mRNA_H-paniculata_contig42698.10917.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig42698.10917.1 vs. uniprot
Match: A0A8H6YZQ1_9AGAR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6YZQ1_9AGAR) HSP 1 Score: 71.2 bits (173), Expect = 9.350e-13 Identity = 29/69 (42.03%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 1 KYKCRLVAHGNRQIKGIHYQEASSPAPAAASTKMVLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIP 207
+YK RLVA+G Q+ G+HY + +P A+ +++L+ AA+ +WE+ D + AYL APID+ +++EIP
Sbjct: 1010 RYKVRLVANGRTQVYGLHYTDTYAPVIRHATLRVLLTFAAVNNWEIHQADVKNAYLNAPIDETVYMEIP 1078
BLAST of mRNA_H-paniculata_contig42698.10917.1 vs. uniprot
Match: A0A8H7CEA5_9AGAR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H7CEA5_9AGAR) HSP 1 Score: 70.1 bits (170), Expect = 2.380e-12 Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 1 KYKCRLVAHGNRQIKGIHYQEASSPAPAAASTKMVLSLAAIQDWELRHVDFEQAYLQAPIDQEIFV 198
KYK RLVA+G QI GIHY E +P A+ +++L+ A++DWE+ D + AYL APID+ +++
Sbjct: 754 KYKVRLVANGRTQIHGIHYTETYAPVVRHATLRVLLTFGAVRDWEIHQADVKNAYLNAPIDETVYM 819
BLAST of mRNA_H-paniculata_contig42698.10917.1 vs. uniprot
Match: A0A6P0VAD0_9CYAN (DDE-type integrase/transposase/recombinase (Fragment) n=1 Tax=Symploca sp. SIO1C2 TaxID=2607769 RepID=A0A6P0VAD0_9CYAN) HSP 1 Score: 67.0 bits (162), Expect = 2.880e-11 Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 1 KYKCRLVAHGNRQIKGIHYQEASSPAPAAASTKMVLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIP 207
KYK RL G+R KG HY +P + AS +M+L+LAA+ +W +D+ AY QAP+++EI++E+P
Sbjct: 950 KYKARLNIDGSRMRKGQHYDLTYAPVASWASVRMLLTLAAVHNWHTTQIDYVLAYPQAPVEREIYMELP 1018
BLAST of mRNA_H-paniculata_contig42698.10917.1 vs. uniprot
Match: A0A8H7TXH5_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7TXH5_9APHY) HSP 1 Score: 66.6 bits (161), Expect = 3.950e-11 Identity = 29/69 (42.03%), Postives = 45/69 (65.22%), Query Frame = 1
Query: 1 KYKCRLVAHGNRQIKGIHYQEASSPAPAAASTKMVLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIP 207
K+K RL A G Q+ GI Y E ++P + +S ++VL+LAA DWE+ +DF+ AYL +D+ I++ P
Sbjct: 778 KFKARLCAQGFSQVYGIDYVETAAPTASLSSLRLVLALAAANDWEIHQIDFKNAYLNGDLDETIYMRQP 846
BLAST of mRNA_H-paniculata_contig42698.10917.1 vs. uniprot
Match: A0A8H7NVE6_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NVE6_9APHY) HSP 1 Score: 66.2 bits (160), Expect = 5.330e-11 Identity = 28/69 (40.58%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 1 KYKCRLVAHGNRQIKGIHYQEASSPAPAAASTKMVLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIP 207
K+K RL A G Q+ G+ Y + ++P AS ++VL+LAA DWE+ +DF+ AYL +D+ I++ P
Sbjct: 282 KFKARLCAQGFSQVHGVDYDQTAAPTARLASLRLVLALAAANDWEVHQIDFKNAYLNGDLDETIYMRQP 350
BLAST of mRNA_H-paniculata_contig42698.10917.1 vs. uniprot
Match: A0A4S4M1W0_9APHY (Uncharacterized protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M1W0_9APHY) HSP 1 Score: 66.2 bits (160), Expect = 5.420e-11 Identity = 27/69 (39.13%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 1 KYKCRLVAHGNRQIKGIHYQEASSPAPAAASTKMVLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIP 207
KYK RLVA G Q+ G+ Y E +P +S +++L++AA +W+++ DF AYL +P+D+++++E P
Sbjct: 1217 KYKARLVARGFTQVHGVDYFETFAPVAKLSSFRLLLAIAARNNWDIKSFDFSSAYLNSPLDEDVYMEQP 1285
BLAST of mRNA_H-paniculata_contig42698.10917.1 vs. uniprot
Match: A0A0W0FDG7_9AGAR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Moniliophthora roreri TaxID=221103 RepID=A0A0W0FDG7_9AGAR) HSP 1 Score: 65.9 bits (159), Expect = 7.190e-11 Identity = 30/69 (43.48%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 1 KYKCRLVAHGNRQIKGIHYQEASSPAPAAASTKMVLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIP 207
+YK RLVA G Q+KGI Y E SP + +++L+LAA++DWE++ +D + A+L +D+EI++E P
Sbjct: 71 RYKARLVAKGFSQVKGIDYDELFSPVVHFETVRVLLALAALEDWEIQVLDVKTAFLYGELDKEIYMEQP 139
BLAST of mRNA_H-paniculata_contig42698.10917.1 vs. uniprot
Match: A0A0V0GGR6_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0GGR6_SOLCH) HSP 1 Score: 61.6 bits (148), Expect = 1.380e-10 Identity = 28/69 (40.58%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 1 KYKCRLVAHGNRQIKGIHYQEASSPAPAAASTKMVLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIP 207
+YK RLVA G Q GI Y E +P + +++LSLAA+ +W L+ D + A+L +D+EI++E+P
Sbjct: 19 RYKARLVAKGYTQTYGIDYLETFAPVAKMNTVRILLSLAAVFNWNLQQFDVKNAFLHGDLDEEIYMEVP 87
BLAST of mRNA_H-paniculata_contig42698.10917.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI) HSP 1 Score: 64.7 bits (156), Expect = 1.860e-10 Identity = 27/69 (39.13%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 1 KYKCRLVAHGNRQIKGIHYQEASSPAPAAASTKMVLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIP 207
+YK RLV G Q+ G+ +QE SP +S + ++S+AA++DW++ H+D + AYL +++EI+V P
Sbjct: 285 RYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPP 353
BLAST of mRNA_H-paniculata_contig42698.10917.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI) HSP 1 Score: 64.7 bits (156), Expect = 1.890e-10 Identity = 27/69 (39.13%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 1 KYKCRLVAHGNRQIKGIHYQEASSPAPAAASTKMVLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIP 207
+YK RLV G Q+ G+ +QE SP +S + ++S+AA++DW++ H+D + AYL +++EI+V P
Sbjct: 890 RYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPP 958 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42698.10917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig42698.10917.1 >prot_H-paniculata_contig42698.10917.1 ID=prot_H-paniculata_contig42698.10917.1|Name=mRNA_H-paniculata_contig42698.10917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp KYKCRLVAHGNRQIKGIHYQEASSPAPAAASTKMVLSLAAIQDWELRHVDback to top mRNA from alignment at H-paniculata_contig42698:1..219- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig42698.10917.1 ID=mRNA_H-paniculata_contig42698.10917.1|Name=mRNA_H-paniculata_contig42698.10917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=219bp|location=Sequence derived from alignment at H-paniculata_contig42698:1..219- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig42698:1..219- >mRNA_H-paniculata_contig42698.10917.1 ID=mRNA_H-paniculata_contig42698.10917.1|Name=mRNA_H-paniculata_contig42698.10917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=438bp|location=Sequence derived from alignment at H-paniculata_contig42698:1..219- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |