mRNA_H-paniculata_contig42763.10941.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig42763.10941.1 vs. uniprot
Match: D8LKU2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKU2_ECTSI) HSP 1 Score: 215 bits (548), Expect = 9.410e-63 Identity = 105/141 (74.47%), Postives = 114/141 (80.85%), Query Frame = 1
Query: 1 ELLSIFFGQWENGMVPTVRYAPGYGEDYLGGSFLPGPGRWGD-------VPAVSASGWNTSALAAIPLHAEAALKIFDLSLRGAAARLWLQELFPPLFRYHDYLHSSRKDPGTGLVYVYHPWETEISADSAMWPDLLRETR 402
ELLSIF GQWENG+VPTVRYAPGY D+LGGSFLPGPG WG A SA G NTS+LAAIPLHAEAAL+IFDLS R A ARLWLQ+LFP LFRYHDYLH SR DP TGLVYV+HPWETE+SADSA+WP LL + R
Sbjct: 110 ELLSIFRGQWENGLVPTVRYAPGYEADFLGGSFLPGPGGWGGRSSDKNASSAQSAGGANTSSLAAIPLHAEAALRIFDLSPRDAEARLWLQDLFPALFRYHDYLHGSRNDPETGLVYVHHPWETEVSADSALWPSLLADAR 250
BLAST of mRNA_H-paniculata_contig42763.10941.1 vs. uniprot
Match: A0A4D9DAW9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAW9_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.040e-25 Identity = 56/136 (41.18%), Postives = 85/136 (62.50%), Query Frame = 1
Query: 1 ELLSIFFGQWE-NGMVPTVRYAPGY-GEDYLGGSFLPGPGRWGDVPAVSASGWNTSALAAIPLHAEAALKIFDLSLRGAAARLWLQELFPPLFRYHDYLHSSRKDPGTGLVYVYHPWETEISADSAMWPDLLRETR 402
EL++ GQW G+VP +R+ P G +L G++ PGP +W SA+ +T+ LAA+P HA A+++F++ R A +L ++FPP+F+YH YLH+SR D LV+ YHPWE+E+ DS +W L T+
Sbjct: 85 ELIACLSGQWPFTGLVPRIRFPPSSEGSAWLEGTYYPGPAQWQTPRDGSAAALSTAGLAALPWHAIVAMQLFNVR-RDDAGLSFLAQVFPPIFKYHQYLHTSR-DAKNHLVFSYHPWESELPGDSPVWSAALAATK 218
BLAST of mRNA_H-paniculata_contig42763.10941.1 vs. uniprot
Match: K8YV71_NANGC (Glycoside hydrolase family 37 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YV71_NANGC) HSP 1 Score: 97.8 bits (242), Expect = 3.860e-22 Identity = 52/136 (38.24%), Postives = 79/136 (58.09%), Query Frame = 1
Query: 1 ELLSIFFGQWEN-GMVPTVRYAPGY-GEDYLGGSFLPGPGRWGDVPAVSASGWNTSALAAIPLHAEAALKIFDLSLRGAAARLWLQELFPPLFRYHDYLHSSRKDPGTGLVYVYHPWETEISADSAMWPDLLRETR 402
EL++ GQW + G+VP +R+ P G +L G++ PGP +W SA+ +T+ LAA P HA A+++F++ FPP+F+YH YLH+SR D LV+ +HPWE+E+ DS +W L T+
Sbjct: 74 ELIACLSGQWPSTGLVPRIRFPPSSEGSAWLEGTYYPGPAQWQTPRDGSAAALSTAGLAAPPWHAIVAMQLFNV--------------FPPIFKYHQYLHTSR-DAKNHLVFSHHPWESELPGDSPVWSAALAATK 194
BLAST of mRNA_H-paniculata_contig42763.10941.1 vs. uniprot
Match: A0A835Z1J8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1J8_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.550e-19 Identity = 48/108 (44.44%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 1 ELLSIFFGQWENGMVPTVRY------APGYGE-DYLGGSFLPGPGRWGDVPAVSASGWNTSALAAIPLHAEAALKIFDLSLRGAAARLWLQELFPPLFRYHDYLHSSR 303
E++++ QW++G +P+ R+ + G G D++ G+ LPGP W V +G NT+ALAA+PLHA AL+++ LS RGA ARLWLQ++FP L+R+H +LH+ R
Sbjct: 21 EVVAVLNSQWDSGFIPSARFPAESANSSGSGNNDWVEGTALPGPRFWRGC--VGRNGDNTTALAALPLHAHVALQVYALSDRGADARLWLQQIFPALYRWHAHLHAVR 126
BLAST of mRNA_H-paniculata_contig42763.10941.1 vs. uniprot
Match: A0A7C1KUD8_9EURY (Glycoside hydrolase n=2 Tax=Archaea TaxID=2157 RepID=A0A7C1KUD8_9EURY) HSP 1 Score: 85.9 bits (211), Expect = 5.160e-17 Identity = 47/127 (37.01%), Postives = 69/127 (54.33%), Query Frame = 1
Query: 1 ELLSIFFGQWENGMVPTVRYAPGYGEDYLGGSFLPGPGRWGDVPAVSA-SGWNTSALAAIPLHAEAALKIFDLSLRGAAARLWLQELFPPLFRYHDYLHSSRKDPGTGLVYVYHPWETEISADSAMW 378
ELLS+F GQW+NGM+P + Y+P + Y P W + A SG TS + P+HA AAL I++ + +A +L+E+FP L H + H+ R G GL Y+ HPW + + +S W
Sbjct: 54 ELLSLFRGQWKNGMIPHIVYSPNPSDAYF-----PDAEFWNTTSSKQAPSGLQTSGITHPPVHATAALTIYNRAKNRRSALEFLKEIFPNLLASHRFFHTIRDPLGEGLAYIRHPWASGLD-NSPTW 174
BLAST of mRNA_H-paniculata_contig42763.10941.1 vs. uniprot
Match: UPI001FB22EDC (glycoside hydrolase n=1 Tax=Rhodothermus marinus TaxID=29549 RepID=UPI001FB22EDC) HSP 1 Score: 85.1 bits (209), Expect = 6.410e-17 Identity = 50/131 (38.17%), Postives = 71/131 (54.20%), Query Frame = 1
Query: 1 ELLSIFFGQWENGMVPTVRYAPGYGEDYLGGSFLPGPGRWG-----DVPAVSASGWNTSALAAIPLHAEAALKIFDLSLRGAAARLWLQELFPPLFRYHDYLHSSRKDPGTGLVYVYHPWETEISADSAMW 378
EL +F QW++G+VP + + D + PGPG W D PA A TS + P+HA AA I+ + +AAR +L+ELFP L +HDYL R G GLVY+ HPWE+ + ++ +W
Sbjct: 44 ELRHLFRAQWKHGLVPHIVF------DRRARGYFPGPGVWETHRSPDAPARIA----TSGIVQPPVHATAAWAIYQQARDRSAARAFLEELFPKLAAWHDYLFRERDYYGEGLVYIRHPWESGMD-NAPLW 163
BLAST of mRNA_H-paniculata_contig42763.10941.1 vs. uniprot
Match: A0A1M6UK95_9BACT (Trehalase n=1 Tax=Rhodothermus profundi TaxID=633813 RepID=A0A1M6UK95_9BACT) HSP 1 Score: 84.7 bits (208), Expect = 1.400e-16 Identity = 50/131 (38.17%), Postives = 68/131 (51.91%), Query Frame = 1
Query: 1 ELLSIFFGQWENGMVPTVRYAPGYGEDYLGGSFLPGPGRWGD-----VPAVSASGWNTSALAAIPLHAEAALKIFDLSLRGAAARLWLQELFPPLFRYHDYLHSSRKDPGTGLVYVYHPWETEISADSAMW 378
EL +F QW NG+VP + + D + PGP W PA A TS + PLHA AA I+ + +AAR +L+ELFP L +HDYL R G GLVY+ HPWE+ + ++ +W
Sbjct: 57 ELRHLFRAQWRNGLVPHIVF------DRRARGYFPGPQVWETHRCPHAPARKA----TSGVVQPPLHATAAWAIYQQATDRSAARAFLEELFPKLVAWHDYLFRERDPQGEGLVYIRHPWESGMD-NAPLW 176
BLAST of mRNA_H-paniculata_contig42763.10941.1 vs. uniprot
Match: UPI00190A772E (DUF547 domain-containing protein n=1 Tax=Persephonella atlantica TaxID=2699429 RepID=UPI00190A772E) HSP 1 Score: 84.7 bits (208), Expect = 1.690e-16 Identity = 47/131 (35.88%), Postives = 73/131 (55.73%), Query Frame = 1
Query: 1 ELLSIFFGQWENGMVPTVRYAPGYGEDYLGGSFLPGPGRWG-DVPAVSASGWNTSALAAIPLHAEAALKIFDLSLRGAAARLWLQELFPPLFRYHDYLHSSRKDPGTGLVYVYHPWETEISADSAMWPDLL 390
E++S+F QWENGM+P + + P D LG + P P W D+ S TS + P+HA AALKI++ + A+ +L+ ++P L + H Y + R GL+Y+ HPWE+ + +S MW +L
Sbjct: 56 EMVSLFEAQWENGMLPHIVFNP----DNLG-RYFPEPDFWQTDITPFSNKKHLTSGITQPPVHAYAALKIYENAKDKEKAKQFLRWIYPKLIKLHRYFYLERNPDDNGLIYIRHPWESGMD-NSPMWDPVL 180
BLAST of mRNA_H-paniculata_contig42763.10941.1 vs. uniprot
Match: A0A6G8Q9S9_9ACTN (Beta-fructofuranosidase n=2 Tax=Rubrobacter tropicus TaxID=2653851 RepID=A0A6G8Q9S9_9ACTN) HSP 1 Score: 84.0 bits (206), Expect = 2.580e-16 Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 1
Query: 1 ELLSIFFGQWENGMVPTVRYAPGYGEDYLGGSFLPGPGRW---GDVPAVSASGWNTSALAAIPLHAEAALKIFDLSLRGA--AARLWLQELFPPLFRYHDYLHSSRKDPGTGLVYVYHPWETEISADSAMWPDLLR 393
ELL +F QW+NG VP + + P + S+ PGP W G P + TSAL P A A++I+ + RG AA +L+E++P L R+H YL ++R G+GLV +YHPWE+ +S W LR
Sbjct: 59 ELLGLFEHQWKNGKVPHIVFNPHAPAE----SYFPGPEHWVSAGLFPDAPPAPPYTSALCQPPTQALGAIRIWKTAPRGDRDAAHSFLREIYPKLLRWHRYLATARDPEGSGLVTIYHPWESGTD-NSPRWDAPLR 189
BLAST of mRNA_H-paniculata_contig42763.10941.1 vs. uniprot
Match: A0A6J4PCC8_9ACTN (GH63 n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4PCC8_9ACTN) HSP 1 Score: 84.0 bits (206), Expect = 2.590e-16 Identity = 50/134 (37.31%), Postives = 71/134 (52.99%), Query Frame = 1
Query: 1 ELLSIFFGQWENGMVPTVRYAPGYGEDYLGGSFLPGPGRWGDVPAVSASGWNTSALAAIPLHAEAALKIFDLS-LRG---AAARLWLQELFPPLFRYHDYLHSSRKDPGTGLVYVYHPWETEISADSAMWPDLL 390
E+ S+ QWENG +P + + P + S+ PGP W A TS L P+HA AAL+I ++ RG A AR +L E++P L +H YL ++R G+GLV +YHPWE+ +S W L
Sbjct: 56 EIRSLLDHQWENGKIPHIIFNPEAPPE----SYFPGPEHWASAAAAPDIPAMTSGLCQPPVHAFAALRILQIAEARGEGAAGAREFLAEVYPKLLAWHRYLATARDPEGSGLVTIYHPWESGTD-NSPRWTGAL 184 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42763.10941.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig42763.10941.1 >prot_H-paniculata_contig42763.10941.1 ID=prot_H-paniculata_contig42763.10941.1|Name=mRNA_H-paniculata_contig42763.10941.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp ELLSIFFGQWENGMVPTVRYAPGYGEDYLGGSFLPGPGRWGDVPAVSASGback to top mRNA from alignment at H-paniculata_contig42763:152..1240+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig42763.10941.1 ID=mRNA_H-paniculata_contig42763.10941.1|Name=mRNA_H-paniculata_contig42763.10941.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1089bp|location=Sequence derived from alignment at H-paniculata_contig42763:152..1240+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig42763:152..1240+ >mRNA_H-paniculata_contig42763.10941.1 ID=mRNA_H-paniculata_contig42763.10941.1|Name=mRNA_H-paniculata_contig42763.10941.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=804bp|location=Sequence derived from alignment at H-paniculata_contig42763:152..1240+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |