mRNA_H-paniculata_contig4264.10901.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4264.10901.1
Unique NamemRNA_H-paniculata_contig4264.10901.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4264.10901.1 vs. uniprot
Match: D8LLI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI5_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 2.380e-98
Identity = 160/225 (71.11%), Postives = 184/225 (81.78%), Query Frame = 1 
Query:  328 TRDKAIGIALSAMVALTSA-RPVKAIDPIKKTQEAYRIWRQEEADNILGGGELASPEGGKTLQPVLALIPIITLRLRLDMVETSLKDPRRFREGLDILQSQDFQKKDIKRVFNAYSDNIYYLPDSERENKYLQGGATPSSRQTLQYLLRNDVIDNVEALAAEIAYLIREREESEAEGLGSPYDSDEKDLRMYLDKCKSGFDRYLGMVLQNEIDEATEYAKMALAR 999
            +R +AIG+ ++++ +L  A  P   +DP++K QE  RI  QEE DN+     LASPEGGKT+QPVLAL+PIITLRL+LD VE +LKDPRRF   L ILQ+QDFQKKDIKRVFNAYSDNIYYLPDS+RENKYLQGGATPSSRQTLQYLLRNDVIDNVEAL AEIAYLIRERE    +G  S  D+DEKDLRMYL KCK GFD+YLGMVLQNEIDEAT+ AK+ + R
Sbjct:   11 SRSRAIGLGMASLFSLAVAPTPGLGLDPVRKVQEQLRIRAQEEFDNVEA---LASPEGGKTIQPVLALVPIITLRLQLDEVENNLKDPRRFGAALTILQAQDFQKKDIKRVFNAYSDNIYYLPDSDRENKYLQGGATPSSRQTLQYLLRNDVIDNVEALTAEIAYLIRERESGGEDG--SEADTDEKDLRMYLGKCKQGFDKYLGMVLQNEIDEATDMAKLVVDR 230
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BLAST of mRNA_H-paniculata_contig4264.10901.1 vs. uniprot
Match: A0A6H5J809_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J809_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 1.010e-96
Identity = 169/259 (65.25%), Postives = 198/259 (76.45%), Query Frame = 1 
Query:  223 RRTRSFHHTTPDDVTYSNEHVESRAQDAISFPNAVTRDKAIGIALSAMVALTSA-RPVKAIDPIKKTQEAYRIWRQEEADNILGGGELASPEGGKTLQPVLALIPIITLRLRLDMVETSLKDPRRFREGLDILQSQDFQKKDIKRVFNAYSDNIYYLPDSERENKYLQGGATPSSRQTLQYLLRNDVIDNVEALAAEIAYLIREREESEAEGLGSPYDSDEKDLRMYLDKCKSGFDRYLGMVLQNEIDEATEYAKMALA 996
            RR+R + H      T S   + S +  A   P   +R++AIG+ ++++ +L  A  P  A+DP++K QE  RI  QEE DN+     LASPEGGKTLQPVLAL+PIITLRL+LD VE++LKDPR F   L ILQ+QDFQKKDIKRVFNAYSDNIYYLPDS+RENKYLQGGATPSSRQTLQYLLRNDVIDNVEAL AEI+YLIRERE      +G   D+DEKDLRMYL KCK  FD+YLGMVLQNEIDEAT+ AK+ALA
Sbjct:   48 RRSRFWKHCPAGRTTSS---IPSMSLPAEGGPT--SRNRAIGLGVASLFSLAVAPTPGLALDPVRKVQEQLRIRAQEEFDNVEA---LASPEGGKTLQPVLALVPIITLRLQLDEVESNLKDPRLFGAALTILQAQDFQKKDIKRVFNAYSDNIYYLPDSDRENKYLQGGATPSSRQTLQYLLRNDVIDNVEALTAEISYLIRERE------VGGEADTDEKDLRMYLGKCKQSFDKYLGMVLQNEIDEATDMAKVALA 292
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BLAST of mRNA_H-paniculata_contig4264.10901.1 vs. uniprot
Match: A0A835ZF78_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF78_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.680e-37
Identity = 81/172 (47.09%), Postives = 107/172 (62.21%), Query Frame = 1 
Query:  475 GELASPEGGKTLQPVLALIPIITLRLRLDMVETSLK--DPRRFREGLDILQSQDFQKKDIKRVFNAYSDNIYYLPDSERENKYLQGGATPSSRQTLQYLLRNDVIDNVEALAAEIAYLIREREESEAEGLGSPYDSDEKDLRMYLDKCKSGFDRYLGMVLQNEIDEATEYAK 984
            GELA P G KTL PVLAL+PI+ LR+ LD+VE+ LK      ++  L++L S  +  K+IKR FN YSDNIY    S R N YL GGA P+S++T QYLLRN+V+ +V+ L AE+AYL+R+       G+G     D  DL  YL   K  FD YL +    ++D A E A+
Sbjct:    1 GELADPTGRKTLSPVLALVPIVRLRMGLDLVESWLKLNTTEGWQRALEVLSSSAYSAKEIKRQFNRYSDNIYIEVGSARANAYLDGGAMPTSKETTQYLLRNEVLAHVDELTAELAYLLRD-----GGGVGG---GDTADLYTYLSAAKKSFDDYLQLAPPLDLDGAAEVAR 164
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BLAST of mRNA_H-paniculata_contig4264.10901.1 vs. uniprot
Match: A0A7S2IB95_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IB95_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.870e-30
Identity = 86/232 (37.07%), Postives = 122/232 (52.59%), Query Frame = 1 
Query:  316 PNAVTRDKAIGI---ALSAMVALTSARPVKAIDPIKKTQ-------EAYRIWRQEEADNILGGGELASPEGGKTLQPVLALIPIITLRLRLDMVETSLKDP--RRFREGLDILQSQDFQKKDIKRVFNAYSDNIYYLPDSERENKYLQGGATPSSRQTLQYLLRNDVIDNVEALAAEIAYLIREREESEAEGLGSPYDSDEKDLRMYLDKCKSGFDRYLGMVLQNEIDEATE 975
            P   +R KA+     A ++++A   A P  A D + K         E  RIW Q EADNI  GGELA             L+PI+ +   L      ++ P  +   +  DIL   +F+K   K++FNA++DNIYY  D +R N YL GGATP + Q++ YLLRNDV+ NVEAL AEI YLI++++  EA     P +++  DL +Y      G  +YL +V   E+    E
Sbjct:   59 PIITSRRKALSFITTATASVLASAVAEPASARDELFKPNPLTNPVLEKVRIWNQAEADNISYGGELAPGSIKGRAAYAKLLVPILGIEKDLLAANELVRVPDGKGLTQANDILSKSEFEKISFKKIFNAFADNIYYS-DPDRANLYLGGGATPKNEQSIAYLLRNDVLTNVEALQAEITYLIKQKKNIEAGTEEGPLETE--DLYVYAQTAVDGMKKYLELVPPGELKMGRE 287
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BLAST of mRNA_H-paniculata_contig4264.10901.1 vs. uniprot
Match: A0A1Z5KPH8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPH8_FISSO)

HSP 1 Score: 126 bits (316), Expect = 4.400e-30
Identity = 81/192 (42.19%), Postives = 114/192 (59.38%), Query Frame = 1 
Query:  424 EAYRIWRQEEADNILGGGELASPEGGKTLQPVLA--LIPIITLRLRLDMVETSLKDP--RRFREGLD-ILQSQDFQKKDIKRVFNAYSDNIYYLPDSERENKYLQGGATPSSRQTLQYLLRNDVIDNVEALAAEIAYLIREREESEAEGLGSPYDSDEKDLRMYLDKCKSGFDRYLGMVLQNEIDEATEYAK 984
            E  RIW Q EADNI  GGEL   E GK L PV +  L+PI+ +   L+ +   L     R   EG+  I++ + ++K + K++FNAY DNIYY  D +R N YL GGATP + QTL YL RN+++ NVE L AE+A+L++ REES       P D+    + +  + C++   RYL +V  +E+ EA E  K
Sbjct:   72 EQIRIWEQNEADNIKYGGELERGEAGK-LNPVFSKMLVPILEISDDLERINRLLASDTSREALEGVQSIIRQKRYEKIEFKKIFNAYGDNIYYS-DPDRANMYLGGGATPKNEQTLAYLQRNEILTNVEDLQAEVAFLLKNREES-------PEDA----INLAKNACQA-MRRYLEVVPPSELQEARELLK 249
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BLAST of mRNA_H-paniculata_contig4264.10901.1 vs. uniprot
Match: B5Y3I0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3I0_PHATC)

HSP 1 Score: 125 bits (314), Expect = 1.110e-29
Identity = 80/192 (41.67%), Postives = 108/192 (56.25%), Query Frame = 1 
Query:  424 EAYRIWRQEEADNILGGGEL----ASPEGGKTLQPVLALIPIITLRLRLDMVETSLKDPR-RFREGLDILQSQDFQKKDIKRVFNAYSDNIYYLPDSERENKYLQGGATPSSRQTLQYLLRNDVIDNVEALAAEIAYLIREREESEAEGLGSPYDSDEKDLRMYLDKCKSGFDRYLGMVLQNEIDEATEYAK 984
            E  RIW Q EAD++  GGEL    A  +G     P L L+PI+ +   LD VE      R  + +  +IL+ + +QK + K+ FNAYSDNIYY  D +R N YL GGATP + Q+L YLLRND++ NVEAL +EI YL++E  ES             +DL +Y         RY+G+V   E+ +A E  K
Sbjct:   88 EKIRIWEQAEADDLKYGGELERGDAGNKGKVEAYPRL-LVPILQMANELDEVERICLGSRDSWAQAQNILKQKKYQKIEFKKQFNAYSDNIYYS-DPDRANLYLGGGATPKTEQSLAYLLRNDILTNVEALQSEIEYLLKEPSESS------------EDLVLYATTANRAMKRYMGIVPPGELVKARELIK 265
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BLAST of mRNA_H-paniculata_contig4264.10901.1 vs. uniprot
Match: A0A7R9WN96_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WN96_9STRA)

HSP 1 Score: 125 bits (313), Expect = 6.310e-29
Identity = 82/221 (37.10%), Postives = 119/221 (53.85%), Query Frame = 1 
Query:  340 AIGIALSAMVALTSARPVKAIDPIKKTQ-------EAYRIWRQEEADNILGGGELASPEGGKT----LQPVLALIPIITLRLRLDMVETSLKDPRRFREGLDILQSQDFQKKDIKRVFNAYSDNIYYLPDSERENKYLQGGATPSSRQTLQYLLRNDVIDNVEALAAEIAYLIREREESEAEGLGSPYDSDEKDLRMYLDKCKSGFDRYLGMVLQNEIDEA 969
            A+G+ L AM    +  P +A D + K         E  RIW Q EADNI   GEL + + G        P L L+PI+ +   L  V+  ++D  R+ + L I+Q + ++K   K+ FNAY DNIYY  D +R N YL GGATP + Q+L YLLRNDV+ NVE L AE+ YL++  E+            + +DL  + D   +   +YL +V   E+++A
Sbjct:  118 AVGLGLIAM----NPTPAQARDDLFKKNPLTNPMLEQIRIWEQAEADNIKYSGELEAGDAGNKGKVDAYPKL-LMPILEIDYELTQVKKLVRDESRWPDALTIMQQKKYEKIPFKKAFNAYGDNIYYS-DPDRANVYLGGGATPKTEQSLAYLLRNDVLTNVENLRAELEYLMKSGEK------------ETEDLYKFADIATNAMKKYLAIVPPGELEQA 320
[Close]
BLAST of mRNA_H-paniculata_contig4264.10901.1 vs. uniprot
Match: A0A6U3RMQ4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RMQ4_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.360e-28
Identity = 81/246 (32.93%), Postives = 122/246 (49.59%), Query Frame = 1 
Query:  265 TYSNEHVESRAQDAISFPNAVTRDKAIGIALSAMVALTSARPVKAIDPIKKTQ-------EAYRIWRQEEADNILGGGELASPEGGKTLQPVLALIPIITLRLRLDMVETSLKDPRR--FREGLDILQSQDFQKKDIKRVFNAYSDNIYYLPDSERENKYLQGGATPSSRQTLQYLLRNDVIDNVEALAAEIAYLIREREESEAEGLGSPYDSDEKDLRMYLDKCKSGFDRYLGMVLQNEIDEATE 975
            T   E+  S  + A+SF +       +G+    +   T  +P  A D + K         E  RIW Q EAD +  GGELA             L+P++ +   L      ++ P      +  DIL    F K + K+VFNA++DNIYY  D +R N YL GGATP + Q++ YLLRNDV+ N+EAL AE+ Y++++++       G P +++  DL +Y   C  G  +YL +V   E+    E
Sbjct:   45 TQEEENSMSTRRKALSFMS----QSFLGLTAGVVAMGTQPQPAHAKDELFKPNPLTNPVLEQVRIWNQAEADQLNYGGELAPGSSKGRAAYAKLLVPVLEIERDLQTTNDLVRQPNGAGLEKANDILSKSQFVKINFKKVFNAFADNIYYS-DPDRANLYLGGGATPKNEQSIAYLLRNDVLTNLEALQAEVIYVMKQQKG------GEPLETE--DLYLYAQSCVDGMTKYLELVPPGELKMGRE 277
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BLAST of mRNA_H-paniculata_contig4264.10901.1 vs. uniprot
Match: A0A7S3Q034_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q034_9STRA)

HSP 1 Score: 121 bits (304), Expect = 8.560e-28
Identity = 88/232 (37.93%), Postives = 126/232 (54.31%), Query Frame = 1 
Query:  325 VTRDKAIGIALSAMVALTSARPVKAI--------DPI-KKTQEAYRIWRQEEADNILGGGELA--SPEGGKTLQPVLALIPIITLRLRLDMVETSLKDPRRFREGLD----ILQSQDFQKKDIKRVFNAYSDNIYYLPDSERENKYLQGGATPSSRQTLQYLLRNDVIDNVEALAAEIAYLIREREESEAEGLGSPYDSDEKDLRMYLDKCKSGFDRYLGMVLQNEIDEATE 975
            ++R   +   L A VAL +  PVKA         +P+  K  E  RI  Q EADNI  GGELA  SP G    Q    L+PI+ ++   D ++T +  P    +GL     IL  + ++K   K+ FNA++DNIYY  D +R N YL GGA P + Q++ YL+RNDV+ NVE L AE+ YLI+E        + +  + + +DL +Y+  CK G  +YL +V   E+  A E
Sbjct:   92 MSRRSIMSAVLPAAVAL-ALNPVKASARDELFKPNPLTNKVLEKIRILEQAEADNIQYGGELAPGSPIGRD--QYAKLLVPIMIIQKEFDELDTLVHMPNG--DGLAQADIILSKKQYEKLQFKKTFNAFADNIYYS-DPDRANAYLGGGAVPKNEQSIAYLIRNDVLTNVENLQAEVTYLIKE--------IKAGNEMETEDLYLYVQTCKDGMVKYLDLVPPGEVKIAKE 309
[Close]
BLAST of mRNA_H-paniculata_contig4264.10901.1 vs. uniprot
Match: A0A7S2RVH1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RVH1_9STRA)

HSP 1 Score: 119 bits (297), Expect = 9.500e-27
Identity = 76/210 (36.19%), Postives = 112/210 (53.33%), Query Frame = 1 
Query:  373 LTSARPVKAIDPIKKTQ-------EAYRIWRQEEADNILGGGELASPEGGKTLQPVLA--LIPIITLRLRLDMVETSLKDPRRFREGLDILQSQDFQKKDIKRVFNAYSDNIYYLPDSERENKYLQGGATPSSRQTLQYLLRNDVIDNVEALAAEIAYLIREREESEAEGLGSPYDSDEKDLRMYLDKCKSGFDRYLGMVLQNEIDEATE 975
            L +  PV A D I K+           RIW Q+E DN++ GGELA   G   ++   A  L+PI+ +    D +E  L   +       IL    ++K   K++FNA++DNIYY  D +R N YL GGA+P + Q++ YL RN+++ N+EAL AE+ YL++E  + E          D KDL  Y+ K K    +YL +V   E+  AT+
Sbjct:  121 LANTSPVLAKDEIYKSNPLTNSVLNQIRIWEQDEKDNLVYGGELAP--GAPPVKDAYAQLLVPILQMAQDFDRMEELLVSGKWLEAKESILDKSCYEKIAFKKIFNAFADNIYYT-DPDRANVYLGGGASPKAVQSIAYLYRNEILTNLEALQAEVTYLLKEESKGE----------DTKDLFTYMSKAKQTMLKYLELVPPAEMKAATK 317
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4264.10901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLI5_ECTSI2.380e-9871.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J809_9PHAE1.010e-9665.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZF78_9STRA3.680e-3747.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2IB95_9STRA2.870e-3037.07Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1Z5KPH8_FISSO4.400e-3042.19Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B5Y3I0_PHATC1.110e-2941.67Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7R9WN96_9STRA6.310e-2937.10Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A6U3RMQ4_9STRA4.360e-2832.93Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3Q034_9STRA8.560e-2837.93Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2RVH1_9STRA9.500e-2736.19Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4264contigH-paniculata_contig4264:5991..10141 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.9
Seed ortholog evalue8.9e-80
Seed eggNOG ortholog2880.D8LLI5
Hectar predicted targeting categorychloroplast
EggNOG OGs2E2DA@1,2S9M9@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-22_001090.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1237
Cds size975
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4264.10901.1prot_H-paniculata_contig4264.10901.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4264 6214..10102 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930296.7477932-UTR-H-paniculata_contig4264:5990..62131622930296.7477932-UTR-H-paniculata_contig4264:5990..6213Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4264 5991..6213 -
1691481230.2499418-UTR-H-paniculata_contig4264:5990..62131691481230.2499418-UTR-H-paniculata_contig4264:5990..6213Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4264 5991..6213 -
1622930296.8130395-UTR-H-paniculata_contig4264:10102..101411622930296.8130395-UTR-H-paniculata_contig4264:10102..10141Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4264 10103..10141 -
1691481230.289895-UTR-H-paniculata_contig4264:10102..101411691481230.289895-UTR-H-paniculata_contig4264:10102..10141Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4264 10103..10141 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930296.7644691-CDS-H-paniculata_contig4264:6213..65371622930296.7644691-CDS-H-paniculata_contig4264:6213..6537Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4264 6214..6537 -
1691481230.2653358-CDS-H-paniculata_contig4264:6213..65371691481230.2653358-CDS-H-paniculata_contig4264:6213..6537Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4264 6214..6537 -
1622930296.77716-CDS-H-paniculata_contig4264:9214..93621622930296.77716-CDS-H-paniculata_contig4264:9214..9362Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4264 9215..9362 -
1691481230.2732635-CDS-H-paniculata_contig4264:9214..93621691481230.2732635-CDS-H-paniculata_contig4264:9214..9362Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4264 9215..9362 -
1622930296.7910948-CDS-H-paniculata_contig4264:9599..101021622930296.7910948-CDS-H-paniculata_contig4264:9599..10102Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4264 9600..10102 -
1691481230.281164-CDS-H-paniculata_contig4264:9599..101021691481230.281164-CDS-H-paniculata_contig4264:9599..10102Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4264 9600..10102 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4264.10901.1

>prot_H-paniculata_contig4264.10901.1 ID=prot_H-paniculata_contig4264.10901.1|Name=mRNA_H-paniculata_contig4264.10901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=325bp
MHKRSCTLILHATAWTITATVVEAFHTSLSYLSRHKSLNRHHRIASTTSL
PVQVHPSKPGKRRTRSFHHTTPDDVTYSNEHVESRAQDAISFPNAVTRDK
AIGIALSAMVALTSARPVKAIDPIKKTQEAYRIWRQEEADNILGGGELAS
PEGGKTLQPVLALIPIITLRLRLDMVETSLKDPRRFREGLDILQSQDFQK
KDIKRVFNAYSDNIYYLPDSERENKYLQGGATPSSRQTLQYLLRNDVIDN
VEALAAEIAYLIREREESEAEGLGSPYDSDEKDLRMYLDKCKSGFDRYLG
MVLQNEIDEATEYAKMALARTKSK*
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mRNA from alignment at H-paniculata_contig4264:5991..10141-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4264.10901.1 ID=mRNA_H-paniculata_contig4264.10901.1|Name=mRNA_H-paniculata_contig4264.10901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4151bp|location=Sequence derived from alignment at H-paniculata_contig4264:5991..10141- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGAGATCTACGCATACGACGATATCTGACTTTGACAGCATGCACAAGCG
AAGCTGTACCCTGATACTGCACGCTACTGCATGGACCATCACTGCAACGG
TAGTAGAGGCTTTCCATACATCACTATCGTATCTCAGTCGGCATAAGTCT
CTCAATAGACATCATAGAATAGCATCAACCACCTCACTGCCTGTACAGGT
ACACCCATCCAAGCCAGGGAAACGACGGACCAGGTCATTCCATCACACCA
CTCCCGATGATGTCACATATTCCAACGAACATGTCGAATCTCGAGCTCAA
GACGCCATCTCGTTCCCCAACGCGGTAACAAGAGATAAAGCGATTGGGAT
TGCTCTGTCGGCGATGGTGGCATTGACCTCAGCTAGGCCCGTCAAAGCTA
TCGACCCCATAAAGAAAACGCAGGAGGCCTATCGAATATGGAGGCAAGAG
GAAGCCGACAATATCCTAGGTGGAGGCGAGCTCGCCTCGCCAGAGGGAGG
CAAGACGCTGCAGCCGGTTCTAGCCTTGATCCCGATTATAACGTGAGTGT
TGGTCCTACAATTGACGGACGGTGGACGCGAATAGGACAGCTCTACAGCA
AACGATCTTGGACCAATAGGATGGTTGTTGCTGTGCTTGCCGTACTCCGC
ACTTTTCATGCGACACTTTCGTCGGCAATCCTCCTGCAGTGTATTGTGCC
ACTAACTGCGTATCGTTACAGGCTCGTATGTACCGTTACACCTGCTACAC
CAAACGCTCCCCGTCTTGTTGCTGGTCAGATTGCGATTGCGGCTAGACAT
GGTGGAGACGAGCCTCAAGGATCCTAGAAGATTTAGAGAGGGGCTTGACA
TCTTGCAATCGCAAGACTTTCAAAAGAAGGATATCAAGCGTGTCTTCAAC
GCGTACAGCGACAACATCTACTATTTGGTGAGTTCGACAAATACTCCTCT
GGGATATTATGTGTTGATGGCCAAGCGTGGGAAATTCTCGTGTCAGACAG
CCACTACAGTAGTAGCAGTAGCAGGGCTTATGTCAACTACTGGCTGGACG
CAGTAACAGGCACACTACCTTTGACGTGCGGTTCTCGTTCCAATTTGGGG
AGTTGTGACCTGAACATTTGAGGAGATAAGTCTATCGTTGATCGGATGAA
GCATTGACAGGTATCGGTTTTTCTTCTGCTCTCCGTTCCAATTAAAGGCA
GTTTCATGTTTTGGCGGTTAAAAATTGTGCATATCTCCCGAACAAGAAAC
GTAGTATACATATATCACGAGTCAGACGTTTTTTTGTTTTTTTACACGTT
TTACCGTTGGTGAAAAAAAATGGCCACAGTACCAGTCATAGTATCGAAAC
CAATAAAAGGCGATAGTAAACACACCATCGATCAAGGCTTCTGTGTTAAC
GATGCTCTCATCTCAACATTTCAAGTTAAAGCTACCAACGTTGGAACGAT
AAAGAGATGCTGAAGTCACAATTAAGAATTATGTCTATAGTCTATAGTTT
CTTGTTGATGTTGTAGCCATCTTGTTTTGGCCATTGATTATAAACGGCGA
TGAGCTGAGAGTAGAACATGGTACCTCTACCCTCTCCGCTGTGTCAAGAG
GACCCTAATAAAATCCAAGATAATCGGACTGTTGAGAACTGTCCACTACC
TATTCCATCTGTTTACCTTGTACGGTCGTTCGGATTCACCTATGTGAGTT
ATGGCAATGTGGAAAAACAAAGATGACGCAGTACCAATTAGGTACACTTT
GGTGGAGCTGTTGATCGGCCTCACCGGATCAAATCCATTTTTAACCGATT
TTTCAGTTGAATCAATGATGACCTCGTCGTGGCTGGTAGCAGAAACAAGC
AAAACACAAGCTCCCCCACGTTGCAGCCTGATGACAGAAGAATCAAAGAC
AACCAAACTCTTTTTTATGAGCAAATGGTCCTCAACAGCGATCTATTGAA
GACTCAATGTAGAGTAACTCGAGTGGTAGGGGTCATTCGTAATTCCCCCA
ACTTCAAAGCAATCTCAGAGCAACTCTTCGTCAACGAATTATTTTCTCAA
TCTCCATCACCTGGCTTTTCTTGGATATTGTTCAAATATCCTCGCCCATG
TTATGGTCATTCAGCTTGTATGATACCCAGTGCTCGAGTTATTTTACCCC
ACCTTACTGCAATTGTGATATCCCGTGGAACACTATTTACTCCATGGTTA
ATTACAGGAACTCAGTATCTCGTAAACCTTGAAGTGTTCACCCCGTGGCA
ATTTACTGCAACTCGCTACCCCGTGAAACTGAAACTCGTTTTCAGAGCAT
TTGTTCAACGTACGTACACCTATGCTACTTTTTACGTACACGTCGACCGC
ACTCTCATCTACTAACAGCCTTTCTTACTGTTCGTTTATAGATCAGTGTA
TTTCTCCATATCAGAGACCCGAAGATCTGCTCATCATTTATCCACAAAGG
TGCATCTCTCTATCCTCCAGAGTTTTAGTCACGTCGTCAACGCGATAATT
ATACCTGACAGTATGGATATATATCAATCATAAAAAACGCGGATATATAT
TCAGTATTCCAAGGGGTCACGGCTTGAACTACACCCCAATAAGTGTAAGA
AGGGCATTTTGGGGGGGGGGGGTAGGGGATGTACTATGTTATTTTCTACC
CCTTGGCGGGATATTAGTTTTTATCCAGTGTAGAAAAAGAAAAATATCGT
ATTGAGCCTCCGGGGTAGATTTGGAGGGGTGGCAGTAGTACGGCGTGGAC
GGGAAAGTATAGCAGTAGCTTTCCTACGGGGCAAAGTATTCCGCAATAGG
AGCTATAGTACCCAAAGCAAACCCTGCCAAATTTCGGTGGACATCGCCAC
GCTGATGGACCGAGCGTAGGTTTATTTGTTGGTGTGGAAAGAAGCTTGAA
GATTTTGGCGGCAACTATGCAAATAACACCAAGTGATGTTTTGCAGCAGA
ACACGCCGTGCTGGAGATTCTCCTTGCAATCCGATCTATATTAACTGTCT
GAAATAGCGAGCGGATTAGCATCCATGCACGCTTGCCAGAATCTCGTTTT
TATTCCTCTAGTCGATCTACGGGTTTGCGCAGTCAAACGATGTATCGCAT
GAAGTAAGCATATACGCCGGTCGGAATCTATGCGAGACGAATACATTATG
TCGGACAAGGTAGTGCCGCAGCATTGATTGCAACTTTGCGCTGTTGCAAG
TTCTACACGTATGCAGCAGCACCTGCGTCGCGTATAAAAAGGTCCACAGG
TCACCTATACGACGCAGCAAAAAGTGCACGAACAGAATTGCGATAAGGAG
CGAAAAAAGTGGGTTGCTTCAAGCCCTGCCTTCTGTGTGACCCGTCGAGT
ATTCTTGAATTTTGTTCTGCATGATTTCCTGTAGTTGTATTGATGTCGTA
TTTCGGAATGCTTTAGTAACCCTATGCTCGAGAGCTCCGGTATCAGCTAT
CTATTTCGGTTCGAATAAACCAATGCCGTTCACTATCAGATCAAAACACT
TCACCATTCACCACACACTTTGTAATTCAATTTGACGTTCGCCCCTATGT
TCTCTCCTGCGTGTTCCTTTGATCAATTTTGTCTTCACACCCAAACGCGA
TCAGCCTGACTCGGAGAGGGAAAACAAATATTTACAGGGTGGTGCAACTC
CTTCCAGCAGACAGACCTTGCAGTACCTCCTTCGGAATGACGTGATCGAC
AACGTCGAGGCGTTGGCGGCGGAAATTGCTTACCTTATTCGAGAGCGAGA
AGAGTCTGAAGCCGAAGGGCTAGGTAGTCCCTACGACAGCGACGAGAAGG
ATCTGCGAATGTACCTAGACAAGTGCAAGAGTGGTTTTGACCGCTATTTG
GGAATGGTGTTACAAAACGAGATTGACGAAGCCACAGAGTACGCGAAGAT
GGCCTTGGCCAGGACCAAATCAAAATGAGCACAGCAACGTGCATACAGCC
AGTGGAACAAGGTTGATATTGAGTAAAGGTTCGGTGAATTAGATAGTTTA
GGTATCGGTTTTAACCCGCAGTATGTGTTATTGCATCAGGAGCATGCATA
GATAGACGGGGTCGTTTGGTGTGTATACTGTAATTCCAGGAATTGAGAAT
TCGCCCTTGGGTGGCATCTATACATCATCACCGAAAGAAAATTCGAGACG
A
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Coding sequence (CDS) from alignment at H-paniculata_contig4264:5991..10141-

>mRNA_H-paniculata_contig4264.10901.1 ID=mRNA_H-paniculata_contig4264.10901.1|Name=mRNA_H-paniculata_contig4264.10901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1950bp|location=Sequence derived from alignment at H-paniculata_contig4264:5991..10141- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCACAAGCGAAGCTGTACCCTGATACTGCACGCTACTGCATGGACCAT
CACTGCAACGGTAGTAGAGGCTTTCCATACATCACTATCGTATCTCAGTC
GGCATAAGTCTCTCAATAGACATCATAGAATAGCATCAACCACCTCACTG
CCTGTACAGGTACACCCATCCAAGCCAGGGAAACGACGGACCAGGTCATT
CCATCACACCACTCCCGATGATGTCACATATTCCAACGAACATGTCGAAT
CTCGAGCTCAAGACGCCATCTCGTTCCCCAACGCGGTAACAAGAGATAAA
GCGATTGGGATTGCTCTGTCGGCGATGGTGGCATTGACCTCAGCTAGGCC
CGTCAAAGCTATCGACCCCATAAAGAAAACGCAGGAGGCCTATCGAATAT
GGAGGCAAGAGGAAGCCGACAATATCCTAGGTGGAGGCGAGCTCGCCTCG
CCAGAGGGAGGCAAGACGCTGCAGCCGGTTCTAGCCTTGATCCCGATTAT
AACATGCACAAGCGAAGCTGTACCCTGATACTGCACGCTACTGCATGGAC
CATCACTGCAACGGTAGTAGAGGCTTTCCATACATCACTATCGTATCTCA
GTCGGCATAAGTCTCTCAATAGACATCATAGAATAGCATCAACCACCTCA
CTGCCTGTACAGGTACACCCATCCAAGCCAGGGAAACGACGGACCAGGTC
ATTCCATCACACCACTCCCGATGATGTCACATATTCCAACGAACATGTCG
AATCTCGAGCTCAAGACGCCATCTCGTTCCCCAACGCGGTAACAAGAGAT
AAAGCGATTGGGATTGCTCTGTCGGCGATGGTGGCATTGACCTCAGCTAG
GCCCGTCAAAGCTATCGACCCCATAAAGAAAACGCAGGAGGCCTATCGAA
TATGGAGGCAAGAGGAAGCCGACAATATCCTAGGTGGAGGCGAGCTCGCC
TCGCCAGAGGGAGGCAAGACGCTGCAGCCGGTTCTAGCCTTGATCCCGAT
TATAACATTGCGATTGCGGCTAGACATGGTGGAGACGAGCCTCAAGGATC
CTAGAAGATTTAGAGAGGGGCTTGACATCTTGCAATCGCAAGACTTTCAA
AAGAAGGATATCAAGCGTGTCTTCAACGCGTACAGCGACAACATCTACTA
TTTGATTGCGATTGCGGCTAGACATGGTGGAGACGAGCCTCAAGGATCCT
AGAAGATTTAGAGAGGGGCTTGACATCTTGCAATCGCAAGACTTTCAAAA
GAAGGATATCAAGCGTGTCTTCAACGCGTACAGCGACAACATCTACTATT
TGCCTGACTCGGAGAGGGAAAACAAATATTTACAGGGTGGTGCAACTCCT
TCCAGCAGACAGACCTTGCAGTACCTCCTTCGGAATGACGTGATCGACAA
CGTCGAGGCGTTGGCGGCGGAAATTGCTTACCTTATTCGAGAGCGAGAAG
AGTCTGAAGCCGAAGGGCTAGGTAGTCCCTACGACAGCGACGAGAAGGAT
CTGCGAATGTACCTAGACAAGTGCAAGAGTGGTTTTGACCGCTATTTGGG
AATGGTGTTACAAAACGAGATTGACGAAGCCACAGAGTACGCGAAGATGG
CCTTGGCCAGGACCAAATCAAAATGACCTGACTCGGAGAGGGAAAACAAA
TATTTACAGGGTGGTGCAACTCCTTCCAGCAGACAGACCTTGCAGTACCT
CCTTCGGAATGACGTGATCGACAACGTCGAGGCGTTGGCGGCGGAAATTG
CTTACCTTATTCGAGAGCGAGAAGAGTCTGAAGCCGAAGGGCTAGGTAGT
CCCTACGACAGCGACGAGAAGGATCTGCGAATGTACCTAGACAAGTGCAA
GAGTGGTTTTGACCGCTATTTGGGAATGGTGTTACAAAACGAGATTGACG
AAGCCACAGAGTACGCGAAGATGGCCTTGGCCAGGACCAAATCAAAATGA
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