mRNA_H-paniculata_contig4270.10921.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4270.10921.1
Unique NamemRNA_H-paniculata_contig4270.10921.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: D7FLI7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI7_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 6.040e-38
Identity = 86/181 (47.51%), Postives = 108/181 (59.67%), Query Frame = 1
Query:    1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKVNSDC-----TPPYEETIVTEKGTK--------------MTVEVPIMETEFTSGMWDT-DDLLQAVLAY---PDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
            +VDDLFL+T EF YDG+ NE     R +G D   ++ VQ ALN QY G  I TE++FNGAGI E V+         P YEET+VT KGTK              +   VP+M+ +   G W+  DDLL  VL+Y   P   YHG H+L HLSRD+L+ESDC  ED  N QIA++TGM+D D
Sbjct:  328 VVDDLFLSTPEFEYDGEMNEAALSQRCTGEDLTNLLRVQEALNTQYSGSDIITEFAFNGAGIAEHVSQSVDGITYVPNYEETMVTIKGTKWYEDGQVNVHDTNWLATNVPLMQQDMADGTWEANDDLLAGVLSYLYKPSSFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSD 508          
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: A0A6H5JPQ4_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ4_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.040e-36
Identity = 83/181 (45.86%), Postives = 108/181 (59.67%), Query Frame = 1
Query:    1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKVNSDC-----TPPYEETIVTEKGTK--------------MTVEVPIMETEFTSGMWDT-DDLLQAVLAYPDEV---YHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
            +VDDLFL+T EF Y+G+ NE     R +G D   ++ VQ ALN QY G  I TE++FNG GI E V+         P YEET+VT KGTK              +   VP+M+ +   G W+  D+LL AV++Y D     YHG H+L HLSRD+L+ESDC  ED  N QIA++TGM+D D
Sbjct:  528 VVDDLFLSTPEFEYNGEMNEAAVAQRCTGEDLSNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQSVDGITYVPEYEETMVTTKGTKWYEDGQINVHDTNWLATNVPLMQQDMADGTWEANDELLAAVISYLDTASTFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSD 708          
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: A0A6H5JQ44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ44_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 6.970e-36
Identity = 82/181 (45.30%), Postives = 107/181 (59.12%), Query Frame = 1
Query:    1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKVNSDC-----TPPYEETIVTEKGTK--------------MTVEVPIMETEFTSGMWDT-DDLLQAVLAY---PDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
            +VDDLFL+T EF YDG +NE     R +G D   ++ VQ +LN QY G  I TE++FNG GI E V+         P YEET+VT KGTK              +   VP+M+ +   G W+  DDLL  V+++   P   YHG H+L HLSRD+L+ESDC  ED  N QIA++TGM+D D
Sbjct:  393 VVDDLFLSTPEFEYDGGTNEAAVAQRCTGQDLSNLLGVQQSLNTQYSGSEIITEFAFNGGGIAEHVSQSVEDISYVPNYEETMVTLKGTKWFEDGQINVHDTNWLATNVPLMQQDMADGTWEANDDLLAEVISHLDTPSTFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSD 573          
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: D7FLJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ1_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 2.670e-34
Identity = 81/181 (44.75%), Postives = 106/181 (58.56%), Query Frame = 1
Query:    1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKV-----NSDCTPPYEETIVTEKGTK--------------MTVEVPIMETEFTSGMWDT-DDLLQAVLAYPDE---VYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
            +VDDLFL+T EF YDG  NE     R +G D   ++ VQ +LN  Y G  I TE++FNG GI E V     N    P YEET+VT KGT+              +   VP+M+ +   G W+  D+LL AV++Y D     YHG H+L HLSRD+L+E+DC  ED  N QIA++TGM+D D
Sbjct:  348 VVDDLFLSTPEFEYDGVLNEAALSQRCTGEDLTNLLSVQQSLNALYAGSDIITEFAFNGGGIAEHVSQAVENITYVPDYEETMVTTKGTQWYEDGQINVHDTNWLATNVPLMQQDMADGTWEANDELLVAVISYLDTSSTFYHGHHTLIHLSRDQLRETDCVTEDSGNVQIALMTGMWDSD 528          
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: A0A6H5K3S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S3_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 3.560e-34
Identity = 79/172 (45.93%), Postives = 98/172 (56.98%), Query Frame = 1
Query:    1 MVDDLFLTTTEFLYDGQSNEGTGYRASGADFEGIIDVQNALNDQYGCSIKTEYSFNGAGILEKVNSDCTPPYEETIVT--EKGTK--------------MTVEVPIMETEFTSGMWDTDDLLQAVLAYPDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
            MVDDLFL T  F YDG +NEG   R + +D       +++LN QYG SI TE+ FNG GIL  VNS          +    KG +              +   VP M  EF +G W TD LL  VLA  D  +  SH+L+HL+RD+L ESDC+IEDG NAQIAV+TGMF+ D
Sbjct:  276 MVDDLFLATGVFEYDGDTNEGAEVRLTSSDMSAFASFESSLNSQYGSSIVTEWPFNGLGILNVVNSAFVLDIANADIALLPKGQQVNGDGIDPQLPVGWLATAVPGMTAEFAAGSWSTDGLLGWVLANLDTFWWQSHTLSHLARDDLGESDCSIEDGGNAQIAVLTGMFNSD 447          
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: A0A6H5JW45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW45_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 5.030e-32
Identity = 81/203 (39.90%), Postives = 106/203 (52.22%), Query Frame = 1
Query:    1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKV-----NSDCTPPYEETIVTEKGTK------------------------------------MTVEVPIMETEFTSGMWDT-DDLLQAVLAY---PDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
            +VDDLFL+T EF YDG  NE     R +G D   ++ VQ ALN QY G  I TE++FNG GI E V     N    P YEET+VT KGT+                                    +   VP+M+ +   G W+  D+LL AV++Y       +HG H+L HLSRD+L+E+DC  ED  N QIA++TGM+D D
Sbjct:   64 VVDDLFLSTPEFEYDGVLNEAALSQRCTGEDLSNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQAVENITYVPEYEETMVTTKGTRWYEDGELIDFVLFLEGRSLDPSKTSTGQINVHDTNWLATNVPLMQQDMADGTWEANDELLAAVISYLGTSSTFFHGHHTLIHLSRDQLRETDCVTEDTGNVQIALMTGMWDSD 266          
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: D7FLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI8_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.180e-30
Identity = 75/173 (43.35%), Postives = 99/173 (57.23%), Query Frame = 1
Query:    1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKVNSDC-----TPPYEETIVTEKGTK--------------MTVEVPIMETEFTSGMWDT-DDLLQAVLAY---PDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAV 444
            +VDDLFL+T EF YDG  NE     R +G D   ++ VQ ALN QY G  I TE++FNG GI E V+         P YEET+VT KGTK              +   VP+M+ +   G W+  D+LL AV++Y   P  +YHG H+L HLSRD+L+E+DC  +D A   + V
Sbjct:  631 VVDDLFLSTPEFEYDGDMNEAAVAQRCTGEDLTNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQAVDGITYVPDYEETMVTIKGTKWYEDGQINVHDTNWLATNVPLMQQDMADGTWEANDELLVAVISYLDTPSTIYHGHHTLIHLSRDQLRETDCVADDTAAQNLMV 803          
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: D7G022_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G022_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 2.420e-26
Identity = 67/180 (37.22%), Postives = 99/180 (55.00%), Query Frame = 1
Query:    1 MVDDLFLTTTEFLYDGQSNEGTGYRASGADFEGIIDVQNALNDQYGCSIKTEYSFNGAGILEKVNSDCT----------------PPYEETIVTEKGTKMTVEVPI--------METEFTSGMWDTDDLLQAVLAYPDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
            +VDDLFL+T  ++YD  S  G   R SGAD +   + + A N +YG S+KTE++FNG G+L+KV S                   PP   T + +      + +          M+ ++ +G++ +DDLL  V A  D  +  SH+LTHLSRD L ++DC+IEDG N ++ V+ GMFD D
Sbjct:  836 VVDDLFLSTGVWIYDPPSFFGPEERLSGADLQKFQNSEAAFNTEYGASVKTEHAFNGLGVLDKVGSTRRSWVGAAADMGLLPKGDPPNPSTGIPQISDPNWLSIQFNPAAGEQGMQDDYDAGLFSSDDLLARVQADLDAFFWQSHTLTHLSRDNLGKNDCDIEDGGNVRLGVMFGMFDND 1015          
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: A0A6H5K730_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K730_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 8.210e-24
Identity = 74/182 (40.66%), Postives = 95/182 (52.20%), Query Frame = 1
Query:    1 MVDDLFLTTTEFLYDGQSNEGTGY-RASGADFEGIIDVQNALNDQYGCSIKTEYSFNGAGILEKVNSDCTPPYEET--IVTEKG---------------TKM------TVEVPIMETEFTSGMW-DTDDLLQAVLAYPDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMDT 471
            MVDD FL T  F+Y+G SN      R SG +    +    ALN+ Y   I TE+ FN  GILEK  +  T  +E+    +  KG               TK       TV +  +  EF S  W + DDLLQA L   D+ +  SH+L+H +RD L + DC  EDG NAQIAVITG+FD+DT
Sbjct:  283 MVDDHFLGTNTFVYNGGSNASDEEERISGEELRDFLSATKALNELYNAEIITEFPFNALGILEKAETKYTFTFEDADAALLAKGEPPVDNGDGTVGLAPTKTPEDWFNTVTMEGLTAEFDS--WKEKDDLLQASLDMKDDFFWHSHTLSHQARDNLGQVDCESEDGGNAQIAVITGLFDVDT 462          
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: D7FLJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ3_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 3.970e-23
Identity = 69/177 (38.98%), Postives = 89/177 (50.28%), Query Frame = 1
Query:    1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKVNSDC-----TPPYEETIVTEKGTK--------------MTVEVPIMETEFTSGMWDTDDLLQAVLAYPDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
            +VDDLFL+T EF YDG  NE     R +G D   ++ VQ ALN QY G  I TE++FNG GI E V+         P YEET+VT KGTK              +   VP+M+ +   G W+ +D L                       EL+E+DC  ED  N QIA++TGM+D D
Sbjct:  526 VVDDLFLSTPEFEYDGGMNEAAVSQRCTGDDLSQLLSVQQALNTQYSGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGQINVHDTNWLATNVPLMQQDMADGTWEANDDLLV---------------------ELRETDCVTEDTGNVQIALMTGMWDSD 681          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FLI7_ECTSI6.040e-3847.51WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPQ4_9PHAE1.040e-3645.86WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQ44_9PHAE6.970e-3645.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLJ1_ECTSI2.670e-3444.75Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5K3S3_9PHAE3.560e-3445.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW45_9PHAE5.030e-3239.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLI8_ECTSI1.180e-3043.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G022_ECTSI2.420e-2637.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K730_9PHAE8.210e-2440.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FLJ3_ECTSI3.970e-2338.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4270contigH-paniculata_contig4270:5588..8645 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score150.2
Seed ortholog evalue8e-34
Seed eggNOG ortholog2880.D7FLI7
Hectar predicted targeting categoryother localisation
EggNOG OGs28IRF@1,2QR2R@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size471
Cds size471
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4270.10921.1prot_H-paniculata_contig4270.10921.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4270 5588..8645 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930298.3720934-CDS-H-paniculata_contig4270:5587..56531622930298.3720934-CDS-H-paniculata_contig4270:5587..5653Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4270 5588..5653 +
1691481230.9292645-CDS-H-paniculata_contig4270:5587..56531691481230.9292645-CDS-H-paniculata_contig4270:5587..5653Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4270 5588..5653 +
1622930298.3976095-CDS-H-paniculata_contig4270:6091..62141622930298.3976095-CDS-H-paniculata_contig4270:6091..6214Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4270 6092..6214 +
1691481230.939603-CDS-H-paniculata_contig4270:6091..62141691481230.939603-CDS-H-paniculata_contig4270:6091..6214Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4270 6092..6214 +
1622930298.4125817-CDS-H-paniculata_contig4270:7226..72911622930298.4125817-CDS-H-paniculata_contig4270:7226..7291Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4270 7227..7291 +
1691481230.9494681-CDS-H-paniculata_contig4270:7226..72911691481230.9494681-CDS-H-paniculata_contig4270:7226..7291Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4270 7227..7291 +
1622930298.4261525-CDS-H-paniculata_contig4270:8039..82091622930298.4261525-CDS-H-paniculata_contig4270:8039..8209Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4270 8040..8209 +
1691481230.9582937-CDS-H-paniculata_contig4270:8039..82091691481230.9582937-CDS-H-paniculata_contig4270:8039..8209Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4270 8040..8209 +
1622930298.4429452-CDS-H-paniculata_contig4270:8598..86451622930298.4429452-CDS-H-paniculata_contig4270:8598..8645Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4270 8599..8645 +
1691481230.9679968-CDS-H-paniculata_contig4270:8598..86451691481230.9679968-CDS-H-paniculata_contig4270:8598..8645Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4270 8599..8645 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4270.10921.1

>prot_H-paniculata_contig4270.10921.1 ID=prot_H-paniculata_contig4270.10921.1|Name=mRNA_H-paniculata_contig4270.10921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
MVDDLFLTTTEFLYDGQSNEGTGYRASGADFEGIIDVQNALNDQYGCSIK
TEYSFNGAGILEKVNSDCTPPYEETIVTEKGTKMTVEVPIMETEFTSGMW
DTDDLLQAVLAYPDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVIT
GMFDMDT
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mRNA from alignment at H-paniculata_contig4270:5588..8645+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4270.10921.1 ID=mRNA_H-paniculata_contig4270.10921.1|Name=mRNA_H-paniculata_contig4270.10921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3058bp|location=Sequence derived from alignment at H-paniculata_contig4270:5588..8645+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCGATGATCTGTTCCTCACAACGACGGAATTCCTGTACGATGGCCA ATCCAATGAGGGCACGGTAAGCACATACGGCCTGTACATGGGAAATAGAC GAAGTGATGTCATGCTTCAAAATGAGTTGTGTTCGCACGAGTTGGAGTTT CTCAACTCTCGTCTCTGTAGTCGGATGGGGCACAGTGTGGGCTTATCTAT ATACTCAAGGCCGAATCCCAACAGTGTAGGTATAATACACATGGATGTAT ATGTAAATGAGAGAAATTCGGGTAATCCGAATGGAGCCGTTATTCGCTCG ATTAGAGTACTGTAGTGCTTACCCGCCACTATCTCTTTTCCAAGACAGTT TGCGTTAACAATCTGGAGGAGAATGGTCATTTCTCAGAATTGAGAGACAC TCGCAGCATATTCTGTCTACAGCAACGAGTGTCATCCTCCAAAGGCATAT TCCTTGCGCCCCACTCGCTTTACGCAATGCACCCCCCTCTCTATTTGACA TCAGGGATACCGGGCCTCCGGCGCCGACTTCGAAGGGATCATAGATGTAC AAAACGCACTGAACGACCAGTACGGCTGCAGCATCAAGACGGAATATAGT TTCAACGGGGCTGGTATCCTGGAAAAGGTGTGTGCAATGGATACGTAAAG TGTTGCCAGCAGATTTTCGCAGATGCAATTTGTTGTTGATGAGAGACAGA ATATACCGGGTTATTATGCATCATACCGATAAAAAATTGAAGCTAAATAA CACGAAGTTGTTATCGCGCAAGGTAGAGTACCCGTGAAATCTCCGATAAT GGCGAAAATGACTCACTTATTCTCCGCTCTACAAGATGAGAGCGACACAT CAATTTTGGGGGCGCGGGTTTCGGTTTGATGTAACCATCTGTTGCTACAT CACGGGTTAGTCCATCGAACGGAACCTGTTGTCCGAAGTAGCTGGGAATA GAATGCCTCAATTCTCGCCCTCTTTTATAGCGTGGTGGGGGCAGTAGTCC CACTCGCTCGTGATCGCTGGAGTTCGTGGTGGAATACTCTGCCAGACTTT TTCTCCCTTCCGTAGGGATTTTTCATTGCCACGTAGCAGCTTTTTCTCGA AAACGTTTAACAAAAAGAAAAATGAGTAACACGGATTGAATGCACAACCT GCCAATCGAATGGCTTGTAGTAACAACCCTTTCGACCATGGGGCGTATGG TAAAAAACCAGGTCCTCTAACAAAGATAATACACATGGGTTTCCCTCTGA TTCATGGAGAATTCGCGAGTGAGCTTCAAAGTCCAGTTTAAGACGTTTTG TTGTTGGGTGTAGCGATGCAACCAGAGTCCTCATGTGGTTCAAGTGTCGG CTACATAACTGAGTTGGTGAGTTTAGAACAACATCTTTATTTAAGGTATC TTTTGCCCATTCAGGTGCACCAGTTAAGAACCAACGAGCCCTCCTTCAGC GCTGACACACTAGCACGCGACGCGGCTGTTGGTGTACCTTCCGGTACCCC TTTAGAGTTAGGGTCACAGCCACGTTAGGATTACGATTAGGATAGGACCA GGGTTTGGAACTTTCACGTGCGCGCCCTCGTAGGAAATGCACTCATTACT AATTACTCTCCATACGCGTGTTTTTGCTACTATTAATAGGTTAACTCGGA CTGCACGCCCCCGTACGAGGAGACGATCGTCACCGAAAAGGGGACAAAGA TGACGCCTCCTGGTAAGTGTCTCATATTCCACTGATGTAAACCCCCCGTG CCCACCCCGGCTTACGTTGCAATTTTCCCGCCAGTCGTTTGATGAGCATC TATTATTGCACCCAAGCAGTTGTCCACAGATAAACGCTGGCAGTGAATAT TGGGTCAATATACATGATGCGTGAATGCGTGTACAGCCTGTACGTCCTGT TCTCAAGAAGATACGTTAAACATGTGCCTCAAGCGGCGCATCTTCAATTT TCATTGTTAGTGTACAAATCTGTCCAGCATGCCCCCCCCCCGCCTCCACT AATATCCTCAAGACTACAGGCCTTGTACTCCTCTTGTTATCGTGGAGCGT ATATCGCAACACGGAGAATATTTTCACGCCCCCACCCCCCCCCCTCTATC TGTACCCCTTCATTAGTTTTTTTGGGAACAATATTGATTAATATGTCCAG TCCAGTCCAATCCTGTTGTCCACATAGCTGATCATATCTCCGAGGGGGTT GCTAGAACTTTCTGTTCCAATACTGAATTTTTGGCGTTGACCCCATGCAT CGAATCGCCCGGCAATTTGTGTTCTTGAACTGTGTGCCCAGCCTTGATCG TTTCAGAATAACTGCGTCTCATGAATTCCCCCCATCAAAATATGCCGATC TGCAGTCGCCCCCTCCCAACCACCGCTGCTGCACCTGGCTGCCCTCCTAT CTTTACACATCCCAGGCTTGCAGCCCATAGTAATCCAAGAGGACTACCTG AGTGTTGAGGTGCCCATCATGGAGACCGAGTTTACCTCCGGCATGTGGGA CACGGACGACCTGCTGCAAGCTGTGCTAGCCTACCCGGACGAGGTCTACC ACGGCAGCCACTCCCTCACGCATCTGTCCCGTGATGAGCTTCAAGAGTCC GACTGCAATATTGAGGACGGAGGTAGGCTGTACATGGCGGGTGTGGTTAT CGTTGTTATTGTCGTTGTTGTGGATGCGTGGACTTCATATCCACACAAAT ACGCATGGGCACAATATTCGAGAAGGTCCTCTCAAATACCACTTTAAATC GTCTTGACTGCCTGACGGCGGTCGTTGCATCGATGATTCGGGACAACACA TTGGGTGGAGGAATCTAGCGGGGGCAACGGCCGTGTTATCCCGTCAAATG AAGCGATTATATCAGGCACCGCTAGCAAATACAGCTTGAGAAGAATGCGA AAACCAAGTGGTCTGGGGTGCGCTGTACCGCTAGTTTGACCTTGAATGTT GACCCTCTCCTCACTTCTGTTTCCCTCTTCGTGTTGCTACCTCGCCATCT CCCACACACAGCCAACGCGCAGATCGCCGTGATCACCGGCATGTTCGACA TGGATACG
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Coding sequence (CDS) from alignment at H-paniculata_contig4270:5588..8645+

>mRNA_H-paniculata_contig4270.10921.1 ID=mRNA_H-paniculata_contig4270.10921.1|Name=mRNA_H-paniculata_contig4270.10921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at H-paniculata_contig4270:5588..8645+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCGATGATCTGTTCCTCACAACGACGGAATTCCTGTACGATGGCCA
ATCCAATGAGGGCACGATGGTCGATGATCTGTTCCTCACAACGACGGAAT
TCCTGTACGATGGCCAATCCAATGAGGGCACGGGATACCGGGCCTCCGGC
GCCGACTTCGAAGGGATCATAGATGTACAAAACGCACTGAACGACCAGTA
CGGCTGCAGCATCAAGACGGAATATAGTTTCAACGGGGCTGGTATCCTGG
AAAAGGGATACCGGGCCTCCGGCGCCGACTTCGAAGGGATCATAGATGTA
CAAAACGCACTGAACGACCAGTACGGCTGCAGCATCAAGACGGAATATAG
TTTCAACGGGGCTGGTATCCTGGAAAAGGTTAACTCGGACTGCACGCCCC
CGTACGAGGAGACGATCGTCACCGAAAAGGGGACAAAGATGACGTTAACT
CGGACTGCACGCCCCCGTACGAGGAGACGATCGTCACCGAAAAGGGGACA
AAGATGACTGTTGAGGTGCCCATCATGGAGACCGAGTTTACCTCCGGCAT
GTGGGACACGGACGACCTGCTGCAAGCTGTGCTAGCCTACCCGGACGAGG
TCTACCACGGCAGCCACTCCCTCACGCATCTGTCCCGTGATGAGCTTCAA
GAGTCCGACTGCAATATTGAGGACGGAGTGTTGAGGTGCCCATCATGGAG
ACCGAGTTTACCTCCGGCATGTGGGACACGGACGACCTGCTGCAAGCTGT
GCTAGCCTACCCGGACGAGGTCTACCACGGCAGCCACTCCCTCACGCATC
TGTCCCGTGATGAGCTTCAAGAGTCCGACTGCAATATTGAGGACGGAGCC
AACGCGCAGATCGCCGTGATCACCGGCATGTTCGACATGGATACGCCAAC
GCGCAGATCGCCGTGATCACCGGCATGTTCGACATGGATACG
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