mRNA_H-paniculata_contig42775.10943.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig42775.10943.1 vs. uniprot
Match: D8LSH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH0_ECTSI) HSP 1 Score: 158 bits (399), Expect = 3.200e-45 Identity = 78/105 (74.29%), Postives = 92/105 (87.62%), Query Frame = 1
Query: 31 IQVLYQLTATDRNGDVRHFEKPLFLTMLMFVAMACALPIYSILQRWQAPEDRAPKVPARVLWWLVVPSLFDLAGTSMAQMGLLFTTVSYYQLLRCTVIVVTAFLK 345
I++LYQ+++TD G+ RHFEKPLFLT +MFVAM+ ALPIY + Q +APEDR PKVP RVL WLVVPS+FDLAGT+ AQ+GLLFTTVSY+QLLRCTVIVVTAFLK
Sbjct: 32 IKMLYQMSSTDVAGNERHFEKPLFLTFIMFVAMSAALPIYYVQQLLKAPEDRPPKVPGRVLGWLVVPSIFDLAGTNFAQIGLLFTTVSYFQLLRCTVIVVTAFLK 136
BLAST of mRNA_H-paniculata_contig42775.10943.1 vs. uniprot
Match: A0A6H5KUQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ5_9PHAE) HSP 1 Score: 158 bits (399), Expect = 8.750e-45 Identity = 78/105 (74.29%), Postives = 92/105 (87.62%), Query Frame = 1
Query: 31 IQVLYQLTATDRNGDVRHFEKPLFLTMLMFVAMACALPIYSILQRWQAPEDRAPKVPARVLWWLVVPSLFDLAGTSMAQMGLLFTTVSYYQLLRCTVIVVTAFLK 345
I++LYQ+++TD G+ RHFEKPLFLT +MFVAM+ ALPIY + Q +APEDR PKVP RVL WLVVPS+FDLAGT+ AQ+GLLFTTVSY+QLLRCTVIVVTAFLK
Sbjct: 32 IKMLYQMSSTDIAGNERHFEKPLFLTFIMFVAMSAALPIYYVQQLLKAPEDRPPKVPGRVLGWLVVPSIFDLAGTNFAQIGLLFTTVSYFQLLRCTVIVVTAFLK 136
BLAST of mRNA_H-paniculata_contig42775.10943.1 vs. uniprot
Match: A0A836CAF8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF8_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.400e-33 Identity = 65/105 (61.90%), Postives = 82/105 (78.10%), Query Frame = 1
Query: 31 IQVLYQLTATDRNGDVRHFEKPLFLTMLMFVAMACALPIYSILQRWQAPEDRAPKVPARVLWWLVVPSLFDLAGTSMAQMGLLFTTVSYYQLLRCTVIVVTAFLK 345
I++LYQ +A D G + HFEKP+ LT +MFVAMA ALP + + Q + P +RA VP RVL WL +PS+FDL GT+ AQ+GL++TTVSY+QLLRCTVIVVTAFLK
Sbjct: 33 IKLLYQQSAVDSTGAISHFEKPMLLTFIMFVAMAFALPCFMVQQMLKPPAERAT-VPRRVLLWLAIPSVFDLLGTNFAQIGLVYTTVSYFQLLRCTVIVVTAFLK 136
BLAST of mRNA_H-paniculata_contig42775.10943.1 vs. uniprot
Match: A0A024UGN4_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024UGN4_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 6.750e-20 Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 34 QVLYQLTATDRNGDVRHFEKPLFLTMLMFVAMACALPI-----YSILQRWQAPED------RAPKVPARVLWWLVVPSLFDLAGTSMAQMGLLFTTVSYYQLLRCTVIVVTAFLKV 348
+V+Y + A NG+ R FEKP+F T+LMF AM ALPI + + ++W A R ++P R + L +P+ FDL GT +A +GLL+ TVS +QL++CTVI+ A LKV
Sbjct: 26 KVMYDIDAVGLNGETRKFEKPIFQTLLMFAAMIFALPIQWAYHWHLERKWHANGGKSSGFKRPARIPIRTYFILALPAAFDLLGTYLANLGLLYVTVSVFQLMKCTVIIFVALLKV 141
BLAST of mRNA_H-paniculata_contig42775.10943.1 vs. uniprot
Match: A0A7S3UY76_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UY76_HETAK) HSP 1 Score: 92.0 bits (227), Expect = 1.700e-19 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 16 LFLVNIQVLYQLTATDRNGDVRHFEKPLFLTMLMFVAMACALPIYSILQRWQAPEDRAPKVPARVLWWLVVPSLFDLAGTSMAQMGLLFTTVSYYQLLRCTVIVVTAFLKV 348
L + Q LYQ+ + NG ++ + KP+ +MFVAM ALPIY + Q + + +VP RVL + PSLFD+ GT + Q GL++T+ S YQ+LRC VI+ TA LK+
Sbjct: 29 LTTLTCQFLYQMESVGANGYLKPYNKPITTVFVMFVAMMAALPIYWVQQVFFTEPNLRQRVPNRVLLKMAWPSLFDMLGTGLGQAGLVYTSASMYQILRCAVILCTATLKI 139
BLAST of mRNA_H-paniculata_contig42775.10943.1 vs. uniprot
Match: A0A6G0XVI4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVI4_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.330e-19 Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 1
Query: 34 QVLYQLTATDRNGDVRHFEKPLFLTMLMFVAMACALPI-----YSILQRWQAPED------RAPKVPARVLWWLVVPSLFDLAGTSMAQMGLLFTTVSYYQLLRCTVIVVTAFLKV 348
+V+Y + +G+ R FEKP+F TMLMF AM ALPI +++ +W A R ++P R + L +P+ FDL GT +A +GLL+ TVS +QL++CTVI+ A LKV
Sbjct: 26 KVMYDIDTIGLDGETRKFEKPIFQTMLMFAAMVFALPIQWIYHWNLEHQWHAKGGALSGFKRPARIPMRTYFILALPAAFDLLGTYLANLGLLYVTVSVFQLMKCTVIIFVALLKV 141
BLAST of mRNA_H-paniculata_contig42775.10943.1 vs. uniprot
Match: D0N5P1_PHYIT (EamA domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N5P1_PHYIT) HSP 1 Score: 87.0 bits (214), Expect = 5.070e-19 Identity = 46/114 (40.35%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 31 IQVLYQLTATDRNGDVRHFEKPLFLTMLMFVAMACALPI-----YSILQRWQAPEDRAP---KVPARVLWWLVVPSLFDLAGTSMAQMGLLFTTVSYYQLLRCTVIVVTAFLKV 348
+ +LY + + +G+VR FEKP+F T LMF+AM ALPI Y + ++W+ + ++P ++ + L +P+ FDL T +A +GLL+ TVS +QL++CTVI+ A LKV
Sbjct: 23 LYILYGVDSVGLDGEVRKFEKPIFQTWLMFLAMVFALPIHWAYHYHVERQWRNNRNGMKYRYRIPRKMYFLLALPAAFDLLATFVANIGLLYVTVSVFQLMKCTVIIFVALLKV 136
BLAST of mRNA_H-paniculata_contig42775.10943.1 vs. uniprot
Match: A0A485LKZ6_9STRA (Aste57867_22450 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKZ6_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 5.330e-19 Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 1
Query: 34 QVLYQLTATDRNGDVRHFEKPLFLTMLMFVAMACALPI-----YSILQRWQ------APEDRAPKVPARVLWWLVVPSLFDLAGTSMAQMGLLFTTVSYYQLLRCTVIVVTAFLKV 348
+V+Y + A +G+ R FEKP+F T+LMF AM ALPI + + ++W+ + R ++P R + L +P+ FDL GT +A +GLL+ TVS +QL++CTVI+ A LKV
Sbjct: 70 KVMYDIDAVGLDGETRKFEKPIFQTLLMFAAMVFALPIQWLYHWHLERQWETNGGKSSGVKRPTRIPIRTYFILALPAAFDLIGTYLANLGLLYVTVSVFQLMKCTVIIFVAILKV 185
BLAST of mRNA_H-paniculata_contig42775.10943.1 vs. uniprot
Match: F0WQC0_9STRA (Drug/Metabolite Transporter (DMT) Superfamily putat n=2 Tax=Albugo TaxID=65356 RepID=F0WQC0_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.170e-18 Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 1
Query: 34 QVLYQLTATDRNGDVRHFEKPLFLTMLMFVAMACALPIY-----SILQRWQAPEDRAPK----VPARVLWWLVVPSLFDLAGTSMAQMGLLFTTVSYYQLLRCTVIVVTAFLKV 348
++LY + A G+++ FEKP+F T LMF+AM ALPI+ + ++W P K +P R + L P+LFDL T A +GL++ TVS +QL++CTVI+ A LKV
Sbjct: 37 KILYNVDAVGLGGEMKKFEKPIFQTWLMFLAMVFALPIHWAYRWHVERKWSRPSSTPLKFRYRIPRRTYFLLAFPALFDLIATWFANIGLMYVTVSVFQLMKCTVIIFVALLKV 150
BLAST of mRNA_H-paniculata_contig42775.10943.1 vs. uniprot
Match: A0A484EB13_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EB13_BRELC) HSP 1 Score: 88.2 bits (217), Expect = 4.290e-18 Identity = 49/113 (43.36%), Postives = 71/113 (62.83%), Query Frame = 1
Query: 37 VLYQLTATDRNGDVRHFEKPLFLTMLMFVAMACALPI-----YSILQRWQAPEDRAPK----VPARVLWWLVVPSLFDLAGTSMAQMGLLFTTVSYYQLLRCTVIVVTAFLKV 348
+LY + + +G+V+ FEKP+F T LMF+AM ALPI Y + +W+ A K +P R+ + L +P+ FDL T +A +GLL+ TVS +QL++CTVIV A LKV
Sbjct: 33 ILYGVDSIGLDGEVKKFEKPIFQTWLMFLAMVFALPIHWAYHYYVDHQWRRNPRGAMKYHYRIPRRMYFLLAIPAAFDLVATFVANLGLLYVTVSVFQLMKCTVIVFVALLKV 145 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42775.10943.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig42775.10943.1 >prot_H-paniculata_contig42775.10943.1 ID=prot_H-paniculata_contig42775.10943.1|Name=mRNA_H-paniculata_contig42775.10943.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp MQPERLFLVNIQVLYQLTATDRNGDVRHFEKPLFLTMLMFVAMACALPIYback to top mRNA from alignment at H-paniculata_contig42775:710..1610+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig42775.10943.1 ID=mRNA_H-paniculata_contig42775.10943.1|Name=mRNA_H-paniculata_contig42775.10943.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=901bp|location=Sequence derived from alignment at H-paniculata_contig42775:710..1610+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig42775:710..1610+ >mRNA_H-paniculata_contig42775.10943.1 ID=mRNA_H-paniculata_contig42775.10943.1|Name=mRNA_H-paniculata_contig42775.10943.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=696bp|location=Sequence derived from alignment at H-paniculata_contig42775:710..1610+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |