mRNA_H-paniculata_contig42675.10912.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig42675.10912.1
Unique NamemRNA_H-paniculata_contig42675.10912.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig42675.10912.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 7.100e-52
Identity = 136/407 (33.42%), Postives = 225/407 (55.28%), Query Frame = 1
Query:   46 MPEELRGDLPVEPKNHREAQASPEWEHWQNAEEVEMQGLIDSGVWT-QVERPKNKLVVSTIIIYKRKIGEDGKVEKHKCRLVAHGDRQIKGIHSQEASSPAPAAASTRMILSLAAIQDWEVRHVDLEQAYLQAPID*KIIVENPV*YREFPEAVGRLDRAIYGMVQAGKCWSMKVIRELTAKGFEQSHADPCVFRKLVDGEMVAVI-IYVNGLLISIKGPKIVDELR-ADLRLDHKLKDLGDAKYYLGCEITCDRKKRKTKIDQHLYARSMAEHFGILKTSMLPVRAGNN--TMIKNDGPKTSEKAEEMRGVLILGDSRGAHLGGDNNATRHPTRRTHYVKFCENAVVEHKRAVGNILQYVLRTADLGITYGGQDCGVEM--LVYADSDYTTCQDSRRSVSSGAVLL 1245
            +P+EL  D+  EP ++ EAQ S   + W+ A   E++GL+ +G +T  V+ P    V+    ++K K  E GK+ K K RLVA G +Q  G+   E  SP   AAS R++++LA   + E+ H D+EQA++Q+ +D ++ ++ P       E V RL++++YG+ QA + +  +++ EL   GFEQS +DPCV R ++  E+V ++ I+V+ +L +  G K + E+  A L      K+LG+ K++LGCE   DRK    +I Q  Y RS+ E F I++TS +P    N+  ++++ +G       E +  ++ +     A +   +NA R   R +H  K        H +A   IL Y+L TA L + +  +D  V++  LVY D+D+ +    RRSVS   V +
Sbjct:  877 LPKELVQDVESEPGSYEEAQRSKYAKIWEGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYA--GTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADI---SNAVRAVARHSHEPK------KSHWKAAQKILNYLLETAHLTLKFK-RDSSVDVGTLVYVDADFASKATDRRSVSGAMVFV 1271          
BLAST of mRNA_H-paniculata_contig42675.10912.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 1.880e-50
Identity = 134/407 (32.92%), Postives = 224/407 (55.04%), Query Frame = 1
Query:   46 MPEELRGDLPVEPKNHREAQASPEWEHWQNAEEVEMQGLIDSGVWT-QVERPKNKLVVSTIIIYKRKIGEDGKVEKHKCRLVAHGDRQIKGIHSQEASSPAPAAASTRMILSLAAIQDWEVRHVDLEQAYLQAPID*KIIVENPV*YREFPEAVGRLDRAIYGMVQAGKCWSMKVIRELTAKGFEQSHADPCVFRKLVDGEMVAVI-IYVNGLLISIKGPKIVDELR-ADLRLDHKLKDLGDAKYYLGCEITCDRKKRKTKIDQHLYARSMAEHFGILKTSMLPVRAGNN--TMIKNDGPKTSEKAEEMRGVLILGDSRGAHLGGDNNATRHPTRRTHYVKFCENAVVEHKRAVGNILQYVLRTADLGITYGGQDCGVEM--LVYADSDYTTCQDSRRSVSSGAVLL 1245
            +P+E+  D+  EP ++ EAQ S   + W+ A   E++GL+ +G +T  V+ P    V+    ++K K  E GK+ K K RLVA G +Q  G+   E  SP   AAS R++++LA   + E+ H D+EQA++Q+ +D ++ ++ P       E V RL++++YG+ QA + +  +++ EL   GFEQS +DPCV   ++  E+V ++ I+V+ +L +  G K + E+  A L      K+LG+ K++LGCE   DRK    +I Q  Y RS+ E F I++TS +P    N+  ++++ +G       E +  ++ +     A +   +NA R   R +H  K        H +A   IL Y+L TA L + +  +D  V++  LVY D+D+ +    RRSVS   V +
Sbjct:  667 LPKEVVQDVESEPGSYEEAQRSKYAKIWEGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLCFMMGDEVVGMVAIHVDDILYA--GTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADI---SNAVRAVARHSHEPK------KSHWKAAQKILNYLLETAHLTLKFK-RDSSVDVGTLVYVDADFASKATDRRSVSGAMVFV 1061          
BLAST of mRNA_H-paniculata_contig42675.10912.1 vs. uniprot
Match: A0A177T2I3_9BASI (Uncharacterized protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177T2I3_9BASI)

HSP 1 Score: 191 bits (484), Expect = 1.680e-49
Identity = 124/402 (30.85%), Postives = 209/402 (51.99%), Query Frame = 1
Query:   52 EELRGDLPVEPKNHREAQASPEWEHWQNAEEVEMQGLIDSGVWTQVERPKNKLVVSTIIIYKRKIGEDGKVEKHKCRLVAHGDRQIKGIHSQEASSPAPAAASTRMILSLAAIQDWEVRHVDLEQAYLQAPID*KIIVENPV*YREFPEAVGRLDRAIYGMVQAGKCWSMKVIRELTAKGFEQSHADPCVFRKLVDGEMVAVIIYVNGLLISIKGPKIVDELRADLRLDHKLKDLGDAKYYLGCEITCDRKKRKTKIDQHLYARSMAEHFGI--LKTSMLPVRAGNNTMIKNDGPKTSEKAEEMRGVLILGDSRGAHLGGDNNATRHPTRRTHYVKFCENAVVEHKRAVGNILQYVLRTADLGITYGGQDCGVEMLVYADSDYTTCQDSRRSVSSGAVLLGG 1251
            EE R D    PK   +A+   +W+ W+ A + E+  L ++G +  VE P+   +++   ++K K   DG V K+K R VA G  Q++G+   E  +P    A+ R I ++AA  D E+   D + AYL  P+  K+ +  P      P  V RL +A+YG+ QAG+ W++ ++  LT  GF+QS  D  +F +  D   VA+I+YV+ L+I+      + EL+  L    K KDLG+A + LG EI  DR+K+   + Q  YAR +   FG+   K + LP+++  + M + +G   ++KA       I+G      +G   +   + +      +F  +   EH  A  ++++ +  TAD  +T+ G D G+ +  Y D+D+   +  R+S S  A+L+ G
Sbjct:  828 EEQRED----PKTVEQARKREDWKKWEEAIQKELGSLEETGTYEWVEAPEGANILTGKWVFKIKRNPDGSVSKYKARFVARGYAQVEGVDYDETHAPTARMATVRAICAIAACDDLELSQFDYDTAYLNGPLHAKVYMHPPEGTESRPGKVWRLIKALYGLKQAGREWNLVLVELLTDLGFKQSKTDASLFVR-TDPSFVAIIVYVDDLIIAAAKGTDMGELKRQLAQRFKGKDLGEAHHLLGIEIRRDREKKILTMSQGRYAREVLARFGMSNCKPAKLPMQSKISLMPRREGEPAADKATYR---AIVGSLMYLVMGTRGDLAFYVSL---LGRFASDPSEEHMAAAKHLMRNIKLTADAKLTFDGSD-GLRITAYVDADWAGDRSDRKSTSGFAILMAG 1217          
BLAST of mRNA_H-paniculata_contig42675.10912.1 vs. uniprot
Match: UPI0020246435 (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020246435)

HSP 1 Score: 184 bits (468), Expect = 2.480e-49
Identity = 125/401 (31.17%), Postives = 206/401 (51.37%), Query Frame = 1
Query:   79 EPKNHREAQASPEWEHWQNAEEVEMQGLIDSGVWTQVERPKNKLVVSTIIIYKRKIGEDGKVEKHKCRLVAHGDRQIKGIHSQEASSPAPAAASTRMILSLAAIQDWEVRHVDLEQAYLQAPID*KIIVENPV*YREFPEA--VGRLDRAIYGMVQAGKCWSMKVIRELTAKGFEQSHADPCVFRKLVDGEMVAVIIYVNGLLISIKGPKIVDELRADLRLDHKLKDLGDAKYYLGCEITCDRKKRKTKIDQHLYARSMAEHFGI--LKTSMLPVRAGNNTMIKNDGPKTSEKAEEMRGV---LILGDSRGAHLGGDNNATRHPTRRTHYVKFCENAVVEHKRAVGNILQYVLRTADLGITYGGQDCGVEMLV--YADSDYTTCQDSRRSVSSGAVLLGGG 1254
            EP N+ EA  SP+   W  A + EM  + ++ VWT V+ P ++  +    I+K+K   DG V  +K RLVA G RQ++GI   E  SP     S R++L++AA  D+E+  +D++ A+L   ++ ++ +  P  + +   A  V +L R+IYG+VQA + W+ +    + A GF Q+  + C+++K+    +  +I+YV+ +L+     + +D ++  L     +KDLG+A Y LG +I  DR +R   + Q  Y   + + F +   K   LPV  G   + K   P T+E  E+M+ V     +G    A L    +     +    Y     N  V+H  AV NIL+Y+ RT D+ + YGG     E++V  Y D+ + T  D  +S +     L GG
Sbjct:    7 EPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNKRFDSVIKAYGFIQTFGEACIYKKVSGSSVAFLILYVDDILLIGNDIEFLDSIKGYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKVLKKFKMDQAKKGFLPVLQGVK-LSKTQCPTTAEDREKMKDVPYASAIGSIMYAMLCTRPDVCLAISLAGRYQS---NPGVDHWTAVKNILKYLKRTKDMFLVYGGDK---ELIVNGYVDASFDTDPDDSKSQTGYVFTLNGG 400          
BLAST of mRNA_H-paniculata_contig42675.10912.1 vs. uniprot
Match: UPI002025A47D (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI002025A47D)

HSP 1 Score: 184 bits (466), Expect = 5.540e-49
Identity = 121/399 (30.33%), Postives = 209/399 (52.38%), Query Frame = 1
Query:   79 EPKNHREAQASPEWEHWQNAEEVEMQGLIDSGVWTQVERPKNKLVVSTIIIYKRKIGEDGKVEKHKCRLVAHGDRQIKGIHSQEASSPAPAAASTRMILSLAAIQDWEVRHVDLEQAYLQAPID*KIIVENPV*YREFPEA--VGRLDRAIYGMVQAGKCWSMKVIRELTAKGFEQSHADPCVFRKLVDGEMVAVIIYVNGLLISIKGPKIVDELRADLRLDHKLKDLGDAKYYLGCEITCDRKKRKTKIDQHLYARSMAEHFGI--LKTSMLPVRAGNNTMIKNDGPKTSEKAEEMRGVLILGDSRGAHLGGDNNATRHPTRRTHYV-KFCENAVVEHKRAVGNILQYVLRTADLGITYGGQDCGVEMLV--YADSDYTTCQDSRRSVSSGAVLLGGG 1254
            EP N+ EA A P+   W  A + E++ + ++ VWT  + P ++  +    I+K+K   DG V  +K RLVA G RQ++G+   E  SP     S R++L++AA  D+E+  +D++ A+L   +  ++ +  P  + +   A  V +L R+IYG+VQA + W+++    + A GF Q++ + CV++K+    +  +I+YV+ +L+     +++D ++A L     +KDLG+A Y LG +I  DR +R   + Q  Y   + + F +   K   LPV  G   +     P T++  EEM  V+    + G+ +                V ++  N   EH  AV NIL+Y+ RT D+ + YGG +   E++V  Y D+ + T  D  +S +    +L GG
Sbjct:   15 EPSNYEEAMAGPDSNKWLEAMKSEIESMYENKVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAYYDYEIWQMDVKTAFLNGHLKEELYMMQPEGFVDPKNANKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFMQTYGEACVYKKVSGSSVAFLILYVDDILLMGNDIELLDSIKAYLNKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFKMDQSKKGFLPVLQGVR-LSSAQCPTTAKDKEEMS-VIPYASAIGSIMYAMLCTRPDVNLAVSLVGRYQSNPGKEHWTAVKNILKYLKRTKDMFLVYGGDE---ELVVKGYVDASFDTDLDDSKSQTGYVYILNGG 408          
BLAST of mRNA_H-paniculata_contig42675.10912.1 vs. uniprot
Match: A0A1Y1IVX6_KLENI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVX6_KLENI)

HSP 1 Score: 187 bits (474), Expect = 3.000e-48
Identity = 122/398 (30.65%), Postives = 207/398 (52.01%), Query Frame = 1
Query:   79 EPKNHREAQASPEWEHWQNAEEVEMQGLIDSGVWTQVERPKNKLVVSTIIIYKRKIGEDGKVEKHKCRLVAHGDRQIKGIHSQEASSPAPAAASTRMILSLAAIQDWEVRHVDLEQAYLQAPID*KIIVENPV*YREF-PEAVGRLDRAIYGMVQAGKCWSMKVIRELTAKGFEQSHADPCVFRKLVDGEMVAVIIYVNGLLISIKGPKIVDELRADLRLDHKLKDLGDAKYYLGCEITCDRKKRKTKIDQHLYARSMAEHFGI--LKTSMLPVRAGNNTMIKNDGPKTSEK--AEEMRGVLILGDSRGAHLGGDNNATRHPTRRTHYVKFCENAVVEHKRAVGNILQYVLRTADLGITYGGQDCGVEMLV-YADSDYTTCQDSRRSVSSGAVLLGGG 1254
            EP++++EA    + E W+ + + EM+ L+++G W  V +P+    V    +YK K    G +E+ K RLVA G  Q +G+  +E  +P     + R +L + A +D E+  +D++ A+L   ++ +I ++ P  Y +  PE V RL + IYG+ QA + W  K+  EL    F  S +D  +F  ++DGE V V+++V+ +LI+ KG + + +++A L     ++DLG A+Y+LG E+T DR+ R  K+ Q    + +   +G+   K    P+ +G     + D   T +   +E +  +L L       +     A           ++      EH RA   + +Y+  TA+LG+T+GG     E LV YAD+DY    DSRRS +    L+ GG
Sbjct:  560 EPQSYQEAVGGEQSEIWRQSMDDEMRSLLENGTWELVPKPEGVKPVPMKWVYKIKRDAAGNIERFKSRLVAKGFLQRQGVDFEEVYAPVSKHTTLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPETVCRLKKTIYGLRQAPRAWHQKLKTELGEIEFRASESDAALFTGVIDGERVWVVVWVDDILIAAKGEQRLAKVKAHLSEKFDVRDLGPAEYFLGMELTRDRRARTIKLTQKKLTKELLGRYGLEAAKARSTPLSSGEKLQREGDPLDTGKYPYSELVGSLLYLSVCTRPDIAQAVGAL---------ARYMAGPTEEHWRAALGVARYLSGTAELGVTFGGS---AEPLVGYADADYAGDVDSRRSTTGYVFLVYGG 945          
BLAST of mRNA_H-paniculata_contig42675.10912.1 vs. uniprot
Match: UPI002025788D (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI002025788D)

HSP 1 Score: 184 bits (467), Expect = 4.680e-48
Identity = 121/399 (30.33%), Postives = 210/399 (52.63%), Query Frame = 1
Query:   79 EPKNHREAQASPEWEHWQNAEEVEMQGLIDSGVWTQVERPKNKLVVSTIIIYKRKIGEDGKVEKHKCRLVAHGDRQIKGIHSQEASSPAPAAASTRMILSLAAIQDWEVRHVDLEQAYLQAPID*KIIVENPV*YREFPEA--VGRLDRAIYGMVQAGKCWSMKVIRELTAKGFEQSHADPCVFRKLVDGEMVAVIIYVNGLLISIKGPKIVDELRADLRLDHKLKDLGDAKYYLGCEITCDRKKRKTKIDQHLYARSMAEHFGI--LKTSMLPVRAGNNTMIKNDGPKTSEKAEEMRGVLILGDSRGAHLGGDNNATRHPTRRTHYV-KFCENAVVEHKRAVGNILQYVLRTADLGITYGGQDCGVEMLV--YADSDYTTCQDSRRSVSSGAVLLGGG 1254
            EP N+ EA A P+ + W  A + E+  + ++ VWT  + P ++  +    I+K+K   DG V  +K RLVA G RQ++G+   E  SP     S R++L++AA  D+E+  +D++ A+L   +  ++ +  P  + +   A  V +L R+IYG+VQA + W+++    + A GF Q++ + CV++K+    +  +I+YV+ +L+     +++D ++A L     +KDLG+A Y LG +I  DR +R   + Q  Y   + + F +   K   LPV  G   +     P T++  EEM  V+    + G+ +                V ++  N  +EH  AV NIL+Y+ RT D+ + YGG +   E++V  Y D+ + T  D  +S +    +L GG
Sbjct:  191 EPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKKVSGSSVAFLILYVDDILLMGNDIELLDSIKAYLNKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFKMDQSKKGFLPVLQGVR-LSSAQCPTTAKDKEEMS-VIPYASAIGSIMYAMLCTRPDVNLAVSLVGRYQSNPGMEHWTAVKNILKYLKRTKDMFLVYGGDE---ELVVKGYVDASFDTDLDDSKSQTGYVYILNGG 584          
BLAST of mRNA_H-paniculata_contig42675.10912.1 vs. uniprot
Match: A0A1Y1IQX0_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQX0_KLENI)

HSP 1 Score: 183 bits (465), Expect = 5.380e-47
Identity = 120/398 (30.15%), Postives = 207/398 (52.01%), Query Frame = 1
Query:   79 EPKNHREAQASPEWEHWQNAEEVEMQGLIDSGVWTQVERPKNKLVVSTIIIYKRKIGEDGKVEKHKCRLVAHGDRQIKGIHSQEASSPAPAAASTRMILSLAAIQDWEVRHVDLEQAYLQAPID*KIIVENPV*YREF-PEAVGRLDRAIYGMVQAGKCWSMKVIRELTAKGFEQSHADPCVFRKLVDGEMVAVIIYVNGLLISIKGPKIVDELRADLRLDHKLKDLGDAKYYLGCEITCDRKKRKTKIDQHLYARSMAEHFGI--LKTSMLPVRAGNNTMIKNDGPKTSEK--AEEMRGVLILGDSRGAHLGGDNNATRHPTRRTHYVKFCENAVVEHKRAVGNILQYVLRTADLGITYGGQDCGVEMLV-YADSDYTTCQDSRRSVSSGAVLLGGG 1254
            EP++++EA    + E W+ + + EM+ L+++G W  V +P+    V    +YK K    G +E+ K RLVA G  Q +G+  +E  +P     + R +L + A +D E+  +D++ A+L   ++ +I ++ P  Y +  P+ V RL + IYG+ QA + W  ++  EL    F+ S +D  +F  +VDGE V V+++V+ +LI+  G K + +++A L     ++DLG A+Y+LG E+T DR+ R  K+ Q    + +   + +   K    P+ +G     + D   T +   +E +  +L L       +     A           ++      EH RA   +++Y+  TA+LG+T+GG     E LV YAD+DY    DSRRS +    L+ GG
Sbjct:  835 EPQSYQEAVGGEQSEIWRQSMDDEMRSLLENGTWELVPKPEGVKPVPMKWVYKIKQDAAGNIERFKSRLVAKGFLQRQGVDFEEVYAPVSKHTTLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPKTVCRLKKTIYGLRQAPRAWHQRLKAELGEIEFQASESDAALFTGVVDGERVWVVVWVDDILIAAAGEKRLAKVKAHLSRKFDVRDLGPAEYFLGMELTRDRRARTVKLTQKKLTKELLGRYELEAAKARSTPLSSGEKLQKEGDPLDTGKYPYSELVGSLLYLSVCTRPDIAQAVGAL---------ARYMSGPTQEHWRAALGVVRYLSGTAELGVTFGGS---AEPLVGYADADYAGDVDSRRSTTGYVFLVYGG 1220          
BLAST of mRNA_H-paniculata_contig42675.10912.1 vs. uniprot
Match: A0A5N6LW24_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LW24_9ASTR)

HSP 1 Score: 182 bits (463), Expect = 7.770e-47
Identity = 120/399 (30.08%), Postives = 205/399 (51.38%), Query Frame = 1
Query:   79 EPKNHREAQASPEWEHWQNAEEVEMQGLIDSGVWTQVERPKNKLVVSTIIIYKRKIGEDGKVEKHKCRLVAHGDRQIKGIHSQEASSPAPAAASTRMILSLAAIQDWEVRHVDLEQAYLQAPID*KIIVENPV*YRE--FPEAVGRLDRAIYGMVQAGKCWSMKVIRELTAKGFEQSHADPCVFRKLVDGEMVAVIIYVNGLLISIKGPKIVDELRADLRLDHKLKDLGDAKYYLGCEITCDRKKRKTKIDQHLYARSMAEHFGI--LKTSMLPVRAGNNTMIKNDGPKTSEKAEEMRGV---LILGDSRGAHLGGDNNATRHPTRRTHYVKFCENAVVEHKRAVGNILQYVLRTADLGITYGGQDCGVEMLVYADSDYTTCQDSRRSVSSGAVLLGGG 1254
            EP NH+ A + PE   W +A   EMQ + D+ VW  VE P     V +  I+KRK    G V  +K RLVA G  Q +G+   E  SP     S R++L++AA  D+E+  +D++ A+L   +   + +  P  + +  +P  V +L+++IYG+ QA +CW+++  +++   GF ++  +PCV+RK     +  +I+YV+ +LI      +++E++  L     +KDLG+A Y LG +I  DR KR   + Q  Y   M   F +   K   +P+  G   + K+  P T  +   M+ +     +G    A L    + +   +  +   +F ++  + H  AV NIL+Y+ RT ++ + +GG +  + +  Y D+ + T +D  RS S     L GG
Sbjct:  465 EPTNHKTAISDPESAKWLDAMNSEMQSMRDNQVWDLVELPPGSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPEGFVDPKYPNKVCKLNKSIYGLKQASRCWNLRFDQKIKEFGFIKNEDEPCVYRKASGRTISFLILYVDDILIIGNNIPMLNEVKHWLGNCFAMKDLGEAAYILGIKIHRDRSKRLLGMSQSAYIDKMMTRFNMENSKKGTIPMTKGT-VLNKSQSPSTDIEIRRMQAIPYASAIGSIMYAMLCTRPDVSYALSMTS---RFQQSPGIAHWTAVKNILKYLRRTKEMFLIFGGVEEELTVRCYTDASFQTDRDDSRSQSGFVFTLNGG 859          
BLAST of mRNA_H-paniculata_contig42675.10912.1 vs. uniprot
Match: A0A5N6MMD4_9ASTR (Uncharacterized protein n=6 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MMD4_9ASTR)

HSP 1 Score: 182 bits (461), Expect = 1.800e-46
Identity = 119/399 (29.82%), Postives = 204/399 (51.13%), Query Frame = 1
Query:   79 EPKNHREAQASPEWEHWQNAEEVEMQGLIDSGVWTQVERPKNKLVVSTIIIYKRKIGEDGKVEKHKCRLVAHGDRQIKGIHSQEASSPAPAAASTRMILSLAAIQDWEVRHVDLEQAYLQAPID*KIIVENPV*YRE--FPEAVGRLDRAIYGMVQAGKCWSMKVIRELTAKGFEQSHADPCVFRKLVDGEMVAVIIYVNGLLISIKGPKIVDELRADLRLDHKLKDLGDAKYYLGCEITCDRKKRKTKIDQHLYARSMAEHFGI--LKTSMLPVRAGNNTMIKNDGPKTSEKAEEMRGV---LILGDSRGAHLGGDNNATRHPTRRTHYVKFCENAVVEHKRAVGNILQYVLRTADLGITYGGQDCGVEMLVYADSDYTTCQDSRRSVSSGAVLLGGG 1254
            EP N++ A   P+   W +A   EMQ + D+ VW  VE P     V +  I+KRK    G V  +K RLVA G  Q +G+   E  SP     S R++L++AA  D+E+  +D++ A+L   +   + +  P  + +  +P  V +L+++IYG+ QA +CW+++  +++   GF ++  +PCV+RK     +  +I+YV+ +LI      +++E++  L     +KDLG+A Y LG +I  DR KR   + Q  Y   M   F +   K   +P+  G   + K+  P T  +   M+ +     +G    A L    + +   +  +   +F +N  + H  AV NIL+Y+ RT ++ + +GG +  + +  Y D+ + T +D  RS S     L GG
Sbjct:  798 EPTNYKSAIIDPKSAKWLDAMNSEMQSMRDNQVWDLVELPPGSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRVLLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYPSKVCKLNKSIYGLKQASRCWNLRFDQKIKEFGFIKNEDEPCVYRKASGSTISFLILYVDDILIIGNNIPMLNEVKHWLGTCFAMKDLGEAAYILGIKIHRDRSKRLLGLSQSTYIDKMMTRFNMENSKKGTIPMTKGT-VLNKSQSPSTDIEIRRMQAIPYASAIGSIMYAMLCTRPDVSYALSMTS---RFQQNPGIAHWTAVKNILKYLRRTKEMFLIFGGVEEELTVRCYTDASFQTDRDDSRSQSGFVFTLNGG 1192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42675.10912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZH7_9PHAE7.100e-5233.42Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3I1_9PHAE1.880e-5032.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A177T2I3_9BASI1.680e-4930.85Uncharacterized protein n=1 Tax=Tilletia indica Ta... [more]
UPI00202464352.480e-4931.17hypothetical protein n=2 Tax=Proteus mirabilis Tax... [more]
UPI002025A47D5.540e-4930.33hypothetical protein n=1 Tax=Proteus mirabilis Tax... [more]
A0A1Y1IVX6_KLENI3.000e-4830.65Integrase catalytic domain-containing protein (Fra... [more]
UPI002025788D4.680e-4830.33hypothetical protein n=2 Tax=Proteus mirabilis Tax... [more]
A0A1Y1IQX0_KLENI5.380e-4730.15Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A5N6LW24_9ASTR7.770e-4730.08Integrase catalytic domain-containing protein n=2 ... [more]
A0A5N6MMD4_9ASTR1.800e-4629.82Uncharacterized protein n=6 Tax=Mikania micrantha ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42675contigH-paniculata_contig42675:399..1661 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score104.0
Seed ortholog evalue1e-19
Seed eggNOG ortholog164328.Phyra71619
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs3QHW0@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size1263
Cds size732
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930297.4218626-UTR-H-paniculata_contig42675:398..9291622930297.4218626-UTR-H-paniculata_contig42675:398..929Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig42675 399..929 +
1691481230.5352879-UTR-H-paniculata_contig42675:398..9291691481230.5352879-UTR-H-paniculata_contig42675:398..929Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig42675 399..929 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930297.438142-CDS-H-paniculata_contig42675:929..16611622930297.438142-CDS-H-paniculata_contig42675:929..1661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig42675 930..1661 +
1691481230.5484657-CDS-H-paniculata_contig42675:929..16611691481230.5484657-CDS-H-paniculata_contig42675:929..1661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig42675 930..1661 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42675.10912.1prot_H-paniculata_contig42675.10912.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig42675 930..1661 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig42675.10912.1

>prot_H-paniculata_contig42675.10912.1 ID=prot_H-paniculata_contig42675.10912.1|Name=mRNA_H-paniculata_contig42675.10912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
MVQAGKCWSMKVIRELTAKGFEQSHADPCVFRKLVDGEMVAVIIYVNGLL
ISIKGPKIVDELRADLRLDHKLKDLGDAKYYLGCEITCDRKKRKTKIDQH
LYARSMAEHFGILKTSMLPVRAGNNTMIKNDGPKTSEKAEEMRGVLILGD
SRGAHLGGDNNATRHPTRRTHYVKFCENAVVEHKRAVGNILQYVLRTADL
GITYGGQDCGVEMLVYADSDYTTCQDSRRSVSSGAVLLGGGGG*
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mRNA from alignment at H-paniculata_contig42675:399..1661+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig42675.10912.1 ID=mRNA_H-paniculata_contig42675.10912.1|Name=mRNA_H-paniculata_contig42675.10912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1263bp|location=Sequence derived from alignment at H-paniculata_contig42675:399..1661+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTTACCACGAAGGCAAAATCATGACAATGCCGGTCGCACTGGCGATGCC CGAAGAACTGAGGGGCGACCTTCCCGTGGAGCCCAAGAATCACCGGGAGG CGCAGGCGTCACCGGAGTGGGAACACTGGCAAAACGCGGAGGAAGTCGAG ATGCAAGGCCTCATCGACAGCGGGGTTTGGACGCAAGTGGAGCGCCCGAA GAACAAGTTGGTCGTGAGCACGATCATCATCTATAAAAGGAAAATCGGCG AGGACGGCAAAGTGGAGAAACACAAGTGTCGCCTGGTCGCCCACGGCGAC CGTCAGATCAAGGGCATCCACTCCCAGGAAGCTTCGTCCCCTGCACCCGC AGCGGCCAGCACGAGAATGATCTTGTCGCTTGCGGCCATCCAAGACTGGG AGGTTCGGCACGTCGACTTAGAACAAGCGTATCTGCAGGCGCCCATCGAC TAGAAGATTATCGTCGAAAATCCCGTATAATACCGGGAGTTTCCAGAAGC GGTGGGGCGCCTCGACAGGGCAATCTACGGAATGGTTCAAGCCGGCAAAT GCTGGAGTATGAAGGTTATCAGGGAACTCACGGCGAAAGGGTTCGAGCAA TCGCACGCCGACCCGTGTGTGTTCCGCAAGCTCGTGGACGGGGAGATGGT CGCAGTGATCATATACGTGAACGGCCTTCTGATCAGCATCAAGGGACCCA AAATCGTGGACGAGTTGCGGGCAGACCTGCGATTGGATCACAAGCTCAAA GACCTGGGAGATGCAAAGTACTATTTAGGATGCGAAATCACCTGCGATAG AAAAAAGAGGAAGACCAAGATCGACCAGCACCTCTACGCGAGGTCTATGG CCGAGCATTTTGGGATACTCAAGACCAGCATGCTCCCAGTCAGGGCGGGA AACAATACCATGATCAAAAACGACGGGCCAAAGACCTCAGAGAAAGCCGA GGAGATGAGAGGTGTTCTCATACTGGGAGACAGTAGGGGTGCTCATTTGG GCGGCGACAATAACGCGACCCGACATCCCACACGCCGTACGCACTACGTA AAATTCTGTGAGAACGCAGTGGTGGAGCACAAGAGAGCTGTGGGAAACAT TCTGCAGTACGTACTAAGGACCGCTGACCTGGGAATCACCTATGGCGGAC AGGACTGCGGGGTCGAAATGCTAGTTTACGCTGACTCGGACTACACAACG TGCCAGGACAGCCGACGCTCGGTCTCCAGCGGAGCGGTACTGCTGGGGGG GGGGGGGGGGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig42675:399..1661+

>mRNA_H-paniculata_contig42675.10912.1 ID=mRNA_H-paniculata_contig42675.10912.1|Name=mRNA_H-paniculata_contig42675.10912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig42675:399..1661+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTCAAGCCGGCAAATGCTGGAGTATGAAGGTTATCAGGGAACTCAC
GGCGAAAGGGTTCGAGCAATCGCACGCCGACCCGTGTGTGTTCCGCAAGC
TCGTGGACGGGGAGATGGTCGCAGTGATCATATACGTGAACGGCCTTCTG
ATCAGCATCAAGGGACCCAAAATCGTGGACGAGTTGCGGGCAGACCTGCG
ATTGGATCACAAGCTCAAAGACCTGGGAGATGCAAAGTACTATTTAGGAT
GCGAAATCACCTGCGATAGAAAAAAGAGGAAGACCAAGATCGACCAGCAC
CTCTACGCGAGGTCTATGGCCGAGCATTTTGGGATACTCAAGACCAGCAT
GCTCCCAGTCAGGGCGGGAAACAATACCATGATCAAAAACGACGGGCCAA
AGACCTCAGAGAAAGCCGAGGAGATGAGAGGTGTTCTCATACTGGGAGAC
AGTAGGGGTGCTCATTTGGGCGGCGACAATAACGCGACCCGACATCCCAC
ACGCCGTACGCACTACGTAAAATTCTGTGAGAACGCAGTGGTGGAGCACA
AGAGAGCTGTGGGAAACATTCTGCAGTACGTACTAAGGACCGCTGACCTG
GGAATCACCTATGGCGGACAGGACTGCGGGGTCGAAATGCTAGTTTACGC
TGACTCGGACTACACAACGTGCCAGGACAGCCGACGCTCGGTCTCCAGCG
GAGCGGTACTGCTGGGGGGGGGGGGGGGGTAAATGGTTCAAGCCGGCAAA
TGCTGGAGTATGAAGGTTATCAGGGAACTCACGGCGAAAGGGTTCGAGCA
ATCGCACGCCGACCCGTGTGTGTTCCGCAAGCTCGTGGACGGGGAGATGG
TCGCAGTGATCATATACGTGAACGGCCTTCTGATCAGCATCAAGGGACCC
AAAATCGTGGACGAGTTGCGGGCAGACCTGCGATTGGATCACAAGCTCAA
AGACCTGGGAGATGCAAAGTACTATTTAGGATGCGAAATCACCTGCGATA
GAAAAAAGAGGAAGACCAAGATCGACCAGCACCTCTACGCGAGGTCTATG
GCCGAGCATTTTGGGATACTCAAGACCAGCATGCTCCCAGTCAGGGCGGG
AAACAATACCATGATCAAAAACGACGGGCCAAAGACCTCAGAGAAAGCCG
AGGAGATGAGAGGTGTTCTCATACTGGGAGACAGTAGGGGTGCTCATTTG
GGCGGCGACAATAACGCGACCCGACATCCCACACGCCGTACGCACTACGT
AAAATTCTGTGAGAACGCAGTGGTGGAGCACAAGAGAGCTGTGGGAAACA
TTCTGCAGTACGTACTAAGGACCGCTGACCTGGGAATCACCTATGGCGGA
CAGGACTGCGGGGTCGAAATGCTAGTTTACGCTGACTCGGACTACACAAC
GTGCCAGGACAGCCGACGCTCGGTCTCCAGCGGAGCGGTACTGCTGGGGG
GGGGGGGGGGGTAA
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