mRNA_H-paniculata_contig4391.11134.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4391.11134.1 vs. uniprot
Match: D7FS76_ECTSI (Magnesium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS76_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 2.120e-21 Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 1
Query: 1 QDINSASNVLDLLQARVRSTEALVMVKLDIARNRILTAGLIFSMGSTCFTLGTLISGLFGTNV 189
QDINS NVL+LL R RSTEALVMVKLDIARNRILTAGL+FSM STC T+G L+SG+FG N+
Sbjct: 197 QDINSIYNVLELLLNRARSTEALVMVKLDIARNRILTAGLVFSMASTCLTVGALVSGIFGMNL 259
BLAST of mRNA_H-paniculata_contig4391.11134.1 vs. uniprot
Match: A0A6H5JWS6_9PHAE (Magnesium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS6_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 2.330e-21 Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 1
Query: 1 QDINSASNVLDLLQARVRSTEALVMVKLDIARNRILTAGLIFSMGSTCFTLGTLISGLFGTNV 189
QDINS NVL+LLQ R RSTEALVMVKLDIARNRILTAGL+FSM STC T G L+SG+FG N+
Sbjct: 459 QDINSIYNVLELLQNRARSTEALVMVKLDIARNRILTAGLVFSMASTCLTAGALVSGIFGMNL 521
BLAST of mRNA_H-paniculata_contig4391.11134.1 vs. uniprot
Match: A0A835YW71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW71_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 6.230e-11 Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 1 QDINSASNVLDLLQARVRSTEALVM---VKLDIARNRILTAGLIFSMGSTCFTLGTLISGLFGTNV 189
Q+I S SNVL+ + +R+R+TE L+ VKLDIARN++LTA IFS+ + C + G +I+GLFG N+
Sbjct: 88 QEITSLSNVLEGMGSRMRNTETLIQARDVKLDIARNQLLTASTIFSLVAMCLSFGAVITGLFGMNL 153
BLAST of mRNA_H-paniculata_contig4391.11134.1 vs. uniprot
Match: A0A662X5B8_9STRA (Magnesium transporter n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X5B8_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 4.450e-8 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 1 QDINSASNVLDLLQARVRSTEALVMVKLDIARNRILTAGLIFSMGSTCFTLGTLISGLFGTNV 189
QDI S +L+Q R+ +TE+LV +KLD RN +L LIFS+ + ++GTLISGLFGTN+
Sbjct: 251 QDIFSTRTRAELMQHRITNTESLVTLKLDSKRNYLLGVQLIFSLVAINISVGTLISGLFGTNL 313
BLAST of mRNA_H-paniculata_contig4391.11134.1 vs. uniprot
Match: W7T887_9STRA (Metal ion transporter family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T887_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 7.690e-8 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 4 DINSASNVLDLLQARVRSTEALVMVKLDIARNRILTAGLIFSMGSTCFTLGTLISGLFGTNV 189
D N +L++ +++TE V VKLD+ARN++LT G +F++ + CF G LISG+FG N+
Sbjct: 195 DFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNL 256
BLAST of mRNA_H-paniculata_contig4391.11134.1 vs. uniprot
Match: A0A4D9CUN0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUN0_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 8.710e-8 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 4 DINSASNVLDLLQARVRSTEALVMVKLDIARNRILTAGLIFSMGSTCFTLGTLISGLFGTNV 189
D N +L++ +++TE V VKLD+ARN++LT G +F++ + CF G LISG+FG N+
Sbjct: 550 DFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNL 611
BLAST of mRNA_H-paniculata_contig4391.11134.1 vs. uniprot
Match: A0A8K1CGQ0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGQ0_PYTOL) HSP 1 Score: 56.2 bits (134), Expect = 1.160e-7 Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 1 QDINSASNVLDLLQARVRSTEALVMVKLDIARNRILTAGLIFSMGSTCFTLGTLISGLFGTNV 189
+DI + +LLQ RV+STE+L+ +KLD ARN +L LIFS+ +GTLI+G+FG N+
Sbjct: 267 KDIYTTRTKSELLQHRVQSTESLITMKLDYARNYLLALQLIFSLAGVGLGVGTLIAGIFGMNL 329
BLAST of mRNA_H-paniculata_contig4391.11134.1 vs. uniprot
Match: A0A662Y750_9STRA (Magnesium transporter (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y750_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 3.010e-7 Identity = 30/63 (47.62%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 1 QDINSASNVLDLLQARVRSTEALVMVKLDIARNRILTAGLIFSMGSTCFTLGTLISGLFGTNV 189
QDI S +L+Q R+ +TE+L+ +KLD RN +L LIFS+ + ++GTLISG+FGTN+
Sbjct: 358 QDIFSTRTRAELMQHRITNTESLMTLKLDSKRNYLLGVQLIFSLVAINISVGTLISGVFGTNL 420
BLAST of mRNA_H-paniculata_contig4391.11134.1 vs. uniprot
Match: A0A7S3Y961_HETAK (Magnesium transporter n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y961_HETAK) HSP 1 Score: 54.3 bits (129), Expect = 5.350e-7 Identity = 24/63 (38.10%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 1 QDINSASNVLDLLQARVRSTEALVMVKLDIARNRILTAGLIFSMGSTCFTLGTLISGLFGTNV 189
Q+ ++ N L++LQ+++ + E+LV++KLD+ARN++LTA IF++ S C G+ + G N+
Sbjct: 219 QEFGTSYNRLEILQSKLENAESLVLMKLDVARNKLLTASTIFALVSMCTGFGSFFGSIMGMNL 281
BLAST of mRNA_H-paniculata_contig4391.11134.1 vs. uniprot
Match: A0A8K1FGW3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGW3_PYTOL) HSP 1 Score: 53.1 bits (126), Expect = 1.430e-6 Identity = 26/63 (41.27%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 1 QDINSASNVLDLLQARVRSTEALVMVKLDIARNRILTAGLIFSMGSTCFTLGTLISGLFGTNV 189
Q+I++ + LLQ R+ +TE+ VM+KLD ARN +LT ++FS+ + FT G ++ FG N+
Sbjct: 305 QEIHTICTKIKLLQDRIHNTESHVMLKLDSARNHLLTVDVLFSLLTVSFTFGMFVTAAFGMNL 367 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4391.11134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4391.11134.1 >prot_H-paniculata_contig4391.11134.1 ID=prot_H-paniculata_contig4391.11134.1|Name=mRNA_H-paniculata_contig4391.11134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=63bp QDINSASNVLDLLQARVRSTEALVMVKLDIARNRILTAGLIFSMGSTCFTback to top mRNA from alignment at H-paniculata_contig4391:14757..14945- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4391.11134.1 ID=mRNA_H-paniculata_contig4391.11134.1|Name=mRNA_H-paniculata_contig4391.11134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=189bp|location=Sequence derived from alignment at H-paniculata_contig4391:14757..14945- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4391:14757..14945- >mRNA_H-paniculata_contig4391.11134.1 ID=mRNA_H-paniculata_contig4391.11134.1|Name=mRNA_H-paniculata_contig4391.11134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=378bp|location=Sequence derived from alignment at H-paniculata_contig4391:14757..14945- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |