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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 6 |
| Model size | 754 |
| Cds size | 480 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4344.11068.1 >prot_H-paniculata_contig4344.11068.1 ID=prot_H-paniculata_contig4344.11068.1|Name=mRNA_H-paniculata_contig4344.11068.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bp
MQRTVVSLVVGCLALTGGTTAQEIIEVNTWSDSLIFFGESSSELANYCGS
TAENTGGCELRAALAFAATLVGSDVIITVTAGQDLVLTQAQPIQISGPGT
LTVNGQGHTVRDEAGDSHFLVSGSIEVNLVNTTFEAFHSTGGETVNGVVV
SASDSDSPG* back to topmRNA from alignment at H-paniculata_contig4344:11695..14132- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4344.11068.1 ID=mRNA_H-paniculata_contig4344.11068.1|Name=mRNA_H-paniculata_contig4344.11068.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2438bp|location=Sequence derived from alignment at H-paniculata_contig4344:11695..14132- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCAGTAGTAGCAGTGGTAGCAGTAACAATAGTGCCCGCCGATGGAAAGG
GACTGCTTTGGCGAGAATGCAGAGAACAGTCGTTTCGCTTGTAGTCGGAT
GTTTGGCTCTGACTGGCGGCACGACAGCGCAAGAAATCATCGAGGTATGA
CTGTGTTAGTCCCATGTCTAGCTCCTAATTGATAGCACACATGGCCACAG
CTAGTCGGACAGCTGTGGCTATGTCCAGGTGCGGCTGTCGCTCCTATGTT
AAGCTAGCGGCGCCTGAGGCAATCCGATGCTTCCTAGAATGAAACAAATC
CTCCTCTTAGTACCTTCGTTTCGCGGACACGATGAACTTGTGCTTTCGTC
ATACCAGCCAAGCATAACTTTCATAGCTGAAGCGTGTGCCTGAGTCAACG
AGCGAACAGTTTACGAGGGCTTCCGTGCACACTTATCGTAGAGGAGAAGG
TGGGAAATGCTTGAGAAGGAAGACTCGAAATGTCCTATGGCTGCCCACCT
TTCAGGAATTGGAAGCCAACTTTAAGGCACCCAGCAAGTACGAGAGTCGC
GCTCCTCGGCGTTTTTGAGACCAAATAAGACGTAAAACATGGTTTCAAAT
GACTCGCTAGTTGACGTTCCGAAAAGTCGCGCAGCAGGTGATTATAGCAC
GTGTTCAACTGCTAGTAACATATGCGTCAAGTGCTGCTGTCGAATTCTAA
AATGTGCGGAGCTCTATGTGATTCACGTTTACCCCCATTCTGCTCACCAG
GTTAATACTTGGTCGGACAGTCTTATCTTTTTTGGCGAAAGTTCGTCGGA
GCTTGCAAATTACTGCGGGTCGACTGCAGAAAACACCGGGGGCTGCGAGC
TAAGGGCGGCTCTTGCTTTCGCTGCTACTTTGGTCGGAAGCGATGTGATC
ATTACAGTCACGGCAGGGCAGGACCTGGTACTCACACAGGCTCAGCCAAT
ACAAATATCAGGGTAAGATATACAAACAAAGATGACGATGAGCTGCCTTG
AAGGTCAGACAATGGAGGTCGACCAGCTACGACGTTGATTTGAGGAACCT
ATGTAATTTTATCGGTTTCTCCTGCTTTTGTTCATTTTTGGGGCTCATCA
GATTGGTACTTGCTTCAACAATTCACTGTGCCTACGTTCGAATCACGCGG
CAAAGACTACCAACTGCCTTCCACAGACAAGCCGCTCACAGAATTGATAC
CTAAAATTGATGACAAGTTTCCACGCTGTATGGTCCAAGCGCATCTTGTT
TTGCATTCGTGGCTATCTATATCGATAATAGACCGGAAATCGTTTCGAGT
GAGTTCGGTATTTCCAGCATGCACTAGCTTGTTTAATATGCGAACGGTAT
AAGCGTGTCTCATCGTGATATTGTTCTGCAGTCCGGGCACTTTGACGGTG
AACGGCCAGGGGCATACAGTGAGAGACGAAGCCGGAGATTCACATTTCCT
CGTTTCGGGATCAATTGAAGTGAACTTGGTCAACACCACATTCGAGGCTT
TTCATTCCACTGGAGGAGAGGTGGGATATAAAACTGAGGTTTACTGCGGC
TAATTCCATCAAGAGGTTCTATTAACTTTCGCGGCGTGTTACTATCTTTC
GCACAGGCTAATTACAGCAGGATTAGCTATACGATGGTTGCCGGCGCCCC
TTCTCCAAGCTCATCATGTGTTCGGAGTACCACCGTGGTCCATAGAAAAT
AATTCATGCAGTACATTGCACAGTTGCAGTTCACTAGACAATTGCAATCC
TTCTACTCGAGATACTAGTCTGCACAAAGATTTCAACTGCTGAAGAATTC
ACTTTCTCCTGTGTCTAAAAGTTGAATCCATCGTGCATAATGCTTCTCGC
AGACGGTGAATGGCGTAGTCGTCTCAGCCAGTGACTCTGATTCATCCTTG
GCCATCAGCGATTGTGCCTTCCGGCATTCTCATGTCGAAGGAATTGGTGC
AAGTGCCGGGATAGGTGGGGTCATCTACGCTACGGGCACCCTTAGCATCC
ATGATAGTGTGTTCGAAGACAATGTGATGTCAGCTACGCTCACACCCGCT
CCAGTGGTATCATCTGCACCATCTCCTACAGTCACACCCAACCAGGTGTA
GTGTCTACGAAGGGGATGAATTTTATGAATAGTAAGAGTAAACCTTGCTC
CCTGACGAGGATACGATACCATAAACATGACGTTGCACACCTGTGACACC
ATCTGGTGCGCCCTTTGCCTCTGTTCTGATAATTTAATGAATCTACTTGG
TTCGAACGCATTTCACACGAATTGGAAGGTAGATTCTCCACCGATCGGTG
TGCCCCCTGGTCGCACCCTCCTTCGTGTTTGTCCCTCACAAACTTGGTGC
CAATGGGACAGGTAGAACCAACTATTTCACCACGAATAACAGTAACAGCG
CAACCGTCTGAGGAACGTGAGGCCCGCAACACTCCGGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig4344:11695..14132- >mRNA_H-paniculata_contig4344.11068.1 ID=mRNA_H-paniculata_contig4344.11068.1|Name=mRNA_H-paniculata_contig4344.11068.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=960bp|location=Sequence derived from alignment at H-paniculata_contig4344:11695..14132- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAGAGAACAGTCGTTTCGCTTGTAGTCGGATGTTTGGCTCTGACTGG
CGGCACGACAGCGCAAGAAATCATCGAGATGCAGAGAACAGTCGTTTCGC
TTGTAGTCGGATGTTTGGCTCTGACTGGCGGCACGACAGCGCAAGAAATC
ATCGAGGTTAATACTTGGTCGGACAGTCTTATCTTTTTTGGCGAAAGTTC
GTCGGAGCTTGCAAATTACTGCGGGTCGACTGCAGAAAACACCGGGGGCT
GCGAGCTAAGGGCGGCTCTTGCTTTCGCTGCTACTTTGGTCGGAAGCGAT
GTGATCATTACAGTCACGGCAGGGCAGGACCTGGTACTCACACAGGCTCA
GCCAATACAAATATCAGGGTTAATACTTGGTCGGACAGTCTTATCTTTTT
TGGCGAAAGTTCGTCGGAGCTTGCAAATTACTGCGGGTCGACTGCAGAAA
ACACCGGGGGCTGCGAGCTAAGGGCGGCTCTTGCTTTCGCTGCTACTTTG
GTCGGAAGCGATGTGATCATTACAGTCACGGCAGGGCAGGACCTGGTACT
CACACAGGCTCAGCCAATACAAATATCAGGTCCGGGCACTTTGACGGTGA
ACGGCCAGGGGCATACAGTGAGAGACGAAGCCGGAGATTCACATTTCCTC
GTTTCGGGATCAATTGAAGTGAACTTGGTCAACACCACATTCGAGGCTTT
TCATTCCACTGGAGGAGAGTCCGGGCACTTTGACGGTGAACGGCCAGGGG
CATACAGTGAGAGACGAAGCCGGAGATTCACATTTCCTCGTTTCGGGATC
AATTGAAGTGAACTTGGTCAACACCACATTCGAGGCTTTTCATTCCACTG
GAGGAGAGACGGTGAATGGCGTAGTCGTCTCAGCCAGTGACTCTGATTCA
ACGGTGAATGGCGTAGTCGTCTCAGCCAGTGACTCTGATTCACCGGGATA
GCCGGGATAG back to top
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