_contig4462.11253.1 ID=mRNA_H-paniculata_contig4462.11253.1|Name=mRNA_H-paniculata_contig4462.11253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3396bp|location=Sequence derived from alignment at H-paniculata_contig4462:1462..15779- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTGTACAGGCTGTTTCCAGGATGGGTGTACAGGCTGTTTCCAGGGG
AAAAACATGCATGGACATCTCTAGCCTGGAAATCAACGGAGTACCTAAAG
AGCTTACGCCACTCTCGTGGAACATTGCCGGTGCTGACATTTTGTGTCTC
ATGGCGTGCTCCCTAGGGAAAAACATGCATGGACATCTCTAGCCTGGAAA
TCAACGGAGTACCTAAAGAGCTTACGCCACTCTCGTGGAACATTGCCGGT
GCTGACATTTTGTGTCTCATGGCGTGCTCCCTAGGATACATGGCTTTATG
CTTGGCGATTGAATATGGCAAGACCTTCCCCAAACTGCGGGGAATACTCA
GCCCGGACCCCCGCGTGCCAATAGCACCTGTCCCTACCCAACACAGTAGC
GGCAGCAACGGTTATTCGCTCATGGAGTCGTCGACTGCTGTCGACTCAAC
GGATTTACTCGTCGAGGATGAAGATGTTGCTGCTGAAGCCGTAAGGGTTG
ATAGTATGTTCAGTTCTCCAAGGGTTGAAGCTGAAAATGGCGCAGAGGTG
GTGTTGAAGGGCCTTCGAAAGGTGTACCGGACTAAACAGGATACATGGCT
TTATGCTTGGCGATTGAATATGGCAAGACCTTCCCCAAACTGCGGGGAAT
ACTCAGCCCGGACCCCCGCGTGCCAATAGCACCTGTCCCTACCCAACACA
GTAGCGGCAGCAACGGTTATTCGCTCATGGAGTCGTCGACTGCTGTCGAC
TCAACGGATTTACTCGTCGAGGATGAAGATGTTGCTGCTGAAGCCGTAAG
GGTTGATAGTATGTTCAGTTCTCCAAGGGTTGAAGCTGAAAATGGCGCAG
AGGTGGTGTTGAAGGGCCTTCGAAAGGTGTACCGGACTAAACAGGGACCA
AAGGTGGCGGTGCACAAGCTTAGCTTTGCGGTGGCAAAGGGGGACTGCTT
CGGCTTTTTGGGAATCAACGGTGCCGGGACCAAAGGTGGCGGTGCACAAG
CTTAGCTTTGCGGTGGCAAAGGGGGACTGCTTCGGCTTTTTGGGAATCAA
CGGTGCCGGAAAGAGTACAACGCTGGGCATTTTATCTGGAGATATCTCCC
CTACAACCGGCGAGGCAACCATCGCTGGCCATGACATTCTCACGGAGCAG
GAAAGAGTACAACGCTGGGCATTTTATCTGGAGATATCTCCCCTACAACC
GGCGAGGCAACCATCGCTGGCCATGACATTCTCACGGAGCAGTCGAAGCT
TCGGCGGTACATCGGCTACTGCCCGCAGGAAGACGCACTGCTCGATCTGC
TCACGTCGAAGCTTCGGCGGTACATCGGCTACTGCCCGCAGGAAGACGCA
CTGCTCGATCTGCTCACGGTACAGGAGCACCTGCTTCTTTACGCCCGCAT
CAAGGGCGTAGAGGAAGACCTACTGCCTAAGGTGGCGGGCGAAAAGATGG
AGCAAATGGACCTATGTCAATTCAAGAGGATCAAGGTACAGGAGCACCTG
CTTCTTTACGCCCGCATCAAGGGCGTAGAGGAAGACCTACTGCCTAAGGT
GGCGGGCGAAAAGATGGAGCAAATGGACCTATGTCAATTCAAGAGGATCA
AGGCGTGTGAACTCAGCGGTGGGAACAAGCGCAAGTTGTCCGTTGCCATC
GCCATGATTGGAGAACCAAGGGTGGTGTTTTTGGACGAGCCGAGCACAGG
CGTGTGAACTCAGCGGTGGGAACAAGCGCAAGTTGTCCGTTGCCATCGCC
ATGATTGGAGAACCAAGGGTGGTGTTTTTGGACGAGCCGAGCACAGGCAT
GGACCCGATAGCGCGTCGGTTCATGTGGGACATAATCAGCCGCATGACTA
CGAAGGACAGGGAGTGCAGCGTTATCCTCACGACGCACAGTATGGAGGAG
GCGGAGTCACTCTGCAACAATATTGGAATTATGGCATGGACCCGATAGCG
CGTCGGTTCATGTGGGACATAATCAGCCGCATGACTACGAAGGACAGGGA
GTGCAGCGTTATCCTCACGACGCACAGTATGGAGGAGGCGGAGTCACTCT
GCAACAATATTGGAATTATGGTGAACGGAAGGCTTCGTTGTTTGGGCTCA
ACGCAGCACCTCAAGCATCGGTTCGGCAGGGGGTTCGAGGCGGACATGAA
GCTACACCGGCCTTCGGATGCAGCCGCCATGGAGGTGTTACGTGTGATGC
AAGAGAAGCGGCTTGGGCCTATCATAGGCCAAGGTTTAGATCGGTGAACG
GAAGGCTTCGTTGTTTGGGCTCAACGCAGCACCTCAAGCATCGGTTCGGC
AGGGGGTTCGAGGCGGACATGAAGCTACACCGGCCTTCGGATGCAGCCGC
CATGGAGGTGTTACGTGTGATGCAAGAGAAGCGGCTTGGGCCTATCATAG
GCCAAGGTTTAGATCGGTCCAGACTCGTGCCTCCTCTAGACATCTACTGC
CGAGCTATGGTGCAAGATGGAGGAACCTCGGCAAGGTCCAGACTCGTGCC
TCCTCTAGACATCTACTGCCGAGCTATGGTGCAAGATGGAGGAACCTCGG
CAAGGGCGGACGCTATGGAGGAAGCCCTTCACTCCGGCAGCGGGGCATTT
TTGCAAGATATTATCCGGTCTGAGGGTGGCACTGTGCCGGCCAGGGCGGA
CGCTATGGAGGAAGCCCTTCACTCCGGCAGCGGGGCATTTTTGCAAGATA
TTATCCGGTCTGAGGGTGGCACTGTGCCGGCCAGGTTATTCATCGACTGG
TACCTCTGTGAGGACAGAGCTGCTGACCTCGAGATGTTTCTCAACAAGAC
GTTTCCGGGGACAGGTTATTCATCGACTGGTACCTCTGTGAGGACAGAGC
TGCTGACCTCGAGATGTTTCTCAACAAGACGTTTCCGGGGACAGAGCTGG
TGGAGCGACCGACACTGTTTTCATGTCGATACAAGATTGCTCACCAAGAG
GGGATGACGCTGGCGGATGTTTTCGGACACTTCGAGGCGGCCAAGACCGA
GAGCTGGTGGAGCGACCGACACTGTTTTCATGTCGATACAAGATTGCTCA
CCAAGAGGGGATGACGCTGGCGGATGTTTTCGGACACTTCGAGGCGGCCA
AGACCGAGGCGGCGCGCCTCTGTATCCGCAAGGGCGAGAGGGGAGCCCTC
CCCAGAAATCGCTCCGTTGTCGAGACTGTCTCGCGCACTTCTAGGCGACG
AAGTTCCAGAAACAGACGACGAACCTCCAGAAGCAGGCGACGAAGCTGTT
AAGCGGCGCGCCTCTGTATCCGCAAGGGCGAGAGGGGAGCCCTCCCCAGA
AATCGCTCCGTTGTCGAGACTGTCTCGCGCACTTCTAGGCGACGAAGTTC
CAGAAACAGACGACGAACCTCCAGAAGCAGGCGACGAAGCTGTTAA
back to top