mRNA_H-paniculata_contig430.10987.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig430.10987.1 vs. uniprot
Match: D8LE23_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE23_ECTSI) HSP 1 Score: 412 bits (1059), Expect = 2.820e-141 Identity = 198/260 (76.15%), Postives = 227/260 (87.31%), Query Frame = 3
Query: 210 AAASMAEISASNQGNWALILDCDGVILESESLHREAYNAVFREFRVDYNWSPEYYDVLQNKVGGGKPKMRFYFGENGWPASKLGPPPTSDAEKDDLVDALQDRKTMIYKEYIADGTAVLRPGIQRLIDEASVIPGGKMAICSASTKDSCLFVLDNLLGKGNLDKFDLILAGDDVPRRKPDPMIYTLASEKLGIAPQRCVVIEDSLIGLEAALGASMSCIITHTESTKDQEFLGALGVYSELGNDGSVQVRASDLLKLIGV 989
A + + +S+ WA+I DCDGVILESESLHREAYNAVFREF VDY WSPEYYD LQNKVGGGKPKMR+YFGENGWP SKLG PP +D EKD L+D+LQDRKT IYKE++A+GTAVLRPG+QRLIDE I GGKMAICSASTKD+CLFVLDNLLG+ NL KFDL+LAGDDVPRRKPDPMIY LASEKLG+ P+RC+VIEDSLIGLEAALGA M+C+IT+T ST+ Q+F G+LGVY ELG++GS QVRAS+LLKL+GV
Sbjct: 42 AVSRPLQSGSSSPPEWAVIFDCDGVILESESLHREAYNAVFREFAVDYEWSPEYYDELQNKVGGGKPKMRYYFGENGWPKSKLGAPPETDQEKDLLIDSLQDRKTDIYKEFVANGTAVLRPGVQRLIDETKAISGGKMAICSASTKDACLFVLDNLLGEENLSKFDLVLAGDDVPRRKPDPMIYALASEKLGVPPERCMVIEDSLIGLEAALGAKMNCVITYTGSTESQDFAGSLGVYPELGDEGSTQVRASELLKLMGV 301
BLAST of mRNA_H-paniculata_contig430.10987.1 vs. uniprot
Match: A0A835YN75_9STRA (Haloacid dehalogenase-like hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN75_9STRA) HSP 1 Score: 362 bits (929), Expect = 1.280e-121 Identity = 173/260 (66.54%), Postives = 205/260 (78.85%), Query Frame = 3
Query: 207 PAAASMAEISASNQGN-WALILDCDGVILESESLHREAYNAVFREFRVDYNWSPEYYDVLQNKVGGGKPKMRFYFGENGWPASKLGPPPTSDAEKDDLVDALQDRKTMIYKEYIADGTAVLRPGIQRLIDEASVIPGGKMAICSASTKDSCLFVLDNLLGKGNLDKFDLILAGDDVPRRKPDPMIYTLASEKLGIAPQRCVVIEDSLIGLEAALGASMSCIITHTESTKDQEFLGALGVYSELGNDGSVQVRASDLLKLI 983
PA ++ ++ S + + W LI DCDGVILESE LHR+AYNAVF+EF VDYNWSPEYYD LQN +GGGKPKMR YFG NGWPASKLGPPP+ A++D L+DALQDRKT IYKE IA GT +RPG RL+DEA +PG K+AICSASTKD+C+FVLDNLLGK L KF+++LAGDDV RRKPDP IY LASE LG+ RC+V+EDSLIGL+AALGA M C+ITHT ST Q+F GA+ VY ELG+ VQV A L ++
Sbjct: 31 PAVSNRVSMTTSPESSSWGLIFDCDGVILESEGLHRDAYNAVFKEFEVDYNWSPEYYDELQNLIGGGKPKMRHYFGVNGWPASKLGPPPSESADQDALIDALQDRKTEIYKEMIASGTVPVRPGFNRLVDEALALPGAKLAICSASTKDACVFVLDNLLGKEQLAKFEVVLAGDDVERRKPDPSIYVLASEMLGVPADRCIVVEDSLIGLQAALGAQMRCVITHTPSTATQDFSGAIAVYPELGDGDGVQVTAQQLYDML 290
BLAST of mRNA_H-paniculata_contig430.10987.1 vs. uniprot
Match: W7T531_9STRA (Haloacid dehalogenase-like hydrolase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T531_9STRA) HSP 1 Score: 323 bits (828), Expect = 3.860e-106 Identity = 175/300 (58.33%), Postives = 211/300 (70.33%), Query Frame = 3
Query: 87 TLSSMMLCKQQVALTAAFLAPTWGFLPPPSCRVPVSRKPGPAAASMAEISASNQGNWALILDCDGVILESESLHREAYNAVFREFRVDYNWSPEYYDVLQNKVGGGKPKMRFYFGENGWPASKLGPPPTSDAEKDDLVDALQDRKTMIYKEYIADGTAVLRPGIQRLIDEASVIPGG--KMAICSASTKDSCLFVLDNLLGKGNLDKFDLILAGDDVPRRKPDPMIYTLASEKLGIAPQRCVVIEDSLIGLEAALGASMSCIITHTESTKDQEFLGALGVYSELGNDGSVQVRASDLLKL 980
TLS +++ VAL+ AF++P P + P + P ++ AS +WALI DCDGVILESESLHREAYN VFREF +DY W EYYD LQNKVGGG PKMR++FGENGWP S LG PT + + D+++ALQ+RKT IYK+ I GTA +RPG+ RLI+EA + K+AICSASTK SCLFVLDNLL L FDLILAGDDV RKPDP IY LASE+L I R VVIEDSLIGL+AALGA M C+ITHT STK Q+F A V+SELG+ VQV A +L+++
Sbjct: 6 TLSLLLIVVSAVALSQAFVSPLSSVYKPATSTQP-GQLPHRTVTWLSAGRASR--DWALIFDCDGVILESESLHREAYNTVFREFEIDYRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTLGAAPTEEKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGDGNHVQVTARELMEI 302
BLAST of mRNA_H-paniculata_contig430.10987.1 vs. uniprot
Match: A0A0G4G1V6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G1V6_VITBC) HSP 1 Score: 317 bits (811), Expect = 5.950e-103 Identity = 159/260 (61.15%), Postives = 194/260 (74.62%), Query Frame = 3
Query: 207 PAAASMAEISASNQGN-WALILDCDGVILESESLHREAYNAVFREFRVDYNWSPEYYDVLQNKVGGGKPKMRFYFGENGWPASKLGPPPTSDAEKDDLVDALQDRKTMIYKEYIADGTAVLRPGIQRLIDEASVIPGGKMAICSASTKDSCLFVLDNLLGKGNLDKFDLILAGDDVPRRKPDPMIYTLASEKLGIAPQRCVVIEDSLIGLEAALGASMSCIITHTESTKDQEFLGALGVYSELGNDGSVQVRASDLLKLI 983
P +AS+ AS + WALI DCDGVI+ESE LHR+AYNA+FREF + Y W+PEYYDVLQN +GGG PKMR YF ENGWP+S LGPPP ++ ++ LQDRKT+IYK +I++GTA RPG+ R+++EA PG K+AICSASTK SCLFVL+NLLGK L +FDLILAGDDV RKP P IY ASE+L I P RC+VIEDSLIGL+AAL A M C+ITHT ST DQ F GA GVY+++ V A+DL ++
Sbjct: 84 PLSASVMSGGASQASDEWALIFDCDGVIIESEGLHRDAYNAMFREFAIPYEWTPEYYDVLQNMIGGGIPKMRHYFTENGWPSSTLGPPPADTDGREGMLKTLQDRKTIIYKSFISEGTAQPRPGVLRVMEEAMRTPGTKLAICSASTKSSCLFVLENLLGKDLLSRFDLILAGDDVTHRKPHPEIYHAASERLAIPPSRCLVIEDSLIGLQAALQADMKCVITHTHSTGDQVFDGAEGVYADMS-----LVTAADLRGMV 338
BLAST of mRNA_H-paniculata_contig430.10987.1 vs. uniprot
Match: A0A7S0ZDV9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDV9_9RHOD) HSP 1 Score: 293 bits (751), Expect = 1.060e-94 Identity = 150/243 (61.73%), Postives = 181/243 (74.49%), Query Frame = 3
Query: 219 SMAEISASNQGNWALILDCDGVILESESLHREAYNAVFREFRVDYNWSPEYYDVLQNKVGGGKPKMRFYFGENGWPASKLGPPPTSDAEKDDLVDALQDRKTMIYKEYIADGTAVLRPGIQRLIDEA---SVIPGGKMAICSASTKDSCLFVLDNLLGKGNLDKFDLILAGDDVPRRKPDPMIYTLASEKLGIAPQRCVVIEDSLIGLEAALGASMSCIITHTESTKDQEFLGALGVYSELGN 938
SM+ S S+ ALI DCDGVILESE+LHREAYN FREF V+Y+WS EYYD LQN+VGGGKPKMR YFG +GWP SKLG P S ++D L+D+LQDRKT IY+E+IA+G AV RPGI L+D A ++AICSASTK+SCLFVL NLLG + FDLILAGDDVP +KPDPMIYT+ SE++G+ P +C+VIEDS IGL AA A M C IT+T ST+ Q+F GA V +L +
Sbjct: 39 SMSSSSTSHGTAQALIFDCDGVILESEALHREAYNQAFREFDVNYHWSEEYYDELQNQVGGGKPKMRHYFGIHGWPDSKLGTSPESQEDRDFLIDSLQDRKTQIYQEFIANGVAVARPGILELMDSALEQRKERNLRVAICSASTKESCLFVLKNLLGLDRFNSFDLILAGDDVPNKKPDPMIYTVCSERIGVDPSQCIVIEDSKIGLLAAQSAGMKCWITYTSSTEKQDFSGAEKVLPDLSS 281
BLAST of mRNA_H-paniculata_contig430.10987.1 vs. uniprot
Match: A0A4D9D0C1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0C1_9STRA) HSP 1 Score: 289 bits (739), Expect = 1.140e-93 Identity = 148/232 (63.79%), Postives = 175/232 (75.43%), Query Frame = 3
Query: 291 ESESLHREAYNAVFREFRVDYNWSPEYYDVLQNKVGGGKPKMRFYFGENGWPASKLGPPPTSDAEKDDLVDALQDRKTMIYKEYIADGTAVLRPGIQRLIDEASVIPGG--KMAICSASTKDSCLFVLDNLLGKGNLDKFDLILAGDDVPRRKPDPMIYTLASEKLGIAPQRCVVIEDSLIGLEAALGASMSCIITHTESTKDQEFLGALGVYSELGNDGSVQVRASDLLKL 980
+SESLHREAYN +FREF +DY W EYYD LQNKV GG PKMR+YFGENGWP S LG PT + ++D+++ALQ+RKT IYK+ I GTA +RPG+ RLI+EA + K+AICSASTK SCLFVLDNLL L FDLILAGDDV RKPDP IY LASE+L I R VVIEDSLIGL+AALGA M C+ITHT STK Q+F A V+SELG+ VQV A +L+++
Sbjct: 3 QSESLHREAYNTMFREFEIDYRWDEEYYDQLQNKVAGGIPKMRYYFGENGWPTSTLGAAPTEEKGREDILNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKTSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGDGNHVQVTARELMEI 234
BLAST of mRNA_H-paniculata_contig430.10987.1 vs. uniprot
Match: A0A812SI76_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SI76_9DINO) HSP 1 Score: 274 bits (700), Expect = 5.550e-85 Identity = 137/233 (58.80%), Postives = 169/233 (72.53%), Query Frame = 3
Query: 222 MAEISASNQGNWALILDCDGVILESESLHREAYNAVFREFRVDYNWSPEYYDVLQNKVGGGKPKMRFYFGENGWPASKLGPPPTSDAEKDDLVDALQDRKTMIYKEYIADGTAVLRPGIQRLIDEASVIPGGKMAICSASTKDSCLFVLDNLLGKGNLDKFDLILAGDDVPRRKPDPMIYTLASEKLGIAPQRCVVIEDSLIGLEAALGASMSCIITHTESTKDQEFLGALGV 920
M+ +A AL+LDCDGVI +SE LHREAYN VF EF VD WS EYYDVLQNK+GGGKPKMR++FGE GWP S GPPP + ++ L+DALQDRKT IY+ Y+ G A RPGI LI+E +MAICSA TK++ VL ++G+ L++FDLIL GDDV R+KPDP+IY LASE+LG+ +RC V+EDS IGLEAAL A M C IT+T+ST+ Q+F GA V
Sbjct: 199 MSAKTAGADSLQALLLDCDGVIADSEYLHREAYNEVFAEFEVDAVWSKEYYDVLQNKIGGGKPKMRYHFGEVGWPTSVKGPPPEDEMSREALIDALQDRKTDIYRGYVTSGKASARPGILALIEEGLQRRNLRMAICSAGTKEAAQQVLSAVVGEDLLEQFDLILLGDDVSRKKPDPLIYKLASERLGVPAERCAVVEDSKIGLEAALAAGMRCFITYTDSTQGQDFSGATEV 431
BLAST of mRNA_H-paniculata_contig430.10987.1 vs. uniprot
Match: A0A5J4YM40_PORPP (Haloacid dehalogenase-like hydrolase domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YM40_PORPP) HSP 1 Score: 270 bits (690), Expect = 6.220e-83 Identity = 150/258 (58.14%), Postives = 171/258 (66.28%), Query Frame = 3
Query: 207 PAAASMAEISASNQGNW----ALILDCDGVILESESLHREAYNAVFREFRVDYNWSPEYYDVLQNKVGGGKPKMRFYFGENGWPASKLGPPPTSDAEKDD-LVDALQDRKTMIYKEYIADGTAVLRPGIQRLIDEASVIPGG---KMAICSASTKDSCLFVLDNLLGKGNLDKFDLILAGDDVPRRKPDPMIYTLASEKLGIAP-------QRCVVIEDSLIGLEAALGASMSCIITHTESTKDQEFLGALGVYSELG 935
PA A + + G+ ALI DCDGVILESESLHREAYN VFREF + Y WS EYYD LQNKVGGGKPKMR+YF + GWP S L P P D E LVD LQDRKT IYKE+IA G A RPGI RL+DEA K+AICSASTK SCLF LDNL+G L FD+ILAGDDVP++KPDPMIY + E+L A +C+V+EDS IGL+AA A M CIIT+T ST Q+ A V LG
Sbjct: 197 PAVCMCAGLDGRSGGSLSSARALIFDCDGVILESESLHREAYNQVFREFNIAYEWSEEYYDGLQNKVGGGKPKMRYYFNKYGWPDSSLFPAPQDDEEAQTRLVDELQDRKTEIYKEFIATGVAKQRPGILRLMDEAIAAKQRLNLKLAICSASTKSSCLFTLDNLVGPERLKHFDVILAGDDVPQKKPDPMIYNVCLERLSSAGGGVRIDRAQCLVVEDSKIGLQAAKDAGMKCIITYTPSTASQDMSDADAVIPNLG 454
BLAST of mRNA_H-paniculata_contig430.10987.1 vs. uniprot
Match: A0A8J4AY49_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AY49_9CHLO) HSP 1 Score: 262 bits (669), Expect = 2.670e-82 Identity = 141/265 (53.21%), Postives = 174/265 (65.66%), Query Frame = 3
Query: 207 PAAASMAEISASNQGNWALILDCDGVILESESLHREAYNAVFREFRVD-------YNWSPEYYDVLQNKVGGGKPKMRFYFGENGWPASKL--GPPPTSDAEKDDLVDALQDRKTMIYKEYIADGTAVLRPGIQRLIDEASVIPGGKMAICSASTKDSCLFVLDNLLGKGNLDKFDLILAGDDVPRRKPDPMIYTLASEKLGIAPQRCVVIEDSLIGLEAALGASMSCIITHTESTKDQEFLGALGVYSELGNDGSVQVRASDLL 974
P A+S+ +A ALI DCDGVILESE LHR AYNA F+ F V NW +YD+LQN VGGGKPKMR+YF NGWP S + G P +DAE+ L+D LQD KT Y++ I G RPG+ RL+DEA G K+A+CSA+TK S +F L NLLG+G D LAGDDV ++KPDP IY +A+E+LG++P CVV+EDS+IGL+AA GA M CIIT+T STK QEF GA V ELG+ V V L+
Sbjct: 30 PRASSLVARAAMK----ALIFDCDGVILESEDLHRRAYNATFKHFNVKCGGEQGYVNWDESFYDMLQNTVGGGKPKMRWYFKRNGWPTSSVLDGRVPANDAEQAQLIDTLQDWKTDKYQQMIGSGEVEPRPGVLRLMDEARAA-GLKLAVCSAATKSSVVFTLKNLLGEGRFQGLDCFLAGDDVDKKKPDPKIYRVAAERLGLSPAECVVVEDSMIGLQAATGAGMRCIITYTPSTKSQEFNGAELVVPELGDGAHVNVTVKHLM 289
BLAST of mRNA_H-paniculata_contig430.10987.1 vs. uniprot
Match: A0A2I4GG78_JUGRE (haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 n=6 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4GG78_JUGRE) HSP 1 Score: 260 bits (664), Expect = 2.760e-81 Identity = 139/274 (50.73%), Postives = 180/274 (65.69%), Query Frame = 3
Query: 180 RVPVSRKPGPAAASMAEISASNQGNWALILDCDGVILESESLHREAYNAVFREFRV---------DYNWSPEYYDVLQNKVGGGKPKMRFYFGENGWPASKL-GPPPTSDAEKDDLVDALQDRKTMIYKEYIADGTAVLRPGIQRLIDEASVIPGGKMAICSASTKDSCLFVLDNLLGKGNLDKFDLILAGDDVPRRKPDPMIYTLASEKLGIAPQRCVVIEDSLIGLEAALGASMSCIITHTESTKDQEFLGALGVYSELGNDGSVQVRASDL 971
R P RK A+ +S+SNQ AL+ DCDGVILESE LHR+AYN F F V NW ++YD LQN++GGGKPKMR+YFGE+GWP+S + PP +D ++ L+D LQD KT YKE I GT RPG+ RL+DEA G K+A+CSA+TK S + L+NL+G D LAGDDV +KPDP IY AS++LG++PQ C+V+EDS+IGL+AA GA MSC+IT+T ST +Q+F A+ +Y +L N VR DL
Sbjct: 39 RFPTLRKSF-ASERRLSVSSSNQFQ-ALVFDCDGVILESEHLHRQAYNDAFAHFNVRCPSSQLQHPLNWGSDFYDELQNRIGGGKPKMRWYFGEHGWPSSTIFEKPPEADVDRVKLIDTLQDWKTERYKEIIKSGTVEPRPGVLRLMDEAKAA-GKKLAVCSAATKSSVILCLENLIGIERFQSLDCFLAGDDVKEKKPDPSIYLTASKRLGVSPQDCLVVEDSIIGLQAATGAGMSCVITYTSSTANQDFKDAIAIYPDLSN-----VRLEDL 304 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig430.10987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig430.10987.1 >prot_H-paniculata_contig430.10987.1 ID=prot_H-paniculata_contig430.10987.1|Name=mRNA_H-paniculata_contig430.10987.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=300bp MMLCKQQVALTAAFLAPTWGFLPPPSCRVPVSRKPGPAAASMAEISASNQback to top mRNA from alignment at H-paniculata_contig430:24123..36653+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig430.10987.1 ID=mRNA_H-paniculata_contig430.10987.1|Name=mRNA_H-paniculata_contig430.10987.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12531bp|location=Sequence derived from alignment at H-paniculata_contig430:24123..36653+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig430:24123..36653+ >mRNA_H-paniculata_contig430.10987.1 ID=mRNA_H-paniculata_contig430.10987.1|Name=mRNA_H-paniculata_contig430.10987.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1800bp|location=Sequence derived from alignment at H-paniculata_contig430:24123..36653+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |