mRNA_H-paniculata_contig44439.11224.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig44439.11224.1 vs. uniprot
Match: D7G511_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G511_ECTSI) HSP 1 Score: 142 bits (359), Expect = 1.520e-37 Identity = 67/104 (64.42%), Postives = 84/104 (80.77%), Query Frame = 1
Query: 4 QGALILENWLMVAPVDVAALKFAQDAHIFLGDSANTRDCVARVLPFFSNTTFGYGSVLGMHAFGLAENGSYAQGEEAAHLAICQNPKDVWAMNAMSYVYEMEVK 315
+GAL LE WLM APVD+ ALK +QDAH+ LGDSAN RDCV RVLPF+S+ TFGYG+VLGMHAFGL ENG+YA EE A +A+ D+WA++AM++V+EME +
Sbjct: 168 EGALHLETWLMSAPVDLPALKLSQDAHLTLGDSANMRDCVGRVLPFWSDATFGYGNVLGMHAFGLVENGAYALAEERADMALAIQRTDIWAVHAMAHVFEMEAR 271
BLAST of mRNA_H-paniculata_contig44439.11224.1 vs. uniprot
Match: UPI0012441A5E (tetratricopeptide repeat protein n=1 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=UPI0012441A5E) HSP 1 Score: 90.5 bits (223), Expect = 4.260e-19 Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 22 ENWLMVAPVDVAALKFAQDAHIFLGDSANTRDCVARVLPFFSNTTFGYGSVLGMHAFGLAENGSYAQGEEAAHLAICQNPKDVWAMNAMSYVYEMEVKL 318
E L+ P D+ A K QD + FLGDSAN RD V RVLP +S + GYG +LGM AFGL E+G Y Q E AI +N D WA +A+++V EM+ ++
Sbjct: 51 EAVLLEHPRDLFATKVLQDLYFFLGDSANLRDTVGRVLPSWSESDAGYGFLLGMLAFGLEESGDYQQAERLGRAAIARNAYDPWAHHAVAHVLEMQGRI 149
BLAST of mRNA_H-paniculata_contig44439.11224.1 vs. uniprot
Match: A0A418WDR5_9PROT (Tetratricopeptide repeat protein n=1 Tax=Oleomonas cavernae TaxID=2320859 RepID=A0A418WDR5_9PROT) HSP 1 Score: 89.0 bits (219), Expect = 2.020e-18 Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 22 ENW---LMVAPVDVAALKFAQDAHIFLGDSANTRDCVARVLPFFSNTTFGYGSVLGMHAFGLAENGSYAQGEEAAHLAICQNPKDVWAMNAMSYVYEME 309
E+W M P D+ A++ AQ FLG S RD VARVLP + + GYGS+LGMHAFGL E G YAQ E A + ++P+D W ++A+++V EM+
Sbjct: 113 EHWGRTAMAYPRDLTAVQLAQVTDFFLGYSTMLRDRVARVLPHWDTSVPGYGSILGMHAFGLEEAGDYAQAEAAGRECVERDPRDAWGVHAVAHVMEMQ 211
BLAST of mRNA_H-paniculata_contig44439.11224.1 vs. uniprot
Match: A0A5J6MR69_9PROT (Tetratricopeptide repeat protein 38 family protein n=1 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MR69_9PROT) HSP 1 Score: 85.1 bits (209), Expect = 5.030e-17 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 22 ENWLMVAPVDVAALKFAQDAHIFLGDSANTRDCVARVLPFFSNTTFGYGSVLGMHAFGLAENGSYAQGEEAAHLAICQNPKDVWAMNAMSYVYEME 309
E L+ P D+ A+K QD + FLGD+AN RD VARVLP +S GY +LGM +FGL ENG Y Q E AI ++ D WA +A+++V EM+
Sbjct: 115 EAVLLDHPHDLLAVKVLQDLYFFLGDAANIRDTVARVLPNWSEAEPGYSYLLGMLSFGLEENGDYQQAERMGRGAIARDAYDPWAHHAIAHVLEMQ 210
BLAST of mRNA_H-paniculata_contig44439.11224.1 vs. uniprot
Match: A0A140HLD5_9BURK (Uncharacterized protein n=2 Tax=Ramlibacter tataouinensis TaxID=94132 RepID=A0A140HLD5_9BURK) HSP 1 Score: 84.0 bits (206), Expect = 1.200e-16 Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 16 ILENWLMVAPVDVAALKFAQDAHIFLGDSANTRDCVARVLPFFSNTTFGYGSVLGMHAFGLAENGSYAQGEEAAHLAICQNPKDVWAMNAMSYVYEME 309
IL W P DVAAL FA + GD+ N + RVLP +S YG VLGMHAFGL E+G YA+ E+ A+ NP+D WA++A+++V+EME
Sbjct: 106 ILVEW----PRDVAALLFAHLFDFYRGDALNLKRRPQRVLPHWSRAMPLYGYVLGMHAFGLEESGHYAEAEDTGRAALGVNPRDPWAVHAVTHVFEME 199
BLAST of mRNA_H-paniculata_contig44439.11224.1 vs. uniprot
Match: A0A8J7N206_9PROT (Tetratricopeptide repeat protein n=1 Tax=Candidatus Odyssella sp. TaxID=2589116 RepID=A0A8J7N206_9PROT) HSP 1 Score: 84.0 bits (206), Expect = 1.300e-16 Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 22 ENWLMVAPVDVAALKFAQDAHIFLGDSANTRDCVARVLPFFSNTTFGYGSVLGMHAFGLAENGSYAQGEEAAHLAICQNPKDVWAMNAMSYVYEME 309
E L+ P D+ ALK H +LGD+A RD VARVLP +S +T YG VL M AFGL E G YA+ E+A ++ N +D W ++A+++V EM+
Sbjct: 115 EAILIEHPRDILALKLGHFTHFYLGDAAELRDSVARVLPCWSESTPDYGYVLAMRAFGLEEAGDYAEAEKAGRRSVEINREDSWGVHAVAHVLEMQ 210
BLAST of mRNA_H-paniculata_contig44439.11224.1 vs. uniprot
Match: A0A6N8J331_9BURK (Tetratricopeptide repeat protein n=1 Tax=Ramlibacter pinisoli TaxID=2682844 RepID=A0A6N8J331_9BURK) HSP 1 Score: 83.2 bits (204), Expect = 2.420e-16 Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 16 ILENWLMVAPVDVAALKFAQDAHIFLGDSANTRDCVARVLPFFSNTTFGYGSVLGMHAFGLAENGSYAQGEEAAHLAICQNPKDVWAMNAMSYVYEME 309
IL W P DVAAL FA + GD+ N R RVLP +S G VLGMHAFGL E+G YA+ E+A A+ +NP+D WA++A+++V+EM+
Sbjct: 131 ILVRW----PRDVAALLFAHLFDFYRGDALNLRRRPQRVLPHWSPELPLSGYVLGMHAFGLEESGQYAEAEDAGRAALVRNPRDPWAVHAVTHVFEMQ 224
BLAST of mRNA_H-paniculata_contig44439.11224.1 vs. uniprot
Match: A0A2T7PG27_POMCA (Tetratricopeptide repeat protein 38 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PG27_POMCA) HSP 1 Score: 81.6 bits (200), Expect = 6.070e-16 Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = 1
Query: 16 ILENWLMVAPVDVAALKFAQDAHIFLGDSANTRDCVARVLPFFSNTTFGYGSVLGMHAFGLAENGSYAQGEEAAHLAICQNPKDVWAMNAMSYVYEM 306
+ E+ L+ P D+ ALK A +I+LGDSA RD VAR+LP + ++ YG +LGMHAFGL E Y + E+ A A+ N D W+ + +S+V EM
Sbjct: 132 VWEDILLEHPGDILALKCAYLGYIYLGDSAQLRDSVARILPHWKTSSPYYGFLLGMHAFGLEETNMYERAEKQARKALELNRHDCWSTHTLSHVLEM 228
BLAST of mRNA_H-paniculata_contig44439.11224.1 vs. uniprot
Match: UPI000D72FD32 (tetratricopeptide repeat protein 38-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72FD32) HSP 1 Score: 81.6 bits (200), Expect = 8.670e-16 Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = 1
Query: 16 ILENWLMVAPVDVAALKFAQDAHIFLGDSANTRDCVARVLPFFSNTTFGYGSVLGMHAFGLAENGSYAQGEEAAHLAICQNPKDVWAMNAMSYVYEM 306
+ E+ L+ P D+ ALK A +I+LGDSA RD VAR+LP + ++ YG +LGMHAFGL E Y + E+ A A+ N D W+ + +S+V EM
Sbjct: 132 VWEDILLEHPGDILALKCAYLGYIYLGDSAQLRDSVARILPHWKTSSPYYGFLLGMHAFGLEETNMYERAEKQARKALELNRHDCWSTHTLSHVLEM 228
BLAST of mRNA_H-paniculata_contig44439.11224.1 vs. uniprot
Match: A0A4Z0C554_9BURK (Tetratricopeptide repeat protein n=1 Tax=Ramlibacter henchirensis TaxID=204072 RepID=A0A4Z0C554_9BURK) HSP 1 Score: 80.5 bits (197), Expect = 2.190e-15 Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 16 ILENWLMVAPVDVAALKFAQDAHIFLGDSANTRDCVARVLPFFSNTTFGYGSVLGMHAFGLAENGSYAQGEEAAHLAICQNPKDVWAMNAMSYVYEME 309
IL W P DVAAL FA + GD+ N + RVLP +S + YG VLGM AFGL E+G Y + E+A A+ NP+D WA++A+++V+EM+
Sbjct: 130 ILVQW----PRDVAALLFAHLFDFYRGDALNLKRRPQRVLPRWSPDSPFYGYVLGMAAFGLEESGHYCEAEDAGRAAVAMNPRDPWAIHAVTHVFEMQ 223 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44439.11224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig44439.11224.1 >prot_H-paniculata_contig44439.11224.1 ID=prot_H-paniculata_contig44439.11224.1|Name=mRNA_H-paniculata_contig44439.11224.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp VQGALILENWLMVAPVDVAALKFAQDAHIFLGDSANTRDCVARVLPFFSNback to top mRNA from alignment at H-paniculata_contig44439:528..1584- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig44439.11224.1 ID=mRNA_H-paniculata_contig44439.11224.1|Name=mRNA_H-paniculata_contig44439.11224.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1057bp|location=Sequence derived from alignment at H-paniculata_contig44439:528..1584- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig44439:528..1584- >mRNA_H-paniculata_contig44439.11224.1 ID=mRNA_H-paniculata_contig44439.11224.1|Name=mRNA_H-paniculata_contig44439.11224.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at H-paniculata_contig44439:528..1584- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |