mRNA_H-paniculata_contig4259.10884.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig4259.10884.1 vs. uniprot
Match: A0A6H5K9B1_9PHAE (Peptidase S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE) HSP 1 Score: 919 bits (2376), Expect = 6.020e-302 Identity = 614/1215 (50.53%), Postives = 732/1215 (60.25%), Query Frame = 1
Query: 238 GGTSFPPTLDMEGYETTPPMSELVAMDENSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVVVIEFKSASVYDELPENEEKPPRGEGLNKSTTVTLLGVFPKGDNPSEEQKRKYEQKVRRNTEKIGAVLVEYSADTGVWVFDTLHWSRYAMDDSXXXXXXXXXXXXXXXXXXXXXXXXXXX--LGPSGRIPRAA---TATRGECSAVRQPRRSTKYSMPDTDDEGSVADNASDAGGITGNMAATAGGRGDGTTQVQAGNVEEDADMADVDYAPPATGGATGESKEEYWAEPRLPTNNLFRSAMDTEQAENLRVAVGHELVDSRGYGGTREAGGGAGYLAGTTLPPERVPILQRSLWEPLVGPRGITPPPVLGDAEDAKAAAAFRPVVSAANSRVLRVLANAWETEDGEL-KDEAARGVVRAGKIVADSGLRRGRGFRASWGPGGKLVLPGTIGGSKAVGGGVRGSLGRHTVHIRQFDPMPTASARDAGELYVETLSNHQQFAQPVDCSSDAAETATDEDVPPRWVLPQRNNRRPENYKALVRCMHGYAAAH------AAIASRGDKDDVSSSPEWVLEQMWRLASAMWGQEEGEGKVQDLPLPGEEPPCGEPDGDIGSFGGSSSGGASPASRREAAVADWLANAVSICVPAVPKGD------------------DPWQNLLELLSVRRVDDAANLAAKSGLPRLAVVLAAVAAVSGQGGVSWPGAHYASNALAKQVKLWQAGGADARMPQEAFVIYQLLGRERFRDVQLRGLIGSKRAGPRHRSLDWLRQLGLCLWFGAGAPSSNDGSDG----------VAEAVEAFESLVADKEALPPTARYLREATHHREEDLENACAELRTHYF----------------REEDSGRDRCVLNRLLALYPPRIAGGXXXASAVVGRTALLAALEPLAVSPDAIDYRHSWHLMTVVEALDVTVVLDRCTAAAVAESLRFQLVIAGLWEWAVYVALSAEEGSGRREATARELVMRYGHGLLAAAAESVDGKRRHLLSVLGIPGAWLYESAAVRAGYDHKAALPAPTGPYQPVPDGVEAELNREAKLGLLVSAGSSRLAPDAARELCQLAPISLYLGRKVGSL-AVNFEEISRRLEMEKHRXXXXXXXXXXXXXXXXXXRTKEFDAYAEMLDIVHRGPVDGDVW----TRDEVDRLRRVRIVAERAAARVVGRAVAHEALST 3699
GG F PTLD+E Y+T P M+EL M ++ L +V+GF VSR GYGSI WKEPVDLR VDIG VV IE KS SVYDEL E EEKP GEGLNK T VTL +FP+G +PS+ +KR+YE +V +NTEKIGA LV Y D G WVF+T HWSRYAM D XXXXXXXXXXXXXXXXXXXXXXXXXXX LG +GR+PR A T+++G+ A + RRSTK +MPDTDDEGSVADNASDAGG + T G AG+ D D D G G + W + + T+ LF D Q E++R ++ +G G + + W L P + PP L + EDAKAAAAFRP SRVLR+LANAWE GE+ D AARG VRAG+ VAD GLR GRGFRASWGP GKL P +A+GGG R G H V + +FDP P+AS RD LYVE L NH A P+ + A VPPRW LP+R N RP+NY LVRC+HGY H A +SR SPEWVLEQ WRLASAMWGQEEGEG+VQDLPLPG+ D+ + G GG SPA+RREAAV DWLA AVS CVP+ G + W+ +LELLSVRRV DAA A +GLPRLAV+L AVA G GG P A Y S LA+Q WQA GADARMPQEAF + QLLGRE FRDV LRGLI G SLDW+RQLGLCLWFGAGA + G DG VA A+EA+++LVAD EAL PTARY E THH L+ C ELR Y + GRDRCVL LLA+YP R AGG ++ V LL+ALEP+AV+PD +DYRHSWHLM VVEAL V V DR AAAV E LRFQLV GLWEWAVYVAL+AE G RR ATARELV+R+G+ +L A S D +R L LGIPGAWL+E+AAVRAGY+HK+A+P+PT P + + KL LL SAGS+ LA +AA+E C +AP S++LG + SL A EI+ +E E + KEF AY E+++ G +RDE+DRL R+ + + +A+RV+G A AH+ + T
Sbjct: 1017 GGNDFAPTLDLEEYKTEPSMAELAKMTKDELAAVSGFVVSRQGYGSIAWKEPVDLRGVDIGSVVAIEHKSVSVYDELAEGEEKPALGEGLNKPTRVTLYNIFPRGADPSDAEKRRYEARVSKNTEKIGAKLVSYDVDIGEWVFETFHWSRYAMSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGRAGRVPRPARGTTSSKGQKRAASEGRRSTKLAMPDTDDEGSVADNASDAGGGAREASNTRSRTGVEGESKMAGSDAAGFDSMDTDTPEVVVDGDDGTA----WPDSQRVTSTLFPER-DPSQMEHMRSSL---------FGQEERRMPRKAADVGASXXXXXXXXXRPLSWARLQ-PEPVARPPALRNPEDAKAAAAFRPAAGGLESRVLRLLANAWEPAAGEVVSDAAARGAVRAGQAVADLGLRMGRGFRASWGPDGKLFCP------RAMGGGARN--GFHGVRVSRFDPTPSASDRDVHRLYVEPLRNHLGSAGPLAEAQAKRHGAAAAAVPPRWALPRRRNDRPQNYDTLVRCIHGYVEVHRLAGAAATSSSREAGAATEDSPEWVLEQSWRLASAMWGQEEGEGRVQDLPLPGDLQRA----ADL-TLAGDCDGG-SPAARREAAVGDWLARAVSSCVPSPSGGPSXXXXXXXXXXXXXDADRETWRRVLELLSVRRVHDAAVAAMAAGLPRLAVMLTAVATQGGGGGR--PPARYGSKFLAQQAAQWQAAGADARMPQEAFSVVQLLGREGFRDVGLRGLISKGPGGSLRPSLDWMRQLGLCLWFGAGASAGIGGEDGDRDGGSGGGVVANAIEAYDTLVADGEALLPTARYFLEPTHHESAHLDKVCTELRRVYMPPPRPPAGLSLEKSGGEDRGYGRDRCVLRCLLAMYPSRKAGGGVGGASGVS---LLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEGGPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLENLGIPGAWLHEAAAVRAGYEHKSAVPSPTYPRESGSAVPAVGSAHDTKLKLLTSAGSAELALEAAKEACMVAPSSMFLGGETLSLLAEKLGEIAWLVE-EGGKQEEIGSLGGEGRKNGGAGVGKEFYAYKEIVEAAVEERAGGAAAALRRSRDEMDRLERMWRIVQPSASRVLGAAAAHQTMET 2196
BLAST of mRNA_H-paniculata_contig4259.10884.1 vs. uniprot
Match: A0A835Z2A3_9STRA (Nuclear protein 96-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2A3_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.150e-39 Identity = 175/597 (29.31%), Postives = 274/597 (45.90%), Query Frame = 1
Query: 1450 ELKDEAARGVVRAGKIVADSGLRRGRGFRASWGPGGKLVLPGTIGGSKAVGGGVRGSLGR-HTVHIRQFDPMPTASARDAGELYVETLSNHQQFAQPVDCSSDAAETATDEDVPPRWVLPQRNNRRPENYKALVRCMHGYAAAHAAIASRGDKDDVSSSPEWVLEQMWRLASAMWGQEEGEGKVQDLPLPGEEPPCGEPDGDIGSFGGSSSGGASPASRREAAVADWLANAVSICVPAVPK--GDDP--WQNLLELLSVRRVDDAANLAAKSGLPRLAVVLAAVAAVSGQGGVSWPGAHYASNALAKQVKLWQAGGA----DARMPQEAFV-IYQLLGRERFRDVQLRGLIGSKRAGPRHRSLDWLRQLGLCLWFGAGAPSSNDGSDGVAEAVEAFESLVADKEALPPTARYLREATHHREEDLENACAELRTHYFREEDSG-RDRCVLNRLLALYPPRIAGGXXXASAVVGRTALLAALEPLAVSPDAIDYRHSWHLMTVVEALDVTVVLDRCTAAAVAESLRFQLVIAGLWEWAVYVALSAEEGSGRREATARELVMRYGHGLLAAAAESVDGKRRHLLSVLGIPGAWLYESAAV 3207
+L + +R A D+ L G FRA WG GKLV+ + + GSL ++ +R+ P+ DA LY L+ H Q A+ + + + V P W L E+ + LV H + + A + G V + P+W + Q WRL +A+WG E+ ++++ P + SF R+ V+ WL++A + C+ A + P +LELLSV ++D AA LAA++GL RL+ VLA +G G NA+ +Q + Q + + AF +LL E + + R G + L+WLR LGLCLW+ G +A A+ + V A P ARY+ + TH ++ L C L + E G R C+L RL+ R+A G + L+PL +PD +DYRH+WHL+TV++A+ VTV + T VA++L QLV +GLW WA YV L+ ++ R + +LV+R+G+ +L +++ + + +L+ L IP WLYES A+
Sbjct: 798 QLSQDMSRKATSA--TTCDAALLLGCSFRAGWGADGKLVV---VTRRRVAAVSDSGSLRTIRSISVRKLTATPSRH-EDAAALYQTALTLHLQHAKCSEAVLPERAVSAEIAVAPSWGLEN------ESAQQLV---HDHISRSAEL---GQARGVPAQPDWAVAQGWRLVNALWGSEK---QLEEGQAPADL-----------SF-----------EHRQRFVSAWLSSATADCLAAAASDGAEKPSTMAQILELLSVHQIDGAAELAAETGLLRLSTVLA----FAGVG-----------NAVVRQEAVEQLAQLLSVDENKYDNTAFTNALRLLSGEELACLSDFAPHAAARDGV--QGLNWLRHLGLCLWYQYGGVE-------LAAALARYAQQVVKGGADAPIARYIVDPTHFSQDQLPRKCDLLEKQFLPEGVGGSRGLCLLYRLM-----RLAVGEDTLQPLY--------LDPLCCTPDVLDYRHAWHLLTVLQAMQVTVCMPG-TVMLVADALVSQLVGSGLWHWAAYVLLNIDDEQVR-SSRVHDLVLRHGYAVLHDMSDA-GLEVKQVLTELRIPVQWLYESTAL 1311
BLAST of mRNA_H-paniculata_contig4259.10884.1 vs. uniprot
Match: A0A7S2R6I5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6I5_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.760e-35 Identity = 276/1013 (27.25%), Postives = 383/1013 (37.81%), Query Frame = 1
Query: 364 GYGSIEWKEPVDLRRVDIGLVVVIE----FKSASVYDELPENE-EKPPRGEGLNKSTTVTLLGVFPKGDNPSEEQKRKYEQKVRRNTEKIGAVLVEYSADTGVWVFDTLHWSRYAMDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPSGRIPRAATATRGECSAVRQPRRSTKYSMPDTDDEGSVADNASDAGGITGNMAATAGGRGDGTTQVQAGNVEEDADMADVDYAPPATGGATGESKEEYWAEPRLPTNNLFRSAMDTEQAENLRVAVGHELVDSRGYGGTREAGGGAGY------LAGTTLPP--ERVPILQRSLWEPLVGPRGITPPPVLGDAEDAKAAAAFRPVVSAANSRVLRVLANAWETEDGELKDEAARGVVRAGKIVADSGLRRGRGFRASWGPGGKLVLP---------GTIGGSKAVGGGVRGSLGRHTVHIRQFDPMPTASARDAGELYVETLSNHQQFAQPVDCSSDAAETATD--EDVPPRWVLPQ--RNNRR--PENYKALVRCMHGYAAAHAAIASRGDKDDVSSSPEWVLEQMWRLASAMWGQEEGEGKVQDLP-----LPG-------------EEPPCGEPDGDIGSFGGSSSGGASPASRREAAVADWLANAV---SICVPAVPKGDDP-WQNLLELLSVRRVDDAANLAAKSGLPRLAVVLAAVAAVS----GQGGVSWPGAHYASNALA-KQVKLWQAGGADARMPQEAFVIYQLLGRE-RFRDVQLRGLIGSKRAGPRH-----RSLDWLRQLGLCLWFGAGAPSSNDGSDGVAEAVEAFESLVADKEALPPTARYLREATHHREEDLENACAELRTHYFREEDSGRDRCVLNRLLALYPPRIAGGXXXASAVVGRTALLAALEPLAVSPDAIDYRHSWHLMTVVEALDVTVVLDRCTAAAVAESLRFQLVIAGLWEWAVYVALSAEEGSGRREATARELVMRYGHGLLAAAAESVDGKRRHLLSVLGIPGAWLYESAAVRAGY 3219
G G I W D+ V + V IE + ASVYD+L ++ KPP G+ LNK +TL VFPK SE +K+ Y K+ +K GA + Y GVW F H+S Y + +S A T+ + RR M ++D G + DG T + G E+ +A AP A GA P P + + + L +A RG A G AGT + P +P L + EP++ P P K A ++A++ + + G + G A ++ D GL GR FRAS+GP G+L+LP T+G + + L H V I + P A DA Y L+ H +F + +A E E PR+ LP R +R P Y LV +H A A ++ EW + QMWRLA A+WGQE+ V L LPG E C +G P+ RR A ++ WLA+ V + PA G P + + LS RV DA A +G RLA +LA A S G GGV S LA +Q+ W A D + + ++Y LL + + D G + S P +LDW R LGL LWF S + +AF + +A PP Y A H E E + S R CVL RLL LY G V ++ AL P A + D +DYRH+W L+T++EA++ L TAA V +S QL+ GLW W+VY + R A R V+R+G A + L LG+P AWL+E+ A G+
Sbjct: 1 GAGEIRWLGLTDVSFVSLDDHVHIENDGKVRLASVYDDLDDDPARKPPVGDKLNKPAEITLYDVFPKAT-ASEAKKKAYPHKLETQNDKDGATFIAYDPRKGVWKFRVEHFSPYGIVESDSEDEEDAYEDEEDSVV-------------------AMEETKAD-------RRRRGLGMVESDXXXXXXXXXXXXXGENARPS-------DGATMDEDG--EDGTGVAAAAAAPGAWRGARDPFS------PLQPAAAVGTPQLRRSGRKALSLAARLPAAAQRGALAAATATGADPMDQEDPEEAGTAIVPAESELPALA-TFQEPVL------PTPXXXXXXXXKLARVPVYYPASADASFTQRMFERARARIGAQAPLSGAGQASASRMSLDLGLSMGRSFRASFGPQGQLILPFLAPRGSTRRTVGATPSEAAAAMTGLA-HAVTIERV--APRAQVADA---YTPLLAEHHRFRVRAGEADEAEEEGPSGAEARVPRFHLPTGFRPDRTMDPTAYPKLVDFLHRCAELTEGHALSWHEE------EWPVAQMWRLAGALWGQEQRTVVVPRLEAGAAALPGAGAAPLPVYDHARERQDC-------------RNGLHRPSDRRAALLSRWLAHCVRGRAQEAPAPVAGAAPAFLEIFGSLSEGRVPDAVVSAISAGEVRLAGMLACHGASSAGTRGPGGVGAGDEETQSAVLAAEQLAKWLAEQHDDFVDKGLQLVYSLLTDDLQHLDPDQVGHLESGVLSPEDCRSTAAALDWQRGLGLRLWFEQAPGESLQFP--FQQYTDAFRTC----KAAPPLPAY---AARHWHEAPEFSA------------SPRHLCVLYRLLELY----CLGEEDCRPV---DVVVQALMPQAATADPLDYRHAWQLLTLLEAVNFYERLPEDTAAMVIDSFASQLIAVGLWTWSVYAYAHLRDPRLRSHAI-RSTVLRHGPDATPAEMD--------FLQDLGVPVAWLHEARAYARGH 902
BLAST of mRNA_H-paniculata_contig4259.10884.1 vs. uniprot
Match: A0A8C2XBX6_CYCLU (Nuclear pore complex protein Nup98-Nup96 n=8 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C2XBX6_CYCLU) HSP 1 Score: 153 bits (386), Expect = 1.230e-33 Identity = 265/1032 (25.68%), Postives = 382/1032 (37.02%), Query Frame = 1
Query: 262 LDMEGYETTPPMSELVAM-DENSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVVVIEFKSASVYDELPENEEKPPRGEGLNKSTTVTLLGVFPKGD-------NPSEEQKRKYEQKVRRNTEKIGAVLVEYSADTGVWVFDTLHWSRYAMDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPSGRIPRAATATRGECSAVRQPRRSTKYSMPDTDDEGSVADNASDAGGITGNMAATAGGRGDGTTQVQAGNVEEDADMADVDYAPPATGGATGESKEEYWAEPRLPTN--------NLFRSAMDTEQAEN---------LRVAVGHELVDSRG------YGGTREAGGGAGYLAGTTLPPERVPILQRSLWEPLVGPRGITPPPVLGDAEDAKAAAAFRPVVSAANSRVLRVLANAWETEDGELKDEAARGVVRAGKIVADSGLRRGRGFRASWGPGGKLVLPGTIGGSKAVGGGVRGSLGRHTVHIRQFDPMPTASARDAGELYVETLSNHQQFAQPVDCSSDAAETATDEDVPPRWVLPQRNNRRPENYKALVRCMHGYAAAHAAI-------ASRGDKDDVSSSPEWVLEQMWRLASAMWGQEEGEGKVQDLPLPGEEPPCGEPDGDIGSFGGSSSGGASPASRREAAVADWL----ANAVSICVPAVPKGDDPWQNLLELLSVRRVDDAANLAAKSGLPRLAVVLAAVAAVSGQGGVSWPGAHYASNALAKQVKLWQAGGADARMPQEAFVIYQLL-GRERFRDVQLRGLIGSKRAGPRHRSLDWLRQLGLCLWFGAGAPSSNDGSDGVAEAVEAFE-SLVADKEALPPTARYLR-EATHHREEDLENACAELRTHYFREEDSGRDRCVLNRLLALYPPRIAGGXXXASAVVGRTALLAALEPLAVSPDAIDYRHSWHLMTVVEALDVTVVLDRCTAAAVAESLRFQLVIAGLWEWAVYVALSAEEGSGRREATARELVMRYGHGLLAAAAESVDGKRRHLLSVLGIPGAWLYESAAVRAGYD 3222
L+ GY T P + +L M DEN V F V R GYGSI + V + ++I +V K VY P+++ KP GEGLN+ VTL GV+P +P + YE ++ + + K GA +EY A+TG WVF+ H+S+Y + DS L PS + A + + AV P G VA+ SD IT + T + G ++D D+D+ GG + A R+ ++ + ++++ E E ++V V + G GG +A +G + + P P+ + S GP PP P +S V R+ LK+ G G ++ D+GL GR FR WGPG L G GS A R T+ F P P S Y L PV + A + + + + LVR G AA H RGD D + ++W L A+WG+ G ++ P EPP G R + WL A V V KG + L+ RV +A LA K G RL+++L+ A G+ Y + LA Q+ W D+ +P+E I+ LL G+ ++ + S+ LDW R + + LWF P + +D +A AF+ S K A P YL E EE+ E A ++ H D C LL LY R +L L+PLAV+ +DYR SWHL V++AL L + S QL AGLW AV++ L + + R A L + H L ES+ + R L L IP WL+E+ A RA D
Sbjct: 740 LNRVGYYTIPSLDDLSEMVDENGACVVDNFTVGRKGYGSIFFPGEVSVTALNIDEIVHFRRKEVIVY---PDDKNKPLEGEGLNRRAEVTLDGVWPNDKTACTQIRSPERLTEMNYEGRLEKASRKQGARFLEYRAETGSWVFEVAHFSKYGLQDSDEEEDVPLKADPKKLKTMSSLPARLQ-LPPS----QQQVAPQAQPDAVELP--------------GGVAELDSDMADITQSFP---------TESMLGGGDDDDLPACDLDWTNGKLGGLIPAENDGVSASGRMASSLGINPHTLQIMKASLFAEDEEESDMIQDQRVMKVDVSSPRIVVPGAQSRPSVGGLLQARFTSGLFSQLSDSPRPPPLPRGS-----PGPPSFLLPP-------------RTPELSVRTVGVRRLGGPV------ALKESVTMG---KGGLLMDAGLFAGRSFRVGWGPGWTLAHCGQRLGSPAA---KRPDRHERTITDFSFLPKPARSKPLIESPYKVVLEQLAGLDPPVKTGEEQQSQAVLQRPLEICLKHCTVDTSDASACPLVRPQPGVAALHEYAEWIVELSGERGDADPLLG----YWSEVWTLCEALWGRM-GPAHLE----PDAEPP----------------GAYEQQLERRRTFSAWLSRGAARRVEEEVALATKGRHA-DAVFSYLTGNRVSEACRLAQKEGDHRLSLLLSQAA-----------GSQYCRDLLALQLTDWNRMQTDSYLPEERLRIFTLLSGKPVWQSSDSVVNVCSE--------LDWKRCVAVHLWFML--PPTASVADALARYEAAFQGSCEGGKYACAPLPAYLEAEQADMMEEEEEEAESKRPLH---------DLCF--HLLKLYSDR-------------HYSLQQLLDPLAVTWQRLDYRLSWHLWGVLQALHYGH-LSAARQGLLHTSYAAQLESAGLWHMAVFILLHIADHTQRERAVREMLTL---HCRLQETDESLR-RERFLTERLLIPDQWLHEAKATRARRD 1634
BLAST of mRNA_H-paniculata_contig4259.10884.1 vs. uniprot
Match: UPI00094EEFB5 (nuclear pore complex protein Nup98-Nup96 isoform X1 n=4 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094EEFB5) HSP 1 Score: 147 bits (372), Expect = 5.560e-32 Identity = 267/1041 (25.65%), Postives = 397/1041 (38.14%), Query Frame = 1
Query: 274 GYETTPPMSELVAM-DENSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVVVIEFKSASVYDELPENEEKPPRGEGLNKSTTVTLLGVFPKGD-------NPSEEQKRKYEQKVRRNTEKIGAVLVEYSADTGVWVFDTLHWSRYAMDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPSGRIPRAATATRGECSAVRQPRRSTKYSMPDTDDEGSVADNASDAGGITGNMAATAGGRGDGTTQVQAGNVEEDADMADVDYAPPATGGATGESKEEYWAEPRLPTN-------------NLFRSAMDTEQ--AENLRVAVGHELVDSRGYGGTR-EAGGGAGYLAGTTLPPERVPILQRSL-WEPLVGPRGITPPPVLGDAEDAKAAAAFRPVVSAANSRVLRVLANAWETEDGELKDEAARGVVRAGKIVADSGLRRGRGFRASWGPGGKLVLPGTIGGSKAVGGGVRGSLGRHTVHIRQFDPMPTAS-----ARDAGELYVETL------SNHQQFA---QPVDCSSDAAETATDEDVPPRWVLPQRNNRRPENYKALVRCMHGYAAAHAAIASRGDKDDVSSSPEWVLE---QMWRLASAMWGQEEGEGKVQDLPLPGEEPPCGEPDGDIGSFGGSSSGGASPASRREAAVADWL----ANAVSICVPAVPKGDDPWQNLLELLSVRRVDDAANLAAKSGLPRLAVVLAAVAAVSGQGGVSWPGAHYASNALAKQVKLWQAGGADARMPQEAFVIYQLLGRERFRDVQLRGLIGSKRAGPRHRSLDWLRQLGLCLWFGAGAPSSNDGSDGVAEAVEAFE-SLVADKEALPPTARYLREATHHREEDLENACAELRTHYFREEDSGR---DRCVLNRLLALYPPRIAGGXXXASAVVGRTALLAALEPLAVSPDAIDYRHSWHLMTVVEALDVTVVLDRCTAAAVAESLRFQLVIAGLWEWAVYVALSAEEGSGRREATARELVMRYGHGLLAAAAESVDGKRRHLLSVLGIPGAWLYESAAVRA---GYDHKAAL 3237
GY T P M EL M D++ V F V R GYGSI + V++ +D+ +V K VY P+++ KP GEGLN+ VTL GV+P +P YE ++ + K GA +EY A+TG WVF+ H+S+Y + +S L PS R P +VAD AS+ + +MA D T A N E+DA+ A +P G A G ++ A R+ ++ +LF D E+++++ H ++ G G +A +G L+ P P RS W P + PP +P + +R L E+ + + G ++ D+GL GR FR WGPG L G S G+R LGR F +P + A ++ +E L S Q A +P+D + + +T++ P V P+ V +H YA + ++ + D+ VL ++W L A+WGQ P EP G G R A + WL A V V KG + + L+ R+ +A LA K G RLA++L+ A G+ Y LA Q+ W D + +E I+ LL + S+ LDW R + + LWF P + +D +AE +AF+ S K A P YL+E ++ R +E+S R D C LL LY R G L LEPL+V+ + +D+R SWHL V++AL + L + S QL AGLW AV++ L + + R A L + H L ES+ + R L L +P W++E+ +VRA G H+ AL
Sbjct: 762 GYYTIPSMDELSDMVDDSGECVVDNFTVGRKGYGSIFFPGTVNVTGLDLDQIVHFRRKEVIVY---PDDKNKPAEGEGLNRRAEVTLDGVWPNDKTTCTQIRSPERLADMNYEGRLEKAARKQGARFLEYRAETGSWVFEVAHFSKYGLQESDEDDDLPLKTDPKKLKMMTS-------LPPS-----------------RPXXXXXXXQQPMQAQTPAVADPASNVAELDSDMA-------DVTQSFSAEN-EDDAEPA---ISP---GDAAGAEQDGVSASGRMASSLGVNPHALQIMKASLFAEDEDESDFFQEHVKISSPHLVLPGPGSAGALFQARFSSGLLSSLPDSPPLRPEAPRSFPWVPPAVSSFLLPP---------------KPAEPPVRTVGVRRLGGPVPLEESVTQGK--------GNLLMDAGLYAGRSFRVGWGPGWTLAHCGDRPNSPP---GLR--LGRRGSTDADFGFLPKPARNKPLAESPYKVLLERLVALPETSEEQGQAVLQRPLDICLEHSTVSTEDSGCP-LVRPEPG----------VAALHDYADWISELSDEREHADLLCVSSAVLAYWCEVWTLCEALWGQR----------------PHAEPLGHYERQMG-----------RRRAFSAWLSRRAARRVEEEVAQAGKGRRA-EAVFSYLTGNRISEACRLAQKEGDHRLALLLSQAA-----------GSQYGRELLALQLADWNRTQTDGYLTEERLRIFMLLAGKPVWQT-------SESVVNACSQLDWKRCVAVHLWFML--PPTASVADALAEYQDAFQGSCEGGKYACAPLPPYLKEE--------QSGMGMDRRDQDEDEESKRPLYDVCF--HLLKLYSDRHYG-------------LQQLLEPLSVTWERLDFRLSWHLWGVLQALHYSH-LSAARQGLLHASYAAQLESAGLWHLAVFILLHIPDHTQRERAVRAVLSL---HCPLQETEESLS-RERFLTRRLLVPERWIHEAKSVRARHCGDKHREAL 1646
BLAST of mRNA_H-paniculata_contig4259.10884.1 vs. uniprot
Match: UPI001A982BB0 (nuclear pore complex protein Nup98-Nup96 isoform X1 n=4 Tax=Gasterosteus aculeatus aculeatus TaxID=481459 RepID=UPI001A982BB0) HSP 1 Score: 147 bits (372), Expect = 5.610e-32 Identity = 279/1058 (26.37%), Postives = 385/1058 (36.39%), Query Frame = 1
Query: 262 LDMEGYETTPPMSELVAM-DENSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVVVIEFKSASVYDELPENEEKPPRGEGLNKSTTVTLLGVFPKGDN-------PSEEQKRKYEQKVRRNTEKIGAVLVEYSADTGVWVFDTLHWSRYAMDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPSGRIPRAATATRGECSAVRQPRRSTKYSMPDTDDEGSVADNASDAGGIT----------------GNMAATAG---GRG-DGTTQVQAGNVEEDADMADVDYAPPAT-----------GGATGESKEEYWAEPRLPTNNLFRSAMDTEQAENLRVAVGHELVDSRGYGGTREAGGGAGYLAGTTLPPERVPIL--------QRSLWEPLVGPRGITPPPVLGDAEDAKAAAAFRPVVSAANSRVLRVLANAWETEDGELKDEAARGVVRAGKIVADSGLRRGRGFRASWGPGGKLVLPGTIGGSKAVGGGVRGSLGRHTVHIRQFDPMPTASARDAGELYVETLSNHQQFAQPVDCSSDAAETATDEDVPPRWVLPQRN----------NRRPENYKALVRCMHGYAAAHAAI-------ASRGDKDDVSSSPEWVLEQMWRLASAMWGQEEGEGKVQDLPLPGEEPPCGEPDGDIGSFGGSSSGGASPASRREAAVADWLANAVSICVPA----VPKGDDPWQNLLELLSVRRVDDAANLAAKSGLPRLAVVLAAVAAVSGQGGVSWPGAHYASNALAKQVKLWQAGGADARMPQEAFVIYQLL-GRERFRDVQLRGLIGSKRAGPRHRSLDWLRQLGLCLWFGAGAPSSNDGSDGVAEAVEAFE-SLVADKEALPPTARYLR-EATHHREEDLENACAELRTHYFREEDSGRDRCVLNRLLALYPPRIAGGXXXASAVVGRTALLAALEPLAVSPDAIDYRHSWHLMTVVEALDVTVVLDRCTAAAVAESLRFQLVIAGLWEWAVYVALSAEEGSGRREATARELVMRYGHGLLAAAAESVDGKRRHLLSVLGIPGAWLYESAAVRAGYD 3222
L+ GY T PPM +L M DEN V F V R GYGSI + V++ +++ VV K VY P+++ KP GEGLN+ VTL GV+P P + YE ++ + + K GA +EY A+TG WVF+ H+S+Y + DS P R+P + + A Q + +P G VA+ SD IT G + A G GR G V+ V MA P T G++ E W PT S R +V RG R + G L + PP P L + S W L GP PP A PV + R+ +A LK+ G G ++ D+ L GR FR WGPG L G S+A G R L T F P P S R Y L P+ S +E+ W + QR N + LVR G AA H A G+ D + +W ++W L A+WG+ D P PG E P G R + + WL+ + V A KG + L+ R+ +A LA + G RL+++L+ A G+ Y + L Q+ W D+ +P+E I+ LL G+ ++ + S+ LDW R L + LWF P + +D +A AF+ S K A PP YL E EE+ E +L H LL LY R +L L+PL V+ +DYR SWHL V++AL + L + S QL AGLW AV++ L + R A L + H L ES+ + R L L IP WL+E+ A RA D
Sbjct: 752 LNRVGYYTLPPMEDLADMVDENGDCVVENFTVGRKGYGSIFFPGEVNVAALNLDEVVHFRRKEVIVY---PDDKNKPLEGEGLNRRAEVTLDGVWPNDKTACTQIRCPDRLTEMNYEGRLEKASRKQGARFLEYRAETGSWVFEVAHFSKYGLQDSDEEDDVPLNADPKKLKTMSL---------PPARLPPPS-----QQQAAPQAQSPVVVEIP-----GGVAELDSDMADITQSFPTESMLGDEDDCNGVLLARGGDWTGRKLGGLVPVEHDGVSSSGHMASSLGINPHTLQIMKASLFAEDDDEGDAPREQW-----PTTAEVSSPRLVVPGTQTRPSV-------RGLLQARFSSGLLSQLTDSPRPPLLPPPLAWGSPASKEPSHWAGL-GPSSFLLPP----------RAPEPPVRTVGVRRLGGPVA---------LKESVTLG---KGALLMDAALFAGRSFRVGWGPGWTLAHCGQQLSSQADGPPGRRGL---TKTDFSFLPKPARSKRLTESSYKVVLEQLVGLEPPLTSSE------VEEEEEESWAVLQRPLEICLRNSTVNAADHSACPLVRPRLGVAALHEYAEWIRELSARHGEADALLG--QWA--EVWTLCEALWGRL----GASDDPEPGTEAP----------------GDYEQQLERRRSFSAWLSRGAARRVEAEAALAGKGRHT-DAVFSYLTGNRISEACRLAQREGDHRLSLLLSQAA-----------GSQYCRDLLGLQLADWSRMQTDSYLPEERLRIFTLLSGKPVWQSSDSVVNVCSE--------LDWKRCLAVHLWFML--PPTASVADALARYEAAFQGSPDGGKYACPPQPPYLEAEQPDMMEEEPERPLHDLCFH----------------LLKLYSDR-------------HYSLQQLLDPLTVTWQRLDYRLSWHLWGVLQALHYSH-LSASRQGLLHASYAAQLESAGLWHMAVFILLHIPDHIQRERAVRAMLTL---HCCLQETPESLR-RERFLTEKLLIPDQWLHEAKATRARRD 1663
BLAST of mRNA_H-paniculata_contig4259.10884.1 vs. uniprot
Match: UPI0009B43E98 (LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96 n=1 Tax=Monopterus albus TaxID=43700 RepID=UPI0009B43E98) HSP 1 Score: 147 bits (370), Expect = 9.560e-32 Identity = 274/1056 (25.95%), Postives = 404/1056 (38.26%), Query Frame = 1
Query: 262 LDMEGYETTPPMSELVAM-DENSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVVVIEFKSASVYDELPENEEKPPRGEGLNKSTTVTLLGVFPKGD-------NPSEEQKRKYEQKVRRNTEKIGAVLVEYSADTGVWVFDTLHWSRYAMDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPSGRIPRAA-TATRGECSAVRQPRRSTKYSMPDTDDEGSVADNASDAGGITGNMAATA--GGRGDGTTQVQAGNVEEDAD-MADVDYAPPATGGATGESKEEYWAEP---RLPTNNLFRSAMDTEQAENLR----VAVGHELVDSR----------GYGGTREAGGGAGYLAGTTLPPERVPILQRS--LWEPL-------VGPRGITPPPVLGDAEDAKAAAAFRPVVSAANSRVLRVLANAWETEDGELKDEAARGVVRAGKIVADSGLRRGRGFRASWGPGGKLVLPGTIGGSKAVGGGVRGSLGRHTVHIR---QFDPMPTASARDAGELYVETLSNHQQFAQPVDCSSDAAETATDEDV---PPRWVLPQRN-NRRPENYKALVRCMHGYAAAHAAI-------ASRGDKDDVSSSPEWVLEQMWRLASAMWGQEEGEGKVQDLPLPGEEPPCGEPDGDIGSFGGSSSGGASPASRREAAVADWLANAVSICVPA----VPKGDDPWQNLLELLSVRRVDDAANLAAKSGLPRLAVVLAAVAAVSGQGGVSWPGAHYASNALAKQVKLWQAGGADARMPQEAFVIYQLL-GRERFRDVQLRGLIGSKRAGPRHRSLDWLRQLGLCLWFGAGAPSSNDGSDGVAEAVEAFE-SLVADKEALPPTARYLREATHHREEDLENACAELRTHYFREEDSGR---DRCVLNRLLALYPPRIAGGXXXASAVVGRTALLAALEPLAVSPDAIDYRHSWHLMTVVEALDVTVVLDRCTAAAVAESLRFQLVIAGLWEWAVYVALSAEEGSGRREATARELVMRYGHGLLAAAAESVDGKRRHLLSVLGIPGAWLYESAAVRAGYD---HKAAL 3237
L+ GY T P M +L M DEN V F V R GYGS+ + V++R +++ +V + K VY P++++KPP+GEGLN+ VTL GV+P +P YE ++ + + K GA +EY +TG WVF+ H+S+Y + DS PS P+ T S P + S+ D G V + SD IT + + GG DG + AG ++ + + YA +G A+ P ++ +LF A D E+ + + + V ++ R GG +A +G+L+ + P P+ S EP GP PP A P + R L LK +G V K + D+GL GR FR WGPG L G S + L + + + F P P S Y L P +S+ E + V P L + E+ LVR G AA H A +GD D V W ++W L A+WG L +EP DI + G R + WL++ + V V KG + + L+ R+ +A LA K G RL+++L+ G+ Y + LA Q+ W D +P+E I+ LL G+ ++ + + LDW R + + LWF P + +D +A+ AF+ S A K A P YL + E L Y EE+S R D C LL LY R L L+PL V+ + +DYR SWHL V++AL + L + S QL AGLW A+++ L + + R A L + + L ESV + R L L IP W++E+ A+RA D H+ AL
Sbjct: 721 LNRVGYYTIPSMEDLTEMVDENGQCWVENFTVGRKGYGSVYFPGEVNVRGLNLDEIVHLRRKEVIVY---PDDKKKPPKGEGLNRRAEVTLDGVWPNDKTTCTQIRSPERLADMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEEEDV-----------------------PSKVDPKKLKTMVPVPPSQQLSPSQQQAQSVVVMDFPGGVPELDSDMADITQSFPTESMLGGEEDG--DLLAGEMDTTGGKLGGLIYAEHDSGAASSHIASTLGINPHTLQIMKASLF--AEDEEEGDMFQDQGVMKVSADVSSPRVVLPGAQGRPSVGGLLQAHFTSGFLSQYSDSPRPPPLSWASPAAVEPSRSSHWGGPGPSSFLLPP-----------RAPEPSIKTVGVRRLG--------GPVPLKKSVTQGKV---KYLMDAGLFAGRSFRVGWGPGWTLAHCGHRLSSLSSK-----QLDQQELTTKADFNFLPKPAGSKPLIESPYKVVLEQLVALEPPAVKASEEQECEASQAVLQHPLEICLKHSTVSSTDESACPLVRPQPGVAALHEYAEWIVDLRAKQGDADPVLGY--WA--EVWTLCEALWGW---------LGPADQEP-------DIETLSGYEQ-----QLERRRTFSTWLSHGATCRVEEEVALVGKGRHT-EAIFSYLTGNRISEACRLAQKEGDHRLSLLLSQAV-----------GSQYCRDLLALQLADWNRTQNDCYLPEERLRIFTLLAGKPVWQSSDSEVNVCTH--------LDWKRSMAVHLWFML--PPTASVADALAKYEAAFQGSCEAGKYACSPLPPYLEK------EQL----------YVEEEESNRPLYDLCF--HLLKLYSDR-------------HYPLQQLLDPLTVTWERLDYRLSWHLWGVLQALHYSH-LSASREGLLHTSYAAQLESAGLWHMAIFILLHIPDHTQRERAVKETLTL---YCPLQETGESVQ-RERFLTERLLIPEQWIHEAKAMRARRDADTHQEAL 1636
BLAST of mRNA_H-paniculata_contig4259.10884.1 vs. uniprot
Match: G3NB37_GASAC (Nuclear pore complex protein Nup98-Nup96 n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3NB37_GASAC) HSP 1 Score: 146 bits (369), Expect = 1.210e-31 Identity = 261/1021 (25.56%), Postives = 374/1021 (36.63%), Query Frame = 1
Query: 262 LDMEGYETTPPMSELVAM-DENSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVVVIEFKSASVYDELPENEEKPPRGEGLNKSTTVTLLGVFPKGDN-------PSEEQKRKYEQKVRRNTEKIGAVLVEYSADTGVWVFDTLHWSRYAMDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPSGRIPRAATAT----RGECSAVRQPRRSTKYSMPDTDDEGSVADNASDAGGITGNMAATAGGRGDGTTQVQAGNVEEDADMADVDYAPPATGGATGESKEEYWAEPRLPTNNLFRSAMDTEQAENLRVAVGHELVDSRGYGGTREAGGGAGYLAGTTLPPERVPIL--------QRSLWEPLVGPRGITPPPVLGDAEDAKAAAAFRPVVSAANSRVLRVLANAWETEDGELKDEAARGVVRAGKIVADSGLRRGRGFRASWGPGGKLVLPGTIGGSKAVGGGVRGSLGRHTVHIRQFDPMPTASARDAGELYVETL----------SNHQQFAQPVD-CSSDAAETATDEDVPPRWVLPQRNNRRPENYKALVRCMHGYAAAHAAIASRGDKDDVSSSPEWVLEQMWRLASAMWGQEEGEGKVQDLPLPGEEPPCGEPDGDIGSFGGSSSGGASPASRREAAVADWLANAVSICVPAVPKGDDPWQNLLELLSVRRVDDAANLAAKSGLPRLAVVLAAVAAVSGQGGVSWPGAHYASNALAKQVKLWQAGGADARMPQEAFVIYQLL-GRERFRDVQLRGLIGSKRAGPRHRSLDWLRQLGLCLWFGAGAPSSNDGSDGVAEAVEAFE-SLVADKEALPPTARYLR-EATHHREEDLENACAELRTHYFREEDSGRDRCVLNRLLALYPPRIAGGXXXASAVVGRTALLAALEPLAVSPDAIDYRHSWHLMTVVEALDVTVVLDRCTAAAVAESLRFQLVIAGLWEWAVYVALSAEEGSGRREATARELVMRYGHGLLAAAAESVDGKRRHLLSVLGIPGAWLYESAAVRAGYD 3222
L+ GY T PPM +L M DEN V F V R GYGSI + V++ +++ VV K VY P+++ KP GEGLN+ VTL GV+P P + YE ++ + + K GA +EY A+TG WVF+ H+S+Y + DS P+A + G + + S P G D +G+MA++ G ++A ED D G++ E W PT S R +V RG R + G L + PP P L + S W L GP PP A PV + R+ +A LK+ G G ++ D+ L GR FR WGPG L G S+AV T F P P S R Y L ++ +P++ C ++ A D P V P+ V +H YA +++R + D +W ++W L A+WG+ D P PG E P G R + + WL A + D + L+ R+ +A LA +G RL+++L+ A G+ Y + L Q+ W D+ +P+E I+ LL G+ ++ + S+ LDW R L + LWF P + +D +A AF+ S K A PP YL E EE+ E +L H LL LY R +L L+PL V+ +DYR SWHL V++AL + L + S QL AGLW AV++ L + R A L + H L ES+ + R L L IP WL+E+ A RA D
Sbjct: 748 LNRVGYYTLPPMEDLADMVDENGDCVVENFTVGRKGYGSIFFPGEVNVAALNLDEVVHFRRKEVIVY---PDDKNKPLEGEGLNRRAEVTLDGVWPNDKTACTQIRCPDRLTEMNYEGRLEKASRKQGARFLEYRAETGSWVFEVAHFSKYGLQDSDEEDDVPLNADPKKLKTMSLPPARLPPPSQQQAAPQAQSPVVVEIPGGVAELDSDMADITQSFPTESMLGDEVPVEHDGVSSSGHMASSLGINPHTLQIMKASLFAEDDDE--------------GDAPREQW-----PTTAEVSSPRLVVPGTQTRPSV-------RGLLQARFSSGLLSQLTDSPRPPLLPPPLAWGSPASKEPSHWAGL-GPSSFLLPP----------RAPEPPVRTVGVRRLGGPVA---------LKESVTLG---KGALLMDAALFAGRSFRVGWGPGWTLAHCGQQLSSQAV-----------TKTDFSFLPKPARSKRLTESSYKVVLEQLVGLEPPLTSRAVLQRPLEICLRNSTVNAADHSACP-LVRPRLG----------VAALHEYAEWIRELSARHGEADALLG-QWA--EVWTLCEALWGRL----GASDDPEPGTEAP----------------GDYEQQLERRRSFSAWLVEAEAALAGKGRHTDA----VFSYLTGNRISEACRLAQSTGDHRLSLLLSQAA-----------GSQYCRDLLGLQLADWSRMQTDSYLPEERLRIFTLLSGKPVWQSSDSVVNVCSE--------LDWKRCLAVHLWFML--PPTASVADALARYEAAFQGSPDGGKYACPPQPPYLEAEQPDMMEEEPERPLHDLCFH----------------LLKLYSDR-------------HYSLQQLLDPLTVTWQRLDYRLSWHLWGVLQALHYSH-LSASRQGLLHASYAAQLESAGLWHMAVFILLHIPDHIQRERAVRAMLTL---HCCLQETPESLR-RERFLTEKLLIPDQWLHEAKATRARRD 1612
BLAST of mRNA_H-paniculata_contig4259.10884.1 vs. uniprot
Match: A0A8C9Y282_SANLU (Nuclear pore complex protein Nup98-Nup96 n=3 Tax=Sander lucioperca TaxID=283035 RepID=A0A8C9Y282_SANLU) HSP 1 Score: 146 bits (368), Expect = 1.620e-31 Identity = 261/1046 (24.95%), Postives = 394/1046 (37.67%), Query Frame = 1
Query: 262 LDMEGYETTPPMSELVAM-DENSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVVVIEFKSASVYDELPENEEKPPRGEGLNKSTTVTLLGVFPKGD-------NPSEEQKRKYEQKVRRNTEKIGAVLVEYSADTGVWVFDTLHWSRYAMDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPSGRIPRAATATRGECSAVRQPRRSTKY-SMPDTDDEGSVADNASDAGGITGNMAATA--GGRGDGTTQVQAGNVEEDADMADVDYAPPAT-----GGATGESKEEYWAEPRLPTNNLFRSAMDTEQAENLRVAVGHELVDSRGYGGTREAGGGAGYLAGTTLPPERVPILQRSLWEPLVGPRGITPPPVLGDAEDAKAAAAFRPVVSAANSRV----LRVLANAWETEDGELKDEAARGVVRAGKIVADSGLRRGRGFRASWGPGGKLVLPGTIGGSKAVGGGVRGSLGRHTVHIRQFDPMPTASARDAGELYVETLSNHQQFAQPVDCSSDAAETATDEDVPPRWVLPQRNNRRPENYKALVRCMHGYAAAHAAIASRGDKDDVSSSP---------------EWVLE--------QMWRLASAMWGQEEGEGKVQDLPLPGEEPPCGEPDGDIGSFGGSSSGGASPASRREAAVADWLANAVSICVP---AVPKGDDPWQNLLELLSVRRVDDAANLAAKSGLPRLAVVLAAVAAVSGQGGVSWPGAHYASNALAKQVKLWQAGGADARMPQEAFVIYQLL-GRERFRDVQLRGLIGSKRAGPRHRSLDWLRQLGLCLWFGAGAPSSNDGSDGVAEAVEAFE-SLVADKEALPPTARYLREATHHREEDLENACAELRTHYFREEDSGR---DRCVLNRLLALYPPRIAGGXXXASAVVGRTALLAALEPLAVSPDAIDYRHSWHLMTVVEALDVTVVLDRCTAAAVAESLRFQLVIAGLWEWAVYVALSAEEGSGRREATARELVMRYGHGLLAAAAESVDGKRRHLLSVLGIPGAWLYESAAVRAGYD---HKAAL 3237
L+ GY T P M +L M DEN V F + R GYGSI + V++ +++ +V K VY P+++ KPP+GEGLN+ VTL GV+P +P + YE ++ + + K GA +EY +TG WVF+ H+S+Y + DS P + T S ++QP S++ S D G VA+ SD IT + + GG D T + V + MA P T E +EE +++F+S + A + V + G G GG L T + S PL+ P P + + A P SR +R + LK+ +G G ++ D+ L GR FR WGPG L H P D EL T +++ +P A + + P + VL Q + E +A+++ H+ + D D S+ P EW++E ++W L A+WG+ + D+ +P E R + WL+ + V A+ + + L+ R+ +A LA K G RL+++L+ G+ Y + LA QV W D+ +P+E I+ LL G+ ++ + S+ LDW R + + LWF P + +D +A AF+ S A K A P YL EA +D E EE+S R D C LL LY R +L L+PL V+ + +DYR SWHL V++AL + L + S QL AGLW+ AV++ L + + R A L + H L ESV + R L L IP W++E+ A RA D H+ AL
Sbjct: 703 LNRVGYYTIPSMEDLAEMVDENGKCVVDNFTIGRKGYGSIFFPGEVNVTGLNLDEIVHFRRKEVIVY---PDDKTKPPQGEGLNRRAEVTLDGVWPNDKTACTQIRSPERLTEMNYEGRLEKASRKQGARFLEYRTETGSWVFEVAHFSKYGLQDSDEEDDVP----------------------PKADPKKLKTMMPLPPSRLQQPLPSSQQQSTVVVDLPGGVAELDSDMADITQSFPTESMLGGEEDSLTYAELNGVSASSHMASSLGINPHTLQIMKASLFAEDEEE---------SDMFQS----QGAMKISTDVSSPRLVLPGSQGRPSVGG----LLQTRFTSGLFSQMSDSPRPPLLPPSLSRGSPAAAEQSRSLHWAGPAPSSFMLPSRTPEPSVRTVGARRLGGPVPLKESVTQG---KGSLLMDAALFAGRSFRVGWGPGWTLA------------------------HCGHRLSSPPTKQLDRQEL---TKTDYSFLPKP------ARKPLIES--PYKVVLEQLWRKEEEESQAVLQRPLEICLKHSIV----DTTDASACPLVRPQPGVAALHEYAEWIVELALLGYWAEVWTLCEALWGRLGPADQEPDVEMPSEY---------------------EQQLERRRTFSAWLSRGATCRVEEEVALAGKGRHTEAIFSYLTGNRISEACRLAQKEGDHRLSLLLSQAM-----------GSQYCRDLLALQVADWNRMQTDSYLPEERLRIFTLLAGKPVWQSSDSVVNVCSE--------LDWKRCVAVHLWFML--PPTASVADALARYEAAFQGSCEAGKYACAPLPPYL-EAVQPDMDDEE------------EEESKRPLHDLCF--HLLKLYSDR-------------HYSLQQLLDPLTVTWERLDYRLSWHLWGVLQALHYSH-LSASRQGLLHASYAAQLESAGLWDMAVFILLHIPDHTQRERAVREMLTL---HCPLQETDESVR-RERFLTEKLLIPEQWIHEAKATRARRDSDRHQEAL 1589
BLAST of mRNA_H-paniculata_contig4259.10884.1 vs. uniprot
Match: A0A8C2XCP8_CYCLU (Nuclear pore complex protein Nup98-Nup96 n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C2XCP8_CYCLU) HSP 1 Score: 146 bits (368), Expect = 1.640e-31 Identity = 260/1032 (25.19%), Postives = 381/1032 (36.92%), Query Frame = 1
Query: 262 LDMEGYETTPPMSELVAM-DENSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVVVIEFKSASVYDELPENEEKPPRGEGLNKSTTVTLLGVFPKGD-------NPSEEQKRKYEQKVRRNTEKIGAVLVEYSADTGVWVFDTLHWSRYAMDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPSGRIPRAATATRGECSAVRQ---PRRSTKYSMPDTDDEGSVADNASDAGGITGNMAATAGGRGDGTTQVQAGNVEEDADMADVDYAPPATGGATGESKEEYWAEPRLPTN--------NLFRSAMDTEQAEN---------LRVAVGHELVDSRG------YGGTREAGGGAGYLAGTTLPPERVPILQRSLWEPLVGPRGITPPPVLGDAEDAKAAAAFRPVVSAANSRVLRVLANAWETEDGELKDEAARGVVRAGKIVADSGLRRGRGFRASWGPGGKLVLPGTIGGSKAVGGGVRGSLGRHTVHIRQFDPMPTASARDAGELYVETLSNHQQFAQPVDCSSDAAETATDEDVPPRWVLPQRNNRRPENYKALVRCMHGYAAAHA----AIASRGDKDDVSSSPEWVLEQMWRLASAMWGQEEGEGKVQDLPLPGEEPPCGEPDGDIGSFGGSSSGGASPASRREAAVADWL----ANAVSICVPAVPKGDDPWQNLLELLSVRRVDDAANLAAKSGLPRLAVVLAAVAAVSGQGGVSWPGAHYASNALAKQVKLWQAGGADARMPQEAFVIYQLL-GRERFRDVQLRGLIGSKRAGPRHRSLDWLRQLGLCLWFGAGAPSSNDGSDGVAEAVEAFE-SLVADKEALPPTARYLR-EATHHREEDLENACAELRTHYFREEDSGRDRCVLNRLLALYPPRIAGGXXXASAVVGRTALLAALEPLAVSPDAIDYRHSWHLMTVVEALDVTVVLDRCTAAAVAESLRFQLVIAGLWEWAVYVALSAEEGSGRREATARELVMRYGHGLLAAAAESVDGKRRHLLSVLGIPGAWLYESAAVRAGYD 3222
L+ GY T P + +L M DEN V F V R GYGSI + V + ++I +V K VY P+++ KP GEGLN+ VTL GV+P +P + YE ++ + + K GA +EY A+TG WVF+ H+S+Y + DS P ++ R + +Q P+ + +P G VA+ SD IT N ++D D+D+ GG + A R+ ++ + ++++ E E ++V V + G GG +A +G + + P P+ + S GP PP P +S V R+ LK+ G G ++ D+GL GR FR WGPG L G GS A R T+ F P P S Y L PV + A + + + + LVR G AA H + GD + + ++W L A+WG+ G ++ P EPP G R + WL A V V KG + L+ RV +A LA K G RL+++L+ A G+ Y + LA Q+ W D+ +P+E I+ LL G+ ++ + S+ LDW R + + LWF P + +D +A AF+ S K A P YL E EE+ E A ++ H D C LL LY R +L L+PLAV+ +DYR SWHL V++AL L + S QL AGLW AV++ L + + R A L + H L ES+ + R L L IP WL+E+ A RA D
Sbjct: 729 LNRVGYYTIPSLDDLSEMVDENGACVVDNFTVGRKGYGSIFFPGEVSVTALNIDEIVHFRRKEVIVY---PDDKNKPLEGEGLNRRAEVTLDGVWPNDKTACTQIRSPERLTEMNYEGRLEKASRKQGARFLEYRAETGSWVFEVAHFSKYGLQDSDEEEDVPLKAD------------------PKKLKTMSSLPARLQLPPSQQQVAPQAQVEQPLP-----GGVAELDSDMADITQN--------------------DDDLPACDLDWTNGKLGGLIPAENDGVSASGRMASSLGINPHTLQIMKASLFAEDEEESDMIQDQRVMKVDVSSPRIVVPGAQSRPSVGGLLQARFTSGLFSQLSDSPRPPPLPRGS-----PGPPSFLLPP-------------RTPELSVRTVGVRRLGGPV------ALKESVTMG---KGGLLMDAGLFAGRSFRVGWGPGWTLAHCGQRLGSPAA---KRPDRHERTITDFSFLPKPARSKPLIESPYKVVLEQLAGLDPPVKTGEEQQSQAVLQRPLEICLKHCTVDTSDASACPLVRPQPGVAALHEYAEWIVELSGDLTVLPPALLGYWSEVWTLCEALWGRM-GPAHLE----PDAEPP----------------GAYEQQLERRRTFSAWLSRGAARRVEEEVALATKGRHA-DAVFSYLTGNRVSEACRLAQKEGDHRLSLLLSQAA-----------GSQYCRDLLALQLTDWNRMQTDSYLPEERLRIFTLLSGKPVWQSSDSVVNVCSE--------LDWKRCVAVHLWFML--PPTASVADALARYEAAFQGSCEGGKYACAPLPAYLEAEQADMMEEEEEEAESKRPLH---------DLCF--HLLKLYSDR-------------HYSLQQLLDPLAVTWQRLDYRLSWHLWGVLQALHYGH-LSAARQGLLHTSYAAQLESAGLWHMAVFILLHIADHTQRERAVREMLTL---HCRLQETDESLR-RERFLTERLLIPDQWLHEAKATRARRD 1612 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4259.10884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4259.10884.1 >prot_H-paniculata_contig4259.10884.1 ID=prot_H-paniculata_contig4259.10884.1|Name=mRNA_H-paniculata_contig4259.10884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1244bp MAGGLSSPDGSTRRSGGGGGRSSSALADIVSPPPSGSVGTDVRAAAGGGGback to top mRNA from alignment at H-paniculata_contig4259:10219..16101- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4259.10884.1 ID=mRNA_H-paniculata_contig4259.10884.1|Name=mRNA_H-paniculata_contig4259.10884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5883bp|location=Sequence derived from alignment at H-paniculata_contig4259:10219..16101- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4259:10219..16101- >mRNA_H-paniculata_contig4259.10884.1 ID=mRNA_H-paniculata_contig4259.10884.1|Name=mRNA_H-paniculata_contig4259.10884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=7464bp|location=Sequence derived from alignment at H-paniculata_contig4259:10219..16101- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |